TCONS_00021353 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021353
Unique NameTCONS_00021353
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2452

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021353 ID=TCONS_00021353|Name=TCONS_00021353|organism=Clytia hemisphaerica|type=transcript|length=2452bp
ATTGCTTTTACCATTATATATGTCCTGACTTAGcgtCTCGAAAAAAATGT
CTGAGAAAAGTAAACAAGAAGAGGAAAATGCAGAAGATGATAAAAAGAGT
GGTCGATTGAAAGAGGAGGTTATTAGTTACTTCAAGCGTGTTGAACAAGT
TCTTCTGGAGGATGCATTTGAAGATGGAAATCATAAAGAAGCATTTGTTA
AAAATGTCTTTCTGGAAGTGGAAAAAGAAGGCATGCAATTGGGTCGACAT
CCTATCACAAGTCGTGTTTTAGAACAATTGATTCCTTTGTTGAGTGATAC
TCAATATGAAACTTTGATTTTGTTGATGGAAAAAGAAGTGGAGACACTAT
GCACTGATCGTTTCGCCAGTCATGTTGTAGAATTGTTTTgcaaagaaatt
ataaaacacATGACAGAGGAACCAGTGGCAGACGCTTTTCTTGGTCTCTG
TAAGAATATAAAGAAACAAGTTGATGTCTTCTTGAGAGATACATATGGAA
GTCATGTTTTGAGCACCTTGCTTCAAACCTTGAGTGGTGTTCAGGTTCCA
GAAACAATAACCAAATCACGAATTTCTCGAGAGTcgaagaaagtgaaaaa
gaagaaaaagaagccaCAACATCCTCAGATGTTCCAAAATAATgTAAACT
TGAAAGACTCTGTAACCACCAGTGAAGTCCCAGATTCCTTTCACAAAATG
TATCGGAGGTTTTTAAAAACGATCAAAGATGATGATAACTTCGGTGAATT
ATTATGTCATCGAACAGCCAGTCCTGTCTTGCAGGTTCTCGTTATCACAC
TACAGAAAGTCAGCACTGAGAAATTCGCACAGATGACCGAATTGATCGTT
CGAAAAGCCAGGATTGagatgacgtcaccaaacaacaaagatggtgGAGA
AGGTGTGGATGATAGCGAcgaaagtgaagaagaagaagatgaagacaCTT
TTCATAAATTACCAGTCGTGTTAACGGATCAAGTAGGTAGCCATTTATTC
GAAGTGCTTTTACAAACAGCCGATGAAGAGACGTTTGACAACCTCACCGT
ACGGTGTATGTTGAAGATGTTGGTCTCACTCAGTATCCACCCTATCGCTA
ACTTCCTGGTACAAACCATGCTCAGATGTatggataaaaagaaaaagGCC
AAACCATTCATTCGTAAATtatcaaagtttactgaagatATCTTAGCCGC
TGGCCACATGGGTTGTATCGTTCGAGTGGCTGAATcgatatccaggctag
gtttATCAGACCAAGAAGAGAAGTTCATTGAGACGTTGACGCGTTCTTTA
CATATCCCTGAAGATCCAGAAAAGATGGAAAAATCGTTCTGCAAATTAGT
CCTCTCTATGATGACTCAtgatattttttacaaagttgAGCTTATACCGA
GCGGAGAACCCGACCATTCGTTGAAAAACGATGCAATCAATTACCACGGT
GCCTGTTTGTTGAAAAGTTGTCTATTCTTCAAGAAATGTCAAATGCTTGC
TAAAAGTTTGTTGAGTTTGAATAAGGAAGAGTTGACAACAGTCGCGTGTC
ATCCAAGTGGGAATCACGTTTTCGAAAGCTTTCTCAGTAACACaaacatt
aaaaagaaaatgaagaactCTTTATCTGATATGTTTCGAGGGAAATTCGC
GGTATTAGCGAGCGATAAATTTGGCAGTCGAGTAATTGATGCTTTATGGA
AAAACGTTGGAGAGGAATCTAAAGACTTTATTAAAACTGAGTTAACTCAG
AATAAATCGAGATTGGAATCAGATTTATATGGACGTATTGTGCTATGTAA
TTGTGAGATCAACCAACAGGCGCGCAAAATGAGAGAGATTAAGGAGAAAC
AggataaaaagagaaaaatattcgAAGATATTTTACCGGTATCGAAAAAA
GAGGAGAAATCTGTAATGGTTAAGGAGGAGGAACAACCGCCTGCTAAGAA
AGCCAAAGGAAAGAATAAAAATGATCGTGTGGCGAAATATCGTGAGCAAC
TCAAAGCGTTAGGCATCAGTTTTGACGATGAAGAGCAAACTTAATGACAG
gTTGGTTATCGAAGCGACATCAAATTTGTAAtcattatcaatttttttta
actatcGATCTTCATTGATGTTGTAAATTATAATTACCATGATTTATTGT
TCTCAGAAAATAAATTAGTCTCTCCAAAAAACTCTCCATTTCTTGCTTTG
AATGTTCATTTGTTTCATTGGTGAACAGGAGGTCCTTGCTTCCATCTTTT
GAAATAATAAGCTACGATGCCAGCGAACATGAATGATGAAAGGAATCCAA
ATGCCTGAAAATGAGAAGAAATAACCTGTTTGTAATATTGCTTTCTTTCC
CTTAAAGgtacaatgccggacaaaaggttgtagacaaatggaatttcagt
aaaaaatgatgagaaatagagcaaaatgactcttcaatgtgtctgaaagg
