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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021385 ID=TCONS_00021385|Name=TCONS_00021385|organism=Clytia hemisphaerica|type=transcript|length=2035bp TGTTCCAGTGCAGTTTTGATTGTTGGTTGAATAAAATTATCATCCCATTT TATATATAAACTTGTCCTCTTATCTCTAGTACCAAGgTATAATTGTCAGG AATGACAGTCAGAAGTATTGTGAAGATCTCTTTGACAGCTTCTGTAACTT TAGTTACAGGAAGTTATCTGTTTGAAGCGACAAACAAGGTCATTGCAGAA GAGAATACTGAGCACATAGATTCATCAGCCAGTAAAACATCCAACAATTT CGAGATCAATGGCAAAATTGCAGTCATTGGAACTGGCATAGGTGGAGCAT CAGCAACGCACTTTCTAAGAAAGCTACTTGGAAATGAAGTGCAAATTGAt gtatttgagaaaaatgatCACCTTGGTGGTCGTATGCATGCTATTGATGT GAATGGGGAACAGATAGAATCTGGTGGCACTATTATTCATTCATCAAATC GATACATGGTAGACTTTGCCAAAGACTTAGAGATGGATACAAACATAGCA ACCGATGATGCAAAGCTTGGCATCTACAATGGGAAAGAATTTGTCTTTCT CCAAAGCTCATGGAAATGGCTGAATGTTGCCAAACTGATATGGCGTTATG GACCGTTCTCTCTGAGAAATATGGATAGCGCTTTGACGAGAATGCTGAAC GACTTTGTCAAGATTTACGATATTCAAGAGAGTGAACAAGCTTTCAGaaC AGTCCCTGAGATGCTTAATGCCTTGGGCGGTGATCATTTTGTGGAATTGA CTAAGAATACAAGTACACAAGCGTTGAAAGATGAAGGTGTAGGGGACACT TTGATTCAAGAACTGATCACAGGAATATCCAGATGCAATTACGGACAGTC CACTGATGACGTGAACGGTTTTACAGGTTTTGTTTCTTTGGCTGGTGCTC AAGAAGGTGCTTTATGGAATGTGAAAGATGGTAATTATAAGGTCCCGCAA TCACTGATAGAAAACTCTAAAGCTAACATTCGTACGAATACAAAAATCAC CTCTATTAAAAGATACGAGAGAGACAATAAAGTGAAATATGAACTCGAGG GAGCaccaaaaaatgaattttacgaTGCAATCATTGTCGCAGCGCCTTTA GAAGTTCCTTCTTGTTTTCTGGACTGTACCAAATGCAAGAATTGGCCTTG TAAAGAAGAATTACAGAAATACCAAAAGACAATCGCAACTTTCATACAAA TGCCTTTGAACCATGAGTATTTTGGTGTCAAATGCAAAGAAGACATGGCA GACGTTGTTATTACAACCGATTCTAAGGAAAATGCTTTTTCAACAGTTGC CCCACAAAAGACTGTCAAGGGAGTGGTCACAGAACCACCTGTATATAAAA TCTTCTCCCGAGAGCCTTTATCGGATGCGTTGGTCAAAAAGATGTTTATC GTCAATTCtgataatgaaaataaaacatcaTCTGACCGAACTGTTGTCAG TTGGCTAGCCTATCCACATTATTCTCCACCTGAGAAGTTTTTACCGTTCG AATTGGACGAAGGAGTGTTTTATGTGAATGCAATTGAACGAGCAGCTTCG GCAATGGAAATGAGTGCTATTGGTGGACGCAATGCTGCTTTGTTAGCTTA TCATTATCTGAAAGGTGCACCAAAGAAATAAGTTTTATTGTCTTCTTCAT CTGTATAAAGGCTGGTTGGTTCCACTTGCGCGCGTtgtgatcgcactttt tcgtgcaaagcttccacgctatttgTTAAAAGAACAATGAAACATTCCAT TGGCGTGATCCGGCGTaatggttgaaaaaagtttaaaaaagtttaaaatg tattcaacttttttttcgagcaagcgctacatttttaagatcgatgagct ggagtttttataagatacttcactaattggtcatttgaagtaatagagat gacgcgttctttagaaaaagtaataaaatgtttttattatatcttAACGA CCATGCAAATCacataaaagcttgtaaaaactccagcttgtcccatttTT AAGAcgagcaaaaaggattgaagccaaaaaggtGC Run BLAST on NCBI protein sequence of TCONS_00021385-protein >TCONS_00021385-protein ID=TCONS_00021385-protein|Name=TCONS_00021385-protein|organism=Clytia hemisphaerica|type=polypeptide|length=509bp
MTVRSIVKISLTASVTLVTGSYLFEATNKVIAEENTEHIDSSASKTSNNF EINGKIAVIGTGIGGASATHFLRKLLGNEVQIDVFEKNDHLGGRMHAIDV NGEQIESGGTIIHSSNRYMVDFAKDLEMDTNIATDDAKLGIYNGKEFVFL QSSWKWLNVAKLIWRYGPFSLRNMDSALTRMLNDFVKIYDIQESEQAFRT VPEMLNALGGDHFVELTKNTSTQALKDEGVGDTLIQELITGISRCNYGQS TDDVNGFTGFVSLAGAQEGALWNVKDGNYKVPQSLIENSKANIRTNTKIT SIKRYERDNKVKYELEGAPKNEFYDAIIVAAPLEVPSCFLDCTKCKNWPC KEELQKYQKTIATFIQMPLNHEYFGVKCKEDMADVVITTDSKENAFSTVA PQKTVKGVVTEPPVYKIFSREPLSDALVKKMFIVNSDNENKTSSDRTVVS WLAYPHYSPPEKFLPFELDEGVFYVNAIERAASAMEMSAIGGRNAALLAY HYLKGAPKK Run BLAST on NCBI transcript from alignment at sc0000385:416252..424381- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021385 ID=TCONS_00021385|Name=TCONS_00021385|organism=Clytia hemisphaerica|type=transcript|length=8130bp|location=Sequence derived from alignment at sc0000385:416252..424381- (Clytia hemisphaerica) TGTTCCAGTGCAGTTTTGATTGTTGGTTGAATAAAATTATCATCCCATTT
