TCONS_00021543 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021543
Unique NameTCONS_00021543
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1633

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021543 ID=TCONS_00021543|Name=TCONS_00021543|organism=Clytia hemisphaerica|type=transcript|length=1633bp
AGTTTCACTTTTGGTTGAGGGGAAAGGAGACGCTCTTGTGCAAATCCGTT
CCGATCTCAATTATTCTGTTGTCTTTCAACATGAGGTTTCAAGTATTGCA
CCACTACGAGGCTCTGAACAAGGTCGTACAAAACTTACAGTTGGTGGTCA
TGGTTTAAATGGACATCTTGTTGAAGTCATCATTGGTGTTTCTGTTTGTG
AAACTATCGAAAGTACGTACTCTCAACTGACGTGCTGGTCACCTGCTCAT
GCATCTGGCTCAGCAGATATCGAAGTCCAAGACAAAGGATACCAACTTGA
TGCGCAACAGACGGaaaccactttcactttcgtttacgATTCTACTTTAA
CACCAATTGCGAAACAAGAAACTATTCTCgGTAATGTTATGCAAGATGTT
GGCAATACGTTGAGAATCGGTGTGGAAGGTGGATCAACTACTCAATCTTA
TCAATTCCATTTCAATGATATCGTCATCCAAGGTACTGAAGTGGTGACAA
AAGAAGGCGATGTTTTCACATATTCAGATGCTTTTCTTCTCCCGCACGGT
GGCTACTCCATTCGTCTCTACATCGAGGGCAAAGGATATACTCAATTCAC
GCATAATGGCAAAACCCAGGATTTCTATCCTGGTGCAATTACGGGGAAGA
TTTCTTCGGTAACACCACCCCTGGGATCAAAGTATGGAGGAACGGAAATT
ACAATCAACGGATATGGTTTCCGTGGCGAAGGTGGTTCTTATCCGAATCG
TCAACCCGGCACCTCAGATATCGTGATCGCTCAATCGACAGTTACCATTG
GTGGAAAGCCTTGTCGAATCACATCAAAAACAATGACTCAAATCAAATGT
ATAACACCACCATCTGTTGATGAAGTATGTCCGAATTGCATGACGGGACC
GATTGAAGTTTCGGTTGATGACCAAATCAAATCGACGACCCATTTTGAAT
ATTCAGATGATGAATCACCAGAGATCAGTTCAGTTTCACCGACCACTGGA
AAGAGCGGTGATACGATCACTTTAACGGGAAACTTCCCACACAGCACAGG
AGTGAGTGTCAAGGTTGGAGTTTCAGAGTGTCAATCAGTGATCGTGGAAT
CATCCACAAAAATCACGTGTACCCTACAACACCATACAGCTGGAAATACA
ACTCTCAAAGTCCACATCGATAGTTCGGGTGATTCAAACAGCGTACCGTT
CGTATACGGTTTGAGTGGAAGTGTTTCTGGCTCACCGTTAAGTGGGTTCG
GTGGTGGAATTGAAGTGGTTATCAGTGGAACCGGCTATGGTGAAGATACT
ATGGTGACAATTTGTGATGTCGATTGCCCTGTCAAGAAAGATGAGGTGAC
TGTCACCAACATCAAGTGTTTATCTCCAGCGCAAGAAGGTCCCATTGATG
TTGCGATAACATGCGCTATCAAGATCTCAAGCGGTGAACAAGAACAGATC
TTATCAGCTCAATATCTATATGATCCATCAAAGACGTCCGTCGTTACAGA
CGTTTCTCCGTCACGTGTCGGAACTGGAGGAGGCGTCGACGTCACTTTCA
CCGGCACTGGTTTCGATACATCTCCTGTTAAGCCTGAAGTCACCATTGAT
GGAATCGAATGTCAAGTCAAATCTGTTTCTTCA
Run BLAST on NCBI

protein sequence of TCONS_00021543-protein

>TCONS_00021543-protein ID=TCONS_00021543-protein|Name=TCONS_00021543-protein|organism=Clytia hemisphaerica|type=polypeptide|length=544bp
VSLLVEGKGDALVQIRSDLNYSVVFQHEVSSIAPLRGSEQGRTKLTVGGH
GLNGHLVEVIIGVSVCETIESTYSQLTCWSPAHASGSADIEVQDKGYQLD
AQQTETTFTFVYDSTLTPIAKQETILGNVMQDVGNTLRIGVEGGSTTQSY
QFHFNDIVIQGTEVVTKEGDVFTYSDAFLLPHGGYSIRLYIEGKGYTQFT
HNGKTQDFYPGAITGKISSVTPPLGSKYGGTEITINGYGFRGEGGSYPNR
QPGTSDIVIAQSTVTIGGKPCRITSKTMTQIKCITPPSVDEVCPNCMTGP
IEVSVDDQIKSTTHFEYSDDESPEISSVSPTTGKSGDTITLTGNFPHSTG
VSVKVGVSECQSVIVESSTKITCTLQHHTAGNTTLKVHIDSSGDSNSVPF
VYGLSGSVSGSPLSGFGGGIEVVISGTGYGEDTMVTICDVDCPVKKDEVT
VTNIKCLSPAQEGPIDVAITCAIKISSGEQEQILSAQYLYDPSKTSVVTD
VSPSRVGTGGGVDVTFTGTGFDTSPVKPEVTIDGIECQVKSVSS
Run BLAST on NCBI

transcript from alignment at sc0000389:290830..295807+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021543 ID=TCONS_00021543|Name=TCONS_00021543|organism=Clytia hemisphaerica|type=transcript|length=4978bp|location=Sequence derived from alignment at sc0000389:290830..295807+ (Clytia hemisphaerica)
AGTTTCACTTTTGGTTGAGGGGAAAGGAGACGCTCTTGTGCAAATCCGTT
CCGATCTCAATTATTCTGTTGTCTTTCAACATGAGGTTTCAAGTGTAAGT