gg
Run BLAST on NCBI

transcript from alignment at sc0000385:51333..65434-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021353 ID=TCONS_00021353|Name=TCONS_00021353|organism=Clytia hemisphaerica|type=transcript|length=14102bp|location=Sequence derived from alignment at sc0000385:51333..65434- (Clytia hemisphaerica)
ATTGCTTTTACCATTATATATGTCCTGACTTAGGTTATTATATTCAATTT
TGAAGCACATTAATATGTTTCTTTTTTATTTTACCATAACTTTGACCCCT
GCCCTTCACCCTTTGCGAGTTCTCTTCATTGGTTCCCTACGCTGTGCAGT
ACGCCATACGCTGAGCGATCTCTTGTAGTCCAGGAACTGGAGCTCAACTA
CTTTTTGCCTTTACTAATTCTGATGGGGGGAAAAGTATCGAAGCGCCATC
TTTCAAATCAGAAAGTGAAGATAGTATACGACAGATTTTCTGACTAGATC
TCTTGCAACCCATCTCTTGAGCGGCTAGTTCGAAACGCAGGTTCAGGTTT
CAGGTTTCAGGTTACAGGTTAAATCTTTTTGATGGAACTTCCAAAAATAA
AATATCCCAACGTGTAGAGTGGAGCTTCGGGGTTTCGACAATATATAAAT
TATTCTATAATTGTTAGTAGTCATTGAATTATCATACAAAGTATAAAATG
TCTGTTTTCATTTTGAAACGCGTTCAATTTTACAGACTGGTGTTTCCAAT
CCGAGGTTCACGCACTGTGGATCCCCTGATCGGAATTAGACAAGGGATGT
CGATACTCAAGTGAGTTACGGCATGTCCGAAGTAAAAGTGAAGCAGTTCC
ACTCACTTTCAAAATGTCAATTATAGCTGGAAAGAAGTGCCTTATGATGT
AGATTAACGCGATAGCTGTATGAAAAATTTAACTTGAAGCTATAAGAAGT
TATAGCCCAAAAACCTCTATTATGACGTCATAAACATTACGTACAATTAG
GAACATTTGGCGAGTTCCTGTACGCGGCCGCAATCAAAAAAATCATAACA
ACACTCATTAAAATAAGGCGTTCGTGTCTTTTCTCACTTTTTTTAGCCTA
GACGATGTAGCAAACAAAGGAAGTATAAGCACACTGTGCTTTTAATTGGC
TGAAATTTTTTTTCGCGTCGGAAAAACTTTTTCAAACTTTCAGCAATGAT
TGACCAAACTATTTTAATGAAAATTATCCAGCGCATTTTTTATCTTCTTA
CCTTCTTCATCTTCATTGAAGCACTCAAGGTTTACTGAAGTTAAGCTTAT
AAGATATTCTTATAATTATTGATATTCACTGAAACACCGTTCTTTGTGCG
CTGAGATGGAGTGCGTGATGTAACTCGCGCGGCAACTAATTTTGCTGACT
CAGCAGAAAAGCAGTGTAGCTGGAACTTCGATATTCCCGCGCGAGAATAC
GAGCTAATCATTTTTTTCTCGCGCGCTCGAGGGGAAAAAGAAAGTGATCG
ATATTCTTTGAAGGAAAAACGTCAGAAACCAACCCAAAGACTAAAATATG
TATTTTGTTGTTGAGAATTGATCCTGTGAAGATAAAAAAAATTTGCTTCG
CGTTTTTTTCGGAACGCTGAAAAACTCTAATTTTGATCTTCCTTTAAGGT
ATAGAGGTTGCGAGATTTGGGTTAGCAAGGCAAAAATCGCTAAAAACTCG
GGTAACTTAATGCATGTCCCAGAATTGCATTAATTTTTCCGCCCCAGTTC
CAGTCCCTAAACCATAACAAACTATACATTTTTGGAAGCGTATATTTGGA
TGTAGAATACCGTATTTGGTGTAACTTAAATTCTTTCTCAGCAGAATTTG
AGTTTTTTTAAGAAAACATGATTATGACGTCATTATTTATGACGTCATAG
TTTTTAAAAATTGAATATCTCAATAACTAATACTCAAAGCTTTATGAAAT
TTGGACCAATGATAGAACTCATCAAGAAGAGGAGAATTTTTTTCAAAAAA
TTTGAAAATTTGCTGATGTCAGCATTTTATCGCAAAAATTCGAAATCTTG
CAATTTTTGCTGACGTCATTAATTTTGGGAAATACTTTTAAAAGTTTTTG
AAACATCTCAATCTACTTTATCACTGGTCCAAATTTCATAAAGTTTTGAT
TTATATTTCTCGAGATATTCAACTTTTTGTTTTTATGACGTCATCAATTA
TGACGTCATAATCAGTTTTTTTTAACATATCTCTAATTATACTGAGAAAG
AATTTAAGTTACACCGAATACGGTATTCTACGTCCAAATACGCTTCCAAA
AATGTATATGTTGTTATGGTTTAGGGACTGGAACTGGGGCGGAAAAATTA
ATGCAATTCTGGGACATGCATTAAGTTACCCGAGAAGCTGGTAAAATCGT
AATCCTCAAAAATCGAAGTTCCAGCCTCACTGAAAAGGGACAAAAACGTT
GAAAAACGCTGAGTCAGCAAAATTTCAAACTCAAATATCTCATGATCTAG
CCTAGAAAACCCTATAAATGACCCATCTAATCGATAGTACTCTTCGAAAC
ACATCTGTTAAAAGTGGTATCTTTCTCTGGAAATTATCTCAAAAATGGTG