TATATATAAACTTGTCCTCTTATCTCTAGTACCAAGGTAAGTATTTTCCC
TTCTATTTATTAGAAGGCACTTATAAAAAGTCTGCAACACTTGCAACACA
TGATAATTTTTTTGCTCAGAGACATGCTCAGACACAGCCCACAGCTCCTT
TGTTAAAAGCCTCGTAAGATCTTGCTTGCTGCTTGCACTTTTGCTTGCTT
GTAATTGGAAAGGTAGATGTATCATCATATACCACAACAAGTATAGAAAA
GAAGGGAAGTTTGTTTCAGTTAGATTTTTTGACATCCAATTGTATCAAAT
TAACATCCAATGGTGTGGCGTTGATGGAAAAGTGAAAATGTCTATCATCA
CACCACATATTACCTATACAGACAAAAGGTTGGCAAACGATATCATTCAC
CAGGCAGTCTAGACTAAAACTCCCATATCAGGATTATTAGAGCAGACTAG
GCTAGAATTCCCTCTTCAAGGCAATGCTTATTACAAAGTTGACACAACAT
TAATCCATGTAAGAAGTTTATATCGCTGAAATCTGCAACAAAAACATAAG
TGGTCTCTTCTACTTCTACGGATTGCTTGGCAGTGTTCCTTTGCAGACTG
TTTATCACATTTCCACCAATGATATTGCAGCATTTCACACGACTCTGCTT
TTTGGTGGTCCCTCTGACCTTTCAGTGCCTTGCACACTTTGCACAATGGG
CAAGTGTAAAATGTCAAGAAATGGGAGATTTGGAAAATTTTCTAAGTTTG
ATTTTTTTGCATAAAGCTCTATATAACTAACTGTAACCCCTGAGGCGCTG
TGGTATAGTGGTCATTGACCTTGGCAGTTAGTCACACTAGCGTCCCACCA
AAATGAGTATCAAAGATTAATGCTGCGAAAACGCTATATCGTTTACTTGA
CTCTCAAGCAAAAAAATGCGCCGCAAAACTTCTAAAGGGATTCATGAAAA
AATAACCCGGCGCTTTTTGATGAAATTAACATTTTCAAAAACTTTGAGAA
ATTGCCTAAAATTTGAGCCATAGATGAAAAAATTAGAGCCAAGCCAACCT
TGAAAACTAATTTGAAGATCAACTTCCCAAGAAAAAGATCTACGGGGGAG
GAGGAATCCACCTAGATCCGCGCACCGCCGGATAGGCTATCTCCCGGAAA
TTTTGCCGGACCTCAAACAATGACCCAATGCGGAATTGTTTTTACTTTAG
CGTATAAACAAGGCCTTAAAAATCGAAGGGCTGTCTCGGGAATTGAATGA
CAAATTTTGGTTGGTTGATTTTGGCTGCTGCACGTTTTATTTTGTTTCCA
ACTTTCAAGTTTTAATTAATATTGTCTTGCGAACTTGATTCAGGTAACTC
TCATCCTTGTTGTTGAAATTTATCCTGTAGATGACTGATGTTGTTTTTTT
CTGAAAGCTTAATTTCCTAGTGTGACTAACTGCTTGGTTGCTGAACAGGC
GACTGAGGTTGTTGTTTCGTGTGTTGTGTAAAACTGCTTATAATTTGGCT
GTTTTTTTAATTGAAAGGATTGCAATGTTTACTGAACTTCTAGTTTGATG
GATGAACTTGTTCGATAAGAATGATACCAAGAATTTCATTCAAGGTTTGT
TTTGATTATTTTACAGATCCGGTGTCGAGATTGCAAGACCTATGTCGAGA
TTAGACGACTCTACGGTAGTCAGTCCAAGGTGCTGACGGGGCGCTCATTG
AAAGCGTCTATAGTTGTGAAAATAGGCCTCAAAGCCGCTGCAACTCAACC
AAATAGAAATAGAAATAGAAACCATGTTGGCTTGAAATAGAAAATGAATC
CACTGAAAACGAAAGTAAAATCGGCTAACACTCCAAATCTCGTAATCTTG
ATATGATAGGAGTTTTAGTCAGTTAGTCTAAACTGCCATGCAAGTGAAAC
TTTTCAATCTGCGGAATTAGATGGAGGTTCGGTTATTATCAGTTAGGGTT
AGGATGAGGGTTAGGGTTGGAGCTCGAGAGTCACAATATATAGCCAAAGG
CCTTCTTAGGGGCAACCGTACCCTGAGACTTAACTTATGATCCCGCAGGT
ATTACTTTAGAGTTCTGCCAAATTCCTTTTCCAGTTCTGCCAAATTACTA
AATTTTTTCTAAGTATATGGTGTTTCCAATCAGATCTCAAAAAGCTTGCA
TTCAAGATCTGTCTTTTTAGCATGTCAGACATATTCAAAGAACATAAAAC
TTACTTGCTAACCACTAGTATGGTATTTATCACACACTTATAGTTACTTG
TATCAAATTAAATGTTATCTTGACATTCTTGCTGTCTTGTTAAATGCTTT
GTTTTCTTCAGAGTTTATATCATTCATTTTGGAGAGGCCGGCCAGAGAGG
GGACTTTGTGAACATTGGATTTTTTTCCCTTTTGCAGTTATCTGGAACAT
TAGAGTTTATTAAAATTGTAGGATTTAGGACCTCTCAGGATAATATTTAC
ATGAAACTTACATGCATAATTGTTTTTTTGTTTAAAGTGTAATCTTGTGA
TTTAATTTTCAGTTTTTCTTTTTAAAATACTCATATGCTGAAAATTGTCT
CCAAGCAACTAAATAGTATCTGAAAATAGGCAGGTAATTGACCTAAATTT
ACCAAAAGGCTGTCAGGCCATATTTTAGGCAGGGCAGAACAGCGTCCCTT
GGTGGCCAAAAAGGGCACTTTTTGTAGTGTTTTACCGAAAAAAAACCGAA