TTACATCACACATTTCACActgcttttaaaatttcatggtAAGAACGTCC
AGTTTTTAGACgttcaattttcaaaagttcCGATTCCCTTTATACCATAG
TATACAGCAACGATCAGACGACAAGCgatttttcttttcagagaTTGAAT
AGATCTTAAAAAAATAGGTTATTGTACGGTTGAAATcggttgaaattttt
tttgttaccTCATGTAATTCTTATAATTCTTATATATATAAaggtcggtc
tccactttcgcgcgaaatagGCGGCAGGTTtatcttaaccttttttgcct
gaagaaaagattacgtcataaaaaagtttcgcgcaaacaaaaaaaagttg
aaggaagttcaatccggttttttcatccgttacgtcaatttcgaccaatg
gctGCCAATGGAATTAATTGCTttatttttcaaccgaccaatgaccctac
aagaacgtcaaaaagttttcgctagTGTTGCTCGAAAgtagagaccggcc
ttaaaacttcaattgtttaatttttttccctCCATACAGATTGCACCACT
ACGAGGCTCTGAACAAGGTCGTACAAAACTTACAGTTGGTGGTCATGGTT
TAAATGGACATCTTGTTGAAGTCATCATTGGTGTTTCTGTTTGTGAAACT
ATCGAAAGTACGTACTCTCAACTGACGTGCTGGTCACCTGCTCATGCATC
TGGCTCAGCAGATATCGAAGTCCAAGACAAAGGATACCAACTTGATGCGC
AACAGACGGaaaccactttcactttcgtttacgATTCTACTTTAACACCA
ATTGCGAAACAAGAAACTATTCTCggtaaatgttttcaaaatgacTAATT
CTCCACCTTAATTTTCCTTGCCAAAATGAAGCATACCTTGTCGACCTTTT
TTAACGTAAGCCCTTAATTAAACGCCGGCCTCTTTTACCTCGGCCCTCAT
CACGCCAAAGCTCGTATTTTTTCCACTTTTAGCCCCGCCCTATTTTAATT
TCGATCCCTTACGATCCTTAAAAAAATACGCAACTGTGTCAAATCCACGC
CTTTATTGTGTCAAAAATGTCTATCGACCGAAAGTGTTTACCACTGACCT
GCATgaaccctggacaaagctatatcagccatctttgatcagattttttt
ttgaaagtggttacTTGCTTTATCAACATCATTACAAGTTCTCAAGGTAT
ATTGCTTTCGATGCATTTACCCCATTAGGGTATcacttgtaaaaaaaaac
tcaGATCAAAGATTTTATTTGACCGGGGTTGAGAAACTTGCTCCAGTGTT
TATATAAAGGTTATATATTCTCCATTTTTCCATATTATTATCATAGGTAA
TGTTATGCAAGATGTTGGCAATACGTTGAGAATCGGTGTGGAAGGTGGAT
CAACTACTCAATCTTATCAATTCCATTTCAATGATATCGTCATCCAAGGT
ACTGAAGTGGTGACAAAAGAAGGCGATGTTTTCACATATTCAGATGCTTT
TCTTCTCCCGCACGGTGGCTACTCCATTCGTCTCTACATCGAGGGCAAAG
GATATACTCAATTCACGCATAATGGCAAAACCCAGGATTTCTATCCTGGT
GCAATTACGGGGAAGATTTCTTCGGTAACACCACCCCTGGGATCAAAGTA
TGGAGGAACGGAAATTACAATCAACGGATATGGTTTCCGTGGCGAAGGTA
ATGTCATTTTAATGGGTTTTTGTCTGAATGGAAAAACAAACTTATTCGAG
TTAAGGGGGCACTCGAGtaattaaattttaattaaacTTTACAGGTGGTT
CTTATCCGAATCGTCAACCCGGCACCTCAGATATCGTGATCGCTCAATCG
ACAGTTACCATTGGTGGAAAGCCTTGTCGAATCACATCAAAAACAATGAC
TCAAATCAAATGTATAACACCACCATCTGTTGATGAAGTATGTCCGAATT
GCATGACGGGACCGATTGAAGTTTCGGTTGATGACCAAATCAAATCGACG
ACCCATTTTGAATATTCAGATGATGAATCACCAGAGATCAGTTCAGTTTC
ACCGACCACTGGAAAGAGCGGTGATACGATCACTTTAACGGGTAATGAGA
ACAAATGCTTCCCATTCAATTTACAAGAATTTCGTTGACCACCAGATTGA
ACATGTTGCATGGGCAAGGTTTAAGAAAATAAGAATGCAAGGAGATTCAA
TGCCTTAGTAGCAACCTGAATTATCGTTTATGATCTATTGGGATAATTCT
ACAAATCAATAGTTGGCTCACCATCTATTATTGTTGAAACATGGTTAAAT
ATACCTGATGGTATTTTATATTGTTTCTTTTCAGGAAACTTCCCACACAG
CACAGGAGTGAGTGTCAAGGTTGGAGTTTCAGAGTGTCAATCAGTGATCG
TGGAATCATCCACAAAAATCACGTGTACCCTACAACACCATACAGCTGGA
AATACAACTCTCAAAGTCCACATCGATGTACGTATGAGAGAGTTACTTCA
TAATTCGTTTTTCGACGTCTTGTGAGGTTAAGCTAAAGTcaattctctct
aattcgaatctctatttttcgaatttttgtaattcaaactgaaatattta
ttcCCTAAGCTGAACGAAAAGTGGCTTGAATTaccctctgtaattcgaat
atttctttaattcaaatgaaatttttggtcctttgaagatcaaattagag
agagtccactGCAATGTCACAAAGTTCTTGAAGAATTTTGATTTCGAAAA
GTATATATCATATCTATCTAATTATGCCGATGAAGTCACGAACGATGACG
AAAATTTCTACATAAGCAGTCGCTTCACTTCAGTTTGCTGGTTTTATAag
attcaagcctaaaaattatATCTTTCCCCTGAAGAGTGAAATATCGCTTT
TCGTAAGCATAACTTTTTTCCCTTTCCTAGAGTTCGGGTGATTCAAACAG
CGTACCGTTCGTATACGGTTTGAGTGGAAGTGTTTCTGGCTCACCGTTAA
GTGGGTTCGGTGGTGGAATTGAAGTGGTTATCAGTGGAACCGGCTATGGT
GAAGATACTATGGTGACAATTTGTGATGTCGATTGCCCTGTCAAGAAAGA