ACGTCAGCATAAAATATTGCATTTTTGAAGACGTATCAGCCAATTCCGGG
GGACTAAGTCCGCCAAATGAGACAAATGACCCCATTTTGGAGATCTACTC
TTCAAGCTCTATCTGATGCTGCAATCAGTTTTAGCTAAATAAGAACTTCA
AAAATCGACTTTCTAAGAACCCCCAGGCTAAAATGACCCTACCCCCTTCA
AGCCCCCATAAAAAAATTTCCCCAGCTTTACCGGCCTTTACCAGCTTGGC
AAAAACCGGTTTTGGGGTCCCAAGGGACCATATAATGAGAAAATAAAATA
AAAACCCATATTTACTACTTGTAAGGGTTGATGCNAAATTTCCCCAGCTT
TGCCAGCTTGGCAAAAACCGGTTTTGGGGTCCCAAGGGACCATATAATGA
GAAAATAAAATAAAAACCCATATTTACTACTTGTAAGGGCTGATGCAAAA
AAGCCCTTTTCGCCGCCGGACTAATATGACGTGTATATGACTTTTAGTTC
ACGAGATATTCAAATTTTTAGTTTAATGAAGTATATAATGTTACATAATG
TTTATGACGTCATAATACAGGTTTTTGGGATATAACTTTATATAGCCTTA
AGTTAAATTTTTCATACAGCTATCGCGTTGATCTACATCATAAGGCGCTT
CTTTCCAGCTATGTTTGACATTTTGAAAGTGAGTGGAACTGCTTCACTTT
TCCTTTGGACATGCCGTAACTCACTTGAGTATTAGACCAACTTGTGGTAC
ACATACAAAGTTTCTAAAGTTTTAAAAGTCTGATGCAACTAAAAAAGTCT
AGCATTACTTGAATGACACAGTCTCTATAATATTTACTGTAAAACCAGAC
TTGAGATGTTCATTTTGTGTAAGACATAAAATCTTTGAAATTTTTCTCAA
AACTCCAACATGTGTGAGAAATCCAACTTTTCAAAAATTGCATGAGACAT
GACATGTGGAAATGTGCAAGTCTCACACCCAATGCCAGCCCTCGAAATTC
AAGTAAAAGTAAGTCGGCACGAAAGTGCCTTCCAAATCCGGCCGAAGGCC
GGCAAAATTTTGCCGACCTAAGCTTGTTTTTAGGTCGGCAATGCCGATCT
GAGCTATATTTTAGGTCGGCAAAGTTGTTTAAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
ATCAATGAATATGGTCGGCAATGAACTGCCGACCATACGCACTCTTTGGT
CGGCTTTTAGGTCGGCACTGCCGAATGCCGACCTGAAATTCGAGGGCTGC
AATGCAAAAGTTTGAGTCGTGAAAGTGGGCAGAATAGGGATGGCAAAACT
GAACCAAATCAGTGCTCACAAAAAGCATTTGATTGTTCAGGGGACTTTTG
TGGATTGTTATGGGTAAGTACGCACAGTACAGTAAGTTGGTCTAATATCG
CCATCCCTCTTCTAATTCTGACACCCAGTTTTAGAGATAGGCATAATAGT
AAGGTCAGAATCACTGATAGACAAAGAATTTTTTCCTCTCTGGTTGCTAA
GTAAAAAAATATACAGTTTCCATAAGCGATTCTGACCTTTCTACTATTCC
CATCTCTAAAGTTAAAAAGGGTGTCAGCATTAGAAGAGGGATGTTGGCAT
TAGACCAAGTTATGGTACTATGTTAGAGCAATTATTCTACATAGTGTATT
CTGGTTTCTGCCTTCTTTGAAAACACCAGATCTGCCAACTCTCACGCATT
GAGTGTGAGACTCACGCATTTCAACATTGTCTCACTCAATTTTTGAAAAA
CTTGATTTCTCACACTATCTCACGCATTTTTGGTTTTGCAAAAACTTTCT
CCGAATTTTGGCAAAAAAGTCTCCCTGATTTTCCACTTTCCGAAGAAATC
TTTCCTTGATTTTCCGAATTCGGGAAAATGTTTCCCAGATATCTCGGTTT
TTGGAAAAATCTTCCCTGATTTTCTGATTTTTGGAAAAGTTTCCCTAATT
TCCAAATTTGGAAAATCGGAAAACTGGGCTATGATTTCGGATTTAACTTG
GAAATTTTTATCTCACGCAAAATGTACATCTCAAGCTGGCAGGTCTGAAA
CACACCCTATGGAATGTTTCTAAAGAAAGGAACTTCTAAAACAATGTCAT
GAAAAAAATTTGACATTATACAAAGTTACACTGAAGTGCAACAGCTTCAA
AATCGAGGAACAAATTATATTTGAAGTTTAGTTTTTGATTTACATAATCT
TTTGCATTAAAAAGCAGACAATGAAAGGGTATTTCAGTAAGCATCAAAAA
GCTAATAATACGTCAGGAAAAGAGGTTAAAAACCCTTTGTCTGAAAAGCT
GAAAACCAAGCTGAAGAGCATTTTGAAGGTTGTTGTATATACAACTTTTT
TTAAACAACTTTTTTTAAATGTTGAACGATGAAAAAGAATGCGGCTATTT
GATTTTGATTTTTCTCGACATGTTTCTGACTCAGTCCGGTCTCAAGGGAA
TCAACAACCTTTTTAAAAAGTGTTCAATTGACATAATAAAGACATCTATC
ACAGAATTCTTTTAGTTTTGTCCAGCAGGGTGATTTCATCCTCACAACAC
TGTTTCCTGTTGAAACATGAAATTTACCAGTAAAATACTCAACTTTGATC
AAGCGTATTATAAACTTTTCTATGCTTACTAAATGCGCTAGATAATACCC
TGGCATTGTCTGGGTTTTGAAGATTACTAATTCTTCAAAATCAAAACGTT
TGAACTCTTTTCTTACTTATTGAAATGATTAATATTTTATGACATGTTGT
