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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021127 ID=TCONS_00021127|Name=TCONS_00021127|organism=Clytia hemisphaerica|type=transcript|length=2701bp
GTGCCGTGATATCTGATGTATGTTTTTGCTGACTTCCTCAACTATCTACT
ATTGGGTTATATGATATCTTACAAGTAAAAACTATTGCCTTAGAACACCA
TAGAGAGgcttgttttggtttgttttgttgTTAACAGACAACTTGTTGAT
TTGTCTGTTTCACACATGAAAAGATTTTATAAGACCTCAGGATCATGAAA
TTCCATCTCTTATATCTATGTAACAGAAAAAAAGACATGACCGTGCTTAC
AGACTCGCAACTAAAAAGACTTAAAGATCATAAATATTGCTCAGAAGGCA
AATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAACTATGTTGTCAGT
AAAATGCCACTGTGGGTGGCCCCAAATTTGATCACCATCTCTGGACTAAT
TATCAATGTTTTAACCAGTGCTTTGATATTGTTGTATTCACCAAAGGCAG
ATTCTGATGAGGTTCCTGGTTTTGTCTTTATCCTCTGTGCTATTGGTCTT
TTCCTGTACCAGACCCTAGATGCAATCGATGGCAAACAAGCTAGAAGAAC
CAACACTTCAACTCCAATGGGTGAACTCTTTGATCACGGATGTGATGCAG
TATCAACCCTATTCTTATCAACCTCAATAGCATGTGCATTGTCTTTAGGA
ACATATCCTAGATActtgttcttctttttcatcaatAATGTGGCTATTTT
TTATCTGGCACATTGGCAGACGTACTGTTTTGGAAAGCTGATGTTTGGTT
TGATTGATGTTACAGAAGCGCAAGTCCAAGCAATGGCTATCTATGTTTTT
GCTGGTATTTACGGACCACAGTTCTTCAGACAAGAAGTGATGGTTCTACA
GTTTCGAATGCCACTTGCGAAGCTTTTAGTATATGTTTGTGCATTTACTG
CTGTCGTATACACACTCACAACGTTCCGAAAAATATTCAAAGGAGGTGCC
GGTAAAAATGGTACCACCGTTGCGACAACAAGTGTGTTGACACCAGTAGT
ACCTATTGGCATTGTCATCGCATGCGCATTCTATGTCTACAAACATAGCA
CAGACAACCTGTTTCATACATCACCAGTACTCATCATGATGATGTTTGGG
TTTTCTACAGCTAAAATTACTTGCAATCTTGTGATCGCTTCAATGTCAAA
ATCACCATTAGATATGCTCGACTCTACAATGTTGGGGCCAATATCTCTGG
CTTGCTTCAATTATTTCAGTGTACAAAGTCTACTCTCTTATGTGGCACTT
GATTCAGTAATCACAGAATACGTTTTTCTAATAGCTCTTTTTGTATACAG
TGTTTTGAACTTTGTGGTGTTCAGTGTGCAAGTGTGCCAAGAAATCAGTG
AAAATTTTGGTATTGCCGTTTTTACTATTCCTTATGAAAAGGAAAAAGAT
GATTAAGATATATAAATTATAATGATTATGAAAACATAATTCGAGATGAA
AATAATTCGTAGcaaaagcaatttttttaatAGCTTTCCTTTAGTTTTTA
TACATATTTTACATAGCTTATTATCATTATATTGttattaattattatta
ttgttaatcGACGGGTTTAGATGAGTAGAATTATAGTGAATTTTTATTTA
ATCATAAATTGAGTATAGCTTTAAGAATTTTTCATTctgtttgatatttt
ttaaaggCGTTTTCCCACTAcattttgaaatggttttttttaagttttct
aaAACATGTCAAAATGCAATCTGCTATACCATATGTAGCCCGGATCTTTT
AGTAATTGTAAATAACTCTTGGTCTATACATAATGCTTCAATCTAGGAGT
CCAGtggtaaatttgaaaaaatattggatTAGCAGACAAAAGCATGCATC
GTTGTTATCACTAGTTTTTGTTGTACTTATTTTTcgtttcttttgtattt
tatgGCATGCAAATAATTGTGTACAATCTTTATTGTGCCTTTTTACTCTT
TtatcatttcaaaaattttgttctgTTTCTATAACATCATCATTATGAAT
TTCCTGAGGCTGCAGCAGCAGGCTAAGTGTTCTTAAATGGATGAATTCTA
TACAGGATaaggtcaaagtagtaaaaaatggATTAAAGCATACCtcaatt
atttcttaaaataaagaattagGACAACTTTAGCCTTTtaattggaaaaa
tgaaaaaaaattgagccTAAATAAAATTATTCTGGTTCTGAAAAAGAGTA
TCAGTTTATTAAACTCTTATAGATTCAACTCTTATAGGCTTTAGAACATT
ATAAAAGCGATAAAATTGTCAAAcataatttttgatttgatttggtgATC
CTTTTGTTCTATCAATCTCATATTATATTGAACTTTGatactttatgatt
ttttattttattacatGTATAGTCTATTAGTTAGTTTCTATTATATTACC
TGGAGATATCAATAAGAATCAGACAGCTTGGATTTGAAGTCCTCTATCAT
CATTCACTGTAATTTTGTCTTTAAATTTCAACGAAGAAACAATTAGATAA
TTTGAGTAGTTATGTAAGTGTGATGAGGtacaccattttgaaaaatatta
catCAATCCTCTTTAATGCTGTTTGCCAAATGACCATACTGTGGGAAAGG
TATTCAGCTATGGCAAAATTATCTATTAAGTACTAGGACCCTTTTTATCA
