TCONS_00021531 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021531
Unique NameTCONS_00021531
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1081

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021531 ID=TCONS_00021531|Name=TCONS_00021531|organism=Clytia hemisphaerica|type=transcript|length=1081bp
GTTCCCTGTTCCCTGTAATTTCTATCTGGAAATAATATattgaaagtgat
tttttcatttatgaaCAAATAGTATTCTCTTTAAATATGCATGAAAAGAA
AAGAGTTGGAATAGTTGGTTACGGCCATATAgGTCAATACATTTTTGACG
AAGTTCAAAAAAGTGAAGACTTGTGTGTTGACTTTGTGTGGAATAGATCC
TTTGACAAAATCAAACATCTTCCAAAAGAAGCTCAACTTGAAAATCTTGA
TGAATTTAGAACGAGAAAGGTTGACATCATCTTAGAAGTTGCACATATCA
CAACAACTCAAAAATATGGAGAACAATTTTTAGAACATGCAAATTTTATG
ATAGGATCTCCTACTGCTTTGGCTGATGAGGATCTTGAAACCAGACTGAG
AAAGAAATCCATAGAAACTGGTTATGGATTGTTTGTTCCTGCTGGTGCAT
TTTGGGGTGGTGAAGATGTACAAAAGATGGCTGATCAAGGGTCATTGAAG
GGTTTGAGAGTGACAATGAAAAAACATCCATCTTGTTTCAAAGTCCTTGG
CAAAGTAGCTGAAAGGAATGAAAAGGTTGGAGATGAACCTGTTGTATTAT
ACGAAGGTCCAGTTCGAAAGCTTTGTCCGTTGGCACCTGCTAATGTAAAC
ACGATGGCCTGTGCTGCACTAGCGGCACATAATCTAGGTTTTGATAAAGT
TCAAGGATGTCTTGTAGCTGATCGAAGtttgaaaTGCCACATAGTAGAGA
TAGAAGTGACAGGACCTCCTTTAGGTGATGATGGTGAAGAATTCACAGTC
AAAACAGTTCGAACGAATCCAAGCAAAACTGGAGTTGTTACTGGTAACGC
AACGTATGCATCCTTCTTCCAAAGTCTAAGGCGTGCATATGGAAAAGGTG
GTGGTATCCATttatgctgattcagcaaaaacGAAATTCTAGAGTATTTT
TATAGCTTTATTGTAGTTAGGTAGCATAGATTTATTATCAAGTTATTATT
AATTATCATTTATTTTTGTATACCAATTAATAGGAgattagtttttttat
aaaaatcatctATCACAAATTAAAGAGTAAT
Run BLAST on NCBI

protein sequence of TCONS_00021531-protein

>TCONS_00021531-protein ID=TCONS_00021531-protein|Name=TCONS_00021531-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
MHEKKRVGIVGYGHIGQYIFDEVQKSEDLCVDFVWNRSFDKIKHLPKEAQ
LENLDEFRTRKVDIILEVAHITTTQKYGEQFLEHANFMIGSPTALADEDL
ETRLRKKSIETGYGLFVPAGAFWGGEDVQKMADQGSLKGLRVTMKKHPSC
FKVLGKVAERNEKVGDEPVVLYEGPVRKLCPLAPANVNTMACAALAAHNL
GFDKVQGCLVADRSLKCHIVEIEVTGPPLGDDGEEFTVKTVRTNPSKTGV
VTGNATYASFFQSLRRAYGKGGGIHLC
Run BLAST on NCBI

transcript from alignment at sc0000389:154792..159009+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021531 ID=TCONS_00021531|Name=TCONS_00021531|organism=Clytia hemisphaerica|type=transcript|length=4218bp|location=Sequence derived from alignment at sc0000389:154792..159009+ (Clytia hemisphaerica)
GTTCCCTGTTCCCTGTAATTTCTATCTGGAAATAATATattgaaagtgat
tttttcatttatgaaCAAATAGTATTCTCTTTAAATATGCATGAAAAGAA
AAGAGTTGGAATAGTTGGTTACGGCCATATAggtgagttttttcaaaatg
tttttccagaaataaaatttttgctcttttttttccttaaaatgtaaTCT
TTATATTCTCCTCCTTAGTTGAACAACCTTCATCCGTAGCCTTTGACCTT
TCACGTGCCCGCTCATCACCTATGTATATCGGTCTCTCCTGTAGCCTTTA
attgatatataaaaatgattaattctaaataaattttatagGTTTTACTT