TTAAAAAAAGTTCCCCTCTGCAACATCAAGATATTCCTGGGACAAGCTTA
AAAGATACTTTGTTTTACATTAATACACGGATTTCGGATTAGATTTTTGC
ATAGCTTTTGCTTCGAGCCCATGTAATTTGCACGAAAAAACATCAAGTAA
ACAAAACAGAAAGTGGGCCTGCGACAAACAACTTTAGCTCATTTTTCCAT
TTTGGCATATTGCATCATGGGTAACTATAACAGCCTTAAACATAAAAATG
ATAAGGCAATTGTATGATCTTATTTCTTTTATATATTGAATTTCAAAATA
GAAAAACATTTTTTGAATTAATAAAAAGAGAAATAAGAACATCTATCAAC
ATTTTATAAGGCATTTACGCTCGTCACTCGCTGTGTTTACTTGATCTTTC
TGTGAGCATAGTGAATTAGTACAATCTTTTTTCGTGGATTTGTCGTTCTG
ATATGAAAGTAGGAAAACCATGATGTTTTTTTCATTTCAGCGTCTCGAAA
AAAATGTCTGAGAAAAGTAAACAAGAAGAGGAAAATGCAGAAGATGATAA
AAAGAGTGGTCGATTGAAAGAGGAGGTTATTAGTTACTTCAAGCGTGTTG
AACAAGTTCTTCTGGAGGATGCATTTGAAGATGGAAATCATAAAGAAGCA
TTTGTTAAAAATGTCTTTCTGGAAGTGGAAAAAGAAGGCATGCAATTGGG
TCGACATCCTATCACAAGTCGTGTTTTAGAACAATTGATTCCTTTGTTGA
GTGATACTCAATATGAAACTTTGATTTTGTTGATGGAAAAAGAAGTGGAG
ACACTATGCACTGATCGTTTCGCCAGTCATGTTGTAGAATTGTTTTGCAA
AGAAATTATAAAACACATGACAGAGGAACCAGTGGCAGACGCTTTTCTTG
GTCTCTGTAAGAATATAAAGAAACAAGTTGATGTCTTCTTGAGAGATACA
TATGGAAGTCATGTTTTGAGCACCTTGCTTCAAACCTTGAGTGGTGTTCA
GGTTCCAGAAACAATAACCAAATCACGAATTTCTCGAGAGTCGAAGAAAG
TGAAAAAGAAGAAAAAGAAGCCACAACATCCTCAGATGTTCCAAAATAAT
GGTGAGTTCAAACTTTAAATAACGCTCATCTGCTTTTGACAATGTGTTCA
TGATATATTGATAACTGGATATTGTTATTGATGCACATGTACACGCTTTT
TGTAAGAATGGTGCTTTCCTCTTTATTTTGCAGATGAACAGTAGGTGTTA
AACAGCTCGTCAATCTAAGTTTTTGACAAATCTGGCTTTATTTCATTTGT
TTTTCAGTAAACTTGAAAGACTCTGTAACCACCAGTGAAGTCCCAGATTC
CTTTCACAAAATGTATCGGAGGTTTTTAAAAACGATCAAAGATGATGATA
ACTTCGGTGAATTATTATGTCATCGAACAGCCAGTCCTGTCTTGCAGGTT
CTCGTTATCACACTACAGGTAGGAAAACCACTTCATTAAGACCTTCAACC
TCTAGAGTACAATTAGAGTACATTGTTCTTATGAAAAAGCGTATATTTGA
ATATGAAACACTTTGGAATGAAGCTGAAATGACATGATTTGCTTCCATAA
CAATTTAAACAAAAGAAAAAACAGCTTTCTCCCCTATCGGCGCCGCCCTA
GCACAATTTTGAGAAATTCTTTTGTGTATTCGAGGCGAGGCTCCTTTTAA
ATATCATGAAAAAGACTATGTTTAAAAGTATCTACTACTTCTTTTCTAGA
AAGTCAGCACTGAGAAATTCGCACAGATGACCGAATTGATCGTTCGAAAA
GCCAGGATTGAGATGACGTCACCAAACAACAAAGATGGTGGAGAAGGTGT
GGATGATAGCGACGAAAGTGAAGAAGAAGAAGATGAAGACACTTTTCATA
AGTAAGATGTTTTTTTTATTTTCTAACATCGAATATTTTATGAGACAGGA
GGTCTCAATATCGATCCAACATCACCAAAAGTAAATTAGGAACAAACAAT
GTTTTAGTTGATAATTTACTGACTGATTATTGTGAGAGTTCGAGGAAGGG
CGAAGGAGTGGGATTCTGTTTTGAAAGCGTTGAAAAATCAATTATCATCC
AGAAAGGAGCACTGAACAACACCTTTCATGACCAATGTTTAGCCTAACTC
CGAACGGATTCTGACTACTCCGTGGTGGTACATAATATGACGTCGCTCAG
GTTCGCCGTTCGCTTTTGGACTTTTTATTCAGTTTTTGGATGAACTTTTC
ATAAGCTTTTTTGAGCGCCATGATTGGCTTAAGCAAAACAATCGCACCAA
AACAAGACCAATCATAAGCATAAGCATAGTAGAAGCCACTCACTTCTACT
TTCATTTTCAAGCAAAAAGAAAACGTGGTTTTGAATGTTTTGGCTGAACT
ACCAGCTCAGATCGTAAATTAGCCATATCCCTTTAAGAGCAGAGCATGTT
ATACGCAGAGTGGATAATCTACTATGAGCTTATGTTTAGCTGTGAACTTT
TTTTTAGTTCGATGTTTTTATTACTTTTTCAGATTACCAGTCGTGTTAAC
GGATCAAGTAGGTAGCCATTTATTCGAAGTGCTTTTACAAACAGCCGATG
AAGAGACGTTTGACAACCTCACCGTACGGTGTATGTTGAAGATGTTGGTC
TCACTCAGTATCCACCCTATCGCTAACTTCCTGGTACAAACCATGCTCAG
ATGTATGGATAAAAAGAAAAAGGTACGCATATTCCTTTGTTGTGTGGGGA
