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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021153 ID=TCONS_00021153|Name=TCONS_00021153|organism=Clytia hemisphaerica|type=transcript|length=1078bp
GTTTCGAGACTTCGGTTTCGAGACATCTTCACAATGTTGACACACAGTAT
TCTCATACTATTCTTATCATCTATCGTCATTGGCGTCGGTATCGTTGGTA
TTACCGTTTTAGTGAAAAGCAGAGAAAGCAGCAAATTCAACAGAGatcaa
atcattatactgacgCTATTCATTTTTCACACATTATTCGCAATAATCCA
AATTCCAGTCACAAGCCTTCGATGTTTCTCGGAAAACTCACTGTTTTCTT
ATCTGGAACCATTTAGATCATATATTGCATCTATACAAGTCATTTGTACA
ATAAGCCTATCGATTGAACGTTATTTGACAGTTTTTGCCCCTTTTTGGTA
CGAAAGGCAGAAAATTAAATTCACTCCTGCATATCTCTACTTTAGCTTTG
CCAACAAGGCTTTATGGATCGGTTTATCTGTGAAATACCCCGATATTCTG
AAAGTAACAGCTATAACTATTTTTATCGGCTCCATTATTATTGCTTTAGT
TAATTTCAAGATTTACCGAATTATTTCAGGACATTTGTGTAAAATTGCAG
CAACCACCGTCCCAAGGGACCAAATAGATAAAAAGAAAGATGAGCTTGCA
TTAAAGAAGAAAGAATCAAAAGCCTTTATCGTTaatctttcgattgtttt
gaCGTACATTGTAACTTGGATTCCATACCAAATCCTAACTTTTATCATGG
AAGACAAAGAAAGAGAGCGCAATCTCCATTTTCTAAATGCTGAAATTGTT
GTACTGTTCAACCCTTTAATGGATATTCCAGTTTATATTTTAGTATCAAA
GAATCGAAgacaaattttggtcaatttgtttCGATTCAAATAATACCAAT
TCAAAATCTTATTAGACATTGTATACAATTAATATAAGCGCGTAATTTAA
ACTCTTTTTCATCTGAATATTCTAACATTTACTGGCGGTACATTGTATAT
ATacttacagttgacgctctctaattcgacgttctactattcgatacgct
ccattatttgataatattgaaagtcaccgtcaacaaaaaACCCTGATAAA
CGTTGCTCTACTATTTGatacactccct Run BLAST on NCBI protein sequence of TCONS_00021153-protein >TCONS_00021153-protein ID=TCONS_00021153-protein|Name=TCONS_00021153-protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp
VSRLRFRDIFTMLTHSILILFLSSIVIGVGIVGITVLVKSRESSKFNRDQ
IIILTLFIFHTLFAIIQIPVTSLRCFSENSLFSYLEPFRSYIASIQVICT
ISLSIERYLTVFAPFWYERQKIKFTPAYLYFSFANKALWIGLSVKYPDIL
KVTAITIFIGSIIIALVNFKIYRIISGHLCKIAATTVPRDQIDKKKDELA
LKKKESKAFIVNLSIVLTYIVTWIPYQILTFIMEDKERERNLHFLNAEIV
VLFNPLMDIPVYILVSKNRRQILVNLFRFK Run BLAST on NCBI transcript from alignment at sc0000378:226091..227168 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021153 ID=TCONS_00021153|Name=TCONS_00021153|organism=Clytia hemisphaerica|type=transcript|length=1078bp|location=Sequence derived from alignment at sc0000378:226091..227168 (Clytia hemisphaerica)
agggagtgtatCAAATAGTAGAGCAACGTTTATCAGGGTtttttgttgac
ggtgactttcaatattatcaaataatggagcgtatcgaatagtagaacgt
cgaattagagagcgtcaactgtaagtATATATACAATGTACCGCCAGTAA
ATGTTAGAATATTCAGATGAAAAAGAGTTTAAATTACGCGCTTATATTAA
TTGTATACAATGTCTAATAAGATTTTGAATTGGTATTATTTGAATCGaaa
caaattgaccaaaatttgtcTTCGATTCTTTGATACTAAAATATAAACTG
GAATATCCATTAAAGGGTTGAACAGTACAACAATTTCAGCATTTAGAAAA
TGGAGATTGCGCTCTCTTTCTTTGTCTTCCATGATAAAAGTTAGGATTTG