TTAAAAGGCTTCTATAATTTTTCATTAAGGTCAATACATTTTTGACGAAG
TTCAAAAAAGTGAAGACTTGTGTGTTGACTTTGTGTGGAATAGATCCTTT
GACAAAATCAAACATCTTCCAAAAGAAGCTCAACTTGAAAATCTTGATGA
ATTTAGAACGAGGTGAAAATACTTTTCTTTCTGATCTATCTATGATTTTT
CGGAAGGACTAAATGAATCTTTCTAATCCTTTAAACCCAGAGGAAACGAA
ATATGCTGTCAAAACCACTTAAAAATTGGCTAAACTTTTTGATGGAAAAC
ACTTTGAAactattgaaaaatatattttagaaACCTTCTCATTCTTGTTT
CATATTCTAATGTTTCTTCACTAGAAAGGTTGACATCATCTTAGAAGTTG
CACATATCACAACAACTCAAAAATATGGAGAACAATTTTTAGAACATGCA
AATTTTATGGTAAAGTCTTCATTATTGTGAGCTTTTTNTTTTTCATTAAG
GTCAATACATTTTTGACGAAGTTCAAAAAAGTGAAGACTTGTGTGTTGAC
TTTGTGTGGAATAGATCCTTTGACAAAATCAAACATCTTCCAAAAGAAGC
TCAACTTGAAAATCTTGATGAATTTAGAACGAGGTGAAAATACTTTTCTT
TCTGATCTATCTATGATTTTTCGGAAGGACTAAATGAATCTTTCTAATCC
TTTAAACCCAGAGGAAACGAAATATGCTGTCAAAACCACTTAAAAATTGG
CTAAACTTTTTGATGGAAAACACTTTGAAactattgaaaaatatatttta
gaaACCTTCTCATTCTTGTTTCATATTCTAATGTTTCTTCACTAGAAAGG
TTGACATCATCTTAGAAGTTGCACATATCACAACAACTCAAAAATATGGA
GAACAATTTTTAGAACATGCAAATTTTATGGTAAAGTCTTCATTCTTGTG
AGCTTTTTATGAGATGTCTTCTGTCTTTAAGATGTGGAAGATCTTGAGCA
ATGTTTTAGTTTCAAAAACTCAAATCTTATATTTATAATGTCTGTTTGGT
TTCTTCTGGCAGTGAATGAAGTTCAATGCAATtgattgtgaaaaaaaaat
gtcaacaaaaaaaaacctttcattcacaaatttgacaaattcgCTTTCAA
CATGTCGAAAGATAAATTGACTCTCAGTATCTCTCTTTCATCAGATAGGA
TCTCCTACTGCTTTGGCTGATGAGGATCTTGAAACCAGACTGAGAAAGAA
ATCCATAGAAACTGGTTATGGATTGTTTGTTCCTGCTGGTGCATTTTGGG
GTGGTGAAGATGTACAAAAGATGGCTGATCAAGGGTCATTGAAGGTGATC
TTAGACAAAATTAAGTCTCTAAAAAGACGAGACAATATTTATTTCTATGA
GGATGGATGAGCTTTTATAAAGAGtaaaaaataagtatttttGATACACC
TATCAACCCAGTCCGCTTTTTAGGGGACTTGTAATAAATTTACGAGGAGG
ATTTGAGGTGAACGCCATTTTTTAGGCCATATCTAAATCAAACCAACAAA
CTCCTGCCAAAACTCAGTGATATTTTACCAAGTCTCTGTGGTGGGGTGCA
AactatttttagcatttgaaTTGCTTAACTATATTGATGTTACTTTATTG
CTTCAATGCAAGGGTATCTTTCAATCTTATATGTTTGACAATTGAACTCC
TACACTTATATTTTCAATACTGTTGTTTAGAAGAAGTCtccttgtttttt
ttgtcaccAGGTTCCTCAAAAGCTGACCACGCCGCTAAGGGTTGATAGAT
GGTGTATAGCGTTTAAAAAAAGGGTTGATATAATTTAGAATCTGCGGTAG
ATGTTGAAGGGTTAATAAATTGATGCGCCTTTTAGAGTTGAGGTAAATCT
TAACATAATATGTTTTCATTTCCAGGGTTTGAGAGTGACAATGAAAAAAC
ATCCATCTTGTTTCAAAGTCCTTGGCAAAGTAGCTGAAAGGAATGAAAAG
GTTGGAGATGAACCTGTTGTATTATACGAAGGTTAGAtaggtctttcttt
ggtttaTCTATACTACTTATATGACTTGCTCAAAATCCTCAACGTATTAA
TTCTAGAGTAAAATTAACCAAATTTTGTACAATCTTTTGCTTACATTTAG
GTCCAGTTCGAAAGCTTTGTCCGTTGGCACCTGCTAATGTAAACACGATG
GCCTGTGCTGCACTAGCGGCACATAATCTAGGTTTTGATAAAGTTCAAGG
ATGTCTTGTAGCTGATCGAAGGTATACAGATCTTGAACGTGGATATCcaa
gctgcaaattattttcttattttgaagaTTCTGCTATTTACAGCTTGGTC
TACCTAGATGCTCTTAAACCCCTTCTGATATATTGGAATGTAAATTGCTT
TAGAAGGACCTTAAGGTAGAGCAGAAACATCATAAATTTAAACaaagttt
acagcctggatatcaaGGCTAAACAGATCATGAACGTGGTTCGAATAAAT