CTTGCCTACAATGCATTTTCTTTAGAAATTCATCGGTAATGCAACAAAAT
CCCTCTCATTGTTTTAACCGTATTTTGGATCCGTAGGGTCAGTATATGTA
CATGTTCTTTGTGACTTTCGGAGGGGTTTTGTTTCACTTTTATCAGACCA
GCAAATGGGAAATTAACGAATTATGCGAATTATGAAGTTCTAGGTCAGCG
AAATTATGCAAACTTAGTTGATCTCCACGACCGCAAAATTAAAGACCTTT
GTTTCAAACGCCAGCTGAAACCTCTTAGCTTTTTATGTGGACAAAGTTAA
TCATACTTCGTTNGAAAGGAGCACTGAACAACACCTTTCATGACCAATGT
TTAGCCTAACTCCGAACGGATTCTGACTACTCCGTGGTGGTACATAATAT
GACGTCGCTCAGGTTCGCCGTTCGCTTTTGGACTTTTTATTCAGTTTTTG
GATGAACTTTTCATAAGCTTTTTTGAGCGCCATGATTGGCTTAAGCAAAA
CAATCGCACCAAAACAAGACCAATCATAAGCATAAGCATAGTAGAAGCCA
CTCACTTCTACTTTCATTTTCAAGCAAAAAGAAAACGTGGTTTTGAATGT
TTTGGCTGAACTACCAGCTCAGATCGTAAATTAGCCATATCCCTTTAAGA
GCAGAGCATGTTATACGCAGAGTGGATAATCTACTATGAGCTTATGTTTA
GCTGTGAACTTTTTTTTAGTTCGATGTTTTTATTACTTTTTCAGATTACC
AGTCGTGTTAACGGATCAAGTAGGTAGCCATTTATTCGAAGTGCTTTTAC
AAACAGCCGATGAAGAGACGTTTGACAACCTCACCGTACGGTGTATGTTG
AAGATGTTGGTCTCACTCAGTATCCACCCTATCGCTAACTTCCTGGTACA
AACCATGCTCAGATGTATGGATAAAAAGAAAAAGGTACGCATATTCCTTT
GTTGTGTGGGGACTTGCCTACAATGCATTTTCTTTAGAAATTCATCGGTA
ATGCAACAAAATCCCTCTCATTGTTTTAACCGTATTTTGGATCCGTAGGG
TCAGTATATGTACATGTTCTTTGTGACTTTCGGAGGGGTTTTGTTTCACT
TTTATCAGACCAGCAAATGGGAAATTAACGAATTATGCGAATTATGAAGT
GCTAGGTCAGCGAAATTATGCAAACTTAGTTGATCTCCACGACCGCAAAA
TTAAAGACCTTTGTTTCAAACGCCATCTGAAACCTCTTAGCTTTTTATGT
GGACAAAGTTAATCATACTTCGTTCCGTAACAATCAGAAAATAGCTTTAA
ACTAATTACTAGCATTCATTGTAGACTGATTTAATCATTTTATTGTAGGC
CAAACCATTCATTCGTAAATTATCAAAGTTTACTGAAGATATCTTAGCCG
CTGGCCACATGGGTTGTATCGTTCGAGTGGCTGAATCGATATCCAGGCTA
GGTTTATCAGACCAAGAAGAGAAGTTCATTGAGACGTTGACGCGTTCTTT
ACATATCCCTGAAGATCCAGAAAAGATGGAAAAATCGTTCTGCAAATTAG
TCCTCTCTATGATGACTCATGATATTTTTTACAAAGTTGAGCTTATACCG
AGCGGAGAACCCGACCATTCTTTNAAAAAGAAGCCACAACATCCTCAGAT
GTTCCAAAATAATGGTGAGTTCAAACTTTAAATAACGCTCATCTGCTTTT
GACAATGTGTTCATGATATATTGATAACTGGATATTGTTATTGATGCACA
TGTACACGCTTTTTGTAAGAATGGTGCTTTCCTCTTTATTTTGCAGATGA
ACAGTAGGTGTTAAACAGCTCGTCAATCTAAGTTTTTGACAAATCTGGCT
TTATTTCATTTGTTTTTCAGTAAACTTGAAAGACTCTGTAACCACCAGTG
AAGTCCCAGATTCCTTTCACAAAATGTATCGGAGGTTTTTAAAAACGATC
AAAGATGATGATAACTTCGGTGAATTATTATGTCATCGAACAGCCAGTCC
TGTCTTGCAGGTTCTCGTTATCACACTACAGGTAGGAAAACCACTTCATT
AAGACCTTCAACCTCTAGAGTACAATTAGAGTACATTGTTCTTATGAAAA
AGCGTATATTTGAATATGAAACACTTTGGAATGAAGCTGAAATGACATGA
TTTGCTTCCATAACAATTTAAACAAAAGAAAAAACAGCTTTCTCCCCTAT
CGGCGCCGCCCTAGCACAATTTTGAGAAATTCTTTTGTGTATTCGAGGCG
AGGCTCCTTTTAAATATCATGAAAAAGACTATGTTTAAAAGTATCTACTA
CTTCTTTTCTAGAAAGTCAGCACTGAGAAATTCGCACAGATGACCGAATT
GATCGTTCGAAAAGCCAGGATTGAGATGACGTCACCAAACAACAAAGATG
GTGGAGAAGGTGTGGATGATAGCGACGAAAGTGAAGAAGAAGAAGATGAA
GACACTTTTCATAAGTAAGATGTTTTTTTTATTTTCTAACATCGAATATT
TTATGAGACAGGAGGTCTCAATATCGATCCAACATCACCAAAAGTAAATT
AGGAACAAACAATGTTTTAGTTGATAATTTACTGACTGATTATTGTGAGA
GTTCGAGGAAGGGCGAAGGAGTGGGATTCTGTTTTGAAAGCGTTGAAAAA
TCAATTATCATCCAGAAAGGAGCACTGAACAACACCTTTCATGACCAATG
