TCONS_00020985 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020985
Unique NameTCONS_00020985
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2728

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020985 ID=TCONS_00020985|Name=TCONS_00020985|organism=Clytia hemisphaerica|type=transcript|length=2728bp
TCGGTGATCACGACTTTTAGCGACAGATTTAACGAGAACGACAAACCTGG
AGACACTTATAAAAGGAAAGGTCCAGCAGAGGATAATCATAAAGAATTTT
GGATAGGTGAAAACCAGCTTGTTGTTATATTTTGTTGATGGTAATCGGAG
ATTTTGGTTTTAACACAAGATTTCCAATAGAGACGTGTGGTCCGCACTAA
AGGAAGCAGCACTTCAGTAAAATAAACGAACAAAAAAGTGGGTTGGCAAA
AAAACCAATTTTGGTCGTCAGTAGAAAAAACCTAACTAAGAGAAGAAGGG
TTAGGATCGCACGTTAGCCTACCAAGCAGTCAGCAATACGTAGAGATTTC
GATGTCAAAACAGACGCGTCctcaatcatcaatcagtgaAGAGAGAAGAG
AgggagagaagaaaaaaaacaaaagcatAAATCATTTTGGATTTCAGTTT
TGTGGTCGTTCCAACCGTTCACCTGATACCTGTGTTGTGATCGGCAAAAA
GATAAATACACACAAACACATCTATAAAAAGGACACTATCACTACCAACA
TgctcaaatcacaaaagaaatcaCGCTGCAAAGACAACATGATTCTAACC
ATCAAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTGCTGTCGT
CCTAACATCCAGACGTAACATGCAACAAACTTTATTCAAAGATGAAAAAC
AAATCACCACAAACACTTTAAACAATGTTGTCGTGGTACCCCCTCAAGCA
AATCGAAACAAAAAATCGTTCACGTACCAAGGCCTCGGAGGACCCTGGCA
AAGCATCAGATTACCTACAGACATTGTGCCGCAACATTACGACTTAGATT
TGAACGTGGACATGGACAAGGAGACGTATATCGGCGTCGTCAATATCTTG
GTTAATGTTACCGGGGACAGCGTAAGGTATATTTTACTTCATAAGGTCAA
CATCAGCATCACGCAAATGACAATCAACGACATTAACGGTCACAAATTAA
ACGTTTTACAGACATTCGAGAACACTTTATATGAATATCTCGTCATTGAG
ATGAGCTATCCTCTGATAAAAGGAACACAACTGAAGATTGGGCTGAACTT
CCAAGCTAGCCTGCGCACTGACTTGACAGGCTTCTTCATTACACGTAAAG
GAAACAGTAAGATGGCGGCCACCTTCTTGTCACCTGTCAGTACTCGCAAA
TTCTTCCCATGCTTTGATGAACCTGTCTTCAAGGCTACCTTTTCCATAAA
AGTCACGCATAGCAGCCAATACAAAGCTCTCTCAAATATGCCGGTTACCA
CTCAAACTACAGTGAAGAGCCAAACGAAAACtgaattcaaaaagtctctt
cCGATGTCGACATACAATTTAGGACTTCTTCTCGCTGACGATACATACCA
AGTCAAAGAAAAGCGTATTGTTGGTTCTTTGACCATTCAAATTTGGGACT
TCAAAACGAACTCTGGTTGGAAAAGCGAGACTGATGATATAGTAAAACTT
TTGGATTATTATGAGCGACATTTCTTTCAAGTACCATTCCCTCTTGAGAA
ATTAGACGTTGCCGTGATACCTGATTACATCCCAGGAGCAATGGAGACCT
GGGGCCTAATGATGTTTCGTGTGGGGTTAGATAAATATCATTTGGTGGCT
CATGAGATTGCCCATCAATGGTTTGGTAATCTGGTCACTATGGAGTTTTG
GGATGTTGCTTGGATCAAAGAAGGGTTCGCACAATATCTTGCGACGGTCG
TTGGCGACACCGTCAGACAAACGCAACGCTACAAAAACCAATTCTTCTCA
GGAATGTCAAGAGCTTTACCGATGGATTCCTACGCTACTTCTCATCCAAT
TGTTCCCGAGATTAACACGCCGACAGACATACGAAACGTCTATGATAATA
TCGTGTACTATAAAGGTGAACCGGTCGTTCATATTTTGGCCACACTTGTT
GGGATGACGAACTTTCGCAAAGGCATGAAACGCTTtttacaacaatacaa
atacaaaaatGCAGAACAAGACGACTTATTCAGAGTTTTTGGcGATATTA
GTGGCATCGATGTCAAATCTTTCATGGATCCATGGCTCTTACAAATGGGC
TACCCACTTTTGAGCGTCAACCGATTGAATAACACCCACATTGAAGTTGA
ACAAGAGAGATTTTCAATGGATGCACCCAATACTGCACTTAAAGCCTCGC
CCTTCAACTATCAGTGGCCTATCATCGTTACCTATCGAGACCTAAATGAC
GTCAAATCAAAACAAGTCATCATGACAGGCAAAAAAGCCATCCTGCCAAT
CCCCGATGGTTCCGTATTAAATCCGGACCATATGCAATATTACCGGATAC
GATTTTCAAAGAACAGCACAGCTCAGTTGAAAAAGCAACTCATCCACAAC
CAAAGTAGATTCACTGTCAACGATCGAATTGGAATCATCTCTGACATGTT
TTTCAATTTGCAAGCAAGGAAAATGAAACTAGAACAAGTTATTGACTTCC
TGGAATATTTCAAgCATGAAAGAGAGCACTCTACATGGACAGAGGGAATT
AAAATCTTGACCAAAGTACACGACTTGATAAAACACGATGATAGCTTACG
TAACTTATGGGATAAGAAAATCATCCAACCTTACGTCGAAAGAGCTTACT
CGCTTTTCCAAAGCAAAGGTGCAGTCATACGCGATGCTTGTTATTTGAAT
CATACACAAGCCATCCAGGATGCCGAGC
Run BLAST on NCBI

protein sequence of TCONS_00020985-protein

>TCONS_00020985-protein ID=TCONS_00020985-protein|Name=TCONS_00020985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=792bp
MSKQTRPQSSISEERREGEKKKNKSINHFGFQFCGRSNRSPDTCVVIGKK
INTHKHIYKKDTITTNMLKSQKKSRCKDNMILTIKIFLGLAVLAGIGAVV
LTSRRNMQQTLFKDEKQITTNTLNNVVVVPPQANRNKKSFTYQGLGGPWQ
SIRLPTDIVPQHYDLDLNVDMDKETYIGVVNILVNVTGDSVRYILLHKVN
ISITQMTINDINGHKLNVLQTFENTLYEYLVIEMSYPLIKGTQLKIGLNF
QASLRTDLTGFFITRKGNSKMAATFLSPVSTRKFFPCFDEPVFKATFSIK
VTHSSQYKALSNMPVTTQTTVKSQTKTEFKKSLPMSTYNLGLLLADDTYQ
