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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021138 ID=TCONS_00021138|Name=TCONS_00021138|organism=Clytia hemisphaerica|type=transcript|length=368bp
GGAAAACAACCATTACTTTTACGTGAAAAACGGATTGAAAGTAACCGGCA
TCTCGTGGCATGGGGAGGACATACGGTGATTAGAAGTGTTTGGTATGGTG
ATAAAAAGCAACTTTTCATTGTTACGCCCGTACCAGTTCCGATCGTTGAT
GACATGTGTGACATTACTTGGTATGCTGAATCGCAAACACAAGCTACCAC
TTATGTTTATTTTGGTCCTAACAAATATGCACCTAATGTCCACGAACGTT
TGTATTCCGAAGTTCACAGTTTGCTATATACAAGATGGAGGATGCAAGCT
GTCGATACGTCGATAAGAATTCAATTTGATGGACAACCACGAAATATAAT
CTACCTGCCAGTTTATCA Run BLAST on NCBI transcript from alignment at sc0000378:260957..262762- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021138 ID=TCONS_00021138|Name=TCONS_00021138|organism=Clytia hemisphaerica|type=transcript|length=1806bp|location=Sequence derived from alignment at sc0000378:260957..262762- (Clytia hemisphaerica)
GGAAAACAACCATTACTTTTACGTGAAAAACGGATTGAAAGTAACCGGCA
TCTCGTGGCATGGGGAGGACATACGGTGATTAGAAGTGTTTGGTATGGTG
ATAAAAAGCAACTTTTCATTGTTACGCCCGTACCAGTTCCGATCGTTGAT
GACATGTGTGACGTAAGTAGCTCTTACAACGACAGGGACAGTTTTAAAAT
CAGTGTTTTTCCGTTTGTAATTGTGCCTAAAATTCGATCAATTGCGATAG
TCGGGTTCGATTTCCCAATCTTTCCGAATACTTACTAGGATGTACTCTTT
TATATTAAATATATTAAGAAAGACTGACCCATGACAATTACCGGAGTTTG
CAGCCGGCCGTCATTACGGCTGTTTCATTTTTTTTCATTTTCTTTTTTTT
TCATTTGCTTCAAATTTCAAGTGTCTTTTTTATTACTATTATTCTTATTG
TTATTATAGAAGTATATTTCTCAGATCTATTGACCTTAAATTTACAGTTT
ATCTTTATAATGTAACAAAGTTCTAGGCACAAGGGCCTCTGGAACTGGTC
GTGATTATTCTTGTTGTACAAGTACTTTTTTCATATAAAGTCGAGTTCTT
GGGCTTCCACGGACTTTCCACTGGAAGTTATTGCCGTGTGGAAACCATGT
TAGTGTAGTTGGAGTAATTCCTTTTGAAAGTATAGCCATGGTATTGCAAA
AATAGTGCATTCTTAAAGCGAAATGTATTTTAGATCTTGTCTGATTGTAG
ATTAGTACTTTGCTTTTTAGTAATTCTGATGACGCTAAAAGTAGGCTAAA
ACTATTCTAAAAACAAATAAAATCTGGCGATAAGATATTTAAATTCTCAT
TTTAGAAAACTGTGATTTTCTTTGCGAAAACCTGAATCTCCAAAAATTTC
ATTTGAGTTAAAAATATTAAATATAATTCTGTTTTTCAGAAATCATTATT
TTAATTCTAACACACATTTATCTTTCAGATTACTTGGTATGCTGAATCGC
AAACACAAGCTACCACTTATGTTTATTTTGGTCCTAACAAATATGCACCT
AATGTCCACGAACGTTTGTATTCCGAAGTTCACAGTTTGCTATATACAAG
ATGGAGGATGCAAGCTGTCGGTATGTTATTTTCATCAAAGAGTTCCCTTT
ATTGGAAGTCCAATGCACGGATAGACCTGATGGGAGACTCAAAAATAAGC
GAAAGAAGTTTGCCTTATCCTTTGTGTAGAAATCTCAGGAGCCCAAGTGC
AAAATCTTTCTGTTCTTTTGTCTCTAAAAGATACGTTTCTTACATCCTGA
TAAGATCCAATTGGATTTAACTATATACAACCCCAGGGATATTTCTAAGC
ACTTTTTTATGTCCATATACTGGCAAAAATACTCAATCTAAGATTTCAGG
TATTCAGGTATTATTAGAAATTCAATCTAAATTTACAAAAACGGCCCCAG
CTCAAAGTGCTTAGAAAAATTCCTGCAACCCCCATTAAATTCTCTTATAA
ATTTTTGGACCTACCCCGGTGGAGGTCCTAGAAATTAACCTTTGTTCGTT
CCTTCGTTCCTTCGTTCCTTCGTTCCTTCGTTCCTTCGTTCGTTCGTTCC
TTCGTTCCTTCGTTCCTTCGTTCCTTCGTTCCTTCGTTCGTTCCTTCGTT
CCTTCGTTCCTTCGTTCCTTCGTTCCTTCGTTCCTTCGTTCGTTACTAGC
TTTTTTTTAAACCTTATTTATATGATTTTAATTGAAACAAAGATACGTCG
ATAAGAATTCAATTTGATGGACAACCACGAAATATAATCTACCTGCCAGT
TTATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021138-exon-sc0000378-1575043694:262601..262762 | TCONS_00021138-exon-sc0000378-1575043694:262601..262762 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1575043694:261643..261784 | TCONS_00021138-exon-sc0000378-1575043694:261643..261784 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1575043694:260957..261020 | TCONS_00021138-exon-sc0000378-1575043694:260957..261020 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1510915933:262601..262762 | TCONS_00021138-exon-sc0000378-1510915933:262601..262762 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1510915933:261643..261784 | TCONS_00021138-exon-sc0000378-1510915933:261643..261784 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1510915933:260957..261020 | TCONS_00021138-exon-sc0000378-1510915933:260957..261020 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1491911889:262601..262762 | TCONS_00021138-exon-sc0000378-1491911889:262601..262762 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1491911889:261643..261784 | TCONS_00021138-exon-sc0000378-1491911889:261643..261784 | Clytia hemisphaerica | exon |
| TCONS_00021138-exon-sc0000378-1491911889:260957..261020 | TCONS_00021138-exon-sc0000378-1491911889:260957..261020 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000378 | supercontig | sc0000378:260957..262762 - |
Blast
The following BLAST results are available for this feature:
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