TCONS_00021147 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021147
Unique NameTCONS_00021147
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021147 ID=TCONS_00021147|Name=TCONS_00021147|organism=Clytia hemisphaerica|type=transcript|length=158bp
NNTCCCAATCAATGTCATCAGCAAAATAATTCAGTGTGTTGAATTTTGTG
CGTGGCTCTTGTTGATCGTCGTCCAGAAAGGAGTTTTGAACTTTCAGAGT
TGTTGATACAAGTACAATTTCGTGATGTGATGTGCTTTGCAATACAGGTA
CTGTTGTG
Run BLAST on NCBI

transcript from alignment at sc0000378:86892..87049

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021147 ID=TCONS_00021147|Name=TCONS_00021147|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at sc0000378:86892..87049 (Clytia hemisphaerica)
CACAACAGTACCTGTATTGCAAAGCACATCACATCACGAAATTGTACTTG
TATCAACAACTCTGAAAGTTCAAAACTCCTTTCTGGACGACGATCAACAA
GAGCCACGCACAAAATTCAACACACTGAATTATTTTGCTGATGACATTGA
TTGGGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011847XLOC_011847Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021147-exon-sc0000378-1491911889:86892..87049TCONS_00021147-exon-sc0000378-1491911889:86892..87049Clytia hemisphaericaexon
TCONS_00021147-exon-sc0000378-1510915933:86892..87049TCONS_00021147-exon-sc0000378-1510915933:86892..87049Clytia hemisphaericaexon
TCONS_00021147-exon-sc0000378-1575043694:86892..87049TCONS_00021147-exon-sc0000378-1575043694:86892..87049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000378supercontigsc0000378:86892..87049 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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