TTTAGCCTAACTCCGAACGGATTCTGACTACTCCGTGGTGGTACATAATA
TGACGTCGCTCAGGTTCGCCGTTCGCTTTTGGACTTTTTATTCAGTTTTT
GGATGAACTTTTCATAAGCTTTTTTGAGCGCCATGATTGGCTTAAGCAAA
ACAATCGCACCAAAACAAGACCAATCATAAGCATAAGCATAGTAGAAGCC
ACTCACTTCTACTTTCATTTTCAAGCAAAAAGAAAACGTGGTTTTGAATG
TTTTGGCTGAACTACCAGCTCAGATCGTAAATTAGCCATATCCCTTTAAG
AGCAGAGCATGTTATACGCAGAGTGGATAATCTACTATGAGCTTATGTTT
AGCTGTGAACTTTTTTTTAGTTCGATGTTTTTATTACTTTTTCAGATTAC
CAGTCGTGTTAACGGATCAAGTAGGTAGCCATTTATTCGAAGTGCTTTTA
CAAACAGCCGATGAAGAGACGTTTGACAACCTCACCGTACGGTGTATGTT
GAAGATGTTGGTCTCACTCAGTATCCACCCTATCGCTAACTTCCTGGTAC
AAACCATGCTCAGATGTATGGATAAAAAGAAAAAGGTACGCATATTCCTT
TGTTGTGTGGGGACTTGCCTACAATGCATTTTCTTTAGAAATTCATCGGT
AATGCAACAAAATCCCTCTCATTGTTTTAACCGTATTTTGGATCCGTAGG
GTCAGTATATGTACATGTTCTTTGTGACTTTCGGAGGGGTTTTGTTTCAC
TTTTATCAGACCAGCAAATGGGAAATTAACGAATTATGCGAATTATGAAG
TTCTAGGTCAGCGAAATTATGCAAACTTAGTTGATCTCCACGACCGCAAA
ATTAAAGACCTTTGTTTCAAACGCCAGCTGAAACCTCTTAGCTTTTTATG
TGGACAAAGTTAATCATACTTCGTTCCGTAACAATCAGAAAATAGCTTTA
AACTAATTACTAGCATTCATTGTAGACTGATTTAATCATTTTATTGTAGG
CCAAACCATTCATTCGTAAATTATCAAAGTTTACTGAAGATATCTTAGCC
GCTGGCCACATGGGTTGTATCGTTCGAGTGGCTGAATCGATATCCAGGCT
AGGTTTATCAGACCAAGAAGAGAAGTTCATTGAGACGTTGACGCGTTCTT
TACATATCCCTGAAGATCCAGAAAAGATGGAAAAATCGTTCTGCAAATTA
GTCCTCTCTATGATGACTCATGATATTTTTTACAAAGTTGAGCTTATACC
GAGCGGAGAACCCGACCATTCGTTGAAAAACGATGCAATCAATTACCACG
GTGCCTGTTTGTTGAAAAGTTGTCTATTCTTCAAGAAATGTCAAATGCTT
GCTAAAAGTTTGTTGAGTTTGAATAAGGAAGAGTTGACAACAGTCGCGTG
TCATCCAAGTGGGAATCACGTTTTCGAAAGCTTTCTCAGTAACACAAACA
TTAAAAAGAAAATGAAGAACTCTTTATCTGATATGTTTCGAGGGAAATTC
GCGGTATTAGCGAGCGATAAATTTGGCAGTCGAGTAATTGATGCTTTATG
GAAAAACGTTGGAGAGGAATCTAAAGACTTTATTAAAACTGAGTTAACTC
AGAATAAATCGAGATTGGAATCAGATTTATATGGACGTATTGTGCTATGT
AATTGTGAGATCAACCAACAGGCGCGCAAAATGAGAGAGATTAAGGAGAA
ACAGGATAAAAAGAGAAAAATATTCGAAGATATTTTACCGGTATCGAAAA
AAGAGGAGAAATCTGTAATGGTTAAGGAGGAGGAACAACCGCCTGCTAAG
AAAGCCAAAGGAAAGAATAAAAGTAAGTAATGATTCTTAAGGCTTGAATA
TTTTGCAATGATTTGATTTGCACCTTACTCAAATTTGAATGTAACTAGCT
GATACGTTAAGGTTTTTCTTTTAGAATCTTTCTGATGCATTGCTCTTGAA
AGAGAAATGAAGTGAAGCTTTGAATTATTTTAATAATATGTAAATAAAGT
ATGAAAATGGAAGAAAGAACAACGAGTTTTTTGTACTAACATTCTTTTCA
GGCCTTTTTAAATCAAAAGGAACAATTCCAATCGTTTGGTCGATTTTACC
CCCAATATTCCAGTTTAAGGCTTTTATTTCTCAAAAATTCATTCTTTTCT
TTCGTCAGATGATCGTGTGGCGAAATATCGTGAGCAACTCAAAGCGTTAG
GCATCAGTTTTGACGATGAAGAGCAAACTTAATGACAGGTAAGTTGTTAT
TTAATAACGTTTCAAGTTTAAGGTTATTGTCAATCTAGGATTTTTTCGAG
ACCCAGGAAACGGTTTTCCCACCGCCCCAGGTATTACTTTTGAAAATTCA
GCCCCTAATGAAGTACGAAGAAAATCAATGTATTATTAAATAAGTGGAAA
GTATTAGTATTAGTAATAGTATTTAAGTATTATTGTGACATTATCATCAG
GTATAATATTATCTTTTATCGTAAAACATCTTCTTTTTTTTCACTTTTAG
GTTGGTTATCGAAGCGACATCAAATTTGTAATCATTATCAATTTTTTTTA
ACTATCGATCTTCATTGATGTTGTAAATTATAATTACCATGATTTATTGT
TCTCAGAAAATAAATTAGTCTCTCCAAAAAACTCTCCATTTCTTGCTTTG
AATGTTCATTTGTTTCATTGGTGAACAGGAGGTCCTTGCTTCCATCTTTT
GAAATAATAAGCTACGATGCCAGCGAACATGAATGATGAAAGGAATCCAA
