TCONS_00021039 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021039
Unique NameTCONS_00021039
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3958

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021039 ID=TCONS_00021039|Name=TCONS_00021039|organism=Clytia hemisphaerica|type=transcript|length=3958bp
TAAAAGAACATGGTTCCAATATGTTTAAGTATGATCCTGGTTGAAGACGA
CGTTCGTGTAAAGGTTTGTGTTGTGGAGAACGGGTGTAGCAAAGTACACG
TATAACGCACCACTTGGCAGTTGGTATGGTTTTGTTGTGGCTTCGCTTTT
CGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGGATGGAACCCAAAGAtgaa
agaagccattgtagtgcaatgtttacatttttggaaagttctaAAATGGT
AGAAGAAGCTCTGTAAATAAAAATTAGACTCTTTTACGTGTTGTGTCGTT
CACCACGTTGAGTTGAATTGGTTGGTTATATTTTAAAGGCTTGATTCATA
CTTTTGCTTTGATACATTTGATTCTCAATATCAACGTCATACTTTGAAGT
TCTGTTTATCCTCTCAGTTAGTATATTTTAAGTTCACCTCTGATTGGATA
TATAAACACTGCCTCGAAAGACAACAGGAAACATATGATTATGAATGAAG
GGTAGTGTTTTATAGGTAGTAGAACCTAGAGGTGccttgtttttcatttg
tttcatacTTCAATTGGTAATTTTAGTGATTGCTAAAGTATTTGGAGAAG
CATTTGCTCTCTGACTGGATGAGGTGCTCTGCATTGTGGTGGTGGCGCAC
AAAcaatttttagtaaaaaaaccATTCCTTTCATCTTTTAGtgaatagaa
aaagaaagtagcATTACATGAATCAAAATGACAGAAATGGTTATCATGCC
AACAGATGAACGTATCCCACCGATGGGATCAGAAGCTGCAGATACACACT
TCAATGAAACTGCTGCATACGATCCTAAATTAAATACAAGAGACTTATCA
CATAATAATAACAAACAATGTATTCCTCATTACGAACATTGGAAGGACAG
CTTACCAGATCTATTAGATGACACAGAaggatataaattattttacgAAT
TTCTAGAGCAAGATAAAAGTATCACGTTATTTGAATGTTGGTATTGCTGC
AATCAATATCGTAACTTGCCACCAACTAGAACTAGTGCCAAAGACATTTA
TCATAGATTTGTAAAGAAAAAGGACCCACATATTCCAATTTCTGAtcaag
caagaaataatttggtATTGAGGATAAAGGCTAACGATATTACAGAAAAA
ATTTATGAGGAAATTGAAAAGGAAGTTTACACTAATTTAAGGGACAtttg
ttatccaaaatttttaaaatcagactGTTTTAATCAATATTGCGAAAGTT
CTGGTCAAATGCGGTATGCAGAATATAATACCGATTATGGAAAGCCATCA
ACAAAATATAGTGGAGTCCTTGATCACATTGACAAGCATGACCAGTATCA
ACCTCAATCAAGATCAGAtTATGAAAGGCAGTATGAATGCGCCCGTCATC
CACACCACGATCGAGTTCACGGACCCTCATCCAATTATGACGATCATCAT
AGCATGCCGTCAGATTATGATCGTAGCTCTATAACAGATTCCAAAACTTC
CATggGATCAAGTAGTCGACACGGTAGACCGTCTCGAGGTCACAATCGCG
ATTACGATGGACCAATGGACGTTAACAATTTCAAGCCGCGTACGCAGCGA
ATCAATCAAGATCGCATGAAACCGATGAAACCGACAGACTTTGCTGCACT
TTTGAcgcaaaaacttgaaaaagtttTGATCGACCGAACTAGAGATGGCC
ATGATAATTCGTCACACCATTCTCATGGTGACTCAATGGATCTGTCTTCA
ATGAAACATCATCTACCAGGTGGACACAACAGTCGAGTACCACCCCACCA
TCAACCTCACATACACGATTTCGATGGCCAGAGTGAGAGTGACGCCCAAT
CTTGGGTGCTCTCTGACCGGCCAAGCGTCGCCGGACAATCATCACATAGT
GGCTCACACAGTggtattttaatgaaaaataaagcaaaagaaCTCAGAGA
TAAAATTCATCATCATATTCGAAGTGACTTGAAAGAATGTCGTTGTGCTG
AGTGCCGCCTCACGCCCTCCGTACATTCGGGCGGTCGTCACGAACACGAT
TCGCATGCACGACACGGTGGCTCAGAACATGGTTTTTATCCACACAGTAG
TAATAGTAACTCTTATAATTATTCCAATGATACAATACAAGACCGATACA
ATACAATGTCGTCATCATCTCACCATCGTGGTTCCTCGCGCACGCGTGAA
ACGCACCCGCATCCAGATGCTGCACCACCATTAGACACTAGTAAAATTTA
TTCTTGGATGGAGAAAAACGAACGTTACCAACATCAAAAATCGTACCCAG
ACCCCTCCCCGTCACCTTCTTTACGTCGAAAGAAAGCACCTATACAATAT
AACACAAGTAGGTCACAGAACTCTCAACAGCCTATTGCGCAAGATACGGG
CATGCCGTTATTACCACAACCTGACCCAGACAATGTTTTACAAGAGGTTA