TTTTTAGTGATTTCAGGAAGGGCAGCGTCTGATAAGCGGCTGCTAAAAGG
GCATGAAAAATGGTCGGCTGCTAAAGGTCCGGACAATTAAAAAGTTGGCA
TTTTCAAAGAATCTATTTCAATAATTGGATCAGTCCCAGACCAGCCTCGA
TTGTCTGGTCGAAATTCCTTAAAAAATGTTGTTTTAATTTCATTCTTACT
GACAACCACATGGGCCAGCAAAATAAGCAGCCCGGACTGGTGAAACAAGT
CGCCCAGACCCTCTGACGGTCAGGACCAGACAAAAGCTACTATGACTGTA
GTCAGGTAGAATTGCATAACTACCCAGACACCATGGTTAAAAGCTGCTAT
AACTGGTGGAAATTTTTACATGGTTTTTTGCAGGTTCGAAACAAAACTTG
ACCTTGACAAGGCCTGTCTTGGACAAGTCCTGAAAAAGACACTTCCCAAA
ATATCTATTTAAAGAACCAAACAAATTTCTCAGGTATTTTAAATACACCC
CTGTCTCAGTGCCCCGGTGGCCTGATTTCAGTACATGATTTTTTTCAGTA
CATGGTTTCAGTACATGATTTTTTCCTACGTCACTGCAGTAATCAAATTT
TTATTGCACTCATTTGTGAATTGAGATATAAATTGAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTCTTGAATTCCCAAGCCATTTAGGATGATTA
CAAATGAGTGCAATAAAAATTTGATTACTGCAGTGACGTAGGANAAAAAA
TCATGTACTGAAACCATGTACTGAAAAAAATCATGTACTGAAATCAGGCC
ACCGGGGCACTGAGACAGGGGTGTTTAAATTGCCTGGATGCTCACATAAA
TCAATAATTCATGGTTTAAATAAAACATTTTTTTCCAGGTATAATTGTCA
GGAATGACAGTCAGAAGTATTGTGAAGATCTCTTTGACAGCTTCTGTAAC
TTTAGTTACAGGAAGTTATCTGTTTGAAGCGACAAACAAGGTCATTGCAG
AAGAGAATACTGAGCACATAGATTCATCAGCCAGTAAAACATCCAACAAT
TTCGAGATCAATGGCAAAATTGCAGTCATTGGAACTGGCATAGGTGGAGC
ATCAGCAACGCACTTTCTAAGGTATTTCATTCTGTTTCTAAGAAGCTATA
TTTTGAACAGATTAATTTTGACAAGAGATTTAATTTCATGAATAAAAAAA
TTTGTTTAATTTTTTAATTTGTTTAATTTTTAGTTTTGCCAATCAGCATT
TTGAAAAATTTCATGTTTATTAAATTTGGTTTAAATAACCAAAAATCAAT
CTGGAGTGGCCCTGGAAACGAAGTTTTTTTGTCTCAAATAGTAAATTTAC
AGGGTCAGGATCATATTATTTACCTTACCCCAATTAATAACATGAAAGAG
TAATGTGACTTGATAGCAAGTGACACAGTAGTTATTTTTTTATATTATGA
ATAGATAACCCAACAAATGCAATCTGGATTATGGATTTAGATTGGTCATG
CAAGTATCCATAAGCAACATTTATGTTACTACTTAACAATTCTTGCCCTT
TGCACCGACATTTCTGACTGCTTCTGAAACCCGGTATTATTGGTGGGGTT
GTAATTGTGCTTTTATCAATGATTGATTATCTTTTAGAAAGCTACTTGGA
AATGAAGTGCAAATTGATGTATTTGAGAAAAATGATCACCTTGGTGGTCG
TATGCATGCTATTGATGTGAATGGGGAACAGATAGAATCTGGTGGCACTA
TTATTCATTCATCAAATCGATACATGGTAGACTTTGCCAAAGACTTAGGT
GAGATTATGTTTGTCACAAGATAGAGCCTGTTTGTTCTTGCCATTGTTCT
TCCATCTGGAAGGTCGTTAAAATGGGGACGTCCCTATTTGTTTTGACTCT
TTCAGATGGAGCTTAATGATTCCATCTGATTTCCAGCTGGGGGGGGGGGG
GGGGGTATCAAACAAAATTAAGATTGGCCGGTTTGGGAAACTAACTATGG
AAACTATGGACAAAGAAGCCAGCTTCTTGGAGTTTGAGTTGTGAGATCAA
CTCTTAAACCTTACATCTTTTCTATTTTTTTGCCAACAAATAGCAAATTT
AATGTTGGTCAAATTGTTACCAGAATTTGCTGACACAGCAAAAATGAATA
GTTGTAATATATCATCCTAAAACTTTATTTAACAAATCTTCCTTGACAAG
AAGATTAGTTGGTTAAACCCTACCAAGTACCATGTACAAAGTTGCCACTC
TGGCAATTTTTATAGTTCAAAATTAGTACAAACCTCCCTCTGATATTTTC
AAAGCTTAAAAAGTTAATAGTTTTTTTCAACCTTTCATTCCCAGAGATGG
ATACAAACATAGCAACCGATGATGCAAAGCTTGGCATCTACAATGGGAAA
GAATTTGTCTTTCTCCAAAGCTCATGGAAATGGCTGAATGTTGCCAAACT
GATATGGCGTTATGGACCGTTCTCTCTGAGAAATATGGATAGCGCTTTGA
CGAGAATGCTGAACGACTTTGTCAAGATTTACGATATTCAAGAGAGTGAA
CAAGCTTTCAGGTACTATGTATAATCAATTGTGTTTCTACTGGGAAGCTC
TGGGAAAGAACCAAGCTTTTTGGTAGATTCCACTTAGCACACTCCACATT
GCCTTTGTTTCCAGTATAGGAAGGAAACTCGAGATTAGATTTTTAGATAT
TCTAAGGTTGGGATGCCATTGATATTCAAGCACAGTTTAAATCACGCATT
CAGGATAGCAGAAAAATGTGCTGCAATCAGAATTAGCTCTCCAACTAAAA
ATTAATTCTCATTTAAACCCATTTTTAGTCAATGAATGAATGAAGTACTG
TAAGCAAATATTAAGAACATTCAAATCTAAAAACCACAAAATAAAACTAT
AAAATAAGTAAGAACAATTAAAAGTCAAGATTTACTGTAAAACATACGTG
TCGTATCAAACAGTATCGATTCATCTGGATTTGACAAAATGCCTAAAGAG