TGAGGTGACTGTCACCAACATCAAGTGTTTATCTCCAGCGCAAGAAGGTG
AAGAAAACTTGGTTTATTTAGACACTGGCCTCAGCCTTGGATACAAAATC
GATCACGGCCCAGGAATATCTTTGATCGGATTTTCTTTGATAgttgtacc
ctaatggtagcactactcgatAAGGGtgaacaaaattttaaacagaAAGT
CTCATTGAATTATAAATTAACCCACATCGAGTAGTCCTATGATCAAACTA
ATTAAAGATTAATTCTGTATGTTgagtaaacaaaacttttaggCTGTTTT
TTAACAaccatttatatttttacaatatATTTCGGATTTATTATTACAAA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGATCTTACATTTCAGGT
CCCATTGATGTTGCGATAACATGCGCTATCAAGATCTCAAGCGGTGAACA
AGAACAGATCTTATCAGCTCAATATCTATATGATCCATCAAAGACGTCCG
TCGTTACAGACGTTTCTCCGTCACGTGTCGGAACTGGAGGAGGCGTCGAC
GTCACTTTCACCGGCACTGGTATGTCgtctttgtttgttttctttttgac
aAGTATatctttcttcaatttctgtGAGATCTTTTGATGATATCATCAAT
ATTCTATTTGAAAGAACGTCAACTTCATGGCCTTAGTTCTTCTAGATTGA
AAACAGATTCTACACCCCTTTCATGGCAATTAGTTTTAAGCTCTGATTCA
GGGAGATTTTGCATGTAGTCCATCAGCTTAGCCTGGTGGAATAGAAACTA
TACGGCAATTGACTTATACATGATATGCACCTCTACAATGTCTTTAACAT
CACACCATAGACctaatagctgattggttgtaagtgacgtaaaaccaATC
ATTACGTCACTTACAATCAATCAGCTGTcggttccgtgatgtaatgatag
aagacattgcaatggtacatatcatgaattgatcTAGCATTTTGTCTCTT
CCAGGTTTCGATACATCTCCTGTTAAGCCTGAAGTCACCATTGATGGAAT
CGAATGTCAAGTCAAATCTGTTTCTTCA

Coding sequence (CDS) from alignment at sc0000389:290830..295807+

>TCONS_00021543 ID=TCONS_00021543|Name=TCONS_00021543|organism=Clytia hemisphaerica|type=CDS|length=13056bp|location=Sequence derived from alignment at sc0000389:290830..295807+ (Clytia hemisphaerica)
GTTTCACTTTTGGTTGAGGGGAAAGGAGACGCTCTTGTGCAAATCCGTTC
CGATCTCAATTATTCTGTTGTCTTTCAACATGAGGTTTCAAGTATTGCAC
CACTACGAGGCTCTGAACAAGGTCGTACAAAACTTACAGTTGGTGGTCAT
GGTTTAAATGGACATCTTGTTGAAGTCATCATTGGTGTTTCTGTTTGTGA
AACTATCGAAAGTACGTACTCTCAACTGACGTGCTGGTCACCTGCTCATG
CATCTGGCTCAGCAGATATCGAAGTCCAAGACAAAGGATACCAACTTGAT
GCGCAACAGACGGaaaccactttcactttcgtttacgATTCTACTTTAAC
ACCAATTGCGAAACAAGAAACTATTCTCgGTAATGTTATGCAAGATGTTG
GCAATACGTTGAGAATCGGTGTGGAAGGTGGATCAACTACTCAATCTTAT
CAATTCCATTTCAATGATATCGTCATCCAAGGTACTGAAGTGGTGACAAA
AGAAGGCGATGTTTTCACATATTCAGATGCTTTTCTTCTCCCGCACGGTG
GCTACTCCATTCGTCTCTACATCGAGGGCAAAGGATATACTCAATTCACG
CATAATGGCAAAACCCAGGATTTCTATCCTGGTGCAATTACGGGGAAGAT
TTCTTCGGTAACACCACCCCTGGGATCAAAGTATGGAGGAACGGAAATTA
CAATCAACGGATATGGTTTCCGTGGCGAAGGTGGTTCTTATCCGAATCGT
CAACCCGGCACCTCAGATATCGTGATCGCTCAATCGACAGTTACCATTGG
TGGAAAGCCTTGTCGAATCACATCAAAAACAATGACTCAAATCAAATGTA
TAACACCACCATCTGTTGATGAAGTATGTCCGAATTGCATGACGGGACCG
ATTGAAGTTTCGGTTGATGACCAAATCAAATCGACGACCCATTTTGAATA
TTCAGATGATGAATCACCAGAGATCAGTTCAGTTTCACCGACCACTGGAA
AGAGCGGTGATACGATCACTTTAACGGGAAACTTCCCACACAGCACAGGA
GTGAGTGTCAAGGTTGGAGTTTCAGAGTGTCAATCAGTGATCGTGGAATC
ATCCACAAAAATCACGTGTACCCTACAACACCATACAGCTGGAAATACAA
CTCTCAAAGTCCACATCGATAGTTCGGGTGATTCAAACAGCGTACCGTTC
GTATACGGTTTGAGTGGAAGTGTTTCTGGCTCACCGTTAAGTGGGTTCGG
TGGTGGAATTGAAGTGGTTATCAGTGGAACCGGCTATGGTGAAGATACTA
TGGTGACAATTTGTGATGTCGATTGCCCTGTCAAGAAAGATGAGGTGACT
GTCACCAACATCAAGTGTTTATCTCCAGCGCAAGAAGGTCCCATTGATGT
TGCGATAACATGCGCTATCAAGATCTCAAGCGGTGAACAAGAACAGATCT
TATCAGCTCAATATCTATATGATCCATCAAAGACGTCCGTCGTTACAGAC
GTTTCTCCGTCACGTGTCGGAACTGGAGGAGGCGTCGACGTCACTTTCAC
CGGCACTGGTTTCGATACATCTCCTGTTAAGCCTGAAGTCACCATTGATG
GAATCGAATGTCAAGTCAAATCTGTTTCTTCAGTTTCACTTTTGGTTGAG
GGGAAAGGAGACGCTCTTGTGCAAATCCGTTCCGATCTCAATTATTCTGT