VKEKRIVGSLTIQIWDFKTNSGWKSETDDIVKLLDYYERHFFQVPFPLEK
LDVAVIPDYIPGAMETWGLMMFRVGLDKYHLVAHEIAHQWFGNLVTMEFW
DVAWIKEGFAQYLATVVGDTVRQTQRYKNQFFSGMSRALPMDSYATSHPI
VPEINTPTDIRNVYDNIVYYKGEPVVHILATLVGMTNFRKGMKRFLQQYK
YKNAEQDDLFRVFGDISGIDVKSFMDPWLLQMGYPLLSVNRLNNTHIEVE
QERFSMDAPNTALKASPFNYQWPIIVTYRDLNDVKSKQVIMTGKKAILPI
PDGSVLNPDHMQYYRIRFSKNSTAQLKKQLIHNQSRFTVNDRIGIISDMF
FNLQARKMKLEQVIDFLEYFKHEREHSTWTEGIKILTKVHDLIKHDDSLR
NLWDKKIIQPYVERAYSLFQSKGAVIRDACYLNHTQAIQDAE
Run BLAST on NCBI

transcript from alignment at sc0000376:166839..171290+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020985 ID=TCONS_00020985|Name=TCONS_00020985|organism=Clytia hemisphaerica|type=transcript|length=4452bp|location=Sequence derived from alignment at sc0000376:166839..171290+ (Clytia hemisphaerica)
TCGGTGATCACGACTTTTAGCGACAGATTTAACGAGAACGACAAACCTGG
AGACACTTATAAAAGGAAAGGTCCAGCAGAGGATAATCATAAAGAATTTT
GGATAGGTGAAAACCAGCTTGTTGTTATATTTTGTTGATGGTAATCGGAG
ATTTTGGTTTTAACACAAGATTTCCAATAGAGACGTGTGGTCCGCACTAA
AGGAAGCAGCACTTCAGTAAAATAAACGAACAAAAAAGTGGGTTGGCAAA
AAAACCAATTTTGGTCGTCAGTAGAAAAAACCTAACTAAGAGAAGAAGGG
TTAGGATCGCACGTTAGCCTACCAAGCAGTCAGCAATACGTAGAGATTTC
GATGTCAAAACAGACGCGTCctcaatcatcaatcagtgaAGAGAGAAGAG
AgggagagaagaaaaaaaacaaaagcatAAATCATTTTGGATTTCAGTTT
TGTGGTCGTTCCAACCGTTCACCTGATACCTGTGTTGTGATCGGCAAAAA
GATAAATACACACAAACACATCTATAAAAAGGACACTATCACTACCAACA
TgctcaaatcacaaaagaaatcaCGCTGCAAAGACAACATGATTCTAACC
ATCAAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTGCTGTCGT
CCTAACATCANAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTG
CTGTCGTCTTAACATCCAGACGTAACATGCAACAAACTTTATTCAAAGAT
GAAAAACAAATCACCACAAACACTTTAAACAATGTTGTCGTGGTACCCCC
TCAAGCAAATCGAAACAAAAAATCGTTCACGTACCAAGGCCTCGGAGGAC
CCTGGCAAAGCATCAGATTACCTACAGACATTGTGCCGCAACATTACGAC
TTAGATTTGAACGTGGACATGGACAAGGAGACGTATATCGGCGTCGTCAA
TATCTTGGTTAATGTTACCGGGGACAGCGTAAGGTATATTTTACTTCATA
AGGTCAACATCAGCATCACGCAAATGACAATCAACGACATTAACGGTCAC
AAATTAAACGTTTTACAGACATTCGAGAACACTTTATATGAATATCTCGT
CATTGAGATGAGCTATCCTCTGATAAAAGGAACACAACTGAAGATTGGGC
TGAACTTCCAAGCTAGCCTGCGCACTGACTTGACAGGCTTCTTCATTACA
CGTAAAGGAAACAGTAAGATGGCGGCCACCTTCTTGTCACCTGTCAGTAC
TCGCAAATTCTTCCCATGCTTTGATGAACCTGTCTTCAAGGCTACCTTTT
CCATAAAAGTCACGCATAGCAGCCAATACAAAGCTCTCTCAAATATGCCG
GTTACCACTCAAACTACAGTGAAGAGCCAAACGAAAACtgaattcaaaaa
gtctcttcCGATGTCGACATACAATTTAGGACTTCTTCTCGCTGACGATA
CATACCAAGTCAAAGAAAAGCGTATTGTTGGTTCTTTGACCATTCAAATT
TGGGACTTCAAAACGAACTCTGGTTGGAAAAGCGAGACTGATGATATAGT
AAAACTTTTGGATTATTATGAGCGACATTTCTTTCAAGTACCATTCCCTC
TTGAGAAATTAGACGTTGCCGTGATACCTGATTACATCCCAGGAGCAATG
GAGACCTGGGGCCTAATGATGTTTCGTGTGGGGTTAGATAAATATCATTT
GGTGGCTCATGAGATTGCCCATCAATGGTTTGGTAATCTGGTCACTATGG
AGTTTTGGGATGTTGCTTGGATCAAAGAAGGTGAGTGTATTtcttcatct
tgattttttcttcattttcctaaTTTCATATTAAAAAAAGCTTGGAGCTA
AACCCATAGGGAAGCTTTTAGCGACTACTGAAGCCTAAAAACAACACTTC
CCATACAAAAGGTTGAAATCAATCTTCTCAAATTGTTTTAGGGTTTGCAC
AATATCTTGCGACGGTCGTTGGCGACACCGTCAGACAAACGCAACGCTAT
AAAAACCAATTCTTCTCAGGAATGTCAAGAGCTTTACCGATGGATTCCTA
CGCTACTTCTCATCCAATTGTTCCCGAGATTAACACGCCGACAGACATAC
GAAACGTCTATGATAATATCGTGTACTATAAAGGTGAACCGGTCGTTCAT
ATTTTGGCCACGCTTGTTGGGATGACGAACTTTCGCAAAGGCATGAAACG
CTTtttacaacaatacaaatacaaaaatgcaaaacaagacgacttattCA
NACGAAAACtgaattcaaaaagtctcttcCGATGTCGACATACAATTTAG
GACTTCTTCTCGCTGACGATACATACCAAGTCAAAGAAAAGCGTATTGTT
GGTTCTTTGACCATTCAAATTTGGGACTTCAAAACGAACTCTGGTTGGAA
AAGCGAGACTGATGATATAGTAAAACTTTTGGATTATTATGAGCGACATT
TCTTTCAAGTACCATTCCCTCTTGAGAAATTAGACGTTGCCGTGATACCT
GATTACATCCCAGGAGCAATGGAGACCTGGGGCCTAATGATGTTTCGTGT
GGGGTTAGATAAATATCATTTGGTGGCTCATGAGATTGCCCATCAATGGT
TTGGTAATCTGGTCACTATGGAGTTTTGGGATGTTGCTTGGATCAAAGAA
GGTGAGTGTATTtcttcatcttgattttttcttcattttcctaaTTTCAT
ATTAAAAAAAGCTTAGAGCTAAACCCATAGGGAAGCTTTTAGCGACTACT
GAAGCCTAAAAACAACACTTCTCATACAAAAGGTTGAAATCAATCTTCTC
AAATTGTTTTCAGGGTTCGCACAATATCTTGCGACGGTCGTTGGCGACAC