ATGCCTGAAAATGAGAAGAAATAACCTGTTTGTAATATTGCTTTCTTTCC
CTTAAAGGTACAATGCCGGACAAAAGGTTGTAGACAAATGGAATTTCAGT
AAAAAATGATGAGAAATAGAGCAAAATGACTCTTCAATGTGTCTGAAAGG
GG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011961XLOC_011961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021353-exon-sc0000385-1575043694:65402..65434TCONS_00021353-exon-sc0000385-1575043694:65402..65434Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1575043694:58584..59194TCONS_00021353-exon-sc0000385-1575043694:58584..59194Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1575043694:58217..58377TCONS_00021353-exon-sc0000385-1575043694:58217..58377Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1575043694:57784..57935TCONS_00021353-exon-sc0000385-1575043694:57784..57935Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1575043694:56963..57152TCONS_00021353-exon-sc0000385-1575043694:56963..57152Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1575043694:52413..53235TCONS_00021353-exon-sc0000385-1575043694:52413..53235Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1575043694:51997..52076TCONS_00021353-exon-sc0000385-1575043694:51997..52076Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1575043694:51333..51734TCONS_00021353-exon-sc0000385-1575043694:51333..51734Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:65402..65434TCONS_00021353-exon-sc0000385-1510915933:65402..65434Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:58584..59194TCONS_00021353-exon-sc0000385-1510915933:58584..59194Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:58217..58377TCONS_00021353-exon-sc0000385-1510915933:58217..58377Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:57784..57935TCONS_00021353-exon-sc0000385-1510915933:57784..57935Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:56963..57152TCONS_00021353-exon-sc0000385-1510915933:56963..57152Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:52413..53235TCONS_00021353-exon-sc0000385-1510915933:52413..53235Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:51997..52076TCONS_00021353-exon-sc0000385-1510915933:51997..52076Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1510915933:51333..51734TCONS_00021353-exon-sc0000385-1510915933:51333..51734Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:65402..65434TCONS_00021353-exon-sc0000385-1491911889:65402..65434Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:58584..59194TCONS_00021353-exon-sc0000385-1491911889:58584..59194Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:58217..58377TCONS_00021353-exon-sc0000385-1491911889:58217..58377Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:57784..57935TCONS_00021353-exon-sc0000385-1491911889:57784..57935Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:56963..57152TCONS_00021353-exon-sc0000385-1491911889:56963..57152Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:52413..53235TCONS_00021353-exon-sc0000385-1491911889:52413..53235Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:51997..52076TCONS_00021353-exon-sc0000385-1491911889:51997..52076Clytia hemisphaericaexon