AACGGAAACTGGAAGAACCCTCACGATCACAACAAAATCATCACCGATCT
TCaagacaacaacaacaatatcATACGCCCCATTATGAGGGCGGATACCA
CCCTCATCACGATAATCAATCAATGGCTTCTGCTCCTTGGTCGATGTCTG
ATAACTCTTCAATTATTTCTTATAACCCTTCACAAGTTTCTACCGTACCT
TCATCTGCGTCTAGATTATGGAACGCTCAAGGTTATTACAAAGATGCCGG
TAGTGAAGTCAGAGACGATCGTTGCACGCCTAGCGAAGTTCACTCGCAAG
CAGCTTCTAAACACAGCGGTCCGCGTAGCGTGACACGTAGTGATCATATG
AGCGCTGCACGCAGTGATCATCACAGTGACGTAAGATCACAATCGACGGG
AATTAGTTACGGCAGTGACGGTAGTAAAGGACGTTCTTCTTCttctaaaa
ataaaactgtTATCACGTATTATTACGGTAGTGAACCTATCCCGTACCGT
ATTAGCGTTCCGACTACGGAGGTTACGTTGTCACAATTCAAACTCGAAAC
CAAACGTGGTAATTATCGCTTTTTTTTCAAGACTGTTTCCAGTGTCGATG
GTGAGGTTGTTTGGGAAGAATTCAAAAACGATGATGATGTCCTACCTAAA
TTTAATGATAAAATTGTTGGCAAAGTCGATAAGATCTAATTGACTTTGGT
TTTTGGATTTATTTGTTGTTATTGTTTGGATTATTTCTCTTAATGATAAT
CATGACGGAATTGTTGTTAATGTGGACCAAGTTTTGATTCTACCATAATG
AACTTATaatatttatgacgtaatgttttaaacAGAAGCACCCTAAAAGA
CCAAACAGCCGGTCTAATTTTGAATTAAACAATAAACTAGGCCCTGGCTA
TTTTGGGTGCTTGCGTCTGAAAAATTCCGACATGAATGATTGATCATGAA
TTGATAAATgcgttgtttttttatatagaTCCTCGTGTTaatgattacgt
catgaatattattGTCCGCTTGGTTATATTATCactgtcttttttttttc
aaatttatgctCTGCATTTAAAACTTTATCACTATTTATATTTTGCCAAT
TCTTCTACCCCTGTTTGATACCCCTAAatatttgttcaattttttaccTT
CCTCGTACAGGTTCGGGAatcgaaattcattttgacaaatttgaactttt
tgccaAGTGTCAAGATATTCTTTCCTTGCTTACTCTTGGCTTTACCTTTC
CAACTTTCTTCCTTTTTCCTTTTATATTCCttcctaaattttttaaaata
gatattttacaattttctccCTTTAAGTTAATATACAATATACTGAAaag
agttttattttttactagATTTATCTTACTACCCCATGATTGTATGATAT
TTTAAGATAAACCCCGAAATATACCCCTTTATAATTACACCCCAATATtg
tgaaaaaatgaaataatatcaaaaaatacaacaaaaggaaaaatgtgaaa
attaacaa
Run BLAST on NCBI

transcript from alignment at sc0000377:135504..149964+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021039 ID=TCONS_00021039|Name=TCONS_00021039|organism=Clytia hemisphaerica|type=transcript|length=14461bp|location=Sequence derived from alignment at sc0000377:135504..149964+ (Clytia hemisphaerica)
TAAAAGAACATGGTTCCAATATGTTTAAGGTAGCGTTTTACCCTTAATCC ATAACCATAGGGACCATCTTTTGTACAGTTTTCTTGGCTGTTTATAAACC CGTGtttatgacctgtgacctgttaaCTTTGACCTGCGCGAAATCTATTG TATTTGTTTAGTCTTTATGAAGACTTGTTCATGATGGCGAAAGCGAGCCT GTGTCCCAGTATTATAGTTCGTCATTCAGGCGCTATCATTGATAGAATTG TGTCATAGAGAGCTTAAGACAGAGTGATAGATCATGATGCATCattgttt aaagaaaataatttcaacaaaaaaattttcaaatgagtTGGAAAAATGAA GCACTGTTCAGACAGAGCCGGTATGCATTAATGTATGGCTCTCTTACTGA GTTTTTCTTTAGCTTACGTGTATATTTCTAAGTTAAATGTAACTGTTCTA ATGTGTTTTGATCGTTTTAACtgtgtttttatattttattttcatattgt tTGAATTTTCACGCCATGCCCGTGTGTGCATTTTTGTGAcctcttttcat ttttaaaagaaagaccCCCTGGCTGTGTGAAATGGTAGAGAGATCAACGG TTTTAAAGAATTTGCCGGTATTTCAAAAAGAGAGCACTCAGCAGCAGTCA GTAGTAAAAAAATTTACGTCGTATAAACTCAACTGTCAAGTCAGGTGGAC GTTTCACTCTCTCTATAATTTAATATCCTCGTAACCGAGGATTTTCTTTG AGTGGAATACAAGGAATGGAATATTGCAGGAGAgcattttttaaatgttt acagTTTATTGGATAAATGGTcttaattcgaattacagaagatTTCCAAA ACGGtgaaggttcgaattagagagatttaTTCGGAGTTACTTGAGAGGAA ATGAAATGTTAAAGAAATGTGTCACTGAATCGCATAATAGCTATTTGCAG GAAATTCAACTTTTATGATTATcggattgaaaaatttaacaCAAAGAGGA