CCATTTTTAACTTCCTATAATACCAACCCACATTGCTAAATATAGTGGAG
C Run BLAST on NCBI protein sequence of TCONS_00021127-protein >TCONS_00021127-protein ID=TCONS_00021127-protein|Name=TCONS_00021127-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MKFHLLYLCNRKKDMTVLTDSQLKRLKDHKYCSEGKSALEVFFQPFWNYV
VSKMPLWVAPNLITISGLIINVLTSALILLYSPKADSDEVPGFVFILCAI
GLFLYQTLDAIDGKQARRTNTSTPMGELFDHGCDAVSTLFLSTSIACALS
LGTYPRYLFFFFINNVAIFYLAHWQTYCFGKLMFGLIDVTEAQVQAMAIY
VFAGIYGPQFFRQEVMVLQFRMPLAKLLVYVCAFTAVVYTLTTFRKIFKG
GAGKNGTTVATTSVLTPVVPIGIVIACAFYVYKHSTDNLFHTSPVLIMMM
FGFSTAKITCNLVIASMSKSPLDMLDSTMLGPISLACFNYFSVQSLLSYV
ALDSVITEYVFLIALFVYSVLNFVVFSVQVCQEISENFGIAVFTIPYEKE
KDD Run BLAST on NCBI transcript from alignment at sc0000378:73752..79188- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021127 ID=TCONS_00021127|Name=TCONS_00021127|organism=Clytia hemisphaerica|type=transcript|length=5437bp|location=Sequence derived from alignment at sc0000378:73752..79188- (Clytia hemisphaerica)
GTGCCGTGATATCTGATGTATGTTTTTGCTGACTTCCTCAACTATCTACT
ATTGGGTTATATGATATCTTACAAGTAAAAACTATTGCCTTAGAACACCA
TAGAGAGGCTTGTTTTGGTTTGTTTTGTTGTTAACAGACAACTTGTTGAT
TTGTCTGTTTCACACATGAAAAGATTTTATAAGACCTCAGGATCATGAAA
TTCCATCTCTTATATCTATGTAACAGAAAAAAAGACATGACCGTGCTTAC
AGACTCGCAACTAAAAAGACTTAAAGATCATAAATATTGCTCAGAAGGCA
AATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAACTATGTTGTCAGT
AAAATGCCACTGTGGGTGGCCCCAAATTTGATCACCATCTCTGGACTAAT
TATCAATGTTTTAACCAGTGCTTTGATATTGTTGTATTCACCAAAGGCAG
ATTCTGATGAGGTGGGTATTATTCACATTTTTTGCATATATAAATTTTGT
GACATTTTCCTTGTGTGTTTTCATTATCCATTTTCCTATAAACTTTGTGC
TAGGTTTGCAAAACGCTCCCCTGTCAACCATCTGTTTTGTTTGAACAAAT
CTGTTTGCAATCAACAATCATTTCTTTTCTAGGTTCCTGGTTTTGTCTTT
ATCCTCTGTGCTATTGGTCTTTTCCTGTACCAGACCCTAGATGCAATCGA
TGGCAAACAAGCTAGAAGAACCAACACTTCAACTCCAATGGGTGAACTCT
TTGATCACGGATGTGATGCAGTATCAACCCTATTCTTATCAACCTCAATA
GCATGTGCATTGTCTTTAGGAACATATCCTAGATACTTGTTCTTCTTTTT
CATCAATAATGTGGCTATTTTTTATCTGGCACATTGGCAGACGTACTGTT
TTGGAAAGCTGATGTTTGGTTTGTAAGGATCCTTTTTGACAATTTAAGAT
TCCTCTTTGGTCTTTTAAATAGGAAAAGATACAAGATGAGAATTTAATTA
AGTCTTTAACTTAAATAACCCATCCCCTGCAATAACTTTGGTGTTTGGCT
CTACGTTATCCTCTAATACATTTGCACATCTCTCAAAGATCTTCATCTGT
TTGTTTTTATATGTTTGCCTCTATCAATATTTTCCCATCAAACATAATCA
AGCATATCACATACCTACTCTTAACCTTTTGAATCGAATTCTCCACCACA
AGACAACAGTTCAGACTAAACCTTGCATCCTTCTACTCATTCCATAGGAT
TGATGTTACAGAAGCGCAAGTCCAAGCAATGGCTATCTATGTTTTTGCTG
GTATTTACGGACCACAGTTCTTCAGACAAGAAGTAAGAAATGAAGGAAAT
GCGTGATTTAAGACTAAGTTAGATTTTATTGGTGCAGAGCTAGAACCATT
CCATCTGAAATTAGAAGAGTCCTTTAATTCAAACTTGTTATCCTTTAAAA
TGGGCTAAATGGCCCAAATCAATATTTGTATTTGTAGTGTTAAAAGTACT
TCCGTCTCAGCGTCTCACTGTCGTTCTTTACAAGTCTCCTCTCCCCTTAA
TAAAATCACCACAATCATCCAATCCCAGCCAACCAAAATCTTTGAGCAGA
GGTAGAACCACCTCTTTATACGGGTCACCACTTTTTTTTAAAACAGTTTT
GTATTGACCCATATGGAGAAGCTAAATTTCTAGAAAATCCAATAAGAAAT
ACTGACATAGCTTAATCCATAGTTAAATCACAGGTTAGTGAAAATGCCTT
GTTGTTGGCTATATGCCCAAGGTTCTCACAAATCAAGCTATTAAAAAACT
TAAAACTTAAAACTGATGCTGAATTATTTTCATTATTTTCTAAGTATACT
TTTAATGTTTCAGGTGATGGTTCTACAGTTTCGAATGCCACTTGCGAAGC
