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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021166 ID=TCONS_00021166|Name=TCONS_00021166|organism=Clytia hemisphaerica|type=transcript|length=1526bp
GTTCGGTTTAGTTCAGTTTGGTAGCGTCTGTTTTGAAAATTAGCAACATC
AGAAAGATATCAAAAACAATTATTGACGAACAGATTTGTAACTGCGCTTC
AAGTTCACGCGTTAGACGGCTATGGATTTTGCTTTCTACTCGCAGGCCAC
GGGGAGTGTACCTGATTTGAGCCATGCGAATTATCAAGTGAGTAACGAAA
CAACCCAACAGACATGCGCAAGTTTCACCACGAGTGAAGATGAAGAGCTC
TTCAAAATCAATAATGGCGGCGGAGCAGTCAAAATGGAATTAAGATATGC
CATCGAGGCAAAACGAGCAGGAAAAGGACTTGATATGCCAATTCTCGAAC
AAATGCATCGATTACCAAAACAGTTAACGATAGAAGAAGAGGAAAGACGC
CGGGTGCGCCGTGAACGTAATAAAGTCGCCGCATCACGTTGTCGCGtcaa
aagaaaatgtcacgtcAGAAGACTGTTGAAGGAATCAGACGACCTGACGA
AATCGAACAACAGTCTACAAAACGAAATCAATAAACTGGAATATGAGAAA
CAAAAACTAGAAGGAGCAATCAAAAACCATGCGTGTAAAATGTCCAACAA
TGCTTTTTTGGAGGTCCATGGTACCACAAAGGATCGGTTATGCCGTTATG
GTAACTAGATAGCATTTTCTAGCATTTAGGATTTATTCTCAAATCAAATC
TCACGAGTTTTTAAATTATAACAATTTaactctttcattttttttatgaa
atccaAACTGAGTTGACCACTCACTGTCGTACTTTGTTCAAAATTAATTG
AAGTATTTTCGATAATAGCTACTGAAAAGGAATCTACATCAATTCAAAGG
ACTAAATTAAAAAGTATACCTTGTATTTTGACATTCGAATAAACAGCTGT
AATAATTTTAATCAAGATATAGTTTtacttataatttttttattacttga
attttttaattttttaatttctttttatattttactgACATTTTGTAAAC
CTAGATAACGAAACTGTCTGTCAGTCAGCTTACAATGTTTTTTCATCGGC
TACAATGTAACATTGAAGGAAACTTGAATGACGACAAAATTTCGGtcatt
gacaaactttttttcatatttactgAAACTTGACATGACTGACGACAAAA
CTGTTTTACATTGACTGAAACTTGACTTGACTGACGACAAAACTCTTTTA
CTTTTGACTGAAACTTGACTTGATTGACGACAAAACTGTTTTACATTGAC
TGAAACTTGACTTGACTGACGACAAAACTCTTTTACTTTTGACTGAAACT
TGACTTTATTGACGAAAAAACTATTTGACATTGACTGAAACTTGACTTGA
CTGACGACAAAACTGCTTTACTTTGACTGAAACCTGACTTGACTGAcgac
aaaattattttactttgACTGAAGTTTGACTTGACTGACGACAAAACTCT
TTTACTTAAACTGAAAGCTTGACTTGACTGACGACAAAACTCTTTTACTT
AAACTGAAAGCTTGACTTGACTGACG Run BLAST on NCBI protein sequence of TCONS_00021166-protein >TCONS_00021166-protein ID=TCONS_00021166-protein|Name=TCONS_00021166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=178bp
MDFAFYSQATGSVPDLSHANYQVSNETTQQTCASFTTSEDEELFKINNGG
GAVKMELRYAIEAKRAGKGLDMPILEQMHRLPKQLTIEEEERRRVRRERN
KVAASRCRVKRKCHVRRLLKESDDLTKSNNSLQNEINKLEYEKQKLEGAI
KNHACKMSNNAFLEVHGTTKDRLCRYGN Run BLAST on NCBI transcript from alignment at sc0000379:246828..257831+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021166 ID=TCONS_00021166|Name=TCONS_00021166|organism=Clytia hemisphaerica|type=transcript|length=11004bp|location=Sequence derived from alignment at sc0000379:246828..257831+ (Clytia hemisphaerica)