TGAAGAAGTAGACTAAGTCGGCGAATAAGCGGTATAAAATTCcgttattt ttgataattttgtgagAGATTTCATAACAAAAAGCATAATTTGTCATAAT ATGATCTAATTCGGTGCTACAAATTTACCGCCGGCAATTAAACCCCGCGC ACGAGAGAAAGGCGGTTAGTTTGTTATTGTTAACATAAGAAAGCGATATG TTTTACTTTACTTAGCACTTTTAAGCCGCATCATAGTCGATGTTGTCAGA CATTTCAGagttgtttgataaaaaagtcgGCTAGCAAGCATATCCTCCGT TTTATTAACACTCTTGTTATATCTCATAGCGGTAGgtttttttgtttgta tatAAGAAGCTTTTCCTATTCAATGACATGTCATATAAATAATACTTGCC AAGAATGGTGTATATTTTGTCAATAGTAATAAATGAGTAGTGAAGGCATA GTCGGTAAACTTAACCAAGcatgttaatttttatttttcatacatGTTTC GATTTAATAATCATCATCAGTGTTTTTAGTTCTAAAAATAGATAAATGTG TCACTTTGTCAATAGTATGATCCTGGTTGAAGACGACGTTCGTGTAAAGG TTTGTGTTGTGGAGAACGGGTGTAGCAAAGTACACGTATAACGCACCACT TGGCAGTTGTAAGTTATATTATTTGCTGGATACATAATGTATTTGTTGTC TTTAGGTTTGTTTGGGCTTGCTGAGGGGTTAGGTCTGTGTAAACTTGCTT TAGGAAGATGATGTCGTGTTTCGACTGCATTTTTACCCTTATTTCAAATG ATTACTAGTATGTCGCTACACCCATGTCTCATCTCAGTATTGTACATCTG TACATATCACATTACTGTATCCTTTTAAGACTGAGATTTCTGAACGGAAC ACAGGCCCAGCGGAAGCGGGAAGACTTaggagccttcagcctccccactt taaaCCTTGAAGGGTTGTTCCACTGNCCCAGCGGAAGCGGGAAGACTGag gagccttcagcctccccactttaaaCCTTGAAGGGTTGTTCCGCTGGGCC TGGAATAGGAATATGGGCACTGATACATGAGTAAGATGGGAGATTAAAGc ataatacacttttttataagaaaaattttataagaacaatgaggctcgaA ATTGccacaaaataagaacaatactgagcctggaattactcaatttcaag caatttaggggtcagaTTAGTAAAAATtggatacatgtttttttataaga gcatccaaaatttttgaagcctgcgaatgaactttttgagttttaagcct ataaatgttcttaacatgttcttattttgaccattttgttagtatttttg accattttcctaagaaatagggtgttttttagtctacaaagccttgaaat gttcttaacttgttcttaacattttggccatcgaagccttatgttcttat atagtttgttcttataaaaaagtatacTGTAACGCTTAAAACACCTCAAT TACATCTTACaaaacaggataagaacaatttgaggctcaaagtgccaaaa aataagaacagccgagcctcagccaaattttactggttcttataaaagaa agtgtaCAGCACACCAATGGTGATTTGGAATCATTTAGTGTTGGCTGGGA TTGCCTTTAATTAGTATATCTAAAAGGTATTAGTACCAGAACTCCAAAGA CCCGTGAGATAATAatttagttttaaaaacagtTTCAGGAATTTGATCGG AAATGTAAAAATTTCACCTCCGTAAAAAGCGGTTGTTTACTCAGTcagtt aaaagttttgtttatacaagaatattttaaatattttctttgatatATGC AGTTTATAATTCAGTATAATGGTCAAATCGTGggaaaattgcttaaaata acATAATCACTCACCCATTTTACATATTCTATAGTTCAGTGCGctttttt tgttaaataaaaGATTACAGGAAGCGAATAGGGTGTAACTATGGTAAATT GGTCTTTGATGGAAAGGCTTTTGCCGATCAAAAACAGCCATACACACATT GagtaaaagaaataaaaagtaaaagttaaATAATTCGTTATTGTGAATAT ATTCATCGATTAAATAATTtaacaaaaaaggtttttcgttctcatttttt ttataattttgatcaTAGTAACTCATTGTAAGGGTTCTCGAAAATGCGAT GAGAATGTTTTTAAGAAAACGCGTAATAAAGCAGTAGCGACACTGTAATT AGGTGAATAGATGCGGTTCTTGATTTCATGATGGTCCCTAAATATATTTT AGGAAAAACTATACAAAATGATACGAGTCTTGGTTGGGTAAACCAAAGTA TTCTAAACATTTCCATAGTGACCTCTtttcagaaaaacattttttaataa caCAGTACGCAATCTTTATCCATATCTTATTGTACCTGTTAAGAGCATGC TAAAAATTAGCTTGTCGACAGAGGCGAAAAATGCCGAAAACTCGCGAATT TTAGCTCTTCATTGCGCTCTTGAAGGCTCTGTCTCCTATTCTTGTTTGCA CGTCCTTCTTAAGTAAACTTTAGGTAAAGAAAAACGACACTGCACTTCTt gtaaaaaagcggttttctgtAACTCATATAATAAACactaaaaacaattt ttttattctagTCTTTGCTTAAAGCGCGGCTAACAATAGAGAAGCAAAGT ACTTTAAcacattcgaaaaaaaaagttcggTTAGTTAAGTCCTGTGTTTG CTATTGCATAGAGTTTGCCGACCGACAGTTTTCTCTCTTTCTATCTCATA