ATAATTGAATTGAGGTTTTTTTATCATTACCTTTGttatgaaaatgaaga
ataagACTAAgatttatttttggaaattaaacACAATCATCAGCCAAATA
AAATTATTGATCATAAATTTAGTGATAATTGTtccagtgttttttttttc
agtttgaaaTGCCACATAGTAGAGATAGAAGTGACAGGACCTCCTTTAGG
TGATGATGGTGAAGAATTCACAGTCAAAACAGTTCGAACGAATCCAAGCA
AAACTGGAGTTGTTACTGGTAACGCAACGTATGCATCCTTCTTCCAAAGT
CTAAGGCGTaagtctttttttccaaaactaTTTCTGTTCAATACAAAATC
AGTACAGGTTATCTTGCCAATTCGAACTCAAATGGGAACtttaatttgtt
cgagttaaagagagattcgaattatagaaagtatttttacgAGAACTGAT
AATTAGTTCGAATTGAGAACgattcaaataatagaagttcaaatttggga
aatcctttttttttttttttttgggtgtgttttttttttggggggggggc
ttttgTATCCAAGTTTAGGTATTATCAcattttttttgggtttttttttt
tttttggggggggggcttttgTATCCAAGTTTAGGTATTATCAcattttt
tttgggtttttttttttttttggggggggggcttttgTATCCAAGTTTAG
GTATTATCAcattttttttgggtttttttttttttttggggggggggctt
ttgTATCCAAGTTTAGGTATTATCAcattttttttgggtttttttttttt
tttggggggggggcttttgTATCCAAGTTTAGGTATTATCAcattttttt
tgggtttttttttttttttggggggggggcttttgTATCCAAGTTTAGGT
ATTATCAcattttttttgggtttttttttttttttggggggggggctttt
gTATCCAAGTTTAGGTATTATCAcattttttttgggtttttttttttttt
tgggggggggggcttttgtATCCAAGTTTAGGTATTATCACattattttc
gtgtttttttaaGTCTGGTGGTTTAACAAAATCTTCcagggaaaattttt
attgaaaattttaacaaaatctttcaggggaaattgtttttgaaagttaC
TTTATCACTTTCTTTTTAGGTGCATATGGAAAAGGTGGTGGTATCCATtt
atgctgattcagcaaaaacGAAATTCTAGAGTATTTTTATAGCTTTATTG
TAGTTAGGTAGCATAGATTTATTATCAAGTTATTATTAATTATCATTTAT
TTTTGTATACCAATTAATAGGAgattagtttttttataaaaatcatctAT
CACAAATTAAAGAGTAAT

Coding sequence (CDS) from alignment at sc0000389:154792..159009+

>TCONS_00021531 ID=TCONS_00021531|Name=TCONS_00021531|organism=Clytia hemisphaerica|type=CDS|length=7506bp|location=Sequence derived from alignment at sc0000389:154792..159009+ (Clytia hemisphaerica)
ATGCATGAAAAGAAAAGAGTTGGAATAGTTGGTTACGGCCATATAgGTCA
ATACATTTTTGACGAAGTTCAAAAAAGTGAAGACTTGTGTGTTGACTTTG
TGTGGAATAGATCCTTTGACAAAATCAAACATCTTCCAAAAGAAGCTCAA
CTTGAAAATCTTGATGAATTTAGAACGAGAAAGGTTGACATCATCTTAGA
AGTTGCACATATCACAACAACTCAAAAATATGGAGAACAATTTTTAGAAC
ATGCAAATTTTATGATAGGATCTCCTACTGCTTTGGCTGATGAGGATCTT
GAAACCAGACTGAGAAAGAAATCCATAGAAACTGGTTATGGATTGTTTGT
TCCTGCTGGTGCATTTTGGGGTGGTGAAGATGTACAAAAGATGGCTGATC
AAGGGTCATTGAAGGGTTTGAGAGTGACAATGAAAAAACATCCATCTTGT
TTCAAAGTCCTTGGCAAAGTAGCTGAAAGGAATGAAAAGGTTGGAGATGA
ACCTGTTGTATTATACGAAGGTCCAGTTCGAAAGCTTTGTCCGTTGGCAC
CTGCTAATGTAAACACGATGGCCTGTGCTGCACTAGCGGCACATAATCTA
GGTTTTGATAAAGTTCAAGGATGTCTTGTAGCTGATCGAAGtttgaaaTG
CCACATAGTAGAGATAGAAGTGACAGGACCTCCTTTAGGTGATGATGGTG
AAGAATTCACAGTCAAAACAGTTCGAACGAATCCAAGCAAAACTGGAGTT
GTTACTGGTAACGCAACGTATGCATCCTTCTTCCAAAGTCTAAGGCGTGC
ATATGGAAAAGGTGGTGGTATCCATttatgctgaATGCATGAAAAGAAAA
GAGTTGGAATAGTTGGTTACGGCCATATAgGTCAATACATTTTTGACGAA