TTTTAGTATATGTTTGTGCATTTACTGCTGTCGTATACACACTCACAACG
TTCCGAAAAATATTCAAAGGAGGTGCCGGTAAAAATGGTACCACCGTTGC
GGTATGAAAGTTTTTATTTTGATAAATCTTCCCTGCTCTGAAAGCTGATT
TAGATTTTTAGGATTATACGTAGGAATTTTGGCTTAAATGTATGTTATGT
TTCTTAGAAAACAGTGCTTCTTTCTGTCTAATCAGTGAATTTTTTTCTTA
TAATAACAAACTTTTACCAGCTTCTGAATAGCTACAATTCTTATTGTTAG
CGCAAGGTTTCAAATTTTGTTTTCATACTTCATATTTATAGACAACAAGT
GTGTTGACACCAGTAGTACCTATTGGCATTGTCATCGCATGCGCATTCTA
TGTCTACAAACATAGCACAGACAACCTGTTTCATACATCACCAGTACTCA
TCATGATGATGTTTGGGTTTTCTACAGCTAAAATTACTTGCAATCTTGTG
GTAAGTCTTTGTATTACTAACCAAGTATGAAAAAGGAGTACGACAATCTA
AAGGCGAAAGGCAAATATTTCAAAAATTACTATGGCTCAAGCATTAACGC
AATACTTTGCGTTAAATAATTTTAGTAGTTTTGTAAGGGTGATGAGGTAC
ACCATTTTGAAAAAGTGAAATTATATCAATCCTCTGTAATGCTATTTGCC
AAATGGCCATACTGTGGTGAAAGGTATTTAGCTATGGCAAAACCATCTGT
TAATAAGTACTAGCATCCTTTCTTATCACCATCTTTAAATACACCTTTTC
GACCGTTGCCATCAATTGACGCGCGGGCATTTTATGTCCGATTTATCCCA
CTAAAACCGTCCCAGTCCTTTTCTCGCACCTATTGACAATAGAAAATGTG
TCAAAAAAGGATTGGATCGAGTTTAGTGGGACAAGAAAATGCACAGCAAA
AAATTCCACGTTTTAAAAGCACGTGGAAGAAAATGTCCAAATTCCCAGCA
AAAAATTCCACGTTTTAAACGCACTTGGAAGAAAATGTCCAAATTCACAA
CCAAAGGTTTTCCACGTTTAAAAATGCACGTGGAAGAAAATGTCCAAATT
CACAACCAAAAGTTTTCCACGTTTTAAACGCATGTGGAAGAAAATGTTCA
AATTCACAGCAAAAATTTCCACGTTTTCAACACACGTGCAAGAGAATGTC
CAAATTCACAACCAAAAGTTTTCCACGTAGCATTTTTAAAACGGTCGAAA
AGGTGTATTCCTTACATATCAACCAACTTTGCTAAATGCAGTGGAGTCTA
ACTTAAATATGCACTGGGAGCGCATATTTGTTTGAGTTTTAAGGAAATGT
CAAGTTTTTTGAGTAAATTTTATGAGGTTTTGTCAACTGAAGGGATCAGA
AAACGTTCGATTTAAGGAGACATTCGAGCTGTAAAGCTTCGAATAATGGA
GACTTCACTGTATTTACAATTGTGTAGATATTGACAAAATGTAGACTTGG
ATAATTTTGATTAACTTTCTCATTCTTTTCGATTTCAGATCGCTTCAATG
TCAAAATCACCATTAGATATGCTCGACTCTACAATGTTGGGGCCAATATC
TCTGGCTTGCTTCAATTATTTCAGTGTACAAAGTCTACTCTCTTATGTGG
CACTTGATTCAGTAATCACAGAATACGTTTTTCTAATAGCTCTTTTTGTA
AGTAATTACTTCTTCCTTTCTTCAATTTAATGGTCTGAAAACCGTCTTAA
GGGCATCCTTATCATTATCGGATGTTTATTCTTTGGGTGATATTTTTGCA
GTTACAGTCCACTCTCTCTAATTATATTTCTGTAATTCGAACTAAAATAT
TGGTCCTCTTCAGATGGGGGATGGTATAAGTTACTCTTCGTAATTCAAAT
CTTTCTCTAGTTCGAAGAAAACTTTTGGGCCCTTGAAGATCAAATCAGCG
AGAGTCAATTATATACTTTTGAAATATTTTCAAGCTTTTTGTAAACGTCA
TGCTGTGTTTATAATGCATTCATCAAAAAATATTTATAAGGTCTCCAAAA
ATTAAAGCCAGCCATACAATACATGCATAAACTCTTGTTATTATGTTAGA
AAATTTACTTTAACTTCTTCTTCTACAGGTATACAGTGTTTTGAACTTTG
TGGTGTTCAGTGTGCAAGTGTGCCAAGAAATCAGTGAAAATTTTGGTATT
GCCGTTTTTACTATTCCTTATGAAAAGGAAAAAGATGATTAAGATATATA
AATTATAATGATTATGAAAACATAATTCGAGATGAAAATAATTCGTAGCA
AAAGCAATTTTTTTAATAGCTTTCCTTTAGTTTTTATACATATTTTACAT
AGCTTATTATCATTATATTGTTATTAATTATTATTATTGTTAATCGACGG
GTTTAGATGAGTAGAATTATAGTGAATTTTTATTTAATCATAAATTGAGT
ATAGCTTTAAGAATTTTTCATTCTGTTTGATATTTTTTAAAGGCGTTTTC
CCACTACATTTTGAAATGGTTTTTTTTAAGTTTTCTAAAACATGTCAAAA
TGCAATCTGCTATACCATATGTAGCCCGGATCTTTTAGTAATTGTAAATA
ACTCTTGGTCTATACATAATGCTTCAATCTAGGAGTCCAGTGGTAAATTT
GAAAAAATATTGGATTAGCAGACAAAAGCATGCATCGTTGTTATCACTAG
TTTTTGTTGTACTTATTTTTCGTTTCTTTTGTATTTTATGGCATGCAAAT
AATTGTGTACAATCTTTATTGTGCCTTTTTACTCTTTTATCATTTCAAAA
ATTTTGTTCTGTTTCTATAACATCATCATTATGAATTTCCTGAGGCTGCA
