TCONS_00021516 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021516
Unique NameTCONS_00021516
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021516 ID=TCONS_00021516|Name=TCONS_00021516|organism=Clytia hemisphaerica|type=transcript|length=143bp
CCACACATATTTTGATAATTCTGTTGAGTTCGCTTTGTCTTCATATCGAA
AGGTGTGGCTGTGTTGATACCATCGGGTTTTAAAAGAGTTTTCTGTTAGC
CCAATGTAGTTATCATTGTAGACTagagtcccggggggggggg
Run BLAST on NCBI

transcript from alignment at sc0000388:23018..23160

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021516 ID=TCONS_00021516|Name=TCONS_00021516|organism=Clytia hemisphaerica|type=transcript|length=143bp|location=Sequence derived from alignment at sc0000388:23018..23160 (Clytia hemisphaerica)
cccccccccccgggactctAGTCTACAATGATAACTACATTGGGCTAACA
GAAAACTCTTTTAAAACCCGATGGTATCAACACAGCCACACCTTTCGATA
TGAAGACAAAGCGAACTCAACAGAATTATCAAAATATGTGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012062XLOC_012062Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021516-exon-sc0000388-1491911889:23018..23160TCONS_00021516-exon-sc0000388-1491911889:23018..23160Clytia hemisphaericaexon
TCONS_00021516-exon-sc0000388-1510915933:23018..23160TCONS_00021516-exon-sc0000388-1510915933:23018..23160Clytia hemisphaericaexon
TCONS_00021516-exon-sc0000388-1575043694:23018..23160TCONS_00021516-exon-sc0000388-1575043694:23018..23160Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000388supercontigsc0000388:23018..23160 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021516 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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