GTTCAAAAAAGTGAAGACTTGTGTGTTGACTTTGTGTGGAATAGATCCTT
TGACAAAATCAAACATCTTCCAAAAGAAGCTCAACTTGAAAATCTTGATG
AATTTAGAACGAGAAAGGTTGACATCATCTTAGAAGTTGCACATATCACA
ACAACTCAAAAATATGGAGAACAATTTTTAGAACATGCAAATTTTATGAT
AGGATCTCCTACTGCTTTGGCTGATGAGGATCTTGAAACCAGACTGAGAA
AGAAATCCATAGAAACTGGTTATGGATTGTTTGTTCCTGCTGGTGCATTT
TGGGGTGGTGAAGATGTACAAAAGATGGCTGATCAAGGGTCATTGAAGGG
TTTGAGAGTGACAATGAAAAAACATCCATCTTGTTTCAAAGTCCTTGGCA
AAGTAGCTGAAAGGAATGAAAAGGTTGGAGATGAACCTGTTGTATTATAC
GAAGGTCCAGTTCGAAAGCTTTGTCCGTTGGCACCTGCTAATGTAAACAC
GATGGCCTGTGCTGCACTAGCGGCACATAATCTAGGTTTTGATAAAGTTC
AAGGATGTCTTGTAGCTGATCGAAGtttgaaaTGCCACATAGTAGAGATA
GAAGTGACAGGACCTCCTTTAGGTGATGATGGTGAAGAATTCACAGTCAA
AACAGTTCGAACGAATCCAAGCAAAACTGGAGTTGTTACTGGTAACGCAA
CGTATGCATCCTTCTTCCAAAGTCTAAGGCGTGCATATGGAAAAGGTGGT
GGTATCCATttatgctgaATGCATGAAAAGAAAAGAGTTGGAATAGTTGG
TTACGGCCATATAgGTCAATACATTTTTGACGAAGTTCAAAAAAGTGAAG
ACTTGTGTGTTGACTTTGTGTGGAATAGATCCTTTGACAAAATCAAACAT
CTTCCAAAAGAAGCTCAACTTGAAAATCTTGATGAATTTAGAACGAGAAA
GGTTGACATCATCTTAGAAGTTGCACATATCACAACAACTCAAAAATATG
GAGAACAATTTTTAGAACATGCAAATTTTATGATAGGATCTCCTACTGCT
TTGGCTGATGAGGATCTTGAAACCAGACTGAGAAAGAAATCCATAGAAAC
TGGTTATGGATTGTTTGTTCCTGCTGGTGCATTTTGGGGTGGTGAAGATG
TACAAAAGATGGCTGATCAAGGGTCATTGAAGGGTTTGAGAGTGACAATG
AAAAAACATCCATCTTGTTTCAAAGTCCTTGGCAAAGTAGCTGAAAGGAA
TGAAAAGGTTGGAGATGAACCTGTTGTATTATACGAAGGTCCAGTTCGAA
AGCTTTGTCCGTTGGCACCTGCTAATGTAAACACGATGGCCTGTGCTGCA
CTAGCGGCACATAATCTAGGTTTTGATAAAGTTCAAGGATGTCTTGTAGC
TGATCGAAGtttgaaaTGCCACATAGTAGAGATAGAAGTGACAGGACCTC
CTTTAGGTGATGATGGTGAAGAATTCACAGTCAAAACAGTTCGAACGAAT
CCAAGCAAAACTGGAGTTGTTACTGGTAACGCAACGTATGCATCCTTCTT
CCAAAGTCTAAGGCGTGCATATGGAAAAGGTGGTGGTATCCATttatgct
gaATGCATGAAAAGAAAAGAGTTGGAATAGTTGGTTACGGCCATATAgGT
CAATACATTTTTGACGAAGTTCAAAAAAGTGAAGACTTGTGTGTTGACTT
TGTGTGGAATAGATCCTTTGACAAAATCAAACATCTTCCAAAAGAAGCTC
AACTTGAAAATCTTGATGAATTTAGAACGAGAAAGGTTGACATCATCTTA
GAAGTTGCACATATCACAACAACTCAAAAATATGGAGAACAATTTTTAGA
ACATGCAAATTTTATGATAGGATCTCCTACTGCTTTGGCTGATGAGGATC
TTGAAACCAGACTGAGAAAGAAATCCATAGAAACTGGTTATGGATTGTTT
GTTCCTGCTGGTGCATTTTGGGGTGGTGAAGATGTACAAAAGATGGCTGA
TCAAGGGTCATTGAAGGGTTTGAGAGTGACAATGAAAAAACATCCATCTT
GTTTCAAAGTCCTTGGCAAAGTAGCTGAAAGGAATGAAAAGGTTGGAGAT
GAACCTGTTGTATTATACGAAGGTCCAGTTCGAAAGCTTTGTCCGTTGGC
ACCTGCTAATGTAAACACGATGGCCTGTGCTGCACTAGCGGCACATAATC
TAGGTTTTGATAAAGTTCAAGGATGTCTTGTAGCTGATCGAAGtttgaaa
TGCCACATAGTAGAGATAGAAGTGACAGGACCTCCTTTAGGTGATGATGG
TGAAGAATTCACAGTCAAAACAGTTCGAACGAATCCAAGCAAAACTGGAG
TTGTTACTGGTAACGCAACGTATGCATCCTTCTTCCAAAGTCTAAGGCGT
GCATATGGAAAAGGTGGTGGTATCCATttatgctgaATGCATGAAAAGAA
AAGAGTTGGAATAGTTGGTTACGGCCATATAgGTCAATACATTTTTGACG
AAGTTCAAAAAAGTGAAGACTTGTGTGTTGACTTTGTGTGGAATAGATCC
