TCONS_00021382 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021382
Unique NameTCONS_00021382
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1602

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021382 ID=TCONS_00021382|Name=TCONS_00021382|organism=Clytia hemisphaerica|type=transcript|length=1602bp
TCAGATGTATATAAACTAAAACAAACAAGAAATAGAAACACAATAAACAG
CAGCAGTAAACCCAAATTTACACAATGATGTCTTCTTTGTTGAAAGTCGT
CCCAGTGTCAGCAGCTGTCCTTGGAACCGGTGGATtcttttacaaaactt
tttcaaGCACCTTAAAAGCAGATGAAAGCATACACGAAGAAGTTCAGAAC
TTGTTGGAAAGAAAATCAAGAGCGGCTGTGATTGGGGGAGGAATAGGGGG
TGCATCGACGTGTTATTTCCTCAGGAAGCTACTTGGCGACTCAATTGACA
TCGATGTTTATGAGAAAGATGATCGATTGGGCGGTCGATTGAATACCCTT
GATGTTAACGGACAAACTGTTGAATGCGGTGGCACCTACATTCTTAAAGG
GCACAGATACATGACTCGGAAACAAATGACGTCCTAAACGATGCGAAGAT
GAGGGTTTGGAATGGAGAATCGTTAATCAATCTCCCTTCGTCAATGTGGT
GGGTGGACCTTGTTAAAACGACGTGGCGTTATGGCCCACTTAACTTGTGG
CGTCTGGATAACACAATCGACTTTGTTGACAAGAGTTTTAAGAGAATTTA
CAATCTACAAGAGGAAGGTGTTTCATTTGAGACTGTTCCGGAGATGTTTT
CAGCAATGGACGAGACGCAACAACTGTTTGAATTCACCCAAAAATCATTT
CAACAAGTCATGCGTGAAAAGAACATTCATGACAGTGTTACCAATGAACT
GATCAACCCAATCATCCGATGGAACCTTGGTCAAGATGCAGATGATGTCA
ACGGTCTTGTTGGTTTTCTGATTGCTGGAGGAGGTAAAGACGGCCCTGTA
TGGAATTTCAAAGACGGTAACAACCAGGTCTGTCAGAAACTCTTCCAATC
ATCCAAAGCTGAAGTTCGGTATCACTCGCACGTCAAAAGTATTGACAAAT
TGGTGACCAACCAATCATCTGAAGGCTCTGGCAATCAACGCGTTCAATAT
CGTTTGCTTGGTGAAAACATTGACGCTGGTCGATCTTACGATGTGGTCAT
TGTTGCCACACCATTAGAAATTCCATCATGTTACGTAAATTGTGGCTCGT
GTCAAGCATGGCCATCACAGAGCGATTTAGGTCAATACCAGAAACGACTC
ACCAATTTTGTAGAAAGTGAACTGAACACTGAATCTTACAACGTGACACC
TGAATCCCAAGATGCACCAGATGTCATTCTAACCACCAAAGCTGACAAAG
ACAATTATGATACTGTCATACGCTTGTATCAGACGAATGGTCAAAAGACT
TTACCTGCTGTTCACAAAGTATTCTCAAGGGAATCACTCACTGAAGAGCA
AATCAAATTTATCTTTGGCGATCAAGTGAAAGATTATAAAGTAGTTTCCT
GGTTAGCGTGTCCTCGTTATacagctgaagaaaagttcatTTCTTTTAGA
CTTGACGATGGTGTTTTTAATGTGAACGCGATTGAAAGGATGAAAGTCGG
TTTGGAATTCAGCGCCATTGGTGCGCGAAATGTTGCGTTGCTGGCTTCAA
AGTATTTAAAAGAATCATGTAGtaagttttagatttttgtttCAATGATT
CA
Run BLAST on NCBI

transcript from alignment at sc0000385:404204..414631-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021382 ID=TCONS_00021382|Name=TCONS_00021382|organism=Clytia hemisphaerica|type=transcript|length=10428bp|location=Sequence derived from alignment at sc0000385:404204..414631- (Clytia hemisphaerica)