TGTCTTTCAACATGAGGTTTCAAGTATTGCACCACTACGAGGCTCTGAAC
AAGGTCGTACAAAACTTACAGTTGGTGGTCATGGTTTAAATGGACATCTT
GTTGAAGTCATCATTGGTGTTTCTGTTTGTGAAACTATCGAAAGTACGTA
CTCTCAACTGACGTGCTGGTCACCTGCTCATGCATCTGGCTCAGCAGATA
TCGAAGTCCAAGACAAAGGATACCAACTTGATGCGCAACAGACGGaaacc
actttcactttcgtttacgATTCTACTTTAACACCAATTGCGAAACAAGA
AACTATTCTCgGTAATGTTATGCAAGATGTTGGCAATACGTTGAGAATCG
GTGTGGAAGGTGGATCAACTACTCAATCTTATCAATTCCATTTCAATGAT
ATCGTCATCCAAGGTACTGAAGTGGTGACAAAAGAAGGCGATGTTTTCAC
ATATTCAGATGCTTTTCTTCTCCCGCACGGTGGCTACTCCATTCGTCTCT
ACATCGAGGGCAAAGGATATACTCAATTCACGCATAATGGCAAAACCCAG
GATTTCTATCCTGGTGCAATTACGGGGAAGATTTCTTCGGTAACACCACC
CCTGGGATCAAAGTATGGAGGAACGGAAATTACAATCAACGGATATGGTT
TCCGTGGCGAAGGTGGTTCTTATCCGAATCGTCAACCCGGCACCTCAGAT
ATCGTGATCGCTCAATCGACAGTTACCATTGGTGGAAAGCCTTGTCGAAT
CACATCAAAAACAATGACTCAAATCAAATGTATAACACCACCATCTGTTG
ATGAAGTATGTCCGAATTGCATGACGGGACCGATTGAAGTTTCGGTTGAT
GACCAAATCAAATCGACGACCCATTTTGAATATTCAGATGATGAATCACC
AGAGATCAGTTCAGTTTCACCGACCACTGGAAAGAGCGGTGATACGATCA
CTTTAACGGGAAACTTCCCACACAGCACAGGAGTGAGTGTCAAGGTTGGA
GTTTCAGAGTGTCAATCAGTGATCGTGGAATCATCCACAAAAATCACGTG
TACCCTACAACACCATACAGCTGGAAATACAACTCTCAAAGTCCACATCG
ATAGTTCGGGTGATTCAAACAGCGTACCGTTCGTATACGGTTTGAGTGGA
AGTGTTTCTGGCTCACCGTTAAGTGGGTTCGGTGGTGGAATTGAAGTGGT
TATCAGTGGAACCGGCTATGGTGAAGATACTATGGTGACAATTTGTGATG
TCGATTGCCCTGTCAAGAAAGATGAGGTGACTGTCACCAACATCAAGTGT
TTATCTCCAGCGCAAGAAGGTCCCATTGATGTTGCGATAACATGCGCTAT
CAAGATCTCAAGCGGTGAACAAGAACAGATCTTATCAGCTCAATATCTAT
ATGATCCATCAAAGACGTCCGTCGTTACAGACGTTTCTCCGTCACGTGTC
GGAACTGGAGGAGGCGTCGACGTCACTTTCACCGGCACTGGTTTCGATAC
ATCTCCTGTTAAGCCTGAAGTCACCATTGATGGAATCGAATGTCAAGTCA
AATCTGTTTCTTCAGTTTCACTTTTGGTTGAGGGGAAAGGAGACGCTCTT
GTGCAAATCCGTTCCGATCTCAATTATTCTGTTGTCTTTCAACATGAGGT
TTCAAGTATTGCACCACTACGAGGCTCTGAACAAGGTCGTACAAAACTTA
CAGTTGGTGGTCATGGTTTAAATGGACATCTTGTTGAAGTCATCATTGGT
GTTTCTGTTTGTGAAACTATCGAAAGTACGTACTCTCAACTGACGTGCTG
GTCACCTGCTCATGCATCTGGCTCAGCAGATATCGAAGTCCAAGACAAAG
GATACCAACTTGATGCGCAACAGACGGaaaccactttcactttcgtttac
gATTCTACTTTAACACCAATTGCGAAACAAGAAACTATTCTCgGTAATGT
TATGCAAGATGTTGGCAATACGTTGAGAATCGGTGTGGAAGGTGGATCAA
CTACTCAATCTTATCAATTCCATTTCAATGATATCGTCATCCAAGGTACT
GAAGTGGTGACAAAAGAAGGCGATGTTTTCACATATTCAGATGCTTTTCT
TCTCCCGCACGGTGGCTACTCCATTCGTCTCTACATCGAGGGCAAAGGAT
ATACTCAATTCACGCATAATGGCAAAACCCAGGATTTCTATCCTGGTGCA
ATTACGGGGAAGATTTCTTCGGTAACACCACCCCTGGGATCAAAGTATGG
AGGAACGGAAATTACAATCAACGGATATGGTTTCCGTGGCGAAGGTGGTT
CTTATCCGAATCGTCAACCCGGCACCTCAGATATCGTGATCGCTCAATCG
ACAGTTACCATTGGTGGAAAGCCTTGTCGAATCACATCAAAAACAATGAC
TCAAATCAAATGTATAACACCACCATCTGTTGATGAAGTATGTCCGAATT
GCATGACGGGACCGATTGAAGTTTCGGTTGATGACCAAATCAAATCGACG
ACCCATTTTGAATATTCAGATGATGAATCACCAGAGATCAGTTCAGTTTC
ACCGACCACTGGAAAGAGCGGTGATACGATCACTTTAACGGGAAACTTCC
CACACAGCACAGGAGTGAGTGTCAAGGTTGGAGTTTCAGAGTGTCAATCA
GTGATCGTGGAATCATCCACAAAAATCACGTGTACCCTACAACACCATAC
AGCTGGAAATACAACTCTCAAAGTCCACATCGATAGTTCGGGTGATTCAA
ACAGCGTACCGTTCGTATACGGTTTGAGTGGAAGTGTTTCTGGCTCACCG
TTAAGTGGGTTCGGTGGTGGAATTGAAGTGGTTATCAGTGGAACCGGCTA
TGGTGAAGATACTATGGTGACAATTTGTGATGTCGATTGCCCTGTCAAGA
AAGATGAGGTGACTGTCACCAACATCAAGTGTTTATCTCCAGCGCAAGAA
GGTCCCATTGATGTTGCGATAACATGCGCTATCAAGATCTCAAGCGGTGA
ACAAGAACAGATCTTATCAGCTCAATATCTATATGATCCATCAAAGACGT
CCGTCGTTACAGACGTTTCTCCGTCACGTGTCGGAACTGGAGGAGGCGTC