TAAGAAGGGAGATGTGGTTTCAGAGTAtaggtttgagattttttttgtcT AGCTCCTACAAATTACCGTTTTTAATTAATTATAACAAGGAGAAGAGAAA AGAACGCTTTCTTTCGCACATGTGCTAAATCTTATTGTTAGTAGATATAT GATAACAATAATGTCTTCTCCTATTGGTGCGGTTTCTCCTCATCGCGCAA TCTGATTGGTGCGGCTTTGAACAAAAGAAGTGACGTCGAGAGGTTACTAC ATAGCAAATAAACCGCTAGTGAGATCGGTTTCTTTGATGTACTATGAAAA GCTAACAGACGTTCAAAGTTTTATATATATCTTTGCTGGGTGCCGTGTAG CAGAGAGAGAGGAGATTTTTTATGTAGAGGATTCAGGCGAAAGATgaata taataataacaatactAATAAAAAAGTAAGAGAGAGAGAAAAGAGTTGAA GTGAagcagagagagagagagaatatATACACGAGAATTTGGTTTTGTTG TGAGGGTTGTGAGCATGTAGTTATACATGTATTATATGAAAGGTCNGAGA GAATATATACACGAAAATTTGGTTTTGTTGTGAGCATGTAGTTATACATG TATTATATGAGAGGTCGATATtacattttgtgcttgttgttGTTctgcat tttattttcataaaatatactGATAGATCCTCTAGCTACTTGATATTAAG CTTTTGGTAAAATGATACGATATGGATTGTATGTTTTGAGTGTATGTATG TGTATACATgtaattttatttcaaacaaagataatacaaatttcaatttt ttgcactGCAAAACACTGACATAATCCTAGTCAAGTCAACAAAGAAAGGT TTGAAATCTCAAGAGGTTACCTTGCCAAATGATTAGAGAAGAGAGAGAGA AGAAAAATACATGATATCAATTTGTTATACGGATGCTTCATAGAGTTTGA AAATTATAATCACACAAAATGGATAGATATAATTGAACAATTAGATGgct tttttgatgttgtttaTGATGGCTCGTCAACTGAAAGTCATCATTTTGTT CTGTGTTTTGTTTTGTGGATAGCCGCTGAGAATTGGTTACTGTTACTTAG GGAGAACTAGctataaagaaagaaatttcaaaagttgaTGATTTTATAAA AGTTTGCAAACTCAACACGGTAAATCACTTACCGAGAAATTGAACAAGCC TTGAAACGATTTCAACGATTGAAAGAAACCAGAAAGGAACATACCAGCTA AGGGTTGAATTTTCTATTACATTTGTTGTTATAGGGTATGGTTTTGTTGT GGCTTCGCTTTTCGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGGATGGAA CCCAAAGAtgaaagaagccattgtagtgcaatgtttacatttttggaaag ttctaAAATGGTAGAAGAAGCTCTGTAAATAAAAATTAGACTCTTTTACG TGTTGTGTCGTTCACCACGTTGAGTTGAATTGGTTGGTTATATTTTAAAG GCTTGATTCATACTTTTGCTTTGATACATTTGATTCTCAATATCAACGTC ATACTTTGAAGTTCTGTTTATCCTCTCAGTTAGTATATTTTAAGTTCACC TCTGATTGGATATATAAACACTGCCTCGAAAGACAACAGGAAACATATGA TTATGAATGAAGGGTAGTGTTTTATAGGTAGTAGAACCTAGAGGTGcctt gtttttcatttgtttcatacTTCAATTGGTAATTTTAGTGATTGCTAAAG TATTTGGAGAAGCATTTGCTCTCTGACTGGATGAGGTGCTCTGCATTGTG GTGGTGGCGCACAAAcaatttttagtaaaaaaaccATTCCTTTCATCTTT TAGtgaatagaaaaagaaagtagcATTACATGAATCAAAATGACAGAAAT GGTTATCATGCCAACAGATGAACGTATCCCACCGATGGGATCAGAAGCTG CAGATACACACTTCAATGAAACTGCTGCATACGATCCTAAATTAAATACA AGAGACTTATCACATAATAATAACAAACAATGTATTCCTCATTACGAACA TTGGAAGGACAGCTTACCAGATCTATTAGATGACACAGAaggatataaat tattttacgAATTTCTAGAGCAAGATAAAAGTATCACGTTATTTGAATGT TGGTATTGCTGCAATCAATATCGTAACTTGCCACCAACTAGAACTAGTGC CAAAGACATTTATCATAGATTTGTAAAGAAAAAGGACCCACATATTCCAA TTTCTGAtcaagcaagaaataatttggtATTGAGGATAAAGGCTAACGAT ATTACAGAAAAAATTTATGAGGAAATTGAAAAGGAAGTTTACACTAATTT AAGGGACAtttgttatccaaaatttttaaaatcagactGTTTTAATCAAT ATTGCGAAAGTTCTGGTCAAATGCGGTATGCAGAATATAATACCGATTAT GGAAAGCCATCAACAAAATATAGTGGAGTCCTTGATCACATTGACAAGCA TGACCAGTATCAACCTCAATCAAGATCAGAGTAAGTATACCTTGTTTAAT AAACAATTTTTGGAAGGTTCAAGGCTCCAATTACATCCATTAGAGTTTCT TCTCATTGATATAAAGTCAGGAGGAATCAGAGAAATTGTAATACAATAGG GATGAGCATACACCTTTTCTTATAACAACAATTTACAGAAAATGTGACTC AGTCTCATTTGTTATTGCAACAgaatttcagcctgaaatgaaaaaataac