TCAGATGTATATAAACTAAAACAAACAAGAAATAGAAACACAATAAACAG
CAGCAGTAAACCCAAATTTACACAATGATGTCTTCTTTGTTGAAAGTCGT
CCCAGTGTCAGCAGCTGTCCTTGGAACCGGTGGATTCTTTTACAAAACTT
TTTCAAGCACCTTAAAAGCAGATGAAAGCATACACGAAGAAGTTCAGAAC
TTGTTGGAAAGAAAATCAAGAGCGGCTGTGATTGGGGGAGGAATAGGGGG
TGCATCGACGTGTTATTTCCTCAGGTTCGCTATGTAGGAGTAGGTCTGTA
TGATTTTTCATATCTTCAGACCTTTTTACACAATGTTTTGAATTCTCTTC
GCCCTATTTTTTACCTTCGCATCAGGGTTAGGTCAAAACAGAACGCAATG
TTTAAGTCACTATAAATATCATATATGTGTGTCCTCTTGAGTTCTTAAAT
TCTGGATGCAAAGGTTTTTTTGGCTATATATTTCCATACAGTACTGTAAA
GAGCAGATGCAGCTAAGGATCAGAAATATGGAATTAGGGGGGTCCTCAGA
TTTTGATGAAATTTGGCACATACGTGAGGAACCTTGAGCTGATCACATCC
AGAAAATTTCAGCGCTCTACAATCCTGGCCAAAATATATTGAGAATTTAG
CCTATTTCCTCGTTTTTCAAAATTTGGAATTCGGGCGAGAAAGTCGTTTT
TGGGCTAATTGATAAATTTATCCGAGTATTTCGATTTGGGTGGGGTTAAT
TGACTTCCAGGCTATATTCTGAGCCCTGTTGGACCATTCTGGGACTTTTG
GATCCTCAGATTCTAAGGTCGTAAGTCTTAAGTCTAATGTTAAAACTCAG
AGTTAAAACTCTATTCGTCTAACCTAATTTAGAGCGCTTCCAAAATACTT
GTGGTTATAAGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGAAGAAAAAGTTTGAAGAAGCACTATCAAAATTTTTTTGATCATT
TGAAATATAAAAGTGGCTGTAATGGTTTTAGATCAATTTTGATAAAATAT
GTTTCAAACTATTCTAAAAATAATTTAAAATTCTACTGGGTGACCCCAAA
AAAGTGTAAATAGGAAAGGTAAAATTAATTTCAGCATACATTATTTTAAA
ATTTGGTTCAGTACTTCTCTAGGTTTTTCTTGAAGTCAAAATTCACTTTT
TTTGGGTCACCCTGTAGATGGCACAATCTAANGAAAAATTTTTTCGAGAC
CACTGATGTTCCTCCATTATGGATTTTCATTTTGAAAATTCTAAAATCTT
TGCGCAACTCGTGCCCAATTTCCCAAAAAAGGGGTTGTCAGAATTTTGAG
TGTCATATATCATTTGAAAGCTCAGACTGTCTTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTTGAGTTGCTTTGTTGGT
GAGAGATTAAATGAAGAATGTGGTTTGACTTGGTTTGGATCTAATGATAG
TAATTCTCTTCCTGTAAACTTTGGTGAGTGTCGTCAAGATCCCACCACCC
ATCTTTCATCATTGGGATTCTCAGATGAAACAATCTTTCACTACCCAAAC
ACCAATGAACAATGGCTTATCATGCATCGTCTTCAATTTACAATCCCAGA
TGAGGCGCTAATATGCCCAAAGCACCGATTAAAATNTTTATGTGTCTTTG
AGCATCAACAGATGTAAACACCCTTCAAGTAATCATCAAGGTAATTTTTT
TTCTATTTTCCACCTGAATTAGCAAATTTTAGACAGTCCTAGGCAACCAA
AGAGGTAATTTATTGTTTTATTATTTTATTTACCTATTTCATCTTTTTCC
TTGGTAAAAAAGTGAAAAAAGGAGGAAAAGTATACTGAAGTATCANGAAG
AAATCAAAATTGAAAGCAAAGAATATGTGCAAAATACCAATTTCAGCAGC
AGCACAGTGCCACCTCCTCTTTTCTAGTGCTGGTGAGAAAACAGTTATTC
AAGTTGGTTCCAAATGGTGCAGTAGTTGTCGAGTCAAATGCCATCCCTCT
TTAATGGAACAAAACAAAATAGACCTAGGTCATAGGTGTTGTCTATGTCT