CGTCAGACAAACGCAACGCTACAAAAACCAATTCTTCTCAGGAATGTCAA
GAGCTTTACCGATGGATTCCTACGCTACTTCTCATCCAATTGTTCCCGAG
ATTAACACGCCGACAGACATACGAAACGTCTATGATAATATCGTGTACTA
TAAAGGTGAACCGGTCGTTCATATTTTGGCCACACTTGTTGGGATGACGA
ACTTTCGCAAAGGCATGAAACGCTTtttacaacaatacaaatacaaaaat
GCAGAACAAGACGACTTATTCAGAGTTTTTGGGTAAGGATATATCTCGAT
TCCCTAAATTAAATGTCAGACATTTAGTCACACTTTTATTCTCTCGTTAT
ATGTTTTTTAACTGTAAGTATGTGAGAGAAAAATACCCCATGTAATTCGA
TATTATCAAGAGAACGAAAAAAGAGGGCTCTTTAGCTCTCACATGTCAAA
AAAGACTGCTTGAATTTAATACCATTTTTTAAGAGGCTGTCAAAATAATC
GgtgtttatttttcaataattttgtattctttcaatttattcagcGATAT
TAGTGGCATCGATGTCAAATCTTTCATGGATCCATGGCTCTTACAAATGG
GCTACCCACTTTTGAGCGTCAACCGATTGAATAACACCCACATTGAAGTT
GAACAAGAGAGATTTTCAATGGATGCACCCAATACTGGTacgtaaacaaa
aaaaaattaaaaagatagttTCACGTACGAAGAACTCTTAGATTTTCCct
tcaaaatgttgaaatacaAGAGAAGTGCCACTTCAAATGAGACGCAGGCA
AAATTCCAAAATAATTTCACAATAATCAGTCAATTTTCCATTCTATCATT
TGTAGCACTTAAAGCCTCGCCCTTCAACTATCAGTGGCCTATCATCGTTA
CCTATCGAGACCTAAATGACGTCAAATCAAAACAAGTCATCATGACAGGC
AAAAAAGCCATCCTGCCAATCCCCGATGGTTCCGTATTAAATCCGGACCA
TATGCAATATTACCGGATACGATTTTCAAAGAACAGCACAGCTCAGTTGA
AAAAGCAACTCATCCACAACCAAAGTAGATTCACTGTCAACGATCGAATT
GGAATCATCTCTGACATGTTTTTCAATTTGCAAGCAAGGAAAATGAAACT
AGAACAAGTTATTGACTTCCTGGAATATTTCAAggtatgaatattttttt
aaattcaaaagtttCCACTTTTTCGGCCCCTTTTACGCTAGCCTTGTGAC
AGAATTAGGGTCAACGTAAACAAATGACCACCGTCCTTTATAGGGCGTAA
GAGGGCTGATATATGCtgattttcaaacaatttcaacaaaaaataaacag
taaaaataatggaaagaTTTTCACAATTAATTTTTTAGCATGAAAGAGAG
CACTCTACATGGACAGAGGGAATTAAAATCTTGACCAAAGTACACGACTT
GATAAAACACGATGATAGCTTACGTAACTTATGGGATAAGAAAATCATCC
AACCTTACGTCGAAAGAGCTTACTCGCTTTTCCAAAGCAAAGGTGCAGTC
ATACGCGATGCTTGTTATTTGAATCATACACAAGCCATCCAGGATGCCGA
GC

Coding sequence (CDS) from alignment at sc0000376:166839..171290+

>TCONS_00020985 ID=TCONS_00020985|Name=TCONS_00020985|organism=Clytia hemisphaerica|type=CDS|length=14256bp|location=Sequence derived from alignment at sc0000376:166839..171290+ (Clytia hemisphaerica)
ATGTCAAAACAGACGCGTCctcaatcatcaatcagtgaAGAGAGAAGAGA
gggagagaagaaaaaaaacaaaagcatAAATCATTTTGGATTTCAGTTTT
GTGGTCGTTCCAACCGTTCACCTGATACCTGTGTTGTGATCGGCAAAAAG
ATAAATACACACAAACACATCTATAAAAAGGACACTATCACTACCAACAT
gctcaaatcacaaaagaaatcaCGCTGCAAAGACAACATGATTCTAACCA
TCAAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTGCTGTCGTC
CTAACATCCAGACGTAACATGCAACAAACTTTATTCAAAGATGAAAAACA
AATCACCACAAACACTTTAAACAATGTTGTCGTGGTACCCCCTCAAGCAA
ATCGAAACAAAAAATCGTTCACGTACCAAGGCCTCGGAGGACCCTGGCAA
AGCATCAGATTACCTACAGACATTGTGCCGCAACATTACGACTTAGATTT
GAACGTGGACATGGACAAGGAGACGTATATCGGCGTCGTCAATATCTTGG
TTAATGTTACCGGGGACAGCGTAAGGTATATTTTACTTCATAAGGTCAAC
ATCAGCATCACGCAAATGACAATCAACGACATTAACGGTCACAAATTAAA
CGTTTTACAGACATTCGAGAACACTTTATATGAATATCTCGTCATTGAGA
TGAGCTATCCTCTGATAAAAGGAACACAACTGAAGATTGGGCTGAACTTC
CAAGCTAGCCTGCGCACTGACTTGACAGGCTTCTTCATTACACGTAAAGG
AAACAGTAAGATGGCGGCCACCTTCTTGTCACCTGTCAGTACTCGCAAAT
TCTTCCCATGCTTTGATGAACCTGTCTTCAAGGCTACCTTTTCCATAAAA
GTCACGCATAGCAGCCAATACAAAGCTCTCTCAAATATGCCGGTTACCAC
TCAAACTACAGTGAAGAGCCAAACGAAAACtgaattcaaaaagtctcttc
CGATGTCGACATACAATTTAGGACTTCTTCTCGCTGACGATACATACCAA
GTCAAAGAAAAGCGTATTGTTGGTTCTTTGACCATTCAAATTTGGGACTT
CAAAACGAACTCTGGTTGGAAAAGCGAGACTGATGATATAGTAAAACTTT
TGGATTATTATGAGCGACATTTCTTTCAAGTACCATTCCCTCTTGAGAAA
TTAGACGTTGCCGTGATACCTGATTACATCCCAGGAGCAATGGAGACCTG
GGGCCTAATGATGTTTCGTGTGGGGTTAGATAAATATCATTTGGTGGCTC
ATGAGATTGCCCATCAATGGTTTGGTAATCTGGTCACTATGGAGTTTTGG
GATGTTGCTTGGATCAAAGAAGGGTTCGCACAATATCTTGCGACGGTCGT
TGGCGACACCGTCAGACAAACGCAACGCTACAAAAACCAATTCTTCTCAG
GAATGTCAAGAGCTTTACCGATGGATTCCTACGCTACTTCTCATCCAATT
GTTCCCGAGATTAACACGCCGACAGACATACGAAACGTCTATGATAATAT
CGTGTACTATAAAGGTGAACCGGTCGTTCATATTTTGGCCACACTTGTTG
GGATGACGAACTTTCGCAAAGGCATGAAACGCTTtttacaacaatacaaa
tacaaaaatGCAGAACAAGACGACTTATTCAGAGTTTTTGGcGATATTAG