GTATGGAATCCAAGTTACAATGTACGtcaaaacaatcgaaagattAACGA
TAAAGGCTTTTGATTCTTTCTTCTTTAATGCAAGCTCATCTTTCTTTTTA
TCTATTTGGTCCCTTGGGACGGTGGTTGCTGCAATTTTACACAAATGTCC
TGAAATAATTCGGTAAATCTTGAAATTAACTAAAGCAATAATAATGGAGC
CGATAAAAATAGTTATAGCTGTTACTTTCAGAATATCGGGGTATTTCACA
GATAAACCGATCCATAAAGCCTTGTTGGCAAAGCTAAAGTAGAGATATGC
AGGAGTGAATTTAATTTTCTGCCTTTCGTACCAAAAAGGGGCAAAAACTG
TCAAATAACGTTCAATCGATAGGCTTATTGTACAAATGACTTGTATAGAT
GCAATATATGATCTAAATGGTTCCAGATAAGAAAACAGTGAGTTTTCCGA
GAAACATCGAAGGCTTGTGACTGGAATTTGGATTATTGCGAATAATGTGT
GAAAAATGAATAGcgtcagtataatgatttgatCTCTGTTGAATTTGCTG
CTTTCTCTGCTTTTCACTAAAACGGTAATACCAACGATACCGACGCCAAT
GACGATAGATGATAAGAATAGTATGAGAATACTGTGTGTCAACATTGTGA
AGATGTCTCGAAACCGAAGTCTCGAAAC Coding sequence (CDS) from alignment at sc0000378:226091..227168 >TCONS_00021153 ID=TCONS_00021153|Name=TCONS_00021153|organism=Clytia hemisphaerica|type=CDS|length=843bp|location=Sequence derived from alignment at sc0000378:226091..227168 (Clytia hemisphaerica)
TTATTTGAATCGaaacaaattgaccaaaatttgtcTTCGATTCTTTGATA
CTAAAATATAAACTGGAATATCCATTAAAGGGTTGAACAGTACAACAATT
TCAGCATTTAGAAAATGGAGATTGCGCTCTCTTTCTTTGTCTTCCATGAT
AAAAGTTAGGATTTGGTATGGAATCCAAGTTACAATGTACGtcaaaacaa
tcgaaagattAACGATAAAGGCTTTTGATTCTTTCTTCTTTAATGCAAGC
TCATCTTTCTTTTTATCTATTTGGTCCCTTGGGACGGTGGTTGCTGCAAT
TTTACACAAATGTCCTGAAATAATTCGGTAAATCTTGAAATTAACTAAAG
CAATAATAATGGAGCCGATAAAAATAGTTATAGCTGTTACTTTCAGAATA
TCGGGGTATTTCACAGATAAACCGATCCATAAAGCCTTGTTGGCAAAGCT
AAAGTAGAGATATGCAGGAGTGAATTTAATTTTCTGCCTTTCGTACCAAA
AAGGGGCAAAAACTGTCAAATAACGTTCAATCGATAGGCTTATTGTACAA
ATGACTTGTATAGATGCAATATATGATCTAAATGGTTCCAGATAAGAAAA
CAGTGAGTTTTCCGAGAAACATCGAAGGCTTGTGACTGGAATTTGGATTA
TTGCGAATAATGTGTGAAAAATGAATAGcgtcagtataatgatttgatCT
CTGTTGAATTTGCTGCTTTCTCTGCTTTTCACTAAAACGGTAATACCAAC
GATACCGACGCCAATGACGATAGATGATAAGAATAGTATGAGAATACTGT
GTGTCAACATTGTGAAGATGTCTCGAAACCGAAGTCTCGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021153-exon-sc0000378-1491911889:226091..227168 | TCONS_00021153-exon-sc0000378-1491911889:226091..227168 | Clytia hemisphaerica | exon |
| TCONS_00021153-exon-sc0000378-1510915933:226091..227168 | TCONS_00021153-exon-sc0000378-1510915933:226091..227168 | Clytia hemisphaerica | exon |
| TCONS_00021153-exon-sc0000378-1575043694:226091..227168 | TCONS_00021153-exon-sc0000378-1575043694:226091..227168 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000378 | supercontig | sc0000378:226091..227168 . |
Blast
The following BLAST results are available for this feature:
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