TGAAATGCATGACACAAATGAGATGGATGTTTCCTTAATCTCAATGGATG
ACAATCAGCCTGACCACCTAAATGCATCTATTGTTTCAACAGAACCAGAA
CCTTCTGACAGTGATTATGAACCTGAGCCTCAATATTCCGAAAAAGAAAT
CTTCAATCGATCCATGACTAGCATGTCAAGTGAATTGGAGCCATTGACAT
TTCAACTACATAAAGACTTTGATGACTTGGATGAAAAGAACCAGAAAATG
CTTGTCAGAAAAAGTTTATCAGCCATTGACACCGTGTTTGAATCAATTGC
ACCAGGCCAAGCAGAAAAATTGAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAGCCAAACGCAATGATTGAAGAGAACA
CACAACTGACCAAAGTCAACAATCGATGAAAAACGAAAACAATCACATAG
ATATTATTTCATTAGCCATTCTTCTATACATTGCTCAAAGACACATAAGA
AATGTTCCTATGAATGAATCAGAGCATTTGAATTAATATTTACCTTGGCT
ACTAAGGAATTCATACACGGTTGCTAGGGAAATTTTGAATTTTTCGGTAA
AAAAGTGACCCCACTTCAAATCAAATTTTCTTTAGTTAGGATGAGAGTTC
CATCCTAATTCTTTTTTGTCTTGAAAGAAGACAGTCTGAGCTTTCAAATG
ATATATGACACTCAAAATTCTGACAACCCCTTTTTTAGGAAATTGGGCAC
GAGTTGCGCAAAGATTTTAGAATTTTCAAAACGAAAATCCATAATGGCGG
AATATCAGTGGTCTCAAAAATTTTTTTTTTTGACTTTACCTGAAAGTAAT
CCATAAGTTCTTCATGTGTGCAAAATTTCAGCTCAATTGGATAAATATTG
AAGGAGTTATAGCAATTTTAATTCTGGTCTGTAAATTACCGGTCAGTAAA
ATAGACTTTTACAAATTTAGGCATAACTTTCGAACCGCTGGTGCTAGAAC
GCTGAAATTTTCTGGATGTGATCAACTCAAGGTTCCTCACATGTGTGCCA
AATTTCATCAAAATCTGAGGACCCGCCTAATTCCACTTTATATGGAGGCC
TTCTGAATCTTAGGTGCATCTGCTCTAAATTATAATTCCTCATAAATTTC
TTTATCCCTAGGAAGCTACTTGGCGACTCAATTGACATCGATGTTTATGA
GAAAGATGATCGATTGGGCGGTCGATTGAATACCCTTGATGTTAACGGAC
AAACTGTTGAATGCGGTGGCACCTACATTCTTAAAGGGCACAGATACATG
GTACAATTCGCTGAAGATACAGGTTATTTATTGGGCTATTCAATCCTCCA
ATGTTGTGTGTTGAGGAGCTCAGGTTTTCTTTTTAGGGGAATGTCCCCAA
AAACCTGAGAAATTAAGGAGGTTCAATAAAATTTTGTGAAAAGTTCATGG
GAGTCTTTTGAAAACAGATAAAAATCAACGTCAGGTCTGTTAATCTGTAG
CATAATTTACGGGAAAACAATATGATCTAGCTGAAACTTTCTCCAGACCT
TCTCTATAGGATGGTTATTCCTCAGGAAAAATTCCCCTAAAATCCCACTG
GTGGAACATCCCTTTTTTGGGATATTTCTTTTTTCCCCAGGCAAAATCCT
AAGGGCGAAATTTTTTGAAAATTTCAAACTCATTTTCAGACATTATCAAG
TATACCATTCGAAAGCTCTCGAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAATGTCCCAAAAAAGGATGTTCCACCAGTGGGATTTTAGGGGAATTTTT
CCTGAGGTATAAGCATCCTATAGAGAAGGTCTGGAGAAAGTTTCAGCTAG
ATTTTATTTTTTTCCTACAAATAGCCTGTATTTTTGTAACACGACCACAC
TATAAGTTTCGAAGAATGCCCAAGGTGTTACCTAGAAGATTTACCATCAT
ATATTTTGAAGGAAAAACATTTATCCCTGAAAAATTTTGCTAAAAAAAGA
AGAGCCGATACCAATCTATTTGTTACTGGTGGCTTTATGATGTTCATTTA
GTGGAGTCTCCATAACTCGAACACGAAAGAAGGAAACAGATTTGTCCGAG
TTGAGGAATTTTCGAGTTATGGAGTATGCTTTATAAGGCATTGTTAACTG
