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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021292 ID=TCONS_00021292|Name=TCONS_00021292|organism=Clytia hemisphaerica|type=transcript|length=314bp
CACCCCAACTCCTGTCTGTCAAGTTTGCCACAGAGTAGATGGTCAATAGT
AAATAACCAGACGGTAAACAGAGTAGATACCAAAATCCATGAATAATGCT
CAACCCTTCAAATCCATGCAACATGGCCGTCATAAAGAAAatacctaaca
aaataaataaataccaCGTGGGCGGGGTAAACATCCACTTGTAGGTATCG
TACACAACCGGCGCTTTTGTGGTGGTTACAGTTCCGTTATGCCATCCAGG
CGTTTCTGTGGTGGGCGGTTTCACAGTGGGCGGATCGATATAACGCCCCA
CATCTTCTACAGTC Run BLAST on NCBI transcript from alignment at sc0000382:20486..21894+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021292 ID=TCONS_00021292|Name=TCONS_00021292|organism=Clytia hemisphaerica|type=transcript|length=1409bp|location=Sequence derived from alignment at sc0000382:20486..21894+ (Clytia hemisphaerica)
CACCCCAACTCCTGTCTGTCAAGTTTGCCACAGAGTAGATGGTCAATAGT
AAATAACCAGACGGTAAACAGAGTAGATACCAAAATCCATGAATAATGCT
CAACCCTTCAAATCCATGCAACATGGCCGTCATAAAGAAAATACCTAAAG
TAAAGATGGATAAATAAAATGGAAAAGTTTTTTAACAGATAAACTGAACG
TTAAAACGTATTCACATCTAACTCTCGAGCTCGAACGGCGAgactaattt
gttcgaattagagagagattcgaataatagaaaaaGCATTTCACAAAAGG
TTTccccttgacggggactgagaattaattcgaattatagaaagattcga
ataatagaagttggAATTATTGAAGAAGGAATTAAAGCCAGTTAATTAGC
CTGTATCATTGATAGGCTTTTCTGAAAATCCGGAAATTCCAGGAGGGTAA
TTTCCAATAAGGTATAGCCGAAGGCTAGAGTCAAATAGCCTATGTAGGAT
TTCAGATCGCATATTTCCTGTATAAATTGCACGGCCTACGTGGATTTTAA
TAAACGCTTGTTTGAAAGTAACAGGTAACCAGGATTCGCAAAATGTAAAA
TACGAAAACAAAGCAAATACTAGATTCAATCTGCCATCCGAAATGATGCA
AAATTATAAGGGATCGATTTTTGCTTTGCCTcggaaaggttgaagattcc
agTGTAAGTGTAacggtggaaatttcagcaaattttTTGGCTCTAAGTGT
TGAAATTTAGAGAACAATGCACTGCACGGGTATAAATTTCACCGATTTTA
TGCTGCACTATAATGGTACGATTCTAAATCCACACACACCGCCAGTGTGT
TTGCCACCACTTCTCTTACTCAATAGATAACTAAAATCATGGtgaaaatt
tattgagaatttagcttatttcctcgtttttcgaaatttggagttcgggc
gagaaagccgcttttgggctaattgataaatttattcgagtatttcaatt
cgggaggggtttatagacttccatgctatattctgagccttgttagacca
ttcttgaacttttggatccttagaTCCTAAGCTCTTAagtaatttagagc
gcttccaaatcgtttgtggttataagattccgtacaggaatttccctttt
ttcttaaATGATACGACTATGATTGTACACTGATCGTAAAAAGCTTTTTT
GATGAAGTACTtagtttttataataaaaattgaacatacctaacaaaata
aataaataccaCGTGGGCGGGGTAAACATCCACTTGTAGGTATCGTACAC
AACCGGCGCTTTTGTGGTGGTTACAGTTCCGTTATGCCATCCAGGCGTTT
CTGTGGTGGGCGGTTTCACAGTGGGCGGATCGATATAACGCCCCACATCT
TCTACAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021292-exon-sc0000382-1491911889:20486..20625 | TCONS_00021292-exon-sc0000382-1491911889:20486..20625 | Clytia hemisphaerica | exon |
| TCONS_00021292-exon-sc0000382-1510915933:20486..20625 | TCONS_00021292-exon-sc0000382-1510915933:20486..20625 | Clytia hemisphaerica | exon |
| TCONS_00021292-exon-sc0000382-1575043694:20486..20625 | TCONS_00021292-exon-sc0000382-1575043694:20486..20625 | Clytia hemisphaerica | exon |
| TCONS_00021292-exon-sc0000382-1491911889:21721..21894 | TCONS_00021292-exon-sc0000382-1491911889:21721..21894 | Clytia hemisphaerica | exon |
| TCONS_00021292-exon-sc0000382-1510915933:21721..21894 | TCONS_00021292-exon-sc0000382-1510915933:21721..21894 | Clytia hemisphaerica | exon |
| TCONS_00021292-exon-sc0000382-1575043694:21721..21894 | TCONS_00021292-exon-sc0000382-1575043694:21721..21894 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000382 | supercontig | sc0000382:20486..21894 + |
Blast
The following BLAST results are available for this feature:
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