GACGTCACTTTCACCGGCACTGGTTTCGATACATCTCCTGTTAAGCCTGA
AGTCACCATTGATGGAATCGAATGTCAAGTCAAATCTGTTTCTTCAGTTT
CACTTTTGGTTGAGGGGAAAGGAGACGCTCTTGTGCAAATCCGTTCCGAT
CTCAATTATTCTGTTGTCTTTCAACATGAGGTTTCAAGTATTGCACCACT
ACGAGGCTCTGAACAAGGTCGTACAAAACTTACAGTTGGTGGTCATGGTT
TAAATGGACATCTTGTTGAAGTCATCATTGGTGTTTCTGTTTGTGAAACT
ATCGAAAGTACGTACTCTCAACTGACGTGCTGGTCACCTGCTCATGCATC
TGGCTCAGCAGATATCGAAGTCCAAGACAAAGGATACCAACTTGATGCGC
AACAGACGGaaaccactttcactttcgtttacgATTCTACTTTAACACCA
ATTGCGAAACAAGAAACTATTCTCgGTAATGTTATGCAAGATGTTGGCAA
TACGTTGAGAATCGGTGTGGAAGGTGGATCAACTACTCAATCTTATCAAT
TCCATTTCAATGATATCGTCATCCAAGGTACTGAAGTGGTGACAAAAGAA
GGCGATGTTTTCACATATTCAGATGCTTTTCTTCTCCCGCACGGTGGCTA
CTCCATTCGTCTCTACATCGAGGGCAAAGGATATACTCAATTCACGCATA
ATGGCAAAACCCAGGATTTCTATCCTGGTGCAATTACGGGGAAGATTTCT
TCGGTAACACCACCCCTGGGATCAAAGTATGGAGGAACGGAAATTACAAT
CAACGGATATGGTTTCCGTGGCGAAGGTGGTTCTTATCCGAATCGTCAAC
CCGGCACCTCAGATATCGTGATCGCTCAATCGACAGTTACCATTGGTGGA
AAGCCTTGTCGAATCACATCAAAAACAATGACTCAAATCAAATGTATAAC
ACCACCATCTGTTGATGAAGTATGTCCGAATTGCATGACGGGACCGATTG
AAGTTTCGGTTGATGACCAAATCAAATCGACGACCCATTTTGAATATTCA
GATGATGAATCACCAGAGATCAGTTCAGTTTCACCGACCACTGGAAAGAG
CGGTGATACGATCACTTTAACGGGAAACTTCCCACACAGCACAGGAGTGA
GTGTCAAGGTTGGAGTTTCAGAGTGTCAATCAGTGATCGTGGAATCATCC
ACAAAAATCACGTGTACCCTACAACACCATACAGCTGGAAATACAACTCT
CAAAGTCCACATCGATAGTTCGGGTGATTCAAACAGCGTACCGTTCGTAT
ACGGTTTGAGTGGAAGTGTTTCTGGCTCACCGTTAAGTGGGTTCGGTGGT
GGAATTGAAGTGGTTATCAGTGGAACCGGCTATGGTGAAGATACTATGGT
GACAATTTGTGATGTCGATTGCCCTGTCAAGAAAGATGAGGTGACTGTCA
CCAACATCAAGTGTTTATCTCCAGCGCAAGAAGGTCCCATTGATGTTGCG
ATAACATGCGCTATCAAGATCTCAAGCGGTGAACAAGAACAGATCTTATC
AGCTCAATATCTATATGATCCATCAAAGACGTCCGTCGTTACAGACGTTT
CTCCGTCACGTGTCGGAACTGGAGGAGGCGTCGACGTCACTTTCACCGGC
ACTGGTTTCGATACATCTCCTGTTAAGCCTGAAGTCACCATTGATGGAAT
CGAATGTCAAGTCAAATCTGTTTCTTCAGTTTCACTTTTGGTTGAGGGGA
AAGGAGACGCTCTTGTGCAAATCCGTTCCGATCTCAATTATTCTGTTGTC
TTTCAACATGAGGTTTCAAGTATTGCACCACTACGAGGCTCTGAACAAGG
TCGTACAAAACTTACAGTTGGTGGTCATGGTTTAAATGGACATCTTGTTG
AAGTCATCATTGGTGTTTCTGTTTGTGAAACTATCGAAAGTACGTACTCT
CAACTGACGTGCTGGTCACCTGCTCATGCATCTGGCTCAGCAGATATCGA
AGTCCAAGACAAAGGATACCAACTTGATGCGCAACAGACGGaaaccactt
tcactttcgtttacgATTCTACTTTAACACCAATTGCGAAACAAGAAACT
ATTCTCgGTAATGTTATGCAAGATGTTGGCAATACGTTGAGAATCGGTGT
GGAAGGTGGATCAACTACTCAATCTTATCAATTCCATTTCAATGATATCG
TCATCCAAGGTACTGAAGTGGTGACAAAAGAAGGCGATGTTTTCACATAT
TCAGATGCTTTTCTTCTCCCGCACGGTGGCTACTCCATTCGTCTCTACAT
CGAGGGCAAAGGATATACTCAATTCACGCATAATGGCAAAACCCAGGATT
TCTATCCTGGTGCAATTACGGGGAAGATTTCTTCGGTAACACCACCCCTG
GGATCAAAGTATGGAGGAACGGAAATTACAATCAACGGATATGGTTTCCG
TGGCGAAGGTGGTTCTTATCCGAATCGTCAACCCGGCACCTCAGATATCG
TGATCGCTCAATCGACAGTTACCATTGGTGGAAAGCCTTGTCGAATCACA
TCAAAAACAATGACTCAAATCAAATGTATAACACCACCATCTGTTGATGA
AGTATGTCCGAATTGCATGACGGGACCGATTGAAGTTTCGGTTGATGACC
AAATCAAATCGACGACCCATTTTGAATATTCAGATGATGAATCACCAGAG
ATCAGTTCAGTTTCACCGACCACTGGAAAGAGCGGTGATACGATCACTTT
AACGGGAAACTTCCCACACAGCACAGGAGTGAGTGTCAAGGTTGGAGTTT
CAGAGTGTCAATCAGTGATCGTGGAATCATCCACAAAAATCACGTGTACC
CTACAACACCATACAGCTGGAAATACAACTCTCAAAGTCCACATCGATAG
TTCGGGTGATTCAAACAGCGTACCGTTCGTATACGGTTTGAGTGGAAGTG
TTTCTGGCTCACCGTTAAGTGGGTTCGGTGGTGGAATTGAAGTGGTTATC
AGTGGAACCGGCTATGGTGAAGATACTATGGTGACAATTTGTGATGTCGA
TTGCCCTGTCAAGAAAGATGAGGTGACTGTCACCAACATCAAGTGTTTAT