AAAAAACTACAAAACTTGTTCGTGTTAAAGAGATTTCGAGTTATAGAGGT
TCGAGTTAAAGTAGGCTTCACGCGTCCTCTCTGATATGTTTTGATATAGG
GGATGTGTACGTATCGTGTATAAAATTCCCGTTAAAGAGAAAATATTTAT
ACAGTGTGTCCCAATAAAGCGGACAAATATTTACACACTGTATATTACAG
ACTCGGAAACAAATGACGTCCTAAACGATGCGAAGATGAGGGTTTGGAAT
GGAGAATCGTTAATCAATCTCCCTTCGTCAATGTGGTGGGTGGACCTTGT
TAAAACGACGTGGCGTTATGGCCCACTTAACTTGTGGCGTCTGGATAACA
CAATCGACTTTGTTGACAAGAGTTTTAAGAGAATTTACAATCTACAAGAG
GAAGGTGTTTCATTTGAGTACGTACGATGTATGGTTTGTTTTTTAAATAC
AATTTTCCTTTTTTCGCTAGGAATAATGAGTTTTTCTAAACGATTTTACG
ATTTCAGAATTTAATTGGGCTCTTCCAGAAAATTTCCGTACATGCGGATT
GGAGGATATAGTGTCCGGGGAGGTAGTGAAAAATCTACAAAATTTTCCCA
GTCTGGGGGTGAATTCTGGTGAATTTGTTCTGTTTGGGAGTAATTTTGCT
CGGTTTGAGGGTTATTTTGAATGTCCAGTGGGTCAACTGATGCTTGCCAA
AGAGAAACGGAACCGTAACGTCTGAACATTGTCTAACTAACCAATCATAG
GACTGTTCCGGAGATGTTTTCAGCAATGGACGAGACGCAACAACTGTTTG
AATTCACCCAAAAATCATTTCAACAAGTCATGCGTGAAAAGAACATTCAT
GACAGTGTTACCAATGAACTGATCAACCCAATCATCCGATGGAACCTTGG
TCAAGATGCAGATGATGTCAACGGTCTTGTTGGTAGGTAGATAGATTTTC
TTGAGAAAGAGATATCCTGGCATACCGTATGTTGGTCTATTGTCGACACC
CCTCTTCTAATTTCGACACCCTTCTTTATAGAGATTTAGAATCGCCGATT
AAAAAAAACTACTTTTCTCCGCTTAGCAATAAGAGAGGAAAAAAATCTTT
TGTTTGTCAGTAATTCAGACCTTTCTATTTTTCATATCCCTAAAGAAGGG
TGTCGAATTTAGAAGAGGGATGTCGACATTAGATCAACGTACGGTAATTC
ATATTGATATTCAAAACCAATGGAAATGATAAATGTAGGAATGGTAAAGG
CCAGGGCAAACCAGTCCAAAAATTCATCCAACATTATTTTCCATTACATG
AAAAACTTTTAGCTTTCGAGTCTTTGATCTTGCCGCAAGTAAAATGTTTT
ATACTTCCTCGCACCAAGGTTTTCTGATTGCTGGAGGAGGTAAAGACGGC
CCTGTATGGAATTTCAAAGACGGTAACAACCAGGTCTGTCAGAAACTCTT
CCAATCATCCAAAGCTGAAGTTCGGTATCACTCGCACGTCAAAAGTATTG
ACAAATTGGTGACCAACCAATCATCTGAAGGCTCTGGCAATCAACGCGTT
CAATATCGTTTGCTTGGTGAAAACATTGACGCTGGTCGATCTTACGATGT
GGTCATTGTTGCCACACCATTAGAAATTCCATCATGTTACGTAAATTGTG
GCTCGTGTCAAGGTAAGTTTCATCTATTTCTTTTATGGTGATGGTTTGAC
ATTAAGTTTTCCATTCTTAAGGATAAAACTAGAAAATCCAGTAATAGACC
TGTCAAATTACAAAAAATATGAACATAGATTGCACCCCTCCCTTTTTAAT
AGGGGGATGCCAAATTTTTTGGGGCCTTTGTAGGGGGTACTAAGATTTGC
CTAAAAAGCTAGGGGGGTCAAATAAGAAAGGGGGTTGGAAATGTTGATCA
ACTCAATTATGTATATACAAATGGTCACAGTTTGTTTTCAAGTAAAAATA
TTGTACCATCAAAACACAAAAGTATATCATTTTTTTCAGACAGGGAAAAA
CACCATCATACATTTACAGGATCTTTCGCTCATTTCTTTGAGCATTATCT
AGTCTAAAAAGCAGAAAAATTAACAGATTAGTCAAATAAATCAAGAAAAT
CAAAAAATAACAAACTAGAAATTCACTATGCCCTCTTCCACAAAAACATG
ATATTAGTATATTTAGGTATAAAGTATATCATGTTATTAAAAAACGACTC
