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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021460 ID=TCONS_00021460|Name=TCONS_00021460|organism=Clytia hemisphaerica|type=transcript|length=987bp
TCCTCTTCCGTTCGCGTCGATTAAAAAAACATAATGGTAGCTTGAGCTGC
AGAAATAGACATTTGACCCCTCCATACAGGGCGATTTTAGCTTTAGGTTC
tctttgctttttctttcattcttCGGTTGTACAGAATAATTAACAGCCTG
GGAAATGGTTTGACATAATCTTGGTTGCTTATTACAAGAAATATTCCTGA
TAAATTCATGATGGATTTGAATTTAAGAGTCTCTGGTTTGGTCAAAcatg
tttcgaattttttacAGACTGgttttatttgaaaaagctAGATTCAGAAG
TAATAAACCAAAGCTACTTAACAACAAGAATAAAATTGGGGAAGAAGAAA
CTAATTCATACAACTCACTTAAGGACAAACGTGACACTGACACACGCACA
AACATCAAGCTACAAACTTAGCAGAGGGGAACCCAATTTGAGAAAAGGCA
AAAATAATGTTTGAAATTGAATTATGGCAACAGAAATGCATGATATGACA
AACAAATCGGGTTTAACTATATAAAGCCAAAAAACACACAGTAAATTTAT
AGGAAAAGACTGAACTTTGAGCAATCGAATATGAAATGAAATGGGAGAAA
TATCAATATCTGATAAAATTATTTGTAAGAGTCTTCATCTGTGGAATAGA
GAATTATATTATATCTTTACTTAGTCTTTTAATAATAGTTTCAAAAAGTA
CTTAATGATATTCTTgactaaacaaaaaaaacaacagcaGTATTGCTTAC
ATTTTATTGTCTTGGGATGCAATTTTTAGGGTTCTTAATCCAATTTATGA
TCATTTTAACTGTTACATGATTACCTTTACTACATTGCCGATATGTTTCA
AATAGTTACATTTCTAGCAGAACCTGGACATTTGAAAAGGAATATTCTCA
AAGTACTAATATTTCTCCGTGTGTCCAATatataaatgaataaaaatgaa
tattttgattattgttttcaattcattttgaatAGTT Run BLAST on NCBI transcript from alignment at sc0000386:72421..75130- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021460 ID=TCONS_00021460|Name=TCONS_00021460|organism=Clytia hemisphaerica|type=transcript|length=2710bp|location=Sequence derived from alignment at sc0000386:72421..75130- (Clytia hemisphaerica)
TCCTCTTCCGTTCGCGTCGATTAAAAAAACATAATGGTAGCTTGAGCTGC
AGAAATAGACATTTGACCCCTCCATACAGGGCGATTTTAGCTTTAGGTTC
TCTTTGCTTTTTCTTTCATTCTTCGGTTGTACAGAATAATTAACAGCCTG
GGAAATGGTTTGACATAATCTTGGTTGCTTATTACAAGAAATATTCCTGA
TAAATTCATGATGGATTTGAATTTAAGGTGAGTAGTTATATTGTTAGGGA
CAGATAAAAAAGGCAGATCGGGTTTTTTTATAGCTAGGCCTTTTTAGGGT
TAATGAGGGTTTTTGTGTATGTCATTATTTATTTAATCACTTGTTTAGAA
TTTTGAATCGTTATTATCTCTTTGTGACGTCCAGCTCACATAAATGACCT
TCAANTTAGAATTTTGAATTGTTATTATCTCTTTGTGACGTCCAGCTCAC
ATAAATGACCTTCAAAATGCCCCTCCCATACTGACTGGTGTATATATCTA
TATGTATACACATAATAGCATGTCACACAGCACAGGCAGTCAGGGACTTT
CTGCAATTGCAGTATAATTATGTATACCTTGATCGCAGGAAGCGCCTGAC
TGACAGGTCGGGAAGGATATCCTTGCTTTATGCTTTGGTTTGCACAACAA
TTGCATGGCATGCATGGGGTTATTCGCATTGCAATCGGTGATTATGTTAG
GCGGTAATCAAAAATATGTTCCATTCGGGACTGTTTATTTACAAGAAAAC
CCGATTCGGAAAGACGGTAAAATCGCCGGGTTTTTATGGGCGCTGTTCAC
AGGTTCAGATCTTTCCCATAATGGTGGGCACGGGTGAAAGGAGCTTGTCT
TTGAATCATTATTTTTTGTTTACTTAACCCACATTGAGTCCCTTTCAAGT
TTTTTCATGTACCCTTATTGAAATTTTCATGTCAAAATTCAGCAACGCGG
TAGGGCCAATACCCTGGGGGTCGAAAATAAGGGCCACTTTTAAGGCTAAC
ACACATGATGCGCGCGCACATTTAGTTTGGCAAATTGACCCGAATGGAAG
ATATTTTTGATTGCCGCCTTATGATGAGCTGGATAAAATTTTATTTTTCA
GAAAATTGGATTTTGTAGATGAAATATATTTTTCCAATGGGGTCATTTTT