taGCTAGAGGCACATTCTAAATTTCATGGTTTTCACAAAAAGAAATCTgc atcatgaatatttttgaattaagaagaccagatattttcaaaaatatcaa tatgaCAACAAGTTGCATACTTTGCAATCTTTATAATCAAAACAGCATTC CTTTTCTTTGAAGAATACAACATTGATATTCTGTAATTTCCTTGCTTTTA TACAGATCTAATAGCTTTTCACGACGGTGCCTGAGGATGTAAAGAGAGAC TACATTGATTCCTCTCATAGCAGGAGAACACTTTAGTTTATATAAGGACA GTAatgtttttaaggttttttaagaattcttttaaactggcacctttaaa actttattttccAGGATGTTTTACTTTTAAGCTTTATTCTATGATGATTG CTTTgaatttatgttgttttttgaaCTGTTCTCTTTCTCAATCTTCAAAA GCTTACGACGCCATTGTTTCATAGAGAGATCAAATTAGTATCAATTATGA GCAAAGCTTCAAAAAGAGATTCGGTTTTTTTTATTGCCGGTATGTAATAa tcaaagataaagaaaaaacatagAATAGGATcatgtagaattttttttct tttttaccaaATTGCCGTTTCCTTTTCACTGCAATTTTGGCTTAGGGAAA ATATGTCGTTACTACAGGTCTAAATGGAACTTTTTTGTTCATGTAATTTC TGATGACTAAAGATTACCATATTCAGAATATTTTTGGTACTAATAACTTT AGGTACTGAATTTTACAGTATGTAAGGCTTCCTCTTCTAATTGACAATTC ATATATATTTCCAAAAAGATatagaaatgaagaaaataccCTGAGAAGTT GATAATGACAAAATTCCTTTTGAACTATGATATATATAATCATGTTTCAT Tccctttattttcttatttttcattttttggttatcttttttatttcagt tcaaaatttttcttgaaaatctttttccacAAGTAGATGGTAGAAAGAAA gtttttccttttctctttttttttaatcatcaaaATTCCCCTCTCTATTC AACAATTCCTTTATGTTGTTGTGATACTCAAcgctttatacttttttttc atattttgcgataatgtctttttcttttcttgtgtCCTACTTGTTTACAT TACACACCAATATTTATCAcataaaaggaaagaaaaacttAACCTTGCAT TCCGGTGTAATACAGCCCTTAAAGTCGCCTGTCACTACCCTGTTATACTA TTTATCATTTGATGTTATGTTgctgtttctctttttttaatgaatttttt tttcttcccctctatgttatgtttttctttcttttcactcagcataaacg tttcttataagaacaaagtatataagaacattacatttcaaggtaaaaaa tattaagaaaattctaagaacattttaaaacactTTACAAACCCTAACAT GCAATATCTTAGGAAATTACactaaagcactttgaaatgtTTGCAatttg ctgaaaataagaatatttcatattaatgttcttatagaaaTAACGTGTAC AATTTCTCAGTGTGTTTTCCTTTCACGGTTAAAAGCCTCTCTGTATCGAT TGGACCGCTTCCATCAAAAGACTTCGCACTAAATTACATGAAACTTTGTT TCAATCATAataaaagaacaacaaaaaatatTCCTTGATGGATTGCAGCC ACCTCATTATTACAATCAAAACCAATATTAATATACtcctttgaaaatta attttaaaaattttccctttttttctctttacagtTATGAAAGGCAGTAT GAATGCGCCCGTCATCCACACCACGATCGAGTTCACGGACCCTCATCCAA TTATGACGATCATCATAGCATGCCGTCAGATTATGATCGTAGCTCTATAA CAGATTCCAAAACTTCCATGTAAGATTAACTCTAATATTTCTTTTTCGGC ATAAATTGGAATCTTATAATGTATATGTCCTTAGTTTTCTGAAACCATTG GCTATCAGTTCCCAATAGTTTAACCTAATTATTTCCACTTTTTAAATGCC TCTAAAGCCtatgtttttcaaaactctATTTAGTAAAgtactttcttttt ttatttagggGATCAAGTAGTCGACACGGTAGACCGTCTCGAGGTCACAA TCGCGATTACGATGGACCAATGGACGTTAACAATTTCAAGCCGgtaagat tttatttaaaatttcttcattacaAGTCCGAACTTGATTCAAAGTAATCA AAGAACAGTTCTTTTAAACGATAAATCAATGATATAATATAACTGGGAAC CTTTGGAATGTTTCTTTAATCTTCGGCAAAAAGAGAGGGATAAGTTGTTG ATACAAGCGTAACCCTTGGTTCCCATCTGATCTTATTGTGAGGCTTGAGT AGGTCCCCTGCTGTTCGAACAGACAACATTCGCTTTGGTATGAAATATTC GATGCTTATTAGCACCCATTTTCGTTGTTTTGTTTCATATTCAGCGTTTT TTTCTAACATTCGTGTCACTGAACTCGAACTCATTAAGAGCAATAACCTC GTTttcttaaacatttttttttttgtgttattGTTGTCTAGGATTTTTAC TTAGGCTTTATAGTACCGTTCTGTTtcttaaacgtttttttatataataa ggACTCATAAACGCCAAATTGCACACAAATTACTCCCAATATGAtggtga aaattaaaacattttaacaACAATTTCGGCTTAAAACTcataaagttaag aacatcgagGGCTTAGAAAATTTgtacgttcttataaaaaatcatttatg