CTCCAGCGCAAGAAGGTCCCATTGATGTTGCGATAACATGCGCTATCAAG
ATCTCAAGCGGTGAACAAGAACAGATCTTATCAGCTCAATATCTATATGA
TCCATCAAAGACGTCCGTCGTTACAGACGTTTCTCCGTCACGTGTCGGAA
CTGGAGGAGGCGTCGACGTCACTTTCACCGGCACTGGTTTCGATACATCT
CCTGTTAAGCCTGAAGTCACCATTGATGGAATCGAATGTCAAGTCAAATC
TGTTTCTTCAGTTTCACTTTTGGTTGAGGGGAAAGGAGACGCTCTTGTGC
AAATCCGTTCCGATCTCAATTATTCTGTTGTCTTTCAACATGAGGTTTCA
AGTATTGCACCACTACGAGGCTCTGAACAAGGTCGTACAAAACTTACAGT
TGGTGGTCATGGTTTAAATGGACATCTTGTTGAAGTCATCATTGGTGTTT
CTGTTTGTGAAACTATCGAAAGTACGTACTCTCAACTGACGTGCTGGTCA
CCTGCTCATGCATCTGGCTCAGCAGATATCGAAGTCCAAGACAAAGGATA
CCAACTTGATGCGCAACAGACGGaaaccactttcactttcgtttacgATT
CTACTTTAACACCAATTGCGAAACAAGAAACTATTCTCgGTAATGTTATG
CAAGATGTTGGCAATACGTTGAGAATCGGTGTGGAAGGTGGATCAACTAC
TCAATCTTATCAATTCCATTTCAATGATATCGTCATCCAAGGTACTGAAG
TGGTGACAAAAGAAGGCGATGTTTTCACATATTCAGATGCTTTTCTTCTC
CCGCACGGTGGCTACTCCATTCGTCTCTACATCGAGGGCAAAGGATATAC
TCAATTCACGCATAATGGCAAAACCCAGGATTTCTATCCTGGTGCAATTA
CGGGGAAGATTTCTTCGGTAACACCACCCCTGGGATCAAAGTATGGAGGA
ACGGAAATTACAATCAACGGATATGGTTTCCGTGGCGAAGGTGGTTCTTA
TCCGAATCGTCAACCCGGCACCTCAGATATCGTGATCGCTCAATCGACAG
TTACCATTGGTGGAAAGCCTTGTCGAATCACATCAAAAACAATGACTCAA
ATCAAATGTATAACACCACCATCTGTTGATGAAGTATGTCCGAATTGCAT
GACGGGACCGATTGAAGTTTCGGTTGATGACCAAATCAAATCGACGACCC
ATTTTGAATATTCAGATGATGAATCACCAGAGATCAGTTCAGTTTCACCG
ACCACTGGAAAGAGCGGTGATACGATCACTTTAACGGGAAACTTCCCACA
CAGCACAGGAGTGAGTGTCAAGGTTGGAGTTTCAGAGTGTCAATCAGTGA
TCGTGGAATCATCCACAAAAATCACGTGTACCCTACAACACCATACAGCT
GGAAATACAACTCTCAAAGTCCACATCGATAGTTCGGGTGATTCAAACAG
CGTACCGTTCGTATACGGTTTGAGTGGAAGTGTTTCTGGCTCACCGTTAA
GTGGGTTCGGTGGTGGAATTGAAGTGGTTATCAGTGGAACCGGCTATGGT
GAAGATACTATGGTGACAATTTGTGATGTCGATTGCCCTGTCAAGAAAGA
TGAGGTGACTGTCACCAACATCAAGTGTTTATCTCCAGCGCAAGAAGGTC
CCATTGATGTTGCGATAACATGCGCTATCAAGATCTCAAGCGGTGAACAA
GAACAGATCTTATCAGCTCAATATCTATATGATCCATCAAAGACGTCCGT
CGTTACAGACGTTTCTCCGTCACGTGTCGGAACTGGAGGAGGCGTCGACG
TCACTTTCACCGGCACTGGTTTCGATACATCTCCTGTTAAGCCTGAAGTC
ACCATTGATGGAATCGAATGTCAAGTCAAATCTGTTTCTTCAGTTTCACT
TTTGGTTGAGGGGAAAGGAGACGCTCTTGTGCAAATCCGTTCCGATCTCA
ATTATTCTGTTGTCTTTCAACATGAGGTTTCAAGTATTGCACCACTACGA
GGCTCTGAACAAGGTCGTACAAAACTTACAGTTGGTGGTCATGGTTTAAA
TGGACATCTTGTTGAAGTCATCATTGGTGTTTCTGTTTGTGAAACTATCG
AAAGTACGTACTCTCAACTGACGTGCTGGTCACCTGCTCATGCATCTGGC
TCAGCAGATATCGAAGTCCAAGACAAAGGATACCAACTTGATGCGCAACA
GACGGaaaccactttcactttcgtttacgATTCTACTTTAACACCAATTG
CGAAACAAGAAACTATTCTCgGTAATGTTATGCAAGATGTTGGCAATACG
TTGAGAATCGGTGTGGAAGGTGGATCAACTACTCAATCTTATCAATTCCA
TTTCAATGATATCGTCATCCAAGGTACTGAAGTGGTGACAAAAGAAGGCG
ATGTTTTCACATATTCAGATGCTTTTCTTCTCCCGCACGGTGGCTACTCC
ATTCGTCTCTACATCGAGGGCAAAGGATATACTCAATTCACGCATAATGG
CAAAACCCAGGATTTCTATCCTGGTGCAATTACGGGGAAGATTTCTTCGG
TAACACCACCCCTGGGATCAAAGTATGGAGGAACGGAAATTACAATCAAC
GGATATGGTTTCCGTGGCGAAGGTGGTTCTTATCCGAATCGTCAACCCGG
CACCTCAGATATCGTGATCGCTCAATCGACAGTTACCATTGGTGGAAAGC
CTTGTCGAATCACATCAAAAACAATGACTCAAATCAAATGTATAACACCA
CCATCTGTTGATGAAGTATGTCCGAATTGCATGACGGGACCGATTGAAGT
TTCGGTTGATGACCAAATCAAATCGACGACCCATTTTGAATATTCAGATG
ATGAATCACCAGAGATCAGTTCAGTTTCACCGACCACTGGAAAGAGCGGT
GATACGATCACTTTAACGGGAAACTTCCCACACAGCACAGGAGTGAGTGT
CAAGGTTGGAGTTTCAGAGTGTCAATCAGTGATCGTGGAATCATCCACAA
AAATCACGTGTACCCTACAACACCATACAGCTGGAAATACAACTCTCAAA
GTCCACATCGATAGTTCGGGTGATTCAAACAGCGTACCGTTCGTATACGG