CTACATACACTACACAATATATTGATAAATAATATGGTTTGCGGACCATA
ATGTACTAAGTAAGTATCAGGGACTTTGTTATAAAAAGGAATTTTCTTTC
TGTACAAATATATTGTTGGAATATTTCAAATCGACCTGACAATATATTGC
GGAACCTTTTAAATATATTACCGGCATTCAGCAATATATTATCAATATTA
TTGCCTGACAATATATTGTGTAGTGTATGTAGCCCTTAACACACTTGTTG
TTTTTTTAGAACAGTCCCTGAGATGCTTAATGCCTTGGGCGGTGATCATT
TTGTGGAATTGACTAAGAATACAAGTACACAAGCGTTGAAAGATGAAGGT
GTAGGGGACACTTTGATTCAAGAACTGATCACAGGAATATCCAGATGCAA
TTACGGACAGTCCACTGATGACGTGAACGGTTTTACAGGTATTGTTTTTC
GTCATTTGCGATAGTTTTATCTTCTCTAACTCCCTTAAATATTCTATTAA
AGACTTCCTTAGAGGTTGTTAATTTTGATAAATTAAAGGCTGGCTTTTTG
CAAGGATTTAAAAATACTAAATAAGCCAAACGTAGATAAATTGAAATAGT
TGTTTTTGTTGATTTTTCTATGTTGAACCTCAAAGATATCTTACATAAAA
GACTGGAATAGAACTTCTTCCTGAAGGGCTACATACACTACAAAGTTCTA
CTCACAATATATTGGAAAAGTGTCCAGCTCGATTTGCAATAATCAAACAA
TGAAGGGGGATCGTTACGGAAAGAAAATTTCTTTTTATGATCTAGAGAGA
AAATTGTTATCACCATTTGATAGTATGGTCAAACCATATTGTACGCCAAT
GGACTGTTCTATAAAAAACCATACAGGGGGGGTGAACGAACCTTTTCAAG
TCAAAAAGAAATTATTCAAACTATTAATTAATATTAAACCAAATTATTAT
AACCACTAGAAAATGGCAAAATCTGCAAAAATACCCTCTGAAAAATTCTT
TTCGTACCTTAAAGTGAGGGTGGACCAACTAAAATCAGTCATTTAATCCC
TGAAAGTTTTAAAATAACTTTACTCCCTCGGAAAAATGAAAAAACACCCC
CTGGAAATTCTTCTCAGATCACCCTCTGGAAATGTTGGTCCACCTCCCTG
TATGGATATAAAATGAAATGGCCCAATTATATTGTGCAGTCTAAGTAGCT
CTACATTCCATTTGTCAAAAGGTTTTGTTTCTTTGGCTGGTGCTCAAGAA
GGTGCTTTATGGAATGTGAAAGATGGTAATTATAAGGTCCCGCAATCACT
GATAGAAAACTCTAAAGCTAACATTCGTACGAATACAAAAATCACCTCTA
TTAAAAGATACGAGAGAGACAATAAAGTGAAATATGAACTCGAGGGAGCA
CCAAAAAATGAATTTTACGATGCAATCATTGTCGCAGCGCCTTTAGAAGT
TCCTTCTTGTTTTCTGGACTGTACCAAATGCAAGAATTGGCCTTGTAAAG
AAGAATTACAGAAATACCAAAAGACAATCGCAACTTTCATACAAATGCCT
TTGAACCATGAGTATTTTGGTGTCAAATGCAAAGAAGACATGGCAGACGT
TGTTATTACAACCGATTCTAAGGAAAATGCTTTTTCAACAGTTGCCCCAC
AAAAGACTGTCAAGGGAGTGGTCACAGAACCACCTGTATATAAAATCTTC
TCCCGAGAGCCTTTATCGGATGCGTTGGTCAAAAAGATGTTTATCGTCAA
TTCTGATAATGAAAATAAAACATCATCTGACCGAACTGTTGTCAGTTGGC
TAGCCTATCCACATTATTCTCCACCTGAGAAGTTTTTACCGTTCGAATTG
GACGAAGGAGTGTTTTATGTGAATGCAATTGAACGAGCAGCTTCGGCAAT
GGAAATGAGTGCTATTGGTGGACGCAATGCTGCTTTGTTAGCTTATCATT
ATCTGAAAGGTGCACCAAAGAAATAAGTTTTATTGTCTTCTTCATCTGTA
TAAAGGCTGGTTGGTTCCACTTGCGCGCGTTGTGATCGCACTTTTTCGTG
CAAAGCTTCCACGCTATTTGTTAAAAGAACAATGAAACATTCCATTGGCG
TGATCCGGCGTAATGGTTGAAAAAAGTTTAAAAAAGTTTAAAATGTATTC
AACTTTTTTTTCGAGCAAGCGCTACATTTTTAAGATCGATGAGCTGGAGT
TTTTATAAGATACTTCACTAATTGGTCATTTGAAGTAATAGAGATGACGC
GTTCTTTAGAAAAAGTAATAAAATGTTTTTATTATATCTTAACGACCATG
CAAATCACATAAAAGCTTGTAAAAACTCCAGCTTGTCCCATTTTTAAGAC
GAGCAAAAAGGATTGAAGCCAAAAAGGTGC Coding sequence (CDS) from alignment at sc0000385:416252..424381- >TCONS_00021385 ID=TCONS_00021385|Name=TCONS_00021385|organism=Clytia hemisphaerica|type=CDS|length=7650bp|location=Sequence derived from alignment at sc0000385:416252..424381- (Clytia hemisphaerica) GTTTTGTTTCTTTGGCTGGTGCTCAAGAAGGTGCTTTATGGAATGTGAAA GATGGTAATTATAAGGTCCCGCAATCACTGATAGAAAACTCTAAAGCTAA CATTCGTACGAATACAAAAATCACCTCTATTAAAAGATACGAGAGAGACA ATAAAGTGAAATATGAACTCGAGGGAGCACCAAAAAATGAATTTTACGAT GCAATCATTGTCGCAGCGCCTTTAGAAGTTCCTTCTTGTTTTCTGGACTG TACCAAATGCAAGAATTGGCCTTGTAAAGAAGAATTACAGAAATACCAAA AGACAATCGCAACTTTCATACAAATGCCTTTGAACCATGAGTATTTTGGT GTCAAATGCAAAGAAGACATGGCAGACGTTGTTATTACAACCGATTCTAA