TGGCATCGATGTCAAATCTTTCATGGATCCATGGCTCTTACAAATGGGCT
ACCCACTTTTGAGCGTCAACCGATTGAATAACACCCACATTGAAGTTGAA
CAAGAGAGATTTTCAATGGATGCACCCAATACTGCACTTAAAGCCTCGCC
CTTCAACTATCAGTGGCCTATCATCGTTACCTATCGAGACCTAAATGACG
TCAAATCAAAACAAGTCATCATGACAGGCAAAAAAGCCATCCTGCCAATC
CCCGATGGTTCCGTATTAAATCCGGACCATATGCAATATTACCGGATACG
ATTTTCAAAGAACAGCACAGCTCAGTTGAAAAAGCAACTCATCCACAACC
AAAGTAGATTCACTGTCAACGATCGAATTGGAATCATCTCTGACATGTTT
TTCAATTTGCAAGCAAGGAAAATGAAACTAGAACAAGTTATTGACTTCCT
GGAATATTTCAAgCATGAAAGAGAGCACTCTACATGGACAGAGGGAATTA
AAATCTTGACCAAAGTACACGACTTGATAAAACACGATGATAGCTTACGT
AACTTATGGGATAAGAAAATCATCCAACCTTACGTCGAAAGAGCTTACTC
GCTTTTCCAAAGCAAAGGTGCAGTCATACGCGATGCTTGTTATTTGAATC
ATACACAAGCCATCCAGGATGCCGAGATGTCAAAACAGACGCGTCctcaa
tcatcaatcagtgaAGAGAGAAGAGAgggagagaagaaaaaaaacaaaag
catAAATCATTTTGGATTTCAGTTTTGTGGTCGTTCCAACCGTTCACCTG
ATACCTGTGTTGTGATCGGCAAAAAGATAAATACACACAAACACATCTAT
AAAAAGGACACTATCACTACCAACATgctcaaatcacaaaagaaatcaCG
CTGCAAAGACAACATGATTCTAACCATCAAAATTTTCTTAGGACTAGCTG
TTCTTGCTGGAATAGGTGCTGTCGTCCTAACATCCAGACGTAACATGCAA
CAAACTTTATTCAAAGATGAAAAACAAATCACCACAAACACTTTAAACAA
TGTTGTCGTGGTACCCCCTCAAGCAAATCGAAACAAAAAATCGTTCACGT
ACCAAGGCCTCGGAGGACCCTGGCAAAGCATCAGATTACCTACAGACATT
GTGCCGCAACATTACGACTTAGATTTGAACGTGGACATGGACAAGGAGAC
GTATATCGGCGTCGTCAATATCTTGGTTAATGTTACCGGGGACAGCGTAA
GGTATATTTTACTTCATAAGGTCAACATCAGCATCACGCAAATGACAATC
AACGACATTAACGGTCACAAATTAAACGTTTTACAGACATTCGAGAACAC
TTTATATGAATATCTCGTCATTGAGATGAGCTATCCTCTGATAAAAGGAA
CACAACTGAAGATTGGGCTGAACTTCCAAGCTAGCCTGCGCACTGACTTG
ACAGGCTTCTTCATTACACGTAAAGGAAACAGTAAGATGGCGGCCACCTT
CTTGTCACCTGTCAGTACTCGCAAATTCTTCCCATGCTTTGATGAACCTG
TCTTCAAGGCTACCTTTTCCATAAAAGTCACGCATAGCAGCCAATACAAA
GCTCTCTCAAATATGCCGGTTACCACTCAAACTACAGTGAAGAGCCAAAC
GAAAACtgaattcaaaaagtctcttcCGATGTCGACATACAATTTAGGAC
TTCTTCTCGCTGACGATACATACCAAGTCAAAGAAAAGCGTATTGTTGGT
TCTTTGACCATTCAAATTTGGGACTTCAAAACGAACTCTGGTTGGAAAAG
CGAGACTGATGATATAGTAAAACTTTTGGATTATTATGAGCGACATTTCT
TTCAAGTACCATTCCCTCTTGAGAAATTAGACGTTGCCGTGATACCTGAT
TACATCCCAGGAGCAATGGAGACCTGGGGCCTAATGATGTTTCGTGTGGG
GTTAGATAAATATCATTTGGTGGCTCATGAGATTGCCCATCAATGGTTTG
GTAATCTGGTCACTATGGAGTTTTGGGATGTTGCTTGGATCAAAGAAGGG
TTCGCACAATATCTTGCGACGGTCGTTGGCGACACCGTCAGACAAACGCA
ACGCTACAAAAACCAATTCTTCTCAGGAATGTCAAGAGCTTTACCGATGG
ATTCCTACGCTACTTCTCATCCAATTGTTCCCGAGATTAACACGCCGACA
GACATACGAAACGTCTATGATAATATCGTGTACTATAAAGGTGAACCGGT
CGTTCATATTTTGGCCACACTTGTTGGGATGACGAACTTTCGCAAAGGCA
TGAAACGCTTtttacaacaatacaaatacaaaaatGCAGAACAAGACGAC
TTATTCAGAGTTTTTGGcGATATTAGTGGCATCGATGTCAAATCTTTCAT
GGATCCATGGCTCTTACAAATGGGCTACCCACTTTTGAGCGTCAACCGAT
TGAATAACACCCACATTGAAGTTGAACAAGAGAGATTTTCAATGGATGCA
CCCAATACTGCACTTAAAGCCTCGCCCTTCAACTATCAGTGGCCTATCAT
CGTTACCTATCGAGACCTAAATGACGTCAAATCAAAACAAGTCATCATGA
CAGGCAAAAAAGCCATCCTGCCAATCCCCGATGGTTCCGTATTAAATCCG
GACCATATGCAATATTACCGGATACGATTTTCAAAGAACAGCACAGCTCA
GTTGAAAAAGCAACTCATCCACAACCAAAGTAGATTCACTGTCAACGATC
GAATTGGAATCATCTCTGACATGTTTTTCAATTTGCAAGCAAGGAAAATG
AAACTAGAACAAGTTATTGACTTCCTGGAATATTTCAAgCATGAAAGAGA
GCACTCTACATGGACAGAGGGAATTAAAATCTTGACCAAAGTACACGACT
TGATAAAACACGATGATAGCTTACGTAACTTATGGGATAAGAAAATCATC
CAACCTTACGTCGAAAGAGCTTACTCGCTTTTCCAAAGCAAAGGTGCAGT
CATACGCGATGCTTGTTATTTGAATCATACACAAGCCATCCAGGATGCCG
AGATGTCAAAACAGACGCGTCctcaatcatcaatcagtgaAGAGAGAAGA
GAgggagagaagaaaaaaaacaaaagcatAAATCATTTTGGATTTCAGTT
TTGTGGTCGTTCCAACCGTTCACCTGATACCTGTGTTGTGATCGGCAAAA
AGATAAATACACACAAACACATCTATAAAAAGGACACTATCACTACCAAC
ATgctcaaatcacaaaagaaatcaCGCTGCAAAGACAACATGATTCTAAC
CATCAAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTGCTGTCG
TCCTAACATCCAGACGTAACATGCAACAAACTTTATTCAAAGATGAAAAA
CAAATCACCACAAACACTTTAAACAATGTTGTCGTGGTACCCCCTCAAGC
AAATCGAAACAAAAAATCGTTCACGTACCAAGGCCTCGGAGGACCCTGGC
AAAGCATCAGATTACCTACAGACATTGTGCCGCAACATTACGACTTAGAT
TTGAACGTGGACATGGACAAGGAGACGTATATCGGCGTCGTCAATATCTT