GCAGCAGGCTAAGTGTTCTTAAATGGATGAATTCTATACAGGATAAGGTC
AAAGTAGTAAAAAATGGATTAAAGCATACCTCAATTATTTCTTAAAATAA
AGAATTAGGACAACTTTAGCCTTTTAATTGGAAAAATGAAAAAAAATTGA
GCCTAAATAAAATTATTCTGGTTCTGAAAAAGAGTATCAGTTTATTAAAC
TCTTATAGATTCAACTCTTATAGGCTTTAGAACATTATAAAAGCGATAAA
ATTGTCAAACATAATTTTTGATTTGATTTGGTGATCCTTTTGTTCTATCA
ATCTCATATTATATTGAACTTTGATACTTTATGATTTTTTATTTTATTAC
ATGTATAGTCTATTAGTTAGTTTCTATTATATTACCTGGAGATATCAATA
AGAATCAGACAGCTTGGATTTGAAGTCCTCTATCATCATTCACTGTAATT
TTGTCTTTAAATTTCAACGAAGAAACAATTAGATAATTTGAGTAGTTATG
TAAGTGTGATGAGGTACACCATTTTGAAAAATATTACATCAATCCTCTTT
AATGCTGTTTGCCAAATGACCATACTGTGGGAAAGGTATTCAGCTATGGC
AAAATTATCTATTAAGTACTAGGACCCTTTTTATCACCATTTTTAACTTC
CTATAATACCAACCCACATTGCTAAATATAGTGGAGC Coding sequence (CDS) from alignment at sc0000378:73752..79188- >TCONS_00021127 ID=TCONS_00021127|Name=TCONS_00021127|organism=Clytia hemisphaerica|type=CDS|length=8484bp|location=Sequence derived from alignment at sc0000378:73752..79188- (Clytia hemisphaerica)
GTATACAGTGTTTTGAACTTTGTGGTGTTCAGTGTGCAAGTGTGCCAAGA
AATCAGTGAAAATTTTGGTATTGCCGTTTTTACTATTCCTTATGAAAAGG
AAAAAGATGATTAAATCGCTTCAATGTCAAAATCACCATTAGATATGCTC
GACTCTACAATGTTGGGGCCAATATCTCTGGCTTGCTTCAATTATTTCAG
TGTACAAAGTCTACTCTCTTATGTGGCACTTGATTCAGTAATCACAGAAT
ACGTTTTTCTAATAGCTCTTTTTACAACAAGTGTGTTGACACCAGTAGTA
CCTATTGGCATTGTCATCGCATGCGCATTCTATGTCTACAAACATAGCAC
AGACAACCTGTTTCATACATCACCAGTACTCATCATGATGATGTTTGGGT
TTTCTACAGCTAAAATTACTTGCAATCTTGTGGTGATGGTTCTACAGTTT
CGAATGCCACTTGCGAAGCTTTTAGTATATGTTTGTGCATTTACTGCTGT
CGTATACACACTCACAACGTTCCGAAAAATATTCAAAGGAGGTGCCGGTA
AAAATGGTACCACCGTTGCGGATTGATGTTACAGAAGCGCAAGTCCAAGC
AATGGCTATCTATGTTTTTGCTGGTATTTACGGACCACAGTTCTTCAGAC
AAGAAGTTCCTGGTTTTGTCTTTATCCTCTGTGCTATTGGTCTTTTCCTG
TACCAGACCCTAGATGCAATCGATGGCAAACAAGCTAGAAGAACCAACAC
TTCAACTCCAATGGGTGAACTCTTTGATCACGGATGTGATGCAGTATCAA
CCCTATTCTTATCAACCTCAATAGCATGTGCATTGTCTTTAGGAACATAT
CCTAGATACTTGTTCTTCTTTTTCATCAATAATGTGGCTATTTTTTATCT
GGCACATTGGCAGACGTACTGTTTTGGAAAGCTGATGTTTGGTTTATGAA
ATTCCATCTCTTATATCTATGTAACAGAAAAAAAGACATGACCGTGCTTA
CAGACTCGCAACTAAAAAGACTTAAAGATCATAAATATTGCTCAGAAGGC
AAATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAACTATGTTGTCAG
TAAAATGCCACTGTGGGTGGCCCCAAATTTGATCACCATCTCTGGACTAA
TTATCAATGTTTTAACCAGTGCTTTGATATTGTTGTATTCACCAAAGGCA
GATTCTGATGAGGTATACAGTGTTTTGAACTTTGTGGTGTTCAGTGTGCA
AGTGTGCCAAGAAATCAGTGAAAATTTTGGTATTGCCGTTTTTACTATTC
CTTATGAAAAGGAAAAAGATGATTAAATCGCTTCAATGTCAAAATCACCA
TTAGATATGCTCGACTCTACAATGTTGGGGCCAATATCTCTGGCTTGCTT
CAATTATTTCAGTGTACAAAGTCTACTCTCTTATGTGGCACTTGATTCAG
TAATCACAGAATACGTTTTTCTAATAGCTCTTTTTACAACAAGTGTGTTG
ACACCAGTAGTACCTATTGGCATTGTCATCGCATGCGCATTCTATGTCTA
CAAACATAGCACAGACAACCTGTTTCATACATCACCAGTACTCATCATGA
TGATGTTTGGGTTTTCTACAGCTAAAATTACTTGCAATCTTGTGGTGATG
GTTCTACAGTTTCGAATGCCACTTGCGAAGCTTTTAGTATATGTTTGTGC
ATTTACTGCTGTCGTATACACACTCACAACGTTCCGAAAAATATTCAAAG
GAGGTGCCGGTAAAAATGGTACCACCGTTGCGGATTGATGTTACAGAAGC
GCAAGTCCAAGCAATGGCTATCTATGTTTTTGCTGGTATTTACGGACCAC
AGTTCTTCAGACAAGAAGTTCCTGGTTTTGTCTTTATCCTCTGTGCTATT