GGAAAATGCTTTTTCAACAGTTGCCCCACAAAAGACTGTCAAGGGAGTGG TCACAGAACCACCTGTATATAAAATCTTCTCCCGAGAGCCTTTATCGGAT GCGTTGGTCAAAAAGATGTTTATCGTCAATTCTGATAATGAAAATAAAAC ATCATCTGACCGAACTGTTGTCAGTTGGCTAGCCTATCCACATTATTCTC CACCTGAGAAGTTTTTACCGTTCGAATTGGACGAAGGAGTGTTTTATGTG AATGCAATTGAACGAGCAGCTTCGGCAATGGAAATGAGTGCTATTGGTGG ACGCAATGCTGCTTTGTTAGCTTATCATTATCTGAAAGGTGCACCAAAGA AATAAAACAGTCCCTGAGATGCTTAATGCCTTGGGCGGTGATCATTTTGT GGAATTGACTAAGAATACAAGTACACAAGCGTTGAAAGATGAAGGTGTAG GGGACACTTTGATTCAAGAACTGATCACAGGAATATCCAGATGCAATTAC GGACAGTCCACTGATGACGTGAACGGTTTTACAGAGATGGATACAAACAT AGCAACCGATGATGCAAAGCTTGGCATCTACAATGGGAAAGAATTTGTCT TTCTCCAAAGCTCATGGAAATGGCTGAATGTTGCCAAACTGATATGGCGT TATGGACCGTTCTCTCTGAGAAATATGGATAGCGCTTTGACGAGAATGCT GAACGACTTTGTCAAGATTTACGATATTCAAGAGAGTGAACAAGCTTTCA GAAAGCTACTTGGAAATGAAGTGCAAATTGATGTATTTGAGAAAAATGAT CACCTTGGTGGTCGTATGCATGCTATTGATGTGAATGGGGAACAGATAGA ATCTGGTGGCACTATTATTCATTCATCAAATCGATACATGGTAGACTTTG CCAAAGACTTAGATGACAGTCAGAAGTATTGTGAAGATCTCTTTGACAGC TTCTGTAACTTTAGTTACAGGAAGTTATCTGTTTGAAGCGACAAACAAGG TCATTGCAGAAGAGAATACTGAGCACATAGATTCATCAGCCAGTAAAACA TCCAACAATTTCGAGATCAATGGCAAAATTGCAGTCATTGGAACTGGCAT AGGTGGAGCATCAGCAACGCACTTTCTAAGGTTTTGTTTCTTTGGCTGGT GCTCAAGAAGGTGCTTTATGGAATGTGAAAGATGGTAATTATAAGGTCCC GCAATCACTGATAGAAAACTCTAAAGCTAACATTCGTACGAATACAAAAA TCACCTCTATTAAAAGATACGAGAGAGACAATAAAGTGAAATATGAACTC GAGGGAGCACCAAAAAATGAATTTTACGATGCAATCATTGTCGCAGCGCC TTTAGAAGTTCCTTCTTGTTTTCTGGACTGTACCAAATGCAAGAATTGGC CTTGTAAAGAAGAATTACAGAAATACCAAAAGACAATCGCAACTTTCATA CAAATGCCTTTGAACCATGAGTATTTTGGTGTCAAATGCAAAGAAGACAT GGCAGACGTTGTTATTACAACCGATTCTAAGGAAAATGCTTTTTCAACAG TTGCCCCACAAAAGACTGTCAAGGGAGTGGTCACAGAACCACCTGTATAT AAAATCTTCTCCCGAGAGCCTTTATCGGATGCGTTGGTCAAAAAGATGTT TATCGTCAATTCTGATAATGAAAATAAAACATCATCTGACCGAACTGTTG TCAGTTGGCTAGCCTATCCACATTATTCTCCACCTGAGAAGTTTTTACCG TTCGAATTGGACGAAGGAGTGTTTTATGTGAATGCAATTGAACGAGCAGC TTCGGCAATGGAAATGAGTGCTATTGGTGGACGCAATGCTGCTTTGTTAG CTTATCATTATCTGAAAGGTGCACCAAAGAAATAAAACAGTCCCTGAGAT GCTTAATGCCTTGGGCGGTGATCATTTTGTGGAATTGACTAAGAATACAA GTACACAAGCGTTGAAAGATGAAGGTGTAGGGGACACTTTGATTCAAGAA CTGATCACAGGAATATCCAGATGCAATTACGGACAGTCCACTGATGACGT GAACGGTTTTACAGAGATGGATACAAACATAGCAACCGATGATGCAAAGC TTGGCATCTACAATGGGAAAGAATTTGTCTTTCTCCAAAGCTCATGGAAA TGGCTGAATGTTGCCAAACTGATATGGCGTTATGGACCGTTCTCTCTGAG AAATATGGATAGCGCTTTGACGAGAATGCTGAACGACTTTGTCAAGATTT ACGATATTCAAGAGAGTGAACAAGCTTTCAGAAAGCTACTTGGAAATGAA GTGCAAATTGATGTATTTGAGAAAAATGATCACCTTGGTGGTCGTATGCA TGCTATTGATGTGAATGGGGAACAGATAGAATCTGGTGGCACTATTATTC ATTCATCAAATCGATACATGGTAGACTTTGCCAAAGACTTAGATGACAGT CAGAAGTATTGTGAAGATCTCTTTGACAGCTTCTGTAACTTTAGTTACAG GAAGTTATCTGTTTGAAGCGACAAACAAGGTCATTGCAGAAGAGAATACT GAGCACATAGATTCATCAGCCAGTAAAACATCCAACAATTTCGAGATCAA TGGCAAAATTGCAGTCATTGGAACTGGCATAGGTGGAGCATCAGCAACGC ACTTTCTAAGGTTTTGTTTCTTTGGCTGGTGCTCAAGAAGGTGCTTTATG GAATGTGAAAGATGGTAATTATAAGGTCCCGCAATCACTGATAGAAAACT CTAAAGCTAACATTCGTACGAATACAAAAATCACCTCTATTAAAAGATAC GAGAGAGACAATAAAGTGAAATATGAACTCGAGGGAGCACCAAAAAATGA ATTTTACGATGCAATCATTGTCGCAGCGCCTTTAGAAGTTCCTTCTTGTT TTCTGGACTGTACCAAATGCAAGAATTGGCCTTGTAAAGAAGAATTACAG AAATACCAAAAGACAATCGCAACTTTCATACAAATGCCTTTGAACCATGA