GGTTAATGTTACCGGGGACAGCGTAAGGTATATTTTACTTCATAAGGTCA
ACATCAGCATCACGCAAATGACAATCAACGACATTAACGGTCACAAATTA
AACGTTTTACAGACATTCGAGAACACTTTATATGAATATCTCGTCATTGA
GATGAGCTATCCTCTGATAAAAGGAACACAACTGAAGATTGGGCTGAACT
TCCAAGCTAGCCTGCGCACTGACTTGACAGGCTTCTTCATTACACGTAAA
GGAAACAGTAAGATGGCGGCCACCTTCTTGTCACCTGTCAGTACTCGCAA
ATTCTTCCCATGCTTTGATGAACCTGTCTTCAAGGCTACCTTTTCCATAA
AAGTCACGCATAGCAGCCAATACAAAGCTCTCTCAAATATGCCGGTTACC
ACTCAAACTACAGTGAAGAGCCAAACGAAAACtgaattcaaaaagtctct
tcCGATGTCGACATACAATTTAGGACTTCTTCTCGCTGACGATACATACC
AAGTCAAAGAAAAGCGTATTGTTGGTTCTTTGACCATTCAAATTTGGGAC
TTCAAAACGAACTCTGGTTGGAAAAGCGAGACTGATGATATAGTAAAACT
TTTGGATTATTATGAGCGACATTTCTTTCAAGTACCATTCCCTCTTGAGA
AATTAGACGTTGCCGTGATACCTGATTACATCCCAGGAGCAATGGAGACC
TGGGGCCTAATGATGTTTCGTGTGGGGTTAGATAAATATCATTTGGTGGC
TCATGAGATTGCCCATCAATGGTTTGGTAATCTGGTCACTATGGAGTTTT
GGGATGTTGCTTGGATCAAAGAAGGGTTCGCACAATATCTTGCGACGGTC
GTTGGCGACACCGTCAGACAAACGCAACGCTACAAAAACCAATTCTTCTC
AGGAATGTCAAGAGCTTTACCGATGGATTCCTACGCTACTTCTCATCCAA
TTGTTCCCGAGATTAACACGCCGACAGACATACGAAACGTCTATGATAAT
ATCGTGTACTATAAAGGTGAACCGGTCGTTCATATTTTGGCCACACTTGT
TGGGATGACGAACTTTCGCAAAGGCATGAAACGCTTtttacaacaataca
aatacaaaaatGCAGAACAAGACGACTTATTCAGAGTTTTTGGcGATATT
AGTGGCATCGATGTCAAATCTTTCATGGATCCATGGCTCTTACAAATGGG
CTACCCACTTTTGAGCGTCAACCGATTGAATAACACCCACATTGAAGTTG
AACAAGAGAGATTTTCAATGGATGCACCCAATACTGCACTTAAAGCCTCG
CCCTTCAACTATCAGTGGCCTATCATCGTTACCTATCGAGACCTAAATGA
CGTCAAATCAAAACAAGTCATCATGACAGGCAAAAAAGCCATCCTGCCAA
TCCCCGATGGTTCCGTATTAAATCCGGACCATATGCAATATTACCGGATA
CGATTTTCAAAGAACAGCACAGCTCAGTTGAAAAAGCAACTCATCCACAA
CCAAAGTAGATTCACTGTCAACGATCGAATTGGAATCATCTCTGACATGT
TTTTCAATTTGCAAGCAAGGAAAATGAAACTAGAACAAGTTATTGACTTC
CTGGAATATTTCAAgCATGAAAGAGAGCACTCTACATGGACAGAGGGAAT
TAAAATCTTGACCAAAGTACACGACTTGATAAAACACGATGATAGCTTAC
GTAACTTATGGGATAAGAAAATCATCCAACCTTACGTCGAAAGAGCTTAC
TCGCTTTTCCAAAGCAAAGGTGCAGTCATACGCGATGCTTGTTATTTGAA
TCATACACAAGCCATCCAGGATGCCGAGATGTCAAAACAGACGCGTCctc
aatcatcaatcagtgaAGAGAGAAGAGAgggagagaagaaaaaaaacaaa
agcatAAATCATTTTGGATTTCAGTTTTGTGGTCGTTCCAACCGTTCACC
TGATACCTGTGTTGTGATCGGCAAAAAGATAAATACACACAAACACATCT
ATAAAAAGGACACTATCACTACCAACATgctcaaatcacaaaagaaatca
CGCTGCAAAGACAACATGATTCTAACCATCAAAATTTTCTTAGGACTAGC
TGTTCTTGCTGGAATAGGTGCTGTCGTCCTAACATCCAGACGTAACATGC
AACAAACTTTATTCAAAGATGAAAAACAAATCACCACAAACACTTTAAAC
AATGTTGTCGTGGTACCCCCTCAAGCAAATCGAAACAAAAAATCGTTCAC
GTACCAAGGCCTCGGAGGACCCTGGCAAAGCATCAGATTACCTACAGACA
TTGTGCCGCAACATTACGACTTAGATTTGAACGTGGACATGGACAAGGAG
ACGTATATCGGCGTCGTCAATATCTTGGTTAATGTTACCGGGGACAGCGT
AAGGTATATTTTACTTCATAAGGTCAACATCAGCATCACGCAAATGACAA
TCAACGACATTAACGGTCACAAATTAAACGTTTTACAGACATTCGAGAAC
ACTTTATATGAATATCTCGTCATTGAGATGAGCTATCCTCTGATAAAAGG
AACACAACTGAAGATTGGGCTGAACTTCCAAGCTAGCCTGCGCACTGACT
TGACAGGCTTCTTCATTACACGTAAAGGAAACAGTAAGATGGCGGCCACC
TTCTTGTCACCTGTCAGTACTCGCAAATTCTTCCCATGCTTTGATGAACC
TGTCTTCAAGGCTACCTTTTCCATAAAAGTCACGCATAGCAGCCAATACA
AAGCTCTCTCAAATATGCCGGTTACCACTCAAACTACAGTGAAGAGCCAA
ACGAAAACtgaattcaaaaagtctcttcCGATGTCGACATACAATTTAGG
ACTTCTTCTCGCTGACGATACATACCAAGTCAAAGAAAAGCGTATTGTTG
GTTCTTTGACCATTCAAATTTGGGACTTCAAAACGAACTCTGGTTGGAAA
AGCGAGACTGATGATATAGTAAAACTTTTGGATTATTATGAGCGACATTT
CTTTCAAGTACCATTCCCTCTTGAGAAATTAGACGTTGCCGTGATACCTG
ATTACATCCCAGGAGCAATGGAGACCTGGGGCCTAATGATGTTTCGTGTG
GGGTTAGATAAATATCATTTGGTGGCTCATGAGATTGCCCATCAATGGTT
TGGTAATCTGGTCACTATGGAGTTTTGGGATGTTGCTTGGATCAAAGAAG
GGTTCGCACAATATCTTGCGACGGTCGTTGGCGACACCGTCAGACAAACG
CAACGCTACAAAAACCAATTCTTCTCAGGAATGTCAAGAGCTTTACCGAT
GGATTCCTACGCTACTTCTCATCCAATTGTTCCCGAGATTAACACGCCGA
CAGACATACGAAACGTCTATGATAATATCGTGTACTATAAAGGTGAACCG
GTCGTTCATATTTTGGCCACACTTGTTGGGATGACGAACTTTCGCAAAGG
CATGAAACGCTTtttacaacaatacaaatacaaaaatGCAGAACAAGACG
ACTTATTCAGAGTTTTTGGcGATATTAGTGGCATCGATGTCAAATCTTTC
ATGGATCCATGGCTCTTACAAATGGGCTACCCACTTTTGAGCGTCAACCG