GTTCGGTTTAGTTCAGTTTGGTAGCGTCTGTTTTGAAAATTAGCAACATC
AGAAAGATATCAAAAACAATTATTGACGAACAGATTTGTAACTGCGCTTC
AAGTTCACGCGTTAGACGGCTATGGATTTTGCTTTCTACTCGCAGGTGAG
ATTCTAAGTGTGTTTGAAGTGCAGTGTCTGATAATTCGTTTGTACGTTTA
ATCAAAATTTGTAGAAGAATAATATCAGAAAAGCggcaaaatttatttta
atattttcgctgaatcagcaaatttccaataaatatataatagccgcatt
ttgtttgtttctgaAAATGCATTCAACCGTATCAGGTTACTCACATTGAG
TTTAATTGCGTAATAATATAACCAATGAGATTAGATCTTTTCCACCATTT
GAAGAAACATtcgaaacaaacaaaacaaaaacgttcgaaaaccaattaaa
ttttcggtttttaaaCACCGGAACCAGTTGTTTAGTTTACTGGGCTGCAA
GACGCACCTTGGAGCCGGAGAAGCTTATTTGTCTGCAAGTATACCCAATT
TTTGGTGGGTACAAACCGGNATTACTGGGCGACAAGACGCACCTTGAAGT
TATATTGCCTGGAGCCGGGGAAGCTTATTTGTCTCCAAGTATACCTAGTT
TTTGGGTACAAACCGGACAACAAGTTTTAAACATATTCTTGGAAATTAGA
GAAAGGGCATTGCTTAACTGTTAGGCTTTTCttagttttttcttttgaag
cTGAAGGTTAGAATACAGGAATATTATTGAGTATAAAATAACATGACAAA
ATTAacaataaatttacaaaaaaatggaaattgtATTGTTGGCAATTTTG
GCTGCAATTCGAAAGGAAAATTGAGTTCAGGTAGGTGGTCCATTTATTTT
ATTATCTGCGTATGTATTACAAACATCTGATTGAATGCTTTTTTACCACC
GATATTGAACATGAACCATGGGGTTCAGggcacagatatctaagcccgaa
gggctagatttgcaactttaagctttctccagcaaaaaaaagtgaagcaa
aaatttgactttttaaatttcgtgccgNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nagtcacgtgactctggtaggaaatccttccaaagatgagcttcactttt
tgataaaagccgcaaatctagcccttcgggctttacagatatctgtggtt
cagggggtcggtactaaaatcttaGACATATTAGAGTACTAAAAGGGTTT
TCGAGAACCTTTTGCATACAATCACCCCATTGTAGAGATATTTCAGTACC
CATGTACTAAAGTTTTTGGGAACACAGTGACCACCCAAATTTGGTCTTCA
GGactatttttctcaaaagtgcTGATTTTTGCCACCCTGGAACCCAGGGC
TTATCTGACCCTCTTACGCTATTGATAAACTGATGGACGCATTGACACTG
GCACTGACCTTTTTACGTCGCAGAATTGTTTAACGGCCCTGGCTCCGCAA
GGGTGGggtattttttttcctttttttggctggaaacTGCTAATTAAAGG
GCGCCGGAAATAATAAGAGGAACCTTTTTGTGTTCCTtgtcttttggcgc
ccctctaaAAAAATGGTATAATGGCACGTTATACCACCACCGACATCGCA
GTTTTGCACGGATTATTAACTACTCCAGTCTAGTCATATAACTTCTATCC
AGTATATGAACTCAAAAGCTTCAAATTCACTAACTAATGGTGAGTCAATG
ATAATTTAAAGAGAGCTTCGAGAAAAATAAACTTCCGGATCAATGTTTAA
GtcgaaaaataaacattttgaaacaaaCGCGAAAAGACTTTGTGACTATG
AAATCGCAGCGGAcagaacgttgtttcaacattcatttGATTTTGTATTT
ACAGTAAGCGTTTTATGGTGGTTATAGacgtcgttttttataagaacgtc
aataTTTTTCGAAGCCTTTTTTTATGttcataactttttgaattttaagc
caaaaaatgttcttagaatgttttATCACTAATTGTTGAGTATTTTGTGT