TTTGAGTGGAAGTGTTTCTGGCTCACCGTTAAGTGGGTTCGGTGGTGGAA
TTGAAGTGGTTATCAGTGGAACCGGCTATGGTGAAGATACTATGGTGACA
ATTTGTGATGTCGATTGCCCTGTCAAGAAAGATGAGGTGACTGTCACCAA
CATCAAGTGTTTATCTCCAGCGCAAGAAGGTCCCATTGATGTTGCGATAA
CATGCGCTATCAAGATCTCAAGCGGTGAACAAGAACAGATCTTATCAGCT
CAATATCTATATGATCCATCAAAGACGTCCGTCGTTACAGACGTTTCTCC
GTCACGTGTCGGAACTGGAGGAGGCGTCGACGTCACTTTCACCGGCACTG
GTTTCGATACATCTCCTGTTAAGCCTGAAGTCACCATTGATGGAATCGAA
TGTCAAGTCAAATCTGTTTCTTCAGTTTCACTTTTGGTTGAGGGGAAAGG
AGACGCTCTTGTGCAAATCCGTTCCGATCTCAATTATTCTGTTGTCTTTC
AACATGAGGTTTCAAGTATTGCACCACTACGAGGCTCTGAACAAGGTCGT
ACAAAACTTACAGTTGGTGGTCATGGTTTAAATGGACATCTTGTTGAAGT
CATCATTGGTGTTTCTGTTTGTGAAACTATCGAAAGTACGTACTCTCAAC
TGACGTGCTGGTCACCTGCTCATGCATCTGGCTCAGCAGATATCGAAGTC
CAAGACAAAGGATACCAACTTGATGCGCAACAGACGGaaaccactttcac
tttcgtttacgATTCTACTTTAACACCAATTGCGAAACAAGAAACTATTC
TCgGTAATGTTATGCAAGATGTTGGCAATACGTTGAGAATCGGTGTGGAA
GGTGGATCAACTACTCAATCTTATCAATTCCATTTCAATGATATCGTCAT
CCAAGGTACTGAAGTGGTGACAAAAGAAGGCGATGTTTTCACATATTCAG
ATGCTTTTCTTCTCCCGCACGGTGGCTACTCCATTCGTCTCTACATCGAG
GGCAAAGGATATACTCAATTCACGCATAATGGCAAAACCCAGGATTTCTA
TCCTGGTGCAATTACGGGGAAGATTTCTTCGGTAACACCACCCCTGGGAT
CAAAGTATGGAGGAACGGAAATTACAATCAACGGATATGGTTTCCGTGGC
GAAGGTGGTTCTTATCCGAATCGTCAACCCGGCACCTCAGATATCGTGAT
CGCTCAATCGACAGTTACCATTGGTGGAAAGCCTTGTCGAATCACATCAA
AAACAATGACTCAAATCAAATGTATAACACCACCATCTGTTGATGAAGTA
TGTCCGAATTGCATGACGGGACCGATTGAAGTTTCGGTTGATGACCAAAT
CAAATCGACGACCCATTTTGAATATTCAGATGATGAATCACCAGAGATCA
GTTCAGTTTCACCGACCACTGGAAAGAGCGGTGATACGATCACTTTAACG
GGAAACTTCCCACACAGCACAGGAGTGAGTGTCAAGGTTGGAGTTTCAGA
GTGTCAATCAGTGATCGTGGAATCATCCACAAAAATCACGTGTACCCTAC
AACACCATACAGCTGGAAATACAACTCTCAAAGTCCACATCGATAGTTCG
GGTGATTCAAACAGCGTACCGTTCGTATACGGTTTGAGTGGAAGTGTTTC
TGGCTCACCGTTAAGTGGGTTCGGTGGTGGAATTGAAGTGGTTATCAGTG
GAACCGGCTATGGTGAAGATACTATGGTGACAATTTGTGATGTCGATTGC
CCTGTCAAGAAAGATGAGGTGACTGTCACCAACATCAAGTGTTTATCTCC
AGCGCAAGAAGGTCCCATTGATGTTGCGATAACATGCGCTATCAAGATCT
CAAGCGGTGAACAAGAACAGATCTTATCAGCTCAATATCTATATGATCCA
TCAAAGACGTCCGTCGTTACAGACGTTTCTCCGTCACGTGTCGGAACTGG
AGGAGGCGTCGACGTCACTTTCACCGGCACTGGTTTCGATACATCTCCTG
TTAAGCCTGAAGTCACCATTGATGGAATCGAATGTCAAGTCAAATCTGTT
TCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012079XLOC_012079Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021543-exon-sc0000389-1491911889:290830..290923TCONS_00021543-exon-sc0000389-1491911889:290830..290923Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:290830..290923TCONS_00021543-exon-sc0000389-1510915933:290830..290923Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:290830..290923TCONS_00021543-exon-sc0000389-1575043694:290830..290923Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1491911889:291469..291754TCONS_00021543-exon-sc0000389-1491911889:291469..291754Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:291469..291754TCONS_00021543-exon-sc0000389-1510915933:291469..291754Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:291469..291754TCONS_00021543-exon-sc0000389-1575043694:291469..291754Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1491911889:292276..292626TCONS_00021543-exon-sc0000389-1491911889:292276..292626Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:292276