ATTGAATAACACCCACATTGAAGTTGAACAAGAGAGATTTTCAATGGATG
CACCCAATACTGCACTTAAAGCCTCGCCCTTCAACTATCAGTGGCCTATC
ATCGTTACCTATCGAGACCTAAATGACGTCAAATCAAAACAAGTCATCAT
GACAGGCAAAAAAGCCATCCTGCCAATCCCCGATGGTTCCGTATTAAATC
CGGACCATATGCAATATTACCGGATACGATTTTCAAAGAACAGCACAGCT
CAGTTGAAAAAGCAACTCATCCACAACCAAAGTAGATTCACTGTCAACGA
TCGAATTGGAATCATCTCTGACATGTTTTTCAATTTGCAAGCAAGGAAAA
TGAAACTAGAACAAGTTATTGACTTCCTGGAATATTTCAAgCATGAAAGA
GAGCACTCTACATGGACAGAGGGAATTAAAATCTTGACCAAAGTACACGA
CTTGATAAAACACGATGATAGCTTACGTAACTTATGGGATAAGAAAATCA
TCCAACCTTACGTCGAAAGAGCTTACTCGCTTTTCCAAAGCAAAGGTGCA
GTCATACGCGATGCTTGTTATTTGAATCATACACAAGCCATCCAGGATGC
CGAGATGTCAAAACAGACGCGTCctcaatcatcaatcagtgaAGAGAGAA
GAGAgggagagaagaaaaaaaacaaaagcatAAATCATTTTGGATTTCAG
TTTTGTGGTCGTTCCAACCGTTCACCTGATACCTGTGTTGTGATCGGCAA
AAAGATAAATACACACAAACACATCTATAAAAAGGACACTATCACTACCA
ACATgctcaaatcacaaaagaaatcaCGCTGCAAAGACAACATGATTCTA
ACCATCAAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTGCTGT
CGTCCTAACATCCAGACGTAACATGCAACAAACTTTATTCAAAGATGAAA
AACAAATCACCACAAACACTTTAAACAATGTTGTCGTGGTACCCCCTCAA
GCAAATCGAAACAAAAAATCGTTCACGTACCAAGGCCTCGGAGGACCCTG
GCAAAGCATCAGATTACCTACAGACATTGTGCCGCAACATTACGACTTAG
ATTTGAACGTGGACATGGACAAGGAGACGTATATCGGCGTCGTCAATATC
TTGGTTAATGTTACCGGGGACAGCGTAAGGTATATTTTACTTCATAAGGT
CAACATCAGCATCACGCAAATGACAATCAACGACATTAACGGTCACAAAT
TAAACGTTTTACAGACATTCGAGAACACTTTATATGAATATCTCGTCATT
GAGATGAGCTATCCTCTGATAAAAGGAACACAACTGAAGATTGGGCTGAA
CTTCCAAGCTAGCCTGCGCACTGACTTGACAGGCTTCTTCATTACACGTA
AAGGAAACAGTAAGATGGCGGCCACCTTCTTGTCACCTGTCAGTACTCGC
AAATTCTTCCCATGCTTTGATGAACCTGTCTTCAAGGCTACCTTTTCCAT
AAAAGTCACGCATAGCAGCCAATACAAAGCTCTCTCAAATATGCCGGTTA
CCACTCAAACTACAGTGAAGAGCCAAACGAAAACtgaattcaaaaagtct
cttcCGATGTCGACATACAATTTAGGACTTCTTCTCGCTGACGATACATA
CCAAGTCAAAGAAAAGCGTATTGTTGGTTCTTTGACCATTCAAATTTGGG
ACTTCAAAACGAACTCTGGTTGGAAAAGCGAGACTGATGATATAGTAAAA
CTTTTGGATTATTATGAGCGACATTTCTTTCAAGTACCATTCCCTCTTGA
GAAATTAGACGTTGCCGTGATACCTGATTACATCCCAGGAGCAATGGAGA
CCTGGGGCCTAATGATGTTTCGTGTGGGGTTAGATAAATATCATTTGGTG
GCTCATGAGATTGCCCATCAATGGTTTGGTAATCTGGTCACTATGGAGTT
TTGGGATGTTGCTTGGATCAAAGAAGGGTTCGCACAATATCTTGCGACGG
TCGTTGGCGACACCGTCAGACAAACGCAACGCTACAAAAACCAATTCTTC
TCAGGAATGTCAAGAGCTTTACCGATGGATTCCTACGCTACTTCTCATCC
AATTGTTCCCGAGATTAACACGCCGACAGACATACGAAACGTCTATGATA
ATATCGTGTACTATAAAGGTGAACCGGTCGTTCATATTTTGGCCACACTT
GTTGGGATGACGAACTTTCGCAAAGGCATGAAACGCTTtttacaacaata
caaatacaaaaatGCAGAACAAGACGACTTATTCAGAGTTTTTGGcGATA
TTAGTGGCATCGATGTCAAATCTTTCATGGATCCATGGCTCTTACAAATG
GGCTACCCACTTTTGAGCGTCAACCGATTGAATAACACCCACATTGAAGT
TGAACAAGAGAGATTTTCAATGGATGCACCCAATACTGCACTTAAAGCCT
CGCCCTTCAACTATCAGTGGCCTATCATCGTTACCTATCGAGACCTAAAT
GACGTCAAATCAAAACAAGTCATCATGACAGGCAAAAAAGCCATCCTGCC
AATCCCCGATGGTTCCGTATTAAATCCGGACCATATGCAATATTACCGGA
TACGATTTTCAAAGAACAGCACAGCTCAGTTGAAAAAGCAACTCATCCAC
AACCAAAGTAGATTCACTGTCAACGATCGAATTGGAATCATCTCTGACAT
GTTTTTCAATTTGCAAGCAAGGAAAATGAAACTAGAACAAGTTATTGACT
TCCTGGAATATTTCAAgCATGAAAGAGAGCACTCTACATGGACAGAGGGA
ATTAAAATCTTGACCAAAGTACACGACTTGATAAAACACGATGATAGCTT
ACGTAACTTATGGGATAAGAAAATCATCCAACCTTACGTCGAAAGAGCTT
ACTCGCTTTTCCAAAGCAAAGGTGCAGTCATACGCGATGCTTGTTATTTG
AATCATACACAAGCCATCCAGGATGCCGAGATGTCAAAACAGACGCGTCc
tcaatcatcaatcagtgaAGAGAGAAGAGAgggagagaagaaaaaaaaca
aaagcatAAATCATTTTGGATTTCAGTTTTGTGGTCGTTCCAACCGTTCA
CCTGATACCTGTGTTGTGATCGGCAAAAAGATAAATACACACAAACACAT
CTATAAAAAGGACACTATCACTACCAACATgctcaaatcacaaaagaaat
caCGCTGCAAAGACAACATGATTCTAACCATCAAAATTTTCTTAGGACTA
GCTGTTCTTGCTGGAATAGGTGCTGTCGTCCTAACATCCAGACGTAACAT
GCAACAAACTTTATTCAAAGATGAAAAACAAATCACCACAAACACTTTAA
ACAATGTTGTCGTGGTACCCCCTCAAGCAAATCGAAACAAAAAATCGTTC
ACGTACCAAGGCCTCGGAGGACCCTGGCAAAGCATCAGATTACCTACAGA
CATTGTGCCGCAACATTACGACTTAGATTTGAACGTGGACATGGACAAGG
AGACGTATATCGGCGTCGTCAATATCTTGGTTAATGTTACCGGGGACAGC
GTAAGGTATATTTTACTTCATAAGGTCAACATCAGCATCACGCAAATGAC