AATTTCTTTAGGAAATTGGGTGTGTTAGATAAAAATGTGTCTGAATGATC
AAATCCTTGGAATGatgtttaaactttttttatcacctacagtacacgtc
ttttttttataaggaacacgtttataaggaacttgaggctgaaaatggtc
cgaaaaataaggaattgttaaggaactccaggctcggagccaagttaagg
ttccttacaaaaaaaacgtgtatctttgaaaaataaaccttgGAGACTTT
TGACTTTAACGCTTTGATTAACAGCgggaataaatattttcataatctCA
ATCCGATTCTATTATTTTTCGCAGTGTAAGAGTGCCCCTTATAAACTTAG
GTTTTGAGCATGGCATTTTATCGTtagaaacattttcaaaagacTCTTTG
AACTTTAAAGGATCCTGCCTTAAGTATCAACAATTGAATTAACAATGTTa
gtaaattttatgaaattttaactGTGCATGCTTTACACCgtgttaaaaat
atatatagctCGACCAATCTTTAATGAGACAATAACTATTAATCTTTCCG
TGGATAAGcttcttaaaaacaaaaattgctaCTGAATTAAAATCTCACAA
AANCTGCATAACTATTAATCTTTCCGTGTATAAggttcttaaaaataaaa
attgctaCTGAATTAAAATCTCACAAAATTCTTGACCCCTTGTCATTTAA
GTAAATGGATTTCAAGGAGGGGAAAGAGATGACGcggttttgtttgtttt
tacaCACTTAATGATCACACATCATTACATTTCAAAACTTAAGTCATTTT
GTACTTAAAGACTCTACGATGGAGGATGAAAATCTGGATTTCCCGAGCTa
ggcagtagcgtagacaggaggggcgcaaaatttgtgtagataagcagatt
tttatgacactttaATTATCTATTTAtacaataaaaatataattactgtg
tcataaaaatctactctcctacacaaattttgcgccccctcCTTGTCGAC
GCTACTGCTAGGATAGAATATAGGTAGATTTACGGAGCTTTAAAGACATC
GAGCCGGAACCTCGTTTCCAAGCTAActatacccgggggggggggtactt
aggcaaaaattgatgatgggtatgtgcggacggtaagggtcggtcttttc
acctttcaaagtctctctaagggtcggaaaaatcagaaagttttaaatta
gtctctctaagggtcggaaaattcaggatttttaggaaattttttgattt
tcagagaaaaaattgtataaagtctctctaagagtatgacttttttcaaa
aatcaaaaaaaaaattgtaataaagtcttaagtgtatgacttttttcaaa
aatcgaaaaaaaaaattcaaagagtctctctaagggtcaccttttcagca
aaaatcagtctctctaagggtcggttttcggaggtcccgtccgcacatac
ccctcattcgccaaccctagtaccccccccccgggtaactATATCTCGGA
TACACAGAAACATGGTAACTCACACCTTATCTCCACGCTAAGATTTTTGG
ACAAGGAACTTCGCAACAACAGcctttttcacgaaatttaCAAAAAACTG
GAATTTTCAAATTAGAAAGAAAACCTCCACACGAATATTATTGGAATGGT
ATTCTCAAAGAAATATAAAATCCTTTTTATTGAGTAAAATAAATCGTGAT
GAAACTGTCAAATCATTTTCTAGgtgaaattcataaaattttacGATTAA
TCCGATTGAAAGTAACAAACTCCATCGTGGAGATCAAATTTACAGACAGT
ATCGAATATCGATGATATAAGTAGAGCAGCCGGAAATATTCATTTGATTT
TCTCAACAACTCGCCGTTTTTTGAAGTGttttttatttcgattcaataca
gcacctgaccccaaGAATGTAgcaaaccccgagaatgtaggtttctcatt
ttttagcgttgtagccctaacgatagttcaacttcataaaaagttgtatC
AGAGCCTGCTGTTACATATTACTTANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNcctacattctgggggttataacgaaaatgggagtcaa
cttcaaggaccaaaaaaattagcctatctatcaaaagtaatgaaactaac
ccctgggaaagaaTTTTGgaggttcaaaatttcattgaaaacattcattg