GTATTTTGGTGTCAAATGCAAAGAAGACATGGCAGACGTTGTTATTACAA CCGATTCTAAGGAAAATGCTTTTTCAACAGTTGCCCCACAAAAGACTGTC AAGGGAGTGGTCACAGAACCACCTGTATATAAAATCTTCTCCCGAGAGCC TTTATCGGATGCGTTGGTCAAAAAGATGTTTATCGTCAATTCTGATAATG AAAATAAAACATCATCTGACCGAACTGTTGTCAGTTGGCTAGCCTATCCA CATTATTCTCCACCTGAGAAGTTTTTACCGTTCGAATTGGACGAAGGAGT GTTTTATGTGAATGCAATTGAACGAGCAGCTTCGGCAATGGAAATGAGTG CTATTGGTGGACGCAATGCTGCTTTGTTAGCTTATCATTATCTGAAAGGT GCACCAAAGAAATAAAACAGTCCCTGAGATGCTTAATGCCTTGGGCGGTG ATCATTTTGTGGAATTGACTAAGAATACAAGTACACAAGCGTTGAAAGAT GAAGGTGTAGGGGACACTTTGATTCAAGAACTGATCACAGGAATATCCAG ATGCAATTACGGACAGTCCACTGATGACGTGAACGGTTTTACAGAGATGG ATACAAACATAGCAACCGATGATGCAAAGCTTGGCATCTACAATGGGAAA GAATTTGTCTTTCTCCAAAGCTCATGGAAATGGCTGAATGTTGCCAAACT GATATGGCGTTATGGACCGTTCTCTCTGAGAAATATGGATAGCGCTTTGA CGAGAATGCTGAACGACTTTGTCAAGATTTACGATATTCAAGAGAGTGAA CAAGCTTTCAGAAAGCTACTTGGAAATGAAGTGCAAATTGATGTATTTGA GAAAAATGATCACCTTGGTGGTCGTATGCATGCTATTGATGTGAATGGGG AACAGATAGAATCTGGTGGCACTATTATTCATTCATCAAATCGATACATG GTAGACTTTGCCAAAGACTTAGATGACAGTCAGAAGTATTGTGAAGATCT CTTTGACAGCTTCTGTAACTTTAGTTACAGGAAGTTATCTGTTTGAAGCG ACAAACAAGGTCATTGCAGAAGAGAATACTGAGCACATAGATTCATCAGC CAGTAAAACATCCAACAATTTCGAGATCAATGGCAAAATTGCAGTCATTG GAACTGGCATAGGTGGAGCATCAGCAACGCACTTTCTAAGGTTTTGTTTC TTTGGCTGGTGCTCAAGAAGGTGCTTTATGGAATGTGAAAGATGGTAATT ATAAGGTCCCGCAATCACTGATAGAAAACTCTAAAGCTAACATTCGTACG AATACAAAAATCACCTCTATTAAAAGATACGAGAGAGACAATAAAGTGAA ATATGAACTCGAGGGAGCACCAAAAAATGAATTTTACGATGCAATCATTG TCGCAGCGCCTTTAGAAGTTCCTTCTTGTTTTCTGGACTGTACCAAATGC AAGAATTGGCCTTGTAAAGAAGAATTACAGAAATACCAAAAGACAATCGC AACTTTCATACAAATGCCTTTGAACCATGAGTATTTTGGTGTCAAATGCA AAGAAGACATGGCAGACGTTGTTATTACAACCGATTCTAAGGAAAATGCT TTTTCAACAGTTGCCCCACAAAAGACTGTCAAGGGAGTGGTCACAGAACC ACCTGTATATAAAATCTTCTCCCGAGAGCCTTTATCGGATGCGTTGGTCA AAAAGATGTTTATCGTCAATTCTGATAATGAAAATAAAACATCATCTGAC CGAACTGTTGTCAGTTGGCTAGCCTATCCACATTATTCTCCACCTGAGAA GTTTTTACCGTTCGAATTGGACGAAGGAGTGTTTTATGTGAATGCAATTG AACGAGCAGCTTCGGCAATGGAAATGAGTGCTATTGGTGGACGCAATGCT GCTTTGTTAGCTTATCATTATCTGAAAGGTGCACCAAAGAAATAAAACAG TCCCTGAGATGCTTAATGCCTTGGGCGGTGATCATTTTGTGGAATTGACT AAGAATACAAGTACACAAGCGTTGAAAGATGAAGGTGTAGGGGACACTTT GATTCAAGAACTGATCACAGGAATATCCAGATGCAATTACGGACAGTCCA CTGATGACGTGAACGGTTTTACAGAGATGGATACAAACATAGCAACCGAT GATGCAAAGCTTGGCATCTACAATGGGAAAGAATTTGTCTTTCTCCAAAG CTCATGGAAATGGCTGAATGTTGCCAAACTGATATGGCGTTATGGACCGT TCTCTCTGAGAAATATGGATAGCGCTTTGACGAGAATGCTGAACGACTTT GTCAAGATTTACGATATTCAAGAGAGTGAACAAGCTTTCAGAAAGCTACT TGGAAATGAAGTGCAAATTGATGTATTTGAGAAAAATGATCACCTTGGTG GTCGTATGCATGCTATTGATGTGAATGGGGAACAGATAGAATCTGGTGGC ACTATTATTCATTCATCAAATCGATACATGGTAGACTTTGCCAAAGACTT AGATGACAGTCAGAAGTATTGTGAAGATCTCTTTGACAGCTTCTGTAACT TTAGTTACAGGAAGTTATCTGTTTGAAGCGACAAACAAGGTCATTGCAGA AGAGAATACTGAGCACATAGATTCATCAGCCAGTAAAACATCCAACAATT TCGAGATCAATGGCAAAATTGCAGTCATTGGAACTGGCATAGGTGGAGCA TCAGCAACGCACTTTCTAAGGTTTTGTTTCTTTGGCTGGTGCTCAAGAAG GTGCTTTATGGAATGTGAAAGATGGTAATTATAAGGTCCCGCAATCACTG ATAGAAAACTCTAAAGCTAACATTCGTACGAATACAAAAATCACCTCTAT TAAAAGATACGAGAGAGACAATAAAGTGAAATATGAACTCGAGGGAGCAC CAAAAAATGAATTTTACGATGCAATCATTGTCGCAGCGCCTTTAGAAGTT CCTTCTTGTTTTCTGGACTGTACCAAATGCAAGAATTGGCCTTGTAAAGA AGAATTACAGAAATACCAAAAGACAATCGCAACTTTCATACAAATGCCTT