TTTGACAAAATCAAACATCTTCCAAAAGAAGCTCAACTTGAAAATCTTGA
TGAATTTAGAACGAGAAAGGTTGACATCATCTTAGAAGTTGCACATATCA
CAACAACTCAAAAATATGGAGAACAATTTTTAGAACATGCAAATTTTATG
ATAGGATCTCCTACTGCTTTGGCTGATGAGGATCTTGAAACCAGACTGAG
AAAGAAATCCATAGAAACTGGTTATGGATTGTTTGTTCCTGCTGGTGCAT
TTTGGGGTGGTGAAGATGTACAAAAGATGGCTGATCAAGGGTCATTGAAG
GGTTTGAGAGTGACAATGAAAAAACATCCATCTTGTTTCAAAGTCCTTGG
CAAAGTAGCTGAAAGGAATGAAAAGGTTGGAGATGAACCTGTTGTATTAT
ACGAAGGTCCAGTTCGAAAGCTTTGTCCGTTGGCACCTGCTAATGTAAAC
ACGATGGCCTGTGCTGCACTAGCGGCACATAATCTAGGTTTTGATAAAGT
TCAAGGATGTCTTGTAGCTGATCGAAGtttgaaaTGCCACATAGTAGAGA
TAGAAGTGACAGGACCTCCTTTAGGTGATGATGGTGAAGAATTCACAGTC
AAAACAGTTCGAACGAATCCAAGCAAAACTGGAGTTGTTACTGGTAACGC
AACGTATGCATCCTTCTTCCAAAGTCTAAGGCGTGCATATGGAAAAGGTG
GTGGTATCCATttatgctgaATGCATGAAAAGAAAAGAGTTGGAATAGTT
GGTTACGGCCATATAgGTCAATACATTTTTGACGAAGTTCAAAAAAGTGA
AGACTTGTGTGTTGACTTTGTGTGGAATAGATCCTTTGACAAAATCAAAC
ATCTTCCAAAAGAAGCTCAACTTGAAAATCTTGATGAATTTAGAACGAGA
AAGGTTGACATCATCTTAGAAGTTGCACATATCACAACAACTCAAAAATA
TGGAGAACAATTTTTAGAACATGCAAATTTTATGATAGGATCTCCTACTG
CTTTGGCTGATGAGGATCTTGAAACCAGACTGAGAAAGAAATCCATAGAA
ACTGGTTATGGATTGTTTGTTCCTGCTGGTGCATTTTGGGGTGGTGAAGA
TGTACAAAAGATGGCTGATCAAGGGTCATTGAAGGGTTTGAGAGTGACAA
TGAAAAAACATCCATCTTGTTTCAAAGTCCTTGGCAAAGTAGCTGAAAGG
AATGAAAAGGTTGGAGATGAACCTGTTGTATTATACGAAGGTCCAGTTCG
AAAGCTTTGTCCGTTGGCACCTGCTAATGTAAACACGATGGCCTGTGCTG
CACTAGCGGCACATAATCTAGGTTTTGATAAAGTTCAAGGATGTCTTGTA
GCTGATCGAAGtttgaaaTGCCACATAGTAGAGATAGAAGTGACAGGACC
TCCTTTAGGTGATGATGGTGAAGAATTCACAGTCAAAACAGTTCGAACGA
ATCCAAGCAAAACTGGAGTTGTTACTGGTAACGCAACGTATGCATCCTTC
TTCCAAAGTCTAAGGCGTGCATATGGAAAAGGTGGTGGTATCCATttatg
ctgaATGCATGAAAAGAAAAGAGTTGGAATAGTTGGTTACGGCCATATAg
GTCAATACATTTTTGACGAAGTTCAAAAAAGTGAAGACTTGTGTGTTGAC
TTTGTGTGGAATAGATCCTTTGACAAAATCAAACATCTTCCAAAAGAAGC
TCAACTTGAAAATCTTGATGAATTTAGAACGAGAAAGGTTGACATCATCT
TAGAAGTTGCACATATCACAACAACTCAAAAATATGGAGAACAATTTTTA
GAACATGCAAATTTTATGATAGGATCTCCTACTGCTTTGGCTGATGAGGA
TCTTGAAACCAGACTGAGAAAGAAATCCATAGAAACTGGTTATGGATTGT
TTGTTCCTGCTGGTGCATTTTGGGGTGGTGAAGATGTACAAAAGATGGCT
GATCAAGGGTCATTGAAGGGTTTGAGAGTGACAATGAAAAAACATCCATC
TTGTTTCAAAGTCCTTGGCAAAGTAGCTGAAAGGAATGAAAAGGTTGGAG
ATGAACCTGTTGTATTATACGAAGGTCCAGTTCGAAAGCTTTGTCCGTTG
GCACCTGCTAATGTAAACACGATGGCCTGTGCTGCACTAGCGGCACATAA
TCTAGGTTTTGATAAAGTTCAAGGATGTCTTGTAGCTGATCGAAGtttga
aaTGCCACATAGTAGAGATAGAAGTGACAGGACCTCCTTTAGGTGATGAT
GGTGAAGAATTCACAGTCAAAACAGTTCGAACGAATCCAAGCAAAACTGG
AGTTGTTACTGGTAACGCAACGTATGCATCCTTCTTCCAAAGTCTAAGGC
GTGCATATGGAAAAGGTGGTGGTATCCATttatgctgaATGCATGAAAAG
AAAAGAGTTGGAATAGTTGGTTACGGCCATATAgGTCAATACATTTTTGA
CGAAGTTCAAAAAAGTGAAGACTTGTGTGTTGACTTTGTGTGGAATAGAT