tttttaaaaattcaaatctacatctttcaggcctgattcaaatttcacct
acattctcggggtcaggtgctgtacaaGAAATGAAATTGTATACAATGTC
ATTAGATTAGTTTTTCTTGAAGGGTTCGTGTGTGTTAGATTTCAGAATTT
CATAACGTGAAGGATTTCGATTGAATTTCAAGTTGTCCTTATTATTACGC
ACATGGTCTTGTTGAGAAACTGataaattttggttttaaagaCTACTTTC
ATGGGCACAAAATAAGGTAAGAACTTAAGAAGACATTCAAAGTGTGAAGG
GTATCAAAAGCAGCTTTAAATTTAGTTGAggctttgaaaattgaaaactg
gCTCAGGACTGCCAGTGCTAGCTGACGGTTTTGAACCAAATTTCCAGGTT
TCATGGTCGCTGATTAAAATCTAACGATatttctggaattttttgcaTCA
AAACTAACCTAGTGAAACTCTtgcattataaaaattttcttaatttgggA
ATAAGTTTGTGTTGTTaatatttggcaaatttttaccTTTTGTGGACGTT
AAAGCCTTTCTGAGACAACAGTGTATACATAAAAGTTCAGACGTGGGAAG
ATTTAATGGccattttttacacttttccaAGGGAAGTTTTGTGTAGTTTA
TACTGGTTTATACACCATTAATCAAAACCTTATAGCTTTTGCACGAATCT
CTGATTTTTAGTGGGAAAAAATCTCCAGGTCTTGTCATTTTAGAGGTTAG
CTGGCTCATGACTGctttgttattttttcgaaagaaaatttctaaagTAA
CATTTATATATGTCTCAAAGTTgcttatacacgctttttttataagaata
gtgtactttggctgagggtgagtattattcttatttttctattgttctaa
acaataggcctattgttctaactctgaaatctcaccctgatattcttata
gaagttattttcattaaaaaagcgTGCAATTCACTGAATTCACCATCTGT
TTGTATATTTACTTAGGCCACGGGGAGTGTACCTGATTTGAGCCATGCGA
ATTATCAAGTGAGTAACGAAACAACCCAACAGACATGCGCAAGTTTCACC
ACGAGTGAAGATGAAGAGCTCTTCAAAATCAATAATGGCGGCGGAGCAGT
CAAAATGGAATTAAGATATGCCATCGAGGCAAAACGAGCAGGAAAAGGAC
TTGATATGCCAATTCTCGAACAAATGCATCGATTACCAAAACAGGTACTA
TATGTTTTCTTTAAAACAGAAATTTTATAGACGACGAAAAAGCAAGTGAA
AGAGTGGTTAAGTAGAATTTAGATTGGTAAGAAAGGAAATgcataaacgt
tttttatataagaacatccaacttttttgaagccttcagatgtgctttac
tttttgggtttcaagcccAAAAAACGTTCtttacatgttcttattttcag
cattttttgagtattttggttcattttcctaagaaaacaggtgttttaga
gtcaacaaagccttaaaatgttcttagcttgttcttaagattttggccac
cgaagccttatgttcttatatagtttgttctgataaaaaaaacgtgtaga
ttaTGAATCACGATTTTCCTTTTGATTTGGGCTGAATAAAAAATGCATCA
ATGAACTAGTTTCAAAACTTCTAACCGTTAATTCAATCAAATGGCACAAA
TTAATGATATTACTTCACCCTTAGTTATATCAATTTCTGTCGGTATTGAG
TGCCATTGTTCTTTTTGAAATCACGCGAAATTTTACAATTTCCGTCCTTT
AAAGTTGATATAATTTGATTGGTAGCGGAATGACATTGAAGCTACCGCGA
TATtaaatattcattttttgtgaaagaaatCATGTATTTTACACACTATT
TTAattaaagaacaattttttaagaacagttttTAAGAACATGAAGCTGA
TATTTGGCTTAAAAATAGATTCGACGTTTAAAACTCTAAGAAGAAATACA
ACTTTAGGCCATAAGGTCTTTAGGTTTTTAATCTAAGTTTAAGATTTTTG
ACAAAAGCGACCAAAGATGAGCCAGAATTTACTGAATTTTTGCTTACGtg
tgcactgatctttgttttgcttgccCTTTCCAACAAATGTTTCAATTCTA
GCATATGATATGAGCactacaatttttttaaaaatatattcaaaaaattt
aaaaaaatgaagatgaaaaaaatgaacttttgacCCTTTGATGCCAGAAA