GGTCTTTTCCTGTACCAGACCCTAGATGCAATCGATGGCAAACAAGCTAG
AAGAACCAACACTTCAACTCCAATGGGTGAACTCTTTGATCACGGATGTG
ATGCAGTATCAACCCTATTCTTATCAACCTCAATAGCATGTGCATTGTCT
TTAGGAACATATCCTAGATACTTGTTCTTCTTTTTCATCAATAATGTGGC
TATTTTTTATCTGGCACATTGGCAGACGTACTGTTTTGGAAAGCTGATGT
TTGGTTTATGAAATTCCATCTCTTATATCTATGTAACAGAAAAAAAGACA
TGACCGTGCTTACAGACTCGCAACTAAAAAGACTTAAAGATCATAAATAT
TGCTCAGAAGGCAAATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAA
CTATGTTGTCAGTAAAATGCCACTGTGGGTGGCCCCAAATTTGATCACCA
TCTCTGGACTAATTATCAATGTTTTAACCAGTGCTTTGATATTGTTGTAT
TCACCAAAGGCAGATTCTGATGAGGTATACAGTGTTTTGAACTTTGTGGT
GTTCAGTGTGCAAGTGTGCCAAGAAATCAGTGAAAATTTTGGTATTGCCG
TTTTTACTATTCCTTATGAAAAGGAAAAAGATGATTAAATCGCTTCAATG
TCAAAATCACCATTAGATATGCTCGACTCTACAATGTTGGGGCCAATATC
TCTGGCTTGCTTCAATTATTTCAGTGTACAAAGTCTACTCTCTTATGTGG
CACTTGATTCAGTAATCACAGAATACGTTTTTCTAATAGCTCTTTTTACA
ACAAGTGTGTTGACACCAGTAGTACCTATTGGCATTGTCATCGCATGCGC
ATTCTATGTCTACAAACATAGCACAGACAACCTGTTTCATACATCACCAG
TACTCATCATGATGATGTTTGGGTTTTCTACAGCTAAAATTACTTGCAAT
CTTGTGGTGATGGTTCTACAGTTTCGAATGCCACTTGCGAAGCTTTTAGT
ATATGTTTGTGCATTTACTGCTGTCGTATACACACTCACAACGTTCCGAA
AAATATTCAAAGGAGGTGCCGGTAAAAATGGTACCACCGTTGCGGATTGA
TGTTACAGAAGCGCAAGTCCAAGCAATGGCTATCTATGTTTTTGCTGGTA
TTTACGGACCACAGTTCTTCAGACAAGAAGTTCCTGGTTTTGTCTTTATC
CTCTGTGCTATTGGTCTTTTCCTGTACCAGACCCTAGATGCAATCGATGG
CAAACAAGCTAGAAGAACCAACACTTCAACTCCAATGGGTGAACTCTTTG
ATCACGGATGTGATGCAGTATCAACCCTATTCTTATCAACCTCAATAGCA
TGTGCATTGTCTTTAGGAACATATCCTAGATACTTGTTCTTCTTTTTCAT
CAATAATGTGGCTATTTTTTATCTGGCACATTGGCAGACGTACTGTTTTG
GAAAGCTGATGTTTGGTTTATGAAATTCCATCTCTTATATCTATGTAACA
GAAAAAAAGACATGACCGTGCTTACAGACTCGCAACTAAAAAGACTTAAA
GATCATAAATATTGCTCAGAAGGCAAATCGGCATTGGAGGTTTTCTTCCA
ACCTTTTTGGAACTATGTTGTCAGTAAAATGCCACTGTGGGTGGCCCCAA
ATTTGATCACCATCTCTGGACTAATTATCAATGTTTTAACCAGTGCTTTG
ATATTGTTGTATTCACCAAAGGCAGATTCTGATGAGGTATACAGTGTTTT
GAACTTTGTGGTGTTCAGTGTGCAAGTGTGCCAAGAAATCAGTGAAAATT
TTGGTATTGCCGTTTTTACTATTCCTTATGAAAAGGAAAAAGATGATTAA
ATCGCTTCAATGTCAAAATCACCATTAGATATGCTCGACTCTACAATGTT
GGGGCCAATATCTCTGGCTTGCTTCAATTATTTCAGTGTACAAAGTCTAC
TCTCTTATGTGGCACTTGATTCAGTAATCACAGAATACGTTTTTCTAATA
GCTCTTTTTACAACAAGTGTGTTGACACCAGTAGTACCTATTGGCATTGT
CATCGCATGCGCATTCTATGTCTACAAACATAGCACAGACAACCTGTTTC
ATACATCACCAGTACTCATCATGATGATGTTTGGGTTTTCTACAGCTAAA
ATTACTTGCAATCTTGTGGTGATGGTTCTACAGTTTCGAATGCCACTTGC
GAAGCTTTTAGTATATGTTTGTGCATTTACTGCTGTCGTATACACACTCA
CAACGTTCCGAAAAATATTCAAAGGAGGTGCCGGTAAAAATGGTACCACC
GTTGCGGATTGATGTTACAGAAGCGCAAGTCCAAGCAATGGCTATCTATG
TTTTTGCTGGTATTTACGGACCACAGTTCTTCAGACAAGAAGTTCCTGGT
TTTGTCTTTATCCTCTGTGCTATTGGTCTTTTCCTGTACCAGACCCTAGA
TGCAATCGATGGCAAACAAGCTAGAAGAACCAACACTTCAACTCCAATGG
GTGAACTCTTTGATCACGGATGTGATGCAGTATCAACCCTATTCTTATCA
ACCTCAATAGCATGTGCATTGTCTTTAGGAACATATCCTAGATACTTGTT
CTTCTTTTTCATCAATAATGTGGCTATTTTTTATCTGGCACATTGGCAGA
CGTACTGTTTTGGAAAGCTGATGTTTGGTTTATGAAATTCCATCTCTTAT
ATCTATGTAACAGAAAAAAAGACATGACCGTGCTTACAGACTCGCAACTA
AAAAGACTTAAAGATCATAAATATTGCTCAGAAGGCAAATCGGCATTGGA
GGTTTTCTTCCAACCTTTTTGGAACTATGTTGTCAGTAAAATGCCACTGT