CCTTTGACAAAATCAAACATCTTCCAAAAGAAGCTCAACTTGAAAATCTT
GATGAATTTAGAACGAGAAAGGTTGACATCATCTTAGAAGTTGCACATAT
CACAACAACTCAAAAATATGGAGAACAATTTTTAGAACATGCAAATTTTA
TGATAGGATCTCCTACTGCTTTGGCTGATGAGGATCTTGAAACCAGACTG
AGAAAGAAATCCATAGAAACTGGTTATGGATTGTTTGTTCCTGCTGGTGC
ATTTTGGGGTGGTGAAGATGTACAAAAGATGGCTGATCAAGGGTCATTGA
AGGGTTTGAGAGTGACAATGAAAAAACATCCATCTTGTTTCAAAGTCCTT
GGCAAAGTAGCTGAAAGGAATGAAAAGGTTGGAGATGAACCTGTTGTATT
ATACGAAGGTCCAGTTCGAAAGCTTTGTCCGTTGGCACCTGCTAATGTAA
ACACGATGGCCTGTGCTGCACTAGCGGCACATAATCTAGGTTTTGATAAA
GTTCAAGGATGTCTTGTAGCTGATCGAAGtttgaaaTGCCACATAGTAGA
GATAGAAGTGACAGGACCTCCTTTAGGTGATGATGGTGAAGAATTCACAG
TCAAAACAGTTCGAACGAATCCAAGCAAAACTGGAGTTGTTACTGGTAAC
GCAACGTATGCATCCTTCTTCCAAAGTCTAAGGCGTGCATATGGAAAAGG
TGGTGGTATCCATttatgctgaATGCATGAAAAGAAAAGAGTTGGAATAG
TTGGTTACGGCCATATAgGTCAATACATTTTTGACGAAGTTCAAAAAAGT
GAAGACTTGTGTGTTGACTTTGTGTGGAATAGATCCTTTGACAAAATCAA
ACATCTTCCAAAAGAAGCTCAACTTGAAAATCTTGATGAATTTAGAACGA
GAAAGGTTGACATCATCTTAGAAGTTGCACATATCACAACAACTCAAAAA
TATGGAGAACAATTTTTAGAACATGCAAATTTTATGATAGGATCTCCTAC
TGCTTTGGCTGATGAGGATCTTGAAACCAGACTGAGAAAGAAATCCATAG
AAACTGGTTATGGATTGTTTGTTCCTGCTGGTGCATTTTGGGGTGGTGAA
GATGTACAAAAGATGGCTGATCAAGGGTCATTGAAGGGTTTGAGAGTGAC
AATGAAAAAACATCCATCTTGTTTCAAAGTCCTTGGCAAAGTAGCTGAAA
GGAATGAAAAGGTTGGAGATGAACCTGTTGTATTATACGAAGGTCCAGTT
CGAAAGCTTTGTCCGTTGGCACCTGCTAATGTAAACACGATGGCCTGTGC
TGCACTAGCGGCACATAATCTAGGTTTTGATAAAGTTCAAGGATGTCTTG
TAGCTGATCGAAGtttgaaaTGCCACATAGTAGAGATAGAAGTGACAGGA
CCTCCTTTAGGTGATGATGGTGAAGAATTCACAGTCAAAACAGTTCGAAC
GAATCCAAGCAAAACTGGAGTTGTTACTGGTAACGCAACGTATGCATCCT
TCTTCCAAAGTCTAAGGCGTGCATATGGAAAAGGTGGTGGTATCCATtta
tgctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012074XLOC_012074Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021531-exon-sc0000389-1491911889:154792..154923TCONS_00021531-exon-sc0000389-1491911889:154792..154923Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:154792..154923TCONS_00021531-exon-sc0000389-1510915933:154792..154923Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:154792..154923TCONS_00021531-exon-sc0000389-1575043694:154792..154923Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:155171..155254TCONS_00021531-exon-sc0000389-1491911889:155171..155254Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:155171..155254TCONS_00021531-exon-sc0000389-1510915933:155171..155254Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:155171..155254TCONS_00021531-exon-sc0000389-1575043694:155171..155254Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:155726..155774TCONS_00021531-exon-sc0000389-1491911889:155726..155774Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