CTTCAGTTTTGGTACAAAGGTACTTTAAAGCCTCTTTCCGGTGTAAAATA
ATCTTGAGTCATCTGGAATAAGATACCAGCTCAACTGGTTCTTTATCTTT
CACTAACAcgtttattcttattttcactactTTGTGAGCCATTTTGTCAA
TTTCCGAAGAAATCAAGTGAtttagagtctacaaagcctcagcttgttct
tgatatttcgTCCAtcaaaaccttatgttcttataaagtttgttcttatg
aaagaaAACGCTAATCAGATTAAACAATATGGCGAGCAAAATTAACATTG
ATTGGCTAAAAGATAACTATCAGAATCTTTGACATCAATCGAACACTATT
TTCTATCACAAGTAATAACTGAATGTTGGTTGGACGTCAAAACGACCAGT
TCTTCTCAAAACCTGAACTAACTGTACTTTGAAAAGATGTCAAATAAACG
ACCTATCTAATCCTATCAAAGGAAAGGCTTATCAGTGAAGCATCTTTAAT
GGACTCTTGTCAACTGTGAAGCTCTAATCTCTCACATCAAAAGAAAACTC
CGCAGTATCTCAGTAATAGGATAATGAAATCGGATTGTCAACCGCTCTCT
CAAAAGTTCCTTGTTCGCGTCCAAGGTGTGCATTCGACATTTTCCAAAGT
TAAGTATGGGATGATGAGATCCTCATTTTGatatagactagcaaactaat
ctgttaattaatcatgtcagagggcgggaacataaaggcggcgggcgttt
gctagaataggagctgcgtaggagagcgagcaaaagttggttagaggctg
ctgattaacagcccttgccgccgacaaattTTCTtactacgcttacctaa
ctcctacgctcacttttcccacgtgataccgttccagcccgactggcgtg
ccagtctaattttgatacttcattattttgaaattaattagCAAAACCTA
AAGGAAAACTAAAATATAGTTGCCTATTAAAGATAAGAGGTTAAAGGTTA
ATTGATGTCCGCCCGCTTAAGCAGCTTATTGTCATCGCCTGGACGCGAAC
AGAGGGATATTTTGAGAGCGGATCTTAAAGAATTCCGAAATAAGCCTCCT
ATTGTTTTTTCTGTAATCCGGTATTCTATTGTTAATTGAGCTTGTCATTA
AAAAGTCATTATAAAGTCATCGTGGGATACTTTTAATCAACTGCTTTTCT
TTTCGATTGAAATGAGTAAACCATTTCATTAGTCAAGAACATTTGGCGAT
GAAAGTGCTGTAGTTTGTTTTCTGGCAAAttattttaaacgaaaatatGT
TCCTTGTATATCAgttttggaaaatgaaaatgaaattcaaattttggaat
ATTTATTGTTATGCAGGGACTAGAGACaatggttgattttttattatgga
agtatttgacaaaaatatgtAGCAATGGTTTTTCACATTGTGAAATTCCA
CTCTGAGTAACTAAAATGTCTTCAAAGGTATGAAATAACAATAGAAGGGC
TTCTAAATAGATTGGGGTAAAGAATTTGAATATAATAAGCCTGTGCAGCT
GGGTATCTGAGTAGCAAATTATTTCTCAGAGAGGGGCTTCTTTTCTCTAT
TTCTTGGATGTACATTAATTCATGTGTGTATTACTATATTTCCCTTACAA
CCTCAGTTAACGATAGAAGAAGAGGAAAGACGCCGGGTGCGCCGTGAACG
TAATAAAGTCGCCGCATCACGTTGTCGCGtcaaaagaaaatgtcacgtcA
GAAGACTATTGAAGGTATTGTTTCTTTATCAAACTGTCAAAATTTGTGAC
TAGACCAAATTGACTATTTTATAAAAGATTAttcgagaaaaaccattttg
taggttttaaagGGGTACAGTAACTGAAAACtggtttctacaaaacatca
ctgctagcgaaaaaaagcatagacagcgtactttcaacacaaaatgtTTC
AGCCttaaacccgggggggggggggacNTCAGTTAACGATAGAAGAAGAG
GAAAGACGCCGGGTGCGCCGTGAACGTAATAAAGTCGCCGCATCACGTTG
TCGCGtcaaaagaaaatgtcacgtcAGAAGACTGTTGAAGGTATTGTTTC
TTTATCAAACTGTCAAAAGACCAAATTGACTATTTTATAAAAGATTAttc
gagaaaaaccattttgtaggtttaaAAGGGGTAACTGAAAACTGGTTTCT
ACAAAAATGTTTCGGCCTTAAATTCCCCCTGATTTTCAGAGAGAGGATAC