GGGTGGCCCCAAATTTGATCACCATCTCTGGACTAATTATCAATGTTTTA
ACCAGTGCTTTGATATTGTTGTATTCACCAAAGGCAGATTCTGATGAGGT
ATACAGTGTTTTGAACTTTGTGGTGTTCAGTGTGCAAGTGTGCCAAGAAA
TCAGTGAAAATTTTGGTATTGCCGTTTTTACTATTCCTTATGAAAAGGAA
AAAGATGATTAAATCGCTTCAATGTCAAAATCACCATTAGATATGCTCGA
CTCTACAATGTTGGGGCCAATATCTCTGGCTTGCTTCAATTATTTCAGTG
TACAAAGTCTACTCTCTTATGTGGCACTTGATTCAGTAATCACAGAATAC
GTTTTTCTAATAGCTCTTTTTACAACAAGTGTGTTGACACCAGTAGTACC
TATTGGCATTGTCATCGCATGCGCATTCTATGTCTACAAACATAGCACAG
ACAACCTGTTTCATACATCACCAGTACTCATCATGATGATGTTTGGGTTT
TCTACAGCTAAAATTACTTGCAATCTTGTGGTGATGGTTCTACAGTTTCG
AATGCCACTTGCGAAGCTTTTAGTATATGTTTGTGCATTTACTGCTGTCG
TATACACACTCACAACGTTCCGAAAAATATTCAAAGGAGGTGCCGGTAAA
AATGGTACCACCGTTGCGGATTGATGTTACAGAAGCGCAAGTCCAAGCAA
TGGCTATCTATGTTTTTGCTGGTATTTACGGACCACAGTTCTTCAGACAA
GAAGTTCCTGGTTTTGTCTTTATCCTCTGTGCTATTGGTCTTTTCCTGTA
CCAGACCCTAGATGCAATCGATGGCAAACAAGCTAGAAGAACCAACACTT
CAACTCCAATGGGTGAACTCTTTGATCACGGATGTGATGCAGTATCAACC
CTATTCTTATCAACCTCAATAGCATGTGCATTGTCTTTAGGAACATATCC
TAGATACTTGTTCTTCTTTTTCATCAATAATGTGGCTATTTTTTATCTGG
CACATTGGCAGACGTACTGTTTTGGAAAGCTGATGTTTGGTTTATGAAAT
TCCATCTCTTATATCTATGTAACAGAAAAAAAGACATGACCGTGCTTACA
GACTCGCAACTAAAAAGACTTAAAGATCATAAATATTGCTCAGAAGGCAA
ATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAACTATGTTGTCAGTA
AAATGCCACTGTGGGTGGCCCCAAATTTGATCACCATCTCTGGACTAATT
ATCAATGTTTTAACCAGTGCTTTGATATTGTTGTATTCACCAAAGGCAGA
TTCTGATGAGGTATACAGTGTTTTGAACTTTGTGGTGTTCAGTGTGCAAG
TGTGCCAAGAAATCAGTGAAAATTTTGGTATTGCCGTTTTTACTATTCCT
TATGAAAAGGAAAAAGATGATTAAATCGCTTCAATGTCAAAATCACCATT
AGATATGCTCGACTCTACAATGTTGGGGCCAATATCTCTGGCTTGCTTCA
ATTATTTCAGTGTACAAAGTCTACTCTCTTATGTGGCACTTGATTCAGTA
ATCACAGAATACGTTTTTCTAATAGCTCTTTTTACAACAAGTGTGTTGAC
ACCAGTAGTACCTATTGGCATTGTCATCGCATGCGCATTCTATGTCTACA
AACATAGCACAGACAACCTGTTTCATACATCACCAGTACTCATCATGATG
ATGTTTGGGTTTTCTACAGCTAAAATTACTTGCAATCTTGTGGTGATGGT
TCTACAGTTTCGAATGCCACTTGCGAAGCTTTTAGTATATGTTTGTGCAT
TTACTGCTGTCGTATACACACTCACAACGTTCCGAAAAATATTCAAAGGA
GGTGCCGGTAAAAATGGTACCACCGTTGCGGATTGATGTTACAGAAGCGC
AAGTCCAAGCAATGGCTATCTATGTTTTTGCTGGTATTTACGGACCACAG
TTCTTCAGACAAGAAGTTCCTGGTTTTGTCTTTATCCTCTGTGCTATTGG
TCTTTTCCTGTACCAGACCCTAGATGCAATCGATGGCAAACAAGCTAGAA
GAACCAACACTTCAACTCCAATGGGTGAACTCTTTGATCACGGATGTGAT
GCAGTATCAACCCTATTCTTATCAACCTCAATAGCATGTGCATTGTCTTT
AGGAACATATCCTAGATACTTGTTCTTCTTTTTCATCAATAATGTGGCTA
TTTTTTATCTGGCACATTGGCAGACGTACTGTTTTGGAAAGCTGATGTTT
GGTTTATGAAATTCCATCTCTTATATCTATGTAACAGAAAAAAAGACATG
ACCGTGCTTACAGACTCGCAACTAAAAAGACTTAAAGATCATAAATATTG
CTCAGAAGGCAAATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAACT
ATGTTGTCAGTAAAATGCCACTGTGGGTGGCCCCAAATTTGATCACCATC
TCTGGACTAATTATCAATGTTTTAACCAGTGCTTTGATATTGTTGTATTC
ACCAAAGGCAGATTCTGATGAGGTATACAGTGTTTTGAACTTTGTGGTGT
TCAGTGTGCAAGTGTGCCAAGAAATCAGTGAAAATTTTGGTATTGCCGTT
TTTACTATTCCTTATGAAAAGGAAAAAGATGATTAAATCGCTTCAATGTC
AAAATCACCATTAGATATGCTCGACTCTACAATGTTGGGGCCAATATCTC
TGGCTTGCTTCAATTATTTCAGTGTACAAAGTCTACTCTCTTATGTGGCA
CTTGATTCAGTAATCACAGAATACGTTTTTCTAATAGCTCTTTTTACAAC