TGAACCATGAGTATTTTGGTGTCAAATGCAAAGAAGACATGGCAGACGTT GTTATTACAACCGATTCTAAGGAAAATGCTTTTTCAACAGTTGCCCCACA AAAGACTGTCAAGGGAGTGGTCACAGAACCACCTGTATATAAAATCTTCT CCCGAGAGCCTTTATCGGATGCGTTGGTCAAAAAGATGTTTATCGTCAAT TCTGATAATGAAAATAAAACATCATCTGACCGAACTGTTGTCAGTTGGCT AGCCTATCCACATTATTCTCCACCTGAGAAGTTTTTACCGTTCGAATTGG ACGAAGGAGTGTTTTATGTGAATGCAATTGAACGAGCAGCTTCGGCAATG GAAATGAGTGCTATTGGTGGACGCAATGCTGCTTTGTTAGCTTATCATTA TCTGAAAGGTGCACCAAAGAAATAAAACAGTCCCTGAGATGCTTAATGCC TTGGGCGGTGATCATTTTGTGGAATTGACTAAGAATACAAGTACACAAGC GTTGAAAGATGAAGGTGTAGGGGACACTTTGATTCAAGAACTGATCACAG GAATATCCAGATGCAATTACGGACAGTCCACTGATGACGTGAACGGTTTT ACAGAGATGGATACAAACATAGCAACCGATGATGCAAAGCTTGGCATCTA CAATGGGAAAGAATTTGTCTTTCTCCAAAGCTCATGGAAATGGCTGAATG TTGCCAAACTGATATGGCGTTATGGACCGTTCTCTCTGAGAAATATGGAT AGCGCTTTGACGAGAATGCTGAACGACTTTGTCAAGATTTACGATATTCA AGAGAGTGAACAAGCTTTCAGAAAGCTACTTGGAAATGAAGTGCAAATTG ATGTATTTGAGAAAAATGATCACCTTGGTGGTCGTATGCATGCTATTGAT GTGAATGGGGAACAGATAGAATCTGGTGGCACTATTATTCATTCATCAAA TCGATACATGGTAGACTTTGCCAAAGACTTAGATGACAGTCAGAAGTATT GTGAAGATCTCTTTGACAGCTTCTGTAACTTTAGTTACAGGAAGTTATCT GTTTGAAGCGACAAACAAGGTCATTGCAGAAGAGAATACTGAGCACATAG ATTCATCAGCCAGTAAAACATCCAACAATTTCGAGATCAATGGCAAAATT GCAGTCATTGGAACTGGCATAGGTGGAGCATCAGCAACGCACTTTCTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00021385-exon-sc0000385-1575043694:424296..424381 | TCONS_00021385-exon-sc0000385-1575043694:424296..424381 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1575043694:420511..420743 | TCONS_00021385-exon-sc0000385-1575043694:420511..420743 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1575043694:419834..419994 | TCONS_00021385-exon-sc0000385-1575043694:419834..419994 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1575043694:419071..419287 | TCONS_00021385-exon-sc0000385-1575043694:419071..419287 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1575043694:418194..418372 | TCONS_00021385-exon-sc0000385-1575043694:418194..418372 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1575043694:416252..417410 | TCONS_00021385-exon-sc0000385-1575043694:416252..417410 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1510915933:424296..424381 | TCONS_00021385-exon-sc0000385-1510915933:424296..424381 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1510915933:420511..420743 | TCONS_00021385-exon-sc0000385-1510915933:420511..420743 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1510915933:419834..419994 | TCONS_00021385-exon-sc0000385-1510915933:419834..419994 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1510915933:419071..419287 | TCONS_00021385-exon-sc0000385-1510915933:419071..419287 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1510915933:418194..418372 | TCONS_00021385-exon-sc0000385-1510915933:418194..418372 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1510915933:416252..417410 | TCONS_00021385-exon-sc0000385-1510915933:416252..417410 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1491911889:424296..424381 | TCONS_00021385-exon-sc0000385-1491911889:424296..424381 