TTCTTTAATTTGAAGATTATTTTATATACTGAAGAAATAAAGTTGCCGTT
TGAATTTGTCTTTTGGCGTTTTTGATTTCAAACATATGTTTTGCCCAAAA
TATCTTTTTGTATTTACACTGGGTATTGAAAACCTGTTAAGTGTTGCAAA
TGCACACCTCATGTAAGATTTCGAGGTATGCGAGCGGGAGGTTAACAAAA
CACTACAAAAAATTAAACTAAAACTACGCAGCTCCGCTCGCAGCTCTAAT
CTACCAGACTCTACCATTTTTGTTTTGATTTAACTTTGTATTTTAATGAC
CAGCCAGGTCTTTCATTTGAGGGCTATGCATGTTACCCTCTACTGATGCA
AGTTACCCGATCTCACGGTATTGATAGATAATCAAGGTTTAAAAAAATTA
TGCGTATCTATTTCAGAAATTAAGGGTGATTTCTGTAATTCTGAAACCCT
GTGTAAGGCACGTGTTTGTTCTTCTGTTCTTAATTTTTTTTTAATATGAC
CGATGGCTATTCTTTCATTCTGAGGTGATGAAACTTGAAGGAAAGTTGTT
AGTTTGATGGCTGGCTTTAAATGTGAAATATCACGTCTTATCGTTAGACC
CTAAAATGCACTTAATTTTGAATTTATATTTTATATGAAATCCGTCAATT
AGATATAAGATATTTCAATATAAGATATTTCAATATAAATATGTAAAGAA
GACGTAAATGAAGCTGAAAAGACCTAGTTTTGAAAAAAAAATCATTATTT
TTGCATCTTTAGCTTTAATTATAATTTTATTCTTCCTATCTTATATTTAG
AGTCTCTGGTTTGGTCAAACATGTTTCGAATTTTTTACAGACTGGTTTTA
TTTGAAAAAGCTAGATTCAGAAGTAATAAACCAAAGCTACTTAACAACAA
GAATAAAATTGGGGAAGAAGAAACTAATTCATACAACTCACTTAAGGACA
AACGTGACACTGACACACGCACAAACATCAAGCTACAAACTTAGCAGAGG
GGAACCCAATTTGAGAAAAGGCAAAAATAATGTTTGAAATTGAATTATGG
CAACAGAAATGCATGATATGACAAACAAATCGGGTTTAACTATATAAAGC
CAAAAAACACACAGTAAATTTATAGGAAAAGACTGAACTTTGAGCAATCG
AATATGAAATGAAATGGGAGAAATATCAATATCTGATAAAATTATTTGTA
AGAGTCTTCATCTGTGGAATAGAGAATTATATTATATCTTTACTTAGTCT
TTTAATAATAGTTTCAAAAAGTACTTAATGATATTCTTGACTAAACAAAA
AAAACAACAGCAGTATTGCTTACATTTTATTGTCTTGGGATGCAATTTTT
AGGGTTCTTAATCCAATTTATGATCATTTTAACTGTTACATGATTACCTT
TACTACATTGCCGATATGTTTCAAATAGTTACATTTCTAGCAGAACCTGG
ACATTTGAAAAGGAATATTCTCAAAGTACTAATATTTCTCCGTGTGTCCA
ATATATAAATGAATAAAAATGAATATTTTGATTATTGTTTTCAATTCATT
TTGAATAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021460-exon-sc0000386-1575043694:74904..75130 | TCONS_00021460-exon-sc0000386-1575043694:74904..75130 | Clytia hemisphaerica | exon |
| TCONS_00021460-exon-sc0000386-1575043694:72421..73180 | TCONS_00021460-exon-sc0000386-1575043694:72421..73180 | Clytia hemisphaerica | exon |
| TCONS_00021460-exon-sc0000386-1510915933:74904..75130 | TCONS_00021460-exon-sc0000386-1510915933:74904..75130 | Clytia hemisphaerica | exon |
| TCONS_00021460-exon-sc0000386-1510915933:72421..73180 | TCONS_00021460-exon-sc0000386-1510915933:72421..73180 | Clytia hemisphaerica | exon |
| TCONS_00021460-exon-sc0000386-1491911889:74904..75130 | TCONS_00021460-exon-sc0000386-1491911889:74904..75130 | Clytia hemisphaerica | exon |
| TCONS_00021460-exon-sc0000386-1491911889:72421..73180 | TCONS_00021460-exon-sc0000386-1491911889:72421..73180 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000386 | supercontig | sc0000386:72421..75130 - |
Blast
The following BLAST results are available for this feature:
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