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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021018 ID=TCONS_00021018|Name=TCONS_00021018|organism=Clytia hemisphaerica|type=transcript|length=988bp
GCCAAAGAAAATCAAGAGTCATTTCTGCAGCTGATATTGTTTCAGTCTTT
TAGACCATTGAAGCTTGATCCATAAAACTCCACTATTGGTATTGAGGAAT
CTGAAAGATTGCTTTGACTGCGATGCTTTAGTCGTCTAATGGCTCGTACT
TTGGTGGGCTTTTTCGTAGAAATCTTTATTATTCCCATACCATGGAAGGT
TCCATTTCCAGCTTGAGTGTACGAATGTTGTGATCAGCGTTATCTGCCGA
AAATTGTTCCAAAATGGGTTTCTCATTAACTTGGTTTGTTGTAAGTTCAT
TGAGTAACGAGTTCGTTTCGGATGTTGCTTGGTTGACTGTCGTTTGGTTG
GTTAACAGATTTGTCTCGGCTGTCGTTTGGTTGGTTAACGAATTTGTCTC
GGCTGTCGTTTGGTTGATTAACGGATTTGTCTCGGCTGTCGCTTGGTTGG
TTAACGGATTTGTCTCGGCTGTCGTTTGGTTTGTTAACGGATTTGTATCG
GCTGTCGTTTGGTTGGTTAACGGATTTGTCTCTGATGATATGGATGCAAT
AGCAGATTCTTTGAACAATTTAACTTCTGCAGAGGATACGGAAAATCCAA
ATTTCGCTAAATGATCAATAAACCATCTAGTTGCGAAAGATTTGTCAAGA
TCTACGCCTATTCCAAAAGGTATCGGAGCAATTGATGACCTCGGTCTTGA
TGCGAGTGTGATTGTCTGGCCGATGCTGATTTGTTTGAGCTTTGAAGTGA
ATACTTGTTCGAGAAATATCTGCAAACTCTCAGGTACCCAGTCTGCTTGA
TAATCTAAGTTCTTCATTTCAATCAAAGAAGGATAAAAAGTCTTATCTAA
TGGCATTTCTCTAATGtcacttttgatgatttttgcaGCAGCTATTATCA
TGTCAACCGGTCTTCGttcttttattttcatgaaCTCTTCCATGAAAAAT
TTGCTCATGTGTTTAAAACCAATTATATCGCTTCGCCC Run BLAST on NCBI protein sequence of TCONS_00021018-protein >TCONS_00021018-protein ID=TCONS_00021018-protein|Name=TCONS_00021018-protein|organism=Clytia hemisphaerica|type=polypeptide|length=269bp
GRSDIIGFKHMSKFFMEEFMKIKERRPVDMIIAAAKIIKSDIREMPLDKT
FYPSLIEMKNLDYQADWVPESLQIFLEQVFTSKLKQISIGQTITLASRPR
SSIAPIPFGIGVDLDKSFATRWFIDHLAKFGFSVSSAEVKLFKESAIASI
SSETNPLTNQTTADTNPLTNQTTAETNPLTNQATAETNPLINQTTAETNS
LTNQTTAETNLLTNQTTVNQATSETNSLLNELTTNQVNEKPILEQFSADN
ADHNIRTLKLEMEPSMVWE Run BLAST on NCBI transcript from alignment at sc0000376:106372..107359 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021018 ID=TCONS_00021018|Name=TCONS_00021018|organism=Clytia hemisphaerica|type=transcript|length=988bp|location=Sequence derived from alignment at sc0000376:106372..107359 (Clytia hemisphaerica)
GGGCGAAGCGATATAATTGGTTTTAAACACATGAGCAAATTTTTCATGGA
AGAGttcatgaaaataaaagaaCGAAGACCGGTTGACATGATAATAGCTG
CtgcaaaaatcatcaaaagtgaCATTAGAGAAATGCCATTAGATAAGACT
TTTTATCCTTCTTTGATTGAAATGAAGAACTTAGATTATCAAGCAGACTG
GGTACCTGAGAGTTTGCAGATATTTCTCGAACAAGTATTCACTTCAAAGC
TCAAACAAATCAGCATCGGCCAGACAATCACACTCGCATCAAGACCGAGG
TCATCAATTGCTCCGATACCTTTTGGAATAGGCGTAGATCTTGACAAATC
