TCONS_00021133 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021133
Unique NameTCONS_00021133
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021133 ID=TCONS_00021133|Name=TCONS_00021133|organism=Clytia hemisphaerica|type=transcript|length=144bp
CATAGATTGTGATCTAAAGAAACTTCCACTGCGAGGAAAAGATGGTGCAA
GGGTTGTAGACGCAAAATATCATGCACATAAATTACGTTGTGAAGAATCA
GAGACAGTGTTCTTAAAAAGggaGAAAGGTTTGGAAAAGCAGTG
Run BLAST on NCBI

transcript from alignment at sc0000378:179599..180136-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021133 ID=TCONS_00021133|Name=TCONS_00021133|organism=Clytia hemisphaerica|type=transcript|length=538bp|location=Sequence derived from alignment at sc0000378:179599..180136- (Clytia hemisphaerica)
CATAGATTGTGATCTAAAGAAACTTCCACTGCGAGGAAAAGATGGTGCAA
GGGTTGTAGACGCAAAATATCATGCACATAAATTACGTTGTGAAGAATCA
GAGACAGTGTTCTTAAAAAGGTACCTTTTTGAAAGTATATTGAATGTTGC
CCCTTTGGACCAAAATCGAAGGATAATAATGATGATGCATTGTTATCAAT
GGTTTTACGTTTATTTAAATTTGATTAATGAAAAGAAAAAAATATTACAA
CTACTGAAAACTCTGGAAAACTCCCTACCGTTTCTGGAGAACCATACTAA
AGTTCTGTGTTCAATTTGAATGTTTATTCTATTGAACAACAAATAAGATG
ATCTTTTGGTATTTACAAACTTTTCTTTAAAGCCAAAGTTTCCCCTGATC
AAGTTTGTCTTTGAAAATGTTTTCCTTGATTTAGAGTTTTATTTTATTAT
AATTTTCTTTGATTTGAAACTAAAATGTGCTTATGAATGATTCTTCTAAA
ATTTTTCTTTTTAGGGAGAAAGGTTTGGAAAAGCAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011837XLOC_011837Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021133-exon-sc0000378-1575043694:180017..180136TCONS_00021133-exon-sc0000378-1575043694:180017..180136Clytia hemisphaericaexon
TCONS_00021133-exon-sc0000378-1575043694:179599..179622TCONS_00021133-exon-sc0000378-1575043694:179599..179622Clytia hemisphaericaexon
TCONS_00021133-exon-sc0000378-1510915933:180017..180136TCONS_00021133-exon-sc0000378-1510915933:180017..180136Clytia hemisphaericaexon
TCONS_00021133-exon-sc0000378-1510915933:179599..179622TCONS_00021133-exon-sc0000378-1510915933:179599..179622Clytia hemisphaericaexon
TCONS_00021133-exon-sc0000378-1491911889:180017..180136TCONS_00021133-exon-sc0000378-1491911889:180017..180136Clytia hemisphaericaexon
TCONS_00021133-exon-sc0000378-1491911889:179599..179622TCONS_00021133-exon-sc0000378-1491911889:179599..179622Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000378supercontigsc0000378:179599..180136 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021133 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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