cCGTGTATTAAGACTTTAAGGTAGCCTGCTGCGAAAGTGGATCACAgtgc ttgttttcaaaaattctctTTGTGTTGGAATTCCCTGTTCTATCTTTTGT ATTCTGTGCGTGCCTTATGTTTTTCATCTAACACCGAGAGAgcagaaaaa tgtttttataagaactagacAATTTTGGCTGAGGCTGAGACTCGGATGAG GCTGTTTTTATCATTTCGTGATTTTGGttcaaatgtttttgaaatggtct aaaaaatactttttctagCCATATTTGACAGTTGAGATTGGCATATTATT TTTAGGTTATTGATAAAAAtcaagcctcatgttcttataaaaaacgtgaa aGATAGAGTCACTTTGCTTGTACATAGATGAAAGAGCTCCCTTCACCGTA AGCTTAATCTTGTTTCTCTGTACGCGCTGATGCGCTTTTCGAATAAGTCT CGATTTGAATCAACTATAACAATTTTGTCCCCTTTTCTtgagttttataa gaacaatgtatATTGTAAATAACCGAAGTCAAGTATATTTCCCCCTCCtt tttaatgttcttataaagaattgAAGATGTACTATTAGAGCCTTCTCGTA AGGCTAGTACGCTAATGAAATTATATTCAGAAAACATCAAACAGAATAAT TTTGTATCCAACACTATACTTCTTAAAACTTttcttaatgttttttcttc ttaaaaaatcTTACTTGAAAgagatgtttttaaaaatacattGCCGACTC AAGAGACTCAAGACCGCTCTTATATAAGATTACGAGTCCGCAAAAATTGT CTTTACTTGCGTTTTCTTGTTGAACGTAACTGTAGcgcatttttcttctt tcttttaccTTATTAAGATTGTCAAAGAACATTTTTCCCGCCCGTCCCGT CCCTTTCATTTTCNAACTGTAGcgcatttttcttctttcttttaccTTAT TAAGATTGTCAAAGAACATTTTTCCCGCGCGTCCCGTCCCTTTCATTTTC ATAGCTTTTTCCCAATTCTTTAAACCTCTCTTTACCGAATTTcctctttt aatttttaaaggaCCTTAAAAGAGAATGCGCTAATATTTCTATTTCTTCG TTTATGACTCtttataaattaaattggatgaGTAAAGAAGTTTTATTTCT TTCCTGGCCATAAGCCCTTCCAATACTGAAAAGTTCCTTTTGCTAAGTAA ACCTAAGCGCTTAGGCCCATAATTCTATATAATACCCATCTAGCATCAAT TTGCTGTGAGATTTTATAGCCATAGCATAACATTTCTtatcttttaaaag attttgtttttatgttaATAAGCTGTAGAAGCTGTCTTGAAACCATAACA AAATTTGTGTGTCGGTATGTCTTGTGCATTATGAGCCgtgatagaaaaaa ataaatctttaaaaaacattgtttcaacgttcaaacTAAATCCATTAAAA GAcgttccatatttctttttactCAAACACACTCAAAAATATGGTTTTAT TTTGCCTGTGATGACTTTTTTACGAATAATTTCATGCTTATACGCAAAAG ATTAAGCAGGTTTAGAACCCCCAAAAGTCGCCcgtcttaaaaaaaattga tttctcaattacaaaaaagaaatttgtaacAAGATCTAAATTCGCTAGTC TATTAACAAATTGATATGCCGACTCTTAAAACACGTGCacctttttttaa gaaatttctcTGCTACGAGAAAAAACCCCtacatattttgtttttgttat caAATAGTCGCTCACAAAAACATTATGAAAAATAAGttcaaaaaatgtat aatttgatATCGTAAAGTCACTGGGCCGACAAACCGATTTTAAGAACACC GTCATTTTCATAAACAATAATTTTTTGCATCGCATTCTTTTCATCCTTGT TAAAAACGTTACGGTATTTCTTGCATACCTTTTGGACTTTTCGGAAATTA AACCATATTGATGCAGTTTTCTTGGGaggaaaagtattttttaaacatgG TATCAAACATTGGGGTCAGTCTTTCGATGACTACCATTAGTGTAAGATAA ATTTTCTCGTGTAGCTTCCAGACCATAGCAACTGTACTGTAGACTATAGT TCGTGNGCGACACGGTGGCTCAGAACACGGTTTTTATCCACACAGTAGTA ATAGTAACTCTTATAATTATTCCAATGATACAATACAAGACCGATACAAT ACAATGTCGTCATCATCTCACCAACGTGGTTCCTCGCGCACGCGTGAAAC GCACCCGCATCCAGATGCTGCACCACCATTAGACACTAGTAAAATTTATT CTTGGATGGAGAAAAANGTGTAGCTTCCAGACCATAGCAACTGTACTGTA GACTGTAGTTCGTGTCTTTTTGCCGCTGTCTCGTTTCATACATACAAAAC ACTTGATGGAGACTACTttgaatataataaaaaaattttccgaaattatt ttatttcttcttctttctttattATTAGCCTGGTATATAatctctctttt ctttttctcttttaacaGCGTACGCAGCGAATCAATCAAGATCGCATGAA ACCGATGAAACCGACAGACTTTGCTGCACTTTTGAcgcaaaaacttgaaa aagtttTGATCGACCGAACTAGAGATGGCCATGATAATTCGGTAAGTGAT TCTATAACAATCCTTATTTCTATCGTATCCTAACCGTATGAACTTCATGG ATGAGTGTAAAGAATTCAATGTTTAAACTATATAAATTgtaataaatctt tttcaactttttttcaatatatgaCTGTTCACTCTGAAAATTTACTTCGT