CTCTactttttgtaggttttaaggggtatccactggtaatgCCCTtatat
ttacatatttttagactttcagGAGTAAAAGTATTGTAAAGTCTTAACCT
AAAACGAGCATGAAAATTCATTCCAAGTTACCAGAAATGCCCAAAACAAA
TACTCTTTGTGtattcagaaaaaaagaaacttcaGTACTCAATAGTAAGA
CACAAACTAATCAAAGTGatgtcaaaaacaatttttgataactttcttCA
AAAAACCAGGAATCAGACGACCTGACGAAATCGAACAACAGTCTACAAAA
CGAAATCAATAAACTGGAATATGAGAAACAAAAACTAGAAGGAGCAATCA
AAAACCATGCGTGTAAAATGTCCAACAATGCTTTTTTGGAGGTCCATGGT
ACCACAAAGGATCGGTTATGCCGTTATGGTAACTAGATAGCATTTTCTAG
CATTTAGGATTTATTCTCAAATCAAATCTCACGAGTTTTTAAATTATAAC
AATTTaactctttcattttttttatgaaatccaAACTGAGTTGACCACTC
ACTGTCGTACTTTGTTCAAAATTAATTGAAGTATTTTCGATAATAGCTAC
TGAAAAGGAATCTACATCAATTCAAAGGACTAAATTAAAAAGTATACCTT
GTATTTTGACATTCGAATAAACAGCTGTAATAATTTTAATCAAGATATAG
TTTtacttataatttttttattacttgaattttttaattttttaatttct
ttttatattttactgACATTTTGTAAACCTAGATAACGAAACTGTCTGTC
AGTCAGCTTACAATGTTTTTTCATCGGCTACAATGTAACATTGAAGGAAA
CTTGAATGACGACAAAATTTCGGtcattgacaaactttttttcatattta
ctgAAACTTGACATGACTGACGACAAAACTGTTTTACATTGACTGAAACT
TGACTTGACTGACGACAAAACTCTTTTACTTTTGACTGAAACTTGACTTG
ATTGACGACAAAACTGTTTTACATTGACTGAAACTTGACTTGACTGACGA
CAAAACTCTTTTACTTTTGACTGAAACTTGACTTTATTGACGAAAAAACT
ATTTGACATTGACTGAAACTTGACTTGACTGACGACAAAACTGCTTTACT
TTGACTGAAACCTGACTTGACTGAcgacaaaattattttactttgACTGA
AGTTTGACTTGACTGACGACAAAACTCTTTTACTTAAACTGAAAGCTTGA
CTTGACTGACGACAAAACTCTTTTACTTAAACTGAAAGCTTGACTTGACT
GACG Coding sequence (CDS) from alignment at sc0000379:246828..257831+ >TCONS_00021166 ID=TCONS_00021166|Name=TCONS_00021166|organism=Clytia hemisphaerica|type=CDS|length=2685bp|location=Sequence derived from alignment at sc0000379:246828..257831+ (Clytia hemisphaerica)
ATGGATTTTGCTTTCTACTCGCAGGCCACGGGGAGTGTACCTGATTTGAG
CCATGCGAATTATCAAGTGAGTAACGAAACAACCCAACAGACATGCGCAA
GTTTCACCACGAGTGAAGATGAAGAGCTCTTCAAAATCAATAATGGCGGC
GGAGCAGTCAAAATGGAATTAAGATATGCCATCGAGGCAAAACGAGCAGG
AAAAGGACTTGATATGCCAATTCTCGAACAAATGCATCGATTACCAAAAC
AGTTAACGATAGAAGAAGAGGAAAGACGCCGGGTGCGCCGTGAACGTAAT
AAAGTCGCCGCATCACGTTGTCGCGtcaaaagaaaatgtcacgtcAGAAG
ACTGTTGAAGGAATCAGACGACCTGACGAAATCGAACAACAGTCTACAAA
ACGAAATCAATAAACTGGAATATGAGAAACAAAAACTAGAAGGAGCAATC
AAAAACCATGCGTGTAAAATGTCCAACAATGCTTTTTTGGAGGTCCATGG
TACCACAAAGGATCGGTTATGCCGTTATGGTAACTAGATGGATTTTGCTT
TCTACTCGCAGGCCACGGGGAGTGTACCTGATTTGAGCCATGCGAATTAT
CAAGTGAGTAACGAAACAACCCAACAGACATGCGCAAGTTTCACCACGAG
TGAAGATGAAGAGCTCTTCAAAATCAATAATGGCGGCGGAGCAGTCAAAA