:155726..155774TCONS_00021531-exon-sc0000389-1510915933:155726..155774Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:155726..155774TCONS_00021531-exon-sc0000389-1575043694:155726..155774Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:155987..156071TCONS_00021531-exon-sc0000389-1491911889:155987..156071Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:155987..156071TCONS_00021531-exon-sc0000389-1510915933:155987..156071Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:155987..156071TCONS_00021531-exon-sc0000389-1575043694:155987..156071Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:156336..156485TCONS_00021531-exon-sc0000389-1491911889:156336..156485Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:156336..156485TCONS_00021531-exon-sc0000389-1510915933:156336..156485Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:156336..156485TCONS_00021531-exon-sc0000389-1575043694:156336..156485Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:157067..157172TCONS_00021531-exon-sc0000389-1491911889:157067..157172Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:157067..157172TCONS_00021531-exon-sc0000389-1510915933:157067..157172Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:157067..157172TCONS_00021531-exon-sc0000389-1575043694:157067..157172Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:157292..157412TCONS_00021531-exon-sc0000389-1491911889:157292..157412Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:157292..157412TCONS_00021531-exon-sc0000389-1510915933:157292..157412Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:157292..157412TCONS_00021531-exon-sc0000389-1575043694:157292..157412Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:157794..157948TCONS_00021531-exon-sc0000389-1491911889:157794..157948Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:157794..157948TCONS_00021531-exon-sc0000389-1510915933:157794..157948Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:157794..157948TCONS_00021531-exon-sc0000389-1575043694:157794..157948Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1491911889:158811..159009TCONS_00021531-exon-sc0000389-1491911889:158811..159009Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1510915933:158811..159009TCONS_00021531-exon-sc0000389-1510915933:158811..159009Clytia hemisphaericaexon
TCONS_00021531-exon-sc0000389-1575043694:158811..159009TCONS_00021531-exon-sc0000389-1575043694:158811..159009Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021531-proteinTCONS_00021531-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000389supercontigsc0000389:154792..159009 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