TTTAGTTTCATTTCTTTATTTCGAGTTTTGCTGACCTGTCTTATAtcatt cttttcttttataGTCACACCATTCTCATGGTGACTCAATGGATCTGTCT TCAATGAAACATCATCTACCAGGTGGACACAACAGTCGAGTACCACCCCA CCATCAACCTCACATACACGATTTCGATGGCCAGAGTGAGAGTGACGCCC AATCTTGGGTGCTCTCTGACCGGCCAAGCGTCGCCGGACAATCATCACAT AGTGGCTCACACAGTggtattttaatgaaaaataaagcaaaagaaCTCAG AGATAAAATTCATCATCATATTCGAAGTGACTTGAAAGAATGTCGTTGTG CTGAGTGCCGCCTCACGCCCTCCGTACATTCGGGCGGTCGTCACGAACAC GATTCGCATGCACGACACGGTGGCTCAGAACATGGTTTTTATCCACACAG TAGTAATAGTAACTCTTATAATTATTCCAATGATACAATACAAGACCGAT ACAATACAATGTCGTCATCATCTCACCATCGTGGTTCCTCGCGCACGCGT GAAACGCACCCGCATCCAGATGCTGCACCACCATTAGACACTAGTAAAAT TTATTCTTGGATGGAGAAAAACGAACGTTACCAACATCAAAAATCGTACC CAGACCCCTCCCCGTCACCTTCTTTACGTCGAAAGAAAGCACCTATACAA TATAACACAAGTAGGTCACAGAACTCTCAACAGCCTATTGCGCAAGATAC GGGCATGCCGTTATTACCACAACCTGACCCAGACAATGTTTTACAAGAGG TTAAACGGAAACTGGAAGAACCCTCACGATCACAACAAAATCATCACCGA TCTTCaagacaacaacaacaatatcATACGCCCCATTATGAGGGCGGATA CCACCCTCATCACGATAATCAATCAATGGCTTCTGCTCCTTGGTCGATGT CTGATAACTCTTCAATTATTTCTTATAACCCTTCACAAGTTTCTACCGTA CCTTCATCTGCGTCTAGATTATGGAACGCTCAAGGTTATTACAAAGATGC CGGTAGTGAAGTCAGAGACGATCGTTGCACGCCTAGCGAAGTTCACTCGC AAGCAGCTTCTAAACACAGCGGTCCGCGTAGCGTGACACGTAGTGATCAT ATGAGCGCTGCACGCAGTGATCATCACAGTGACGTAAGATCACAATCGAC GGGAATTAGTTACGGCAGTGACGGTAGTAAAGGACGTTCTTCTTCttcta aaaataaaactgtTATCACGTATTATTACGGTAGTGAACCTATCCCGTAC CGTATTAGCGTTCCGACTACGGAGGTTACGTTGTCACAATTCAAACTCGA AACCAAACGTGGTAATTATCGCTTTTTTTTCAAGACTGTTTCCAGTGTCG ATGGTGAGGTTGTTTGGGAAGAATTCAAAAACGATGATGATGTCCTACCT AAATTTAATGATAAAATTGTTGGCAAAGTCGATAAGATCTAATTGACTTT GGTTTTTGGATTTATTTGTTGTTATTGTTTGGATTATTTCTCTTAATGAT AATCATGACGGAATTGTTGTTAATGTGGACCAAGTTTTGATTCTACCATA ATGAACTTATaatatttatgacgtaatgttttaaacAGAAGCACCCTAAA AGACCAAACAGCCGGTCTAATTTTGAATTAAACAATAAACTAGGCCCTGG CTATTTTGGGTGCTTGCGTCTGAAAAATTCCGACATGAATGATTGATCAT GAATTGATAAATgcgttgtttttttatatagaTCCTCGTGTTaatgatta cgtcatgaatattattGTCCGCTTGGTTATATTATCactgtctttttttt ttcaaatttatgctCTGCATTTAAAACTTTATCACTATTTATATTTTGCC AATTCTTCTACCCCTGTTTGATACCCCTAAatatttgttcaattttttac cTTCCTCGTACAGGTTCGGGAatcgaaattcattttgacaaatttgaact ttttgccaAGTGTCAAGATATTCTTTCCTTGCTTACTCTTGGCTTTACCT TTCCAACTTTCTTCCTTTTTCCTTTTATATTCCttcctaaattttttaaa atagatattttacaattttctccCTTTAAGTTAATATACAATATACTGAA aagagttttattttttactagATTTATCTTACTACCCCATGATTGTATGA TATTTTAAGATAAACCCCGAAATATACCCCTTTATAATTACACCCCAATA Ttgtgaaaaaatgaaataatatcaaaaaatacaacaaaaggaaaaatgtg aaaattaacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011804XLOC_011804Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021039-exon-sc0000377-1491911889:135504..135532TCONS_00021039-exon-sc0000377-1491911889:135504..135532Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1510915933:135504..135532TCONS_00021039-exon-sc0000377-1510915933:135504..135532Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1575043694:135504..135532TCONS_00021039-exon-sc0000377-1575043694:135504..135532Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1491911889:137069..137161TCONS_00021039-exon-sc0000377-1491911889:137069..137161Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1510915933:137069..137161TCONS_00021039-exon-sc0000377-1510915933:137069..137161Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1575043694:137069..137161TCONS_00021039-exon-sc0000377-1575043694:137069..137161Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1491911889:140588..141833TCONS_00021039-exon-sc0000377-1491911889:140588..141833Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1510915933:140588..141833TCONS_00021039-exon-sc0000377-1510915933:140588..141833Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1575043694:140588..141833TCONS_00021039-exon-sc0000377-1575043694:140588..141833Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1491911889:143838..143972TCONS_00021039-exon-sc0000377-1491911889:143838..143972Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1510915933:143838..143972TCONS_00021039-exon-sc0000377-1510915933:143838..143972Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1575043694:143838..143972TCONS_00021039-exon-sc0000377-1575043694:143838..143972Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1491911889:144162..144246TCONS_00021039-exon-sc0000377-1491911889:144162..144246Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1510915933:144162..144246TCONS_00021039-exon-sc0000377-1510915933:144162..144246Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1575043694:144162..144246TCONS_00021039-exon-sc0000377-1575043694:144162..144246Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1491911889:147372..147494TCONS_00021039-exon-sc0000377-1491911889:147372..147494Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1510915933:147372..147494TCONS_00021039-exon-sc0000377-1510915933:147372..147494Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1575043694:147372..147494TCONS_00021039-exon-sc0000377-1575043694:147372..147494Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1491911889:147718..149964TCONS_00021039-exon-sc0000377-1491911889:147718..149964Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1510915933:147718..149964TCONS_00021039-exon-sc0000377-1510915933:147718..149964Clytia hemisphaericaexon
TCONS_00021039-exon-sc0000377-1575043694:147718..149964TCONS_00021039-exon-sc0000377-1575043694:147718..149964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:135504..149964 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.000202158 0.000320282 0 5.83252e-08 0 0.733016 2.01042e-08 0 0.76418 0.0238383 0 0 2.39075e-08 2.54173e-05 0.595108 0.959399 6.76362e-06 0.0137991 0 0.12874 0 0 0 3.48596e-09 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021039 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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