TTGACTGTATACATTTTGTATTCTTTGATCACTTTGGTAGCGCATAGAAC
GAGTTCAGAATTTCTGCAGAAAAGGGAGGATAAGGTTTCATTACAGAAGG
GGGGATGAAATAAAACTAGGGTGGTTCATACCCCTCTGCAAACTATGAAG
AAAATTGAATTGATGGAATTTCTTTCAGGAAAGTAAAGGCTGAGATGATT
TATATTTAGGTGTTTCATGTATTATACCTTGGCCGATGGCACAAAAATGT
TTTCTTCTGAAATCTTCTATACTAACAGCCAATTCGATTGACTTCCAAAT
TTGCCATAATCACCAACTTTGCCAAATCTACAATTTCAATGTCAAAAGAT
CACAGCTTCATGGCAAATTTGTACATCGCTAAGCCGCCATTATGATTTCC
GTTTTGTGATGCTTAGTCAGCAGTTTTCTGTCGGCGTTTGTAAAGCAAAC
GATTTTTTAACCAATCAAATTGCCGATCGGCATTGTTTTGCTTTAGCATT
GGAAGGTCTTCTATTTTTCAAAATCTTTGGCAAAAGTGGCAAAATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
CGATACAAAAAGTCTCGCGCTAAGTTTGACAAGCGTAGAAAACTCGGATT
AGAGAAGACTCTACACTGCTATTTGTAAACGAAAAACGTTCTGACGTCAA
TTTCATGAAAATGTACTGCGACGTCACAAAGTTTCAAATAAAAAGGTGTG
GCATTTTTGTTGCACGATTTCGAATTATTTTATATCAGCACACGCAACAA
AATCCAACATTGTTGTTTGATGATTAAACTTCGTCTAACATTATTTAAAA
AGGTTTCAATGTTGGTTGCATTGCATATGCGCCGGTCTTAAGCTGTCCGC
ATATGAAGCCAACAAACGGGAAAACCTTCAGTGCTCAATCGCAAAGCGCG
AGCCTCTCCTTCACAACTAATGCTTTTTCTTTCCTAGAAGCAACTCTCTC
ACCACCTCAGACACCTTTGGGCGTCTGCAACGACGGGTACCCTCGATAAT
TTTGACAGGGTCACTATGGCATTTTATTGAACACAAACTTCCTTTATCTT
AAAAAGACATATCATCGAGGCTTATACAGACACAAAATTTTGACTAATGT
AGAAAGTTTAGAAGTATAATTTTTATTATTGTATTCGGCATTTTAAGCCA
AAACGATGTCACGCATTAACCCACATTATAGTATTTTAAAGGCTTTTGAT
GTGCAAGCAAAACCGTTAACCGGCGTTTGCGACGACGGGAACTGTCTAGT
TGTCTCTAAAACAATTTTCGTTGATTTTTAAGCATGGCCATCACAGAGCG
ATTTAGGTCAATACCAGAAACGACTCACCAATTTTGTAGAAAGTGAACTG
AACACTGAATCTTACAACGTGACACCTGAATCCCAAGATGCACCAGATGT
CATTCTAACCACCAAAGCTGACAAAGACAATTATGATACTGTCATACGCT
TGTATCAGACGAATGGTCAAAAGACTTTACCTGCTGTTCACAAAGTATTC
TCAAGGGAATCACTCACTGAAGAGCAAATCAAATTTATCTTTGGCGATCA
AGTGAAAGATTATAAAGTAGTTTCCTGGTTAGCGTGTCCTCGTTATACAG
CTGAAGAAAAGTTCATTTCTTTTAGACTTGACGATGGTGTTTTTAATGTG
AACGCGATTGAAAGGATGAAAGTCGGTTTGGAATTCAGCGCCATTGGTGC
GCGAAATGTTGCGTTGCTGGCTTCAAAGTATTTAAAAGAATCATGTAGTA
AGTTTTAGATTTTTGTTTCAATGATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011971XLOC_011971Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021382-exon-sc0000385-1575043694:414358..414631TCONS_00021382-exon-sc0000385-1575043694:414358..414631Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1575043694:410332..410470TCONS_00021382-exon-sc0000385-1575043694:410332..410470Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1575043694:408215..408431TCONS_00021382-exon-sc0000385-1575043694:408215..408431Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1575043694:407700..407881TCONS_00021382-exon-sc0000385-1575043694:407700..407881Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1575043694:406970..407263TCONS_00021382-exon-sc0000385-1575043694:406970..407263Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1575043694:404204..404699TCONS_00021382-exon-sc0000385-1575043694:404204..404699Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1510915933:414358..414631TCONS_00021382-exon-sc0000385-1510915933:414358..414631Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1510915933:410332..410470TCONS_00021382-exon-sc0000385-1510915933:410332..410470Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1510915933:408215..408431TCONS_00021382-exon-sc0000385-1510915933:408215..408431Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1510915933:407700..407881TCONS_00021382-exon-sc0000385-1510915933:407700..407881Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1510915933:406970..407263TCONS_00021382-exon-sc0000385-1510915933:406970..407263Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1510915933:404204..404699TCONS_00021382-exon-sc0000385-1510915933:404204..404699Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1491911889:414358..414631TCONS_00021382-exon-sc0000385-1491911889:414358..414631Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1491911889:410332..410470TCONS_00021382-exon-sc0000385-1491911889:410332..410470Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1491911889:408215..408431TCONS_00021382-exon-sc0000385-1491911889:408215..408431Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1491911889:407700..407881TCONS_00021382-exon-sc0000385-1491911889:407700..407881Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1491911889:406970..407263TCONS_00021382-exon-sc0000385-1491911889:406970..407263Clytia hemisphaericaexon
TCONS_00021382-exon-sc0000385-1491911889:404204..404699TCONS_00021382-exon-sc0000385-1491911889:404204..404699Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:404204..414631 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.93353	0	0	0.755957	1.07916	0	0.814122	2.03803	3.66914	1.44582	1.37313	1.32227	1.93858	1.27585	0.588657	0.803257	0	6.61941e-05	0	0	0	0	0	0	0.602946	0	6.88749e-10	3.23485e-10	0