TTTCGCAACTAGATGGTTTATTGATCATTTAGCGAAATTTGGATTTTCCG
TATCCTCTGCAGAAGTTAAATTGTTCAAAGAATCTGCTATTGCATCCATA
TCATCAGAGACAAATCCGTTAACCAACCAAACGACAGCCGATACAAATCC
GTTAACAAACCAAACGACAGCCGAGACAAATCCGTTAACCAACCAAGCGA
CAGCCGAGACAAATCCGTTAATCAACCAAACGACAGCCGAGACAAATTCG
TTAACCAACCAAACGACAGCCGAGACAAATCTGTTAACCAACCAAACGAC
AGTCAACCAAGCAACATCCGAAACGAACTCGTTACTCAATGAACTTACAA
CAAACCAAGTTAATGAGAAACCCATTTTGGAACAATTTTCGGCAGATAAC
GCTGATCACAACATTCGTACACTCAAGCTGGAAATGGAACCTTCCATGGT
ATGGGAATAATAAAGATTTCTACGAAAAAGCCCACCAAAGTACGAGCCAT
TAGACGACTAAAGCATCGCAGTCAAAGCAATCTTTCAGATTCCTCAATAC
CAATAGTGGAGTTTTATGGATCAAGCTTCAATGGTCTAAAAGACTGAAAC
AATATCAGCTGCAGAAATGACTCTTGATTTTCTTTGGC Coding sequence (CDS) from alignment at sc0000376:106372..107359 >TCONS_00021018 ID=TCONS_00021018|Name=TCONS_00021018|organism=Clytia hemisphaerica|type=CDS|length=810bp|location=Sequence derived from alignment at sc0000376:106372..107359 (Clytia hemisphaerica)
GGGCGAAGCGATATAATTGGTTTTAAACACATGAGCAAATTTTTCATGGA
AGAGttcatgaaaataaaagaaCGAAGACCGGTTGACATGATAATAGCTG
CtgcaaaaatcatcaaaagtgaCATTAGAGAAATGCCATTAGATAAGACT
TTTTATCCTTCTTTGATTGAAATGAAGAACTTAGATTATCAAGCAGACTG
GGTACCTGAGAGTTTGCAGATATTTCTCGAACAAGTATTCACTTCAAAGC
TCAAACAAATCAGCATCGGCCAGACAATCACACTCGCATCAAGACCGAGG
TCATCAATTGCTCCGATACCTTTTGGAATAGGCGTAGATCTTGACAAATC
TTTCGCAACTAGATGGTTTATTGATCATTTAGCGAAATTTGGATTTTCCG
TATCCTCTGCAGAAGTTAAATTGTTCAAAGAATCTGCTATTGCATCCATA
TCATCAGAGACAAATCCGTTAACCAACCAAACGACAGCCGATACAAATCC
GTTAACAAACCAAACGACAGCCGAGACAAATCCGTTAACCAACCAAGCGA
CAGCCGAGACAAATCCGTTAATCAACCAAACGACAGCCGAGACAAATTCG
TTAACCAACCAAACGACAGCCGAGACAAATCTGTTAACCAACCAAACGAC
AGTCAACCAAGCAACATCCGAAACGAACTCGTTACTCAATGAACTTACAA
CAAACCAAGTTAATGAGAAACCCATTTTGGAACAATTTTCGGCAGATAAC
GCTGATCACAACATTCGTACACTCAAGCTGGAAATGGAACCTTCCATGGT
ATGGGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021018-exon-sc0000376-1491911889:106372..107359 | TCONS_00021018-exon-sc0000376-1491911889:106372..107359 | Clytia hemisphaerica | exon |
| TCONS_00021018-exon-sc0000376-1510915933:106372..107359 | TCONS_00021018-exon-sc0000376-1510915933:106372..107359 | Clytia hemisphaerica | exon |
| TCONS_00021018-exon-sc0000376-1575043694:106372..107359 | TCONS_00021018-exon-sc0000376-1575043694:106372..107359 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000376 | supercontig | sc0000376:106372..107359 . |
Blast
The following BLAST results are available for this feature:
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