AAGTGTGTTGACACCAGTAGTACCTATTGGCATTGTCATCGCATGCGCAT
TCTATGTCTACAAACATAGCACAGACAACCTGTTTCATACATCACCAGTA
CTCATCATGATGATGTTTGGGTTTTCTACAGCTAAAATTACTTGCAATCT
TGTGGTGATGGTTCTACAGTTTCGAATGCCACTTGCGAAGCTTTTAGTAT
ATGTTTGTGCATTTACTGCTGTCGTATACACACTCACAACGTTCCGAAAA
ATATTCAAAGGAGGTGCCGGTAAAAATGGTACCACCGTTGCGGATTGATG
TTACAGAAGCGCAAGTCCAAGCAATGGCTATCTATGTTTTTGCTGGTATT
TACGGACCACAGTTCTTCAGACAAGAAGTTCCTGGTTTTGTCTTTATCCT
CTGTGCTATTGGTCTTTTCCTGTACCAGACCCTAGATGCAATCGATGGCA
AACAAGCTAGAAGAACCAACACTTCAACTCCAATGGGTGAACTCTTTGAT
CACGGATGTGATGCAGTATCAACCCTATTCTTATCAACCTCAATAGCATG
TGCATTGTCTTTAGGAACATATCCTAGATACTTGTTCTTCTTTTTCATCA
ATAATGTGGCTATTTTTTATCTGGCACATTGGCAGACGTACTGTTTTGGA
AAGCTGATGTTTGGTTTATGAAATTCCATCTCTTATATCTATGTAACAGA
AAAAAAGACATGACCGTGCTTACAGACTCGCAACTAAAAAGACTTAAAGA
TCATAAATATTGCTCAGAAGGCAAATCGGCATTGGAGGTTTTCTTCCAAC
CTTTTTGGAACTATGTTGTCAGTAAAATGCCACTGTGGGTGGCCCCAAAT
TTGATCACCATCTCTGGACTAATTATCAATGTTTTAACCAGTGCTTTGAT
ATTGTTGTATTCACCAAAGGCAGATTCTGATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021127-exon-sc0000378-1575043694:78728..79188 | TCONS_00021127-exon-sc0000378-1575043694:78728..79188 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1575043694:78267..78556 | TCONS_00021127-exon-sc0000378-1575043694:78267..78556 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1575043694:77857..77941 | TCONS_00021127-exon-sc0000378-1575043694:77857..77941 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1575043694:77188..77325 | TCONS_00021127-exon-sc0000378-1575043694:77188..77325 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1575043694:76789..76947 | TCONS_00021127-exon-sc0000378-1575043694:76789..76947 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1575043694:75592..75750 | TCONS_00021127-exon-sc0000378-1575043694:75592..75750 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1575043694:73752..75160 | TCONS_00021127-exon-sc0000378-1575043694:73752..75160 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1510915933:78728..79188 | TCONS_00021127-exon-sc0000378-1510915933:78728..79188 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1510915933:78267..78556 | TCONS_00021127-exon-sc0000378-1510915933:78267..78556 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1510915933:77857..77941 | TCONS_00021127-exon-sc0000378-1510915933:77857..77941 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1510915933:77188..77325 | TCONS_00021127-exon-sc0000378-1510915933:77188..77325 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1510915933:76789..76947 | TCONS_00021127-exon-sc0000378-1510915933:76789..76947 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1510915933:75592..75750 | TCONS_00021127-exon-sc0000378-1510915933:75592..75750 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1510915933:73752..75160 | TCONS_00021127-exon-sc0000378-1510915933:73752..75160 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1491911889:78728..79188 | TCONS_00021127-exon-sc0000378-1491911889:78728..79188 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1491911889:78267..78556 | TCONS_00021127-exon-sc0000378-1491911889:78267..78556 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1491911889:77857..77941 | TCONS_00021127-exon-sc0000378-1491911889:77857..77941 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1491911889:77188..77325 | TCONS_00021127-exon-sc0000378-1491911889:77188..77325 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1491911889:76789..76947 | TCONS_00021127-exon-sc0000378-1491911889:76789..76947 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1491911889:75592..75750 | TCONS_00021127-exon-sc0000378-1491911889:75592..75750 | Clytia hemisphaerica | exon |
| TCONS_00021127-exon-sc0000378-1491911889:73752..75160 | TCONS_00021127-exon-sc0000378-1491911889:73752..75160 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000378 | supercontig | sc0000378:73752..79188 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008654 | phospholipid biosynthetic process |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016780 | phosphotransferase activity, for other substituted phosphate groups |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008654 |
phospholipid biosynthetic process |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0016780 |
phosphotransferase activity, for other substituted phosphate groups |
Blast
BLAST of TCONS_00021127 vs. Swiss-Prot (Human)
Match: CEPT1 (Choline/ethanolaminephosphotransferase 1 OS=Homo sapiens GN=CEPT1 PE=1 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.349e-101 Identity = 169/379 (44.59%), Postives = 240/379 (63.32%), Query Frame = 3
Query: 246 LTDSQLKRLKDHKYCSEGKSALEVFFQPFWNYVVSKMPLWVAPNLITISGLIINVLTSALILLYSPKADSDEVPGFVFILCAIGLFLYQTLDAIDGKQARRTNTSTPMGELFDHGCDAVSTLFLSTSIACALSLGTYPRYLFFFFINNVAIFYLAHWQTYCFGKLMFGLIDVTEAQVQAMAIYVFAGIYGPQFFRQEVMVLQFRMPLAKLLVYVCAFTAVVYTLTT-FRKIFKGGAGKNGTTVATTSVLTPVVPIGIVIACAFYVYKHSTDNLFHTSPVLIMMMFGFSTAKITCNLVIASMSKSPLDMLDSTMLGPISLACFNYFSVQSLLSYVALDSVITEYVFLIALFVYSVLNFVVFSVQVCQEISENFGIAVFTI 1379
L+ QLKRL++H+Y S G+S LE Q +W ++V ++P W+APNLITI GL IN+ T+ L++ Y P A +++ P + +I CA GLF+YQ+LDAIDGKQARRTN+S+P+GELFDHGCD++ST+F+ A+ LGT P ++FF +FY AHWQTY G L FG+IDVTE Q+ + +++ A I GP F++ + VL +M K+ +C +++ T FR IF GG GKNG+T+A TSVL+P + IG VI A +YK S LF P L ++ FGF +AKIT LV+A M+KS + + D+ +GP L YF +S I EY+ L V+S + + + V VC +I+ + I VF I
Sbjct: 43 LSRHQLKRLEEHRYQSAGRSLLEPLMQGYWEWLVRRVPSWIAPNLITIIGLSINICTTILLVFYCPTA-TEQAPLWAYIACACGLFIYQSLDAIDGKQARRTNSSSPLGELFDHGCDSLSTVFVVLGTCIAVQLGTNPDWMFFCCFAGTFMFYCAHWQTYVSGTLRFGIIDVTEVQIFIIIMHLLAVIGGPPFWQSMIPVLNIQM---KIFPALCTVAGTIFSCTNYFRVIFTGGVGKNGSTIAGTSVLSPFLHIGSVITLAAMIYKKSAVQLFEKHPCLYILTFGFVSAKITNKLVVAHMTKSEMHLHDTAFIGPALLFLDQYF-----------NSFIDEYIVLWIALVFSFFDLIRYCVSVCNQIASHLHIHVFRI 406
The following BLAST results are available for this feature:
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