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1491911889:420511..420743 | TCONS_00021385-exon-sc0000385-1491911889:420511..420743 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1491911889:419834..419994 | TCONS_00021385-exon-sc0000385-1491911889:419834..419994 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1491911889:419071..419287 | TCONS_00021385-exon-sc0000385-1491911889:419071..419287 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1491911889:418194..418372 | TCONS_00021385-exon-sc0000385-1491911889:418194..418372 | Clytia hemisphaerica | exon |
TCONS_00021385-exon-sc0000385-1491911889:416252..417410 | TCONS_00021385-exon-sc0000385-1491911889:416252..417410 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000385 | supercontig | sc0000385:416252..424381 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0001735 | prenylcysteine oxidase activity |
GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor |
GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
GO:0030328 | prenylcysteine catabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0055114 |
oxidation-reduction process |
biological_process |
GO:0030328 |
prenylcysteine catabolic process |
molecular_function |
GO:0016491 |
oxidoreductase activity |
molecular_function |
GO:0016670 |
oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor |
molecular_function |
GO:0001735 |
prenylcysteine oxidase activity |
Blast
BLAST of TCONS_00021385 vs. Swiss-Prot (Human)
Match: PCYOX (Prenylcysteine oxidase 1 OS=Homo sapiens GN=PCYOX1 PE=1 SV=3) HSP 1 Score: 272.322 bits (695), Expect = 2.951e-82 Identity = 174/462 (37.66%), Postives = 259/462 (56.06%), Query Frame = 3
Query: 300 SATHFLRKLLGNEVQIDVFEKNDHLGGRMHAIDVNGEQIESGGTIIHSSNRYMVDFAKDLEMDTNIATDDAKLGIYNGKEFVFLQSSWKWLNVAKLIWRYGPFSLRNMDSALTRMLNDFVKIYDIQESEQAFRTVPEMLNALGGDHFVELTKNTSTQALKDEGVGDTLIQELITGISRCNYGQSTDDVNGFTGFVSLAGAQEGALWNVKDGNYKVPQSLIENSKANI----------RTNTKITS--IKRYERDNKVKYELEGAPKNEFYDAIIVAAPLEVPSC---FLDCTKCKNWPCKEELQKYQKTIATFIQMPLNHEYFGVKCKEDMA-DVVITTDSKENAFSTVAPQKTVKGVVTEPP------VYKIFSREPLSDALVKKMFIVNSDNENKTSSDRTVVS-WLAYPHYSPPEKFLPFELDEGVFYVNAIERAASAMEMSAIGGRNAALLAYHYLKG 1616
SA ++LR+ G +V+ID+FE+ + +GGR+ + V G++ E+GG++IH N +M F KDL + + + LGIYNG+ VF +S+W +NV KL+WRYG SLR M + +L+ F++IY Q + AF +V ++L+ALGGD F+ + T + L+ G + + E+I + R NYGQSTD +N F G VSL+ + G LW V+ GN V L++ SK+N+ +T TK T K YE V Y++ +++FYD ++VA PL FL+ P +E Q YQ + T ++ LN F + + + V+TTD+ + +++ +V+ P V+KIFS+E L+ A + K+F+ S D V WLAYPHY PPEK L + ++Y+N IE AASAMEMSAI NAALLAYH G
Sbjct: 48 SAAYYLRQKFGKDVKIDLFEREE-VGGRLATMMVQGQEYEAGGSVIHPLNLHMKRFVKDLGL-SAVQASGGLLGIYNGETLVFEESNWFIINVIKLVWRYGFQSLR-MHMWVEDVLDKFMRIYRYQSHDYAFSSVEKLLHALGGDDFLGMLNRTLLETLQKAGFSEKFLNEMIAPVMRVNYGQSTD-INAFVGAVSLSCSDSG-LWAVEGGNKLVCSGLLQASKSNLISGSVMYIEEKTKTKYTGNPTKMYE----VVYQIGTETRSDFYDIVLVATPLNRKMSNITFLNFDP----PIEEFHQYYQHIVTTLVKGELNTSIFSSRPIDKFGLNTVLTTDNSDLFINSIGIVPSVREKEDPEPSTDGTYVWKIFSQETLTKAQILKLFL---------SYDYAVKKPWLAYPHYKPPEKCPSIILHDRLYYLNGIECAASAMEMSAIAAHNAALLAYHRWNG 487
The following BLAST results are available for this feature:
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