41.144	45.07	5.49394	1.7105	18.1124	5.02625	15.7788	14.4512	0.74637	9.22896	3.31637	5.35528	0.0038838	6.37654	6.96438	7.85037	14.9583	15.4738	6.20168	4.23702	10.1218	3.58125	22.5109	25.7852	3.20235	13.7537	15.271	0.12306	27.0755	23.6773
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005106Asp/hSer_DH_NAD-bd
IPR011182L-Asp_DH
IPR002811Asp_DH
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0050661NADP binding
GO:0033735aspartate dehydrogenase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009435NAD biosynthetic process
GO:0019363pyridine nucleotide biosynthetic process
GO:0006742NADP catabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009435 NAD biosynthetic process
biological_process GO:0006742 NADP catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019363 pyridine nucleotide biosynthetic process
molecular_function GO:0033735 aspartate dehydrogenase activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0016491 oxidoreductase activity
Blast
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BLAST of TCONS_00021531 vs. Swiss-Prot (Human)
Match: ASPD (Putative L-aspartate dehydrogenase OS=Homo sapiens GN=ASPDH PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 1.205e-66
Identity = 126/279 (45.16%), Postives = 169/279 (60.57%), Query Frame = 3 
Query:  102 RVGIVGYGHIGQYIFDEV--QKSE-DLCVDFVWNRSFDKIK-HLPKEAQLENLDEFRTRKVDIILEVAHITTTQKYGEQFLEHANFMIGSPTALADEDLETRLRKKSIETGYGLFVPAGAFWGGEDVQKMADQGSLKGLRVTMKKHPSCFKVLGKVAERNEKVGDEPVVLYEGPVRKLCPLAPANVNTMACAALAAHNLGFDKVQGCLVADRSLK-CHIVEIEVTGPPLGDDGEEFTVKTVRTNPSKTGVVTGNATYASFFQSLRRA--YGKGGGIHLC 917
            RVG+VGYG +GQ +   +  Q  E  L + FVWNR   ++   +P   QL+NL     R+ D+++EVAH     + G Q L HAN ++GSP+AL+D+  E +L + S    + +FV  GA WG ED++++   G L+ LRVTM  HP  F++ G +A  +        VLYEGPVR LCP AP N NTMA AALAA +LGFD V G LVAD SL   H+V++E++G P G  G  F V T R NP++ G VTG+AT  +F+QSL          GIHLC
Sbjct:    8 RVGVVGYGRLGQSLVSRLLAQGPELGLELVFVWNRDPGRMAGSVPPSLQLQNLAALGERRPDLVVEVAHPKIIHESGAQILRHANLLVGSPSALSDQTTERQLLEASQHWDHAVFVARGALWGAEDIRRLDAAGGLRSLRVTMATHPDGFRLEGPLAAAHSP--GPCTVLYEGPVRGLCPFAPRNSNTMAAAALAAPSLGFDGVIGVLVADTSLTDMHVVDVELSG-PRGPTGRSFAVHTRRENPAEPGAVTGSATVTAFWQSLLACCQLPSRPGIHLC 283
The following BLAST results are available for this feature:
BLAST of TCONS_00021531 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASPD1.205e-6645.16Putative L-aspartate dehydrogenase OS=Homo sapiens... [more]
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