TGGAATTAAGATATGCCATCGAGGCAAAACGAGCAGGAAAAGGACTTGAT
ATGCCAATTCTCGAACAAATGCATCGATTACCAAAACAGTTAACGATAGA
AGAAGAGGAAAGACGCCGGGTGCGCCGTGAACGTAATAAAGTCGCCGCAT
CACGTTGTCGCGtcaaaagaaaatgtcacgtcAGAAGACTGTTGAAGGAA
TCAGACGACCTGACGAAATCGAACAACAGTCTACAAAACGAAATCAATAA
ACTGGAATATGAGAAACAAAAACTAGAAGGAGCAATCAAAAACCATGCGT
GTAAAATGTCCAACAATGCTTTTTTGGAGGTCCATGGTACCACAAAGGAT
CGGTTATGCCGTTATGGTAACTAGATGGATTTTGCTTTCTACTCGCAGGC
CACGGGGAGTGTACCTGATTTGAGCCATGCGAATTATCAAGTGAGTAACG
AAACAACCCAACAGACATGCGCAAGTTTCACCACGAGTGAAGATGAAGAG
CTCTTCAAAATCAATAATGGCGGCGGAGCAGTCAAAATGGAATTAAGATA
TGCCATCGAGGCAAAACGAGCAGGAAAAGGACTTGATATGCCAATTCTCG
AACAAATGCATCGATTACCAAAACAGTTAACGATAGAAGAAGAGGAAAGA
CGCCGGGTGCGCCGTGAACGTAATAAAGTCGCCGCATCACGTTGTCGCGt
caaaagaaaatgtcacgtcAGAAGACTGTTGAAGGAATCAGACGACCTGA
CGAAATCGAACAACAGTCTACAAAACGAAATCAATAAACTGGAATATGAG
AAACAAAAACTAGAAGGAGCAATCAAAAACCATGCGTGTAAAATGTCCAA
CAATGCTTTTTTGGAGGTCCATGGTACCACAAAGGATCGGTTATGCCGTT
ATGGTAACTAGATGGATTTTGCTTTCTACTCGCAGGCCACGGGGAGTGTA
CCTGATTTGAGCCATGCGAATTATCAAGTGAGTAACGAAACAACCCAACA
GACATGCGCAAGTTTCACCACGAGTGAAGATGAAGAGCTCTTCAAAATCA
ATAATGGCGGCGGAGCAGTCAAAATGGAATTAAGATATGCCATCGAGGCA
AAACGAGCAGGAAAAGGACTTGATATGCCAATTCTCGAACAAATGCATCG
ATTACCAAAACAGTTAACGATAGAAGAAGAGGAAAGACGCCGGGTGCGCC
GTGAACGTAATAAAGTCGCCGCATCACGTTGTCGCGtcaaaagaaaatgt
cacgtcAGAAGACTGTTGAAGGAATCAGACGACCTGACGAAATCGAACAA
CAGTCTACAAAACGAAATCAATAAACTGGAATATGAGAAACAAAAACTAG
AAGGAGCAATCAAAAACCATGCGTGTAAAATGTCCAACAATGCTTTTTTG
GAGGTCCATGGTACCACAAAGGATCGGTTATGCCGTTATGGTAACTAGAT
GGATTTTGCTTTCTACTCGCAGGCCACGGGGAGTGTACCTGATTTGAGCC
ATGCGAATTATCAAGTGAGTAACGAAACAACCCAACAGACATGCGCAAGT
TTCACCACGAGTGAAGATGAAGAGCTCTTCAAAATCAATAATGGCGGCGG
AGCAGTCAAAATGGAATTAAGATATGCCATCGAGGCAAAACGAGCAGGAA
AAGGACTTGATATGCCAATTCTCGAACAAATGCATCGATTACCAAAACAG
TTAACGATAGAAGAAGAGGAAAGACGCCGGGTGCGCCGTGAACGTAATAA
AGTCGCCGCATCACGTTGTCGCGtcaaaagaaaatgtcacgtcAGAAGAC
TGTTGAAGGAATCAGACGACCTGACGAAATCGAACAACAGTCTACAAAAC
GAAATCAATAAACTGGAATATGAGAAACAAAAACTAGAAGGAGCAATCAA
AAACCATGCGTGTAAAATGTCCAACAATGCTTTTTTGGAGGTCCATGGTA