AATCAACGACATTAACGGTCACAAATTAAACGTTTTACAGACATTCGAGA
ACACTTTATATGAATATCTCGTCATTGAGATGAGCTATCCTCTGATAAAA
GGAACACAACTGAAGATTGGGCTGAACTTCCAAGCTAGCCTGCGCACTGA
CTTGACAGGCTTCTTCATTACACGTAAAGGAAACAGTAAGATGGCGGCCA
CCTTCTTGTCACCTGTCAGTACTCGCAAATTCTTCCCATGCTTTGATGAA
CCTGTCTTCAAGGCTACCTTTTCCATAAAAGTCACGCATAGCAGCCAATA
CAAAGCTCTCTCAAATATGCCGGTTACCACTCAAACTACAGTGAAGAGCC
AAACGAAAACtgaattcaaaaagtctcttcCGATGTCGACATACAATTTA
GGACTTCTTCTCGCTGACGATACATACCAAGTCAAAGAAAAGCGTATTGT
TGGTTCTTTGACCATTCAAATTTGGGACTTCAAAACGAACTCTGGTTGGA
AAAGCGAGACTGATGATATAGTAAAACTTTTGGATTATTATGAGCGACAT
TTCTTTCAAGTACCATTCCCTCTTGAGAAATTAGACGTTGCCGTGATACC
TGATTACATCCCAGGAGCAATGGAGACCTGGGGCCTAATGATGTTTCGTG
TGGGGTTAGATAAATATCATTTGGTGGCTCATGAGATTGCCCATCAATGG
TTTGGTAATCTGGTCACTATGGAGTTTTGGGATGTTGCTTGGATCAAAGA
AGGGTTCGCACAATATCTTGCGACGGTCGTTGGCGACACCGTCAGACAAA
CGCAACGCTACAAAAACCAATTCTTCTCAGGAATGTCAAGAGCTTTACCG
ATGGATTCCTACGCTACTTCTCATCCAATTGTTCCCGAGATTAACACGCC
GACAGACATACGAAACGTCTATGATAATATCGTGTACTATAAAGGTGAAC
CGGTCGTTCATATTTTGGCCACACTTGTTGGGATGACGAACTTTCGCAAA
GGCATGAAACGCTTtttacaacaatacaaatacaaaaatGCAGAACAAGA
CGACTTATTCAGAGTTTTTGGcGATATTAGTGGCATCGATGTCAAATCTT
TCATGGATCCATGGCTCTTACAAATGGGCTACCCACTTTTGAGCGTCAAC
CGATTGAATAACACCCACATTGAAGTTGAACAAGAGAGATTTTCAATGGA
TGCACCCAATACTGCACTTAAAGCCTCGCCCTTCAACTATCAGTGGCCTA
TCATCGTTACCTATCGAGACCTAAATGACGTCAAATCAAAACAAGTCATC
ATGACAGGCAAAAAAGCCATCCTGCCAATCCCCGATGGTTCCGTATTAAA
TCCGGACCATATGCAATATTACCGGATACGATTTTCAAAGAACAGCACAG
CTCAGTTGAAAAAGCAACTCATCCACAACCAAAGTAGATTCACTGTCAAC
GATCGAATTGGAATCATCTCTGACATGTTTTTCAATTTGCAAGCAAGGAA
AATGAAACTAGAACAAGTTATTGACTTCCTGGAATATTTCAAgCATGAAA
GAGAGCACTCTACATGGACAGAGGGAATTAAAATCTTGACCAAAGTACAC
GACTTGATAAAACACGATGATAGCTTACGTAACTTATGGGATAAGAAAAT
CATCCAACCTTACGTCGAAAGAGCTTACTCGCTTTTCCAAAGCAAAGGTG
CAGTCATACGCGATGCTTGTTATTTGAATCATACACAAGCCATCCAGGAT
GCCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011770XLOC_011770Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020985-proteinTCONS_00020985-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020985-exon-sc0000376-1491911889:166839..167494TCONS_00020985-exon-sc0000376-1491911889:166839..167494Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1510915933:166839..167494TCONS_00020985-exon-sc0000376-1510915933:166839..167494Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1575043694:166839..167494TCONS_00020985-exon-sc0000376-1575043694:166839..167494Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1491911889:167552..168618TCONS_00020985-exon-sc0000376-1491911889:167552..168618Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1510915933:167552..168618TCONS_00020985-exon-sc0000376-1510915933:167552..168618Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1575043694:167552..168618TCONS_00020985-exon-sc0000376-1575043694:167552..168618Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1491911889:169652..169970TCONS_00020985-exon-sc0000376-1491911889:169652..169970Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1510915933:169652..169970TCONS_00020985-exon-sc0000376-1510915933:169652..169970Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1575043694:169652..169970TCONS_00020985-exon-sc0000376-1575043694:169652..169970Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1491911889:170233..170375TCONS_00020985-exon-sc0000376-1491911889:170233..170375Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1510915933:170233..170375TCONS_00020985-exon-sc0000376-1510915933:170233..170375Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1575043694:170233..170375TCONS_00020985-exon-sc0000376-1575043694:170233..170375Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1491911889:170544..170872TCONS_00020985-exon-sc0000376-1491911889:170544..170872Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1510915933:170544..170872TCONS_00020985-exon-sc0000376-1510915933:170544..170872Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1575043694:170544..170872TCONS_00020985-exon-sc0000376-1575043694:170544..170872Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1491911889:171077..171290TCONS_00020985-exon-sc0000376-1491911889:171077..171290Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1510915933:171077..171290TCONS_00020985-exon-sc0000376-1510915933:171077..171290Clytia