TCONS_00021353-exon-sc0000385-1491911889:51333..51734TCONS_00021353-exon-sc0000385-1491911889:51333..51734Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:51333..65434 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.36218	1.58579	1.20689	0.100177	4.01333	3.64323	0.502418	3.13555	2.3128	2.53704	1.70787	2.45613	5.79375	6.911	4.26172	4.43287	1.73213	3.14649	2.06555	1.11401	3.65624	3.62452	5.62585	5.61053	5.14375	6.17916	1.32529	2.08438	2.59893	2.69303
Blast
[Close]
BLAST of TCONS_00021353 vs. Swiss-Prot (Human)
Match: NOP9 (Nucleolar protein 9 OS=Homo sapiens GN=NOP9 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.630e-26
Identity = 115/497 (23.14%), Postives = 207/497 (41.65%), Query Frame = 2 
Query:  440 LGLCKNIKKQVDVFLRDTYGSHVLSTLLQTLSGVQVPETITKSRISRESXXXXXXXXXPQHPQMFQNNVNLKDSVTTSEVPDSF----HKMYRRFLKTIKDDDNFGELLCHRTASPVLQVLVITLQKVSTEKFAQMTELIVRKARIEMTSPNNKXXXXXXXXXXXXXXXXXXXTFHKLPVVLTDQVGSHLFEVLLQTADEETFDNLTVRCMLKMLVSLSIHPIANFLVQTMLRCMDKKKKAKPFIRKLSKFTEDILAAGHMGCIVRVAESISRLGLSDQEEKFIETLTRSLHIPEDPEKMEKSFCKLVLSMMTHDIFYKVELIPSGEP-DHSLKNDAINYHGACLLKSCL------FFKKCQMLAKSLLSLNKEELTTVACHPSGNHVFESFLSNTNIKKKMKNSLSDMFRGKFAVLASDKFGSRVIDALWKNVGEESKDFIKTELTQNKSRLESDLYGRIVLCNCEINQQARKMREIKEKQD----KKRKIFEDIL 1885
            LGL   +     V+  DT+GS V+ TLLQ L G  +     + R S+ S+               Q     +      EVP++F      +   FLK I         +  + +S  LQV +  L +   +  A +   ++       +S +                         L + L DQ  S L E +L   +     +L    +   L +L+ HPIANF +Q +L  +   +   P   +LS   E +LA GH G ++ +  +  R+G    + K ++ L  + H  E P   + +   L  ++M ++++Y +       P +H +   A    G   +   L       F    ++ +SL +L   +L ++A  P+G+HV ++ L++ ++ +K++  +    +G++  LA  + GSRV+DA+W      ++  I  EL +    L  D +G  V  N  +    ++ RE  E+Q     K+R+    IL
Sbjct:  184 LGLAAEVCDDFLVYCGDTHGSFVVRTLLQVLGGTILESERARPRGSQSSEA--------------QKTPAQECKPADFEVPETFLNRLQDLSSSFLKDI------AVFITDKISSFCLQVALQVLHRKLPQFCAHLCNAVIGYLSTRGSSVDGS----------------------PLLLFLRDQTSSRLLEQVLLVLEPPRLQSLFEEHLQGQLQTLAAHPIANFPLQRLLDAVTTPELLSPVFEELSPVLEAVLAQGHPGVVIALVGACRRVG--AYQAKVLQLLLEAFHCAE-PSSRQVACVPLFATLMAYEVYYGLTEEEGAVPAEHQVAMAAARALGDVTVLGSLLLQHLLHFSTPGLVLRSLGALTGPQLLSLAQSPAGSHVLDAILTSPSVTRKLRRRVLQNLKGQYVALACSRHGSRVLDAIWSGAALRARKEIAAELGEQNQELIRDPFGHHVARNVALTTFLKR-REAWEQQQGAVAKRRRALNSIL 634
The following BLAST results are available for this feature:
BLAST of TCONS_00021353 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOP92.630e-2623.14Nucleolar protein 9 OS=Homo sapiens GN=NOP9 PE=1 S... [more]
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