CCACAAAGGATCGGTTATGCCGTTATGGTAACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021166-exon-sc0000379-1491911889:246828..246972 | TCONS_00021166-exon-sc0000379-1491911889:246828..246972 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1510915933:246828..246972 | TCONS_00021166-exon-sc0000379-1510915933:246828..246972 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1575043694:246828..246972 | TCONS_00021166-exon-sc0000379-1575043694:246828..246972 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1491911889:253044..253271 | TCONS_00021166-exon-sc0000379-1491911889:253044..253271 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1510915933:253044..253271 | TCONS_00021166-exon-sc0000379-1510915933:253044..253271 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1575043694:253044..253271 | TCONS_00021166-exon-sc0000379-1575043694:253044..253271 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1491911889:255934..256018 | TCONS_00021166-exon-sc0000379-1491911889:255934..256018 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1510915933:255934..256018 | TCONS_00021166-exon-sc0000379-1510915933:255934..256018 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1575043694:255934..256018 | TCONS_00021166-exon-sc0000379-1575043694:255934..256018 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1491911889:256345..256367 | TCONS_00021166-exon-sc0000379-1491911889:256345..256367 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1510915933:256345..256367 | TCONS_00021166-exon-sc0000379-1510915933:256345..256367 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1575043694:256345..256367 | TCONS_00021166-exon-sc0000379-1575043694:256345..256367 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1491911889:256787..257831 | TCONS_00021166-exon-sc0000379-1491911889:256787..257831 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1510915933:256787..257831 | TCONS_00021166-exon-sc0000379-1510915933:256787..257831 | Clytia hemisphaerica | exon |
| TCONS_00021166-exon-sc0000379-1575043694:256787..257831 | TCONS_00021166-exon-sc0000379-1575043694:256787..257831 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000379 | supercontig | sc0000379:246828..257831 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription from RNA polymerase II promoter |
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| biological_process |
GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
Blast
The following BLAST results are available for this feature:
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