hemisphaericaexon
TCONS_00020985-exon-sc0000376-1575043694:171077..171290TCONS_00020985-exon-sc0000376-1575043694:171077..171290Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:166839..171290 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.239429	0.288418	0.83088	0.668147	0	0	0.826118	0.881494	0.75997	2.33694	0.784797	0.551642	34.3404	18.9837	4.05438	4.95321	12.202	23.4634	3.32443	11.7309	5.64	6.05254	1.42613	2.13738	21.7144	19.9869	4.42981	3.13347	7.33547	8.02104
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014782Peptidase_M1_N
IPR024571ERAP1-like_C_dom
IPR034016M1_APN-typ
Vocabulary: Molecular Function
TermDefinition
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00020985 vs. Swiss-Prot (Human)
Match: ERAP2 (Endoplasmic reticulum aminopeptidase 2 OS=Homo sapiens GN=ERAP2 PE=1 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 1.784e-87
Identity = 212/718 (29.53%), Postives = 353/718 (49.16%), Query Frame = 1 
Query:  793 PWQSIRLPTDIVPQHYDLDLNVDMDKETYIGVVNILVNVTGDSVRYILLHKVNISITQMTINDIN-------GHKLNVLQTFENTLYEYLVIEMSYPLIKGTQLKIGLNFQASLRTDLTGFFI----TRKGNSK-MAATFLSPVSTRKFFPCFDEPVFKATFSIKVTHSSQYKALSNMPXXXXXXXXXXXXXE-FKKSLPMSTYNLGLLLADDTYQVKEKRIVGSLTIQIW---DFKTNSGWKSETDDIVKLLDYYERHFFQVPFPLEKLDVAVIPDYIPGAMETWGLMMFR-----------VGLDKY---HLVAHEIAHQWFGNLVTMEFWDVAWIKEGFAQYLATVVGDTVRQTQRYKNQFFSGMSRALPMDSYATSHPIVPEINTPTDIRNVYDNIVYYKGEPVVHILATLVGMTNFRKGMKRFLQQYKYKNAEQDDLFRVFGD-------ISG--------------------IDVKSFMDPWLLQMGYPLLSVNRLNNTHIEVEQERF--SMDAPNTALKASPFNYQWPIIVTYRDLNDVKSKQVIMTGKKAILPIPDGSV---LNPDHMQYYRIRFSKNSTAQLKKQLIHNQSRFTVNDRIGIISDMFFNLQARKMKLEQVIDFLEYFKHEREHSTWTEGIKILTKVHDLIKH---DDSLRNL--WDKKIIQPYVER-AYSLFQS------KGAVIRDACYLNHTQAIQDA 2724
            PWQ +RLP+ ++P HYDL ++ ++    ++    I V V+ ++ ++I+LH  ++ IT  T+           G +L VL    +     LV E   P +K     + ++FQA L     GF+     T  G ++ +A T   P   R  FPCFDEP+FKA FSIK+   S++ ALSNMP      ++     + F+ ++ MSTY +  ++ D  +          + + I+   D +  + +  +    +KLLD+YE+ +F + +PL KLD+  IPD+ PGAME WGL+ +R              DK     ++AHE+AHQWFGNLVTME+W+  W+KEGFA+Y+  +  +      ++ + F +     +  DS  +S PI     TPT I+ ++D + Y KG  ++++L   +G   F+KG+ ++L+++ Y+NA+ DDL+    +        SG                     +VK  M  W LQ G PLL V + +   + ++QERF   +   +   +A    Y W I +TY   +     + I+  K   L +P+ +     N D   YY + +  +   QL  QL  N +     DR+G+I D+F  + A ++ L++ +D   Y +HE       EG+  L   + ++      D   NL  +  +  +P ++R ++S   S      + A+++ AC LNH   IQ A
Sbjct:   63 PWQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVS-NATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVPEKLTPHLK---YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCD--FHSLSGFTSSGVKVSIYASPDKRNQTHYALQAS--LKLLDFYEK-YFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQ-DGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPEKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWSDKGSVWDRMLRSALLKLACDLNHAPCIQKA 770
The following BLAST results are available for this feature:
BLAST of TCONS_00020985 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERAP21.784e-8729.53Endoplasmic reticulum aminopeptidase 2 OS=Homo sap... [more]
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