Blast
[Close]
BLAST of TCONS_00021382 vs. Swiss-Prot (Human)
Match: PCYOX (Prenylcysteine oxidase 1 OS=Homo sapiens GN=PCYOX1 PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.533e-40
Identity = 114/377 (30.24%), Postives = 183/377 (48.54%), Query Frame = 2 
Query:  449 MRVWNGESLINLPSSMWWVDLVKTTWRYGPLNLWRLDNTIDFVDKSFKRIYNLQEEGVSFETVPEMFSAMDETQQLFEFTQKSFQQVMREKNIHDSVTNELINPIIRWNLGQDADDVNGLVGFLIAGGGKDGPVWNFKDGNNQVCQKLFQSSKAEVRYHSHVKSIDKLVTNQSSEGSGNQRVQYRLLGENIDAGRS--YDVVIVATPLEIPSCYVNCGSCQAWPSQSDLGQY-QKRLTNFVESELNTESYNVTPESQDAPDVILTTKADKDNYDTVIRLYQTNGQKTLPA-------VHKVFSRESLTEEQIKFIFGDQVKDYKVVS-WLACPRYTAEEKFISFRLDDGVFNVNAIERMKVGLEFSAIGARNVALLA 1546
            + ++NGE+L+   S+ + ++++K  WRYG  +L R+   ++ V   F RIY  Q    +F +V ++  A+           ++  + +++    +   NE+I P++R N GQ + D+N  VG  ++    D  +W  + GN  VC  L Q+SK+ +   S +   +K  T  +   +    V Y++  E     RS  YD+V+VATPL       N       P   +  QY Q  +T  V+ ELNT  ++  P  +   + +LTT  + D +   I +  +  +K  P        V K+FS+E+LT+ QI  +F     DY V   WLA P Y   EK  S  L D ++ +N IE     +E SAI A N ALLA
Sbjct:  118 LGIYNGETLVFEESNWFIINVIKLVWRYGFQSL-RMHMWVEDVLDKFMRIYRYQSHDYAFSSVEKLLHALG-GDDFLGMLNRTLLETLQKAGFSEKFLNEMIAPVMRVNYGQ-STDINAFVG-AVSLSCSDSGLWAVEGGNKLVCSGLLQASKSNLISGSVMYIEEKTKTKYTGNPTKMYEVVYQIGTET----RSDFYDIVLVATPLNRKMS--NITFLNFDPPIEEFHQYYQHIVTTLVKGELNTSIFSSRPIDKFGLNTVLTTD-NSDLFINSIGIVPSVREKEDPEPSTDGTYVWKIFSQETLTKAQILKLFLSY--DYAVKKPWLAYPHYKPPEKCPSIILHDRLYYLNGIECAASAMEMSAIAAHNAALLA 481

HSP 2 Score: 46.2098 bits (108), Expect = 1.533e-40
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 3 
Query:  255 STCYFLRKLLGDSIDIDVYEKDDRLGGRLNTLDVNGQTVECGGTYILKGHRYMTR 419
            S  Y+LR+  G  + ID++E+++ +GGRL T+ V GQ  E GG+ I   + +M R
Sbjct:   48 SAAYYLRQKFGKDVKIDLFEREE-VGGRLATMMVQGQEYEAGGSVIHPLNLHMKR 101
The following BLAST results are available for this feature:
BLAST of TCONS_00021382 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCYOX1.533e-4030.24Prenylcysteine oxidase 1 OS=Homo sapiens GN=PCYOX1... [more]
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