..292626TCONS_00021543-exon-sc0000389-1510915933:292276..292626Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:292276..292626TCONS_00021543-exon-sc0000389-1575043694:292276..292626Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1491911889:292724..293020TCONS_00021543-exon-sc0000389-1491911889:292724..293020Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:292724..293020TCONS_00021543-exon-sc0000389-1510915933:292724..293020Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:292724..293020TCONS_00021543-exon-sc0000389-1575043694:292724..293020Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1491911889:293264..293406TCONS_00021543-exon-sc0000389-1491911889:293264..293406Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:293264..293406TCONS_00021543-exon-sc0000389-1510915933:293264..293406Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:293264..293406TCONS_00021543-exon-sc0000389-1575043694:293264..293406Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1491911889:293860..294076TCONS_00021543-exon-sc0000389-1491911889:293860..294076Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:293860..294076TCONS_00021543-exon-sc0000389-1510915933:293860..294076Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:293860..294076TCONS_00021543-exon-sc0000389-1575043694:293860..294076Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1491911889:295128..295298TCONS_00021543-exon-sc0000389-1491911889:295128..295298Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:295128..295298TCONS_00021543-exon-sc0000389-1510915933:295128..295298Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:295128..295298TCONS_00021543-exon-sc0000389-1575043694:295128..295298Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1491911889:295734..295807TCONS_00021543-exon-sc0000389-1491911889:295734..295807Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1510915933:295734..295807TCONS_00021543-exon-sc0000389-1510915933:295734..295807Clytia hemisphaericaexon
TCONS_00021543-exon-sc0000389-1575043694:295734..295807TCONS_00021543-exon-sc0000389-1575043694:295734..295807Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021543-proteinTCONS_00021543-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000389supercontigsc0000389:290830..295807 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.273854	0.548086	0.636509	1.38515	0.417355	0.764137	0.887412	0.268633	1.50856	1.40753	0.0228952	0	0	0	0.836358	1.76715	0	0	0	0.0259707	0.388938	1.04749	0	0.00933377	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002909IPT
IPR013783Ig-like_fold
IPR014756Ig_E-set
Blast
[Close]
BLAST of TCONS_00021543 vs. Swiss-Prot (Human)
Match: PKHL1 (Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.327e-20
Identity = 85/282 (30.14%), Postives = 124/282 (43.97%), Query Frame = 2 
Query:   62 YSVVFQHEVSSIAPLRGSEQGRTKLTVGGHGLNGHLVEVIIGVSVCETIESTYSQLTCWSPAHASGSADIEVQDKGYQLDAQQTETTFTFVYDSTLTPI-----AKQETILGNVM-----QDVGNTLRIGVE---GGSTTQSYQFHFNDIVIQGTEVVTKEGDVFTYSDAFLLPH---GGYSIRLYIEGKGYTQFTHNGKTQDFYPGAI--TGKISSVTPPLGSKYGGTEITINGYGFRGEGGSYPNRQPGTSDIVIAQSTVTIGGKPCRITSKTMTQIKCI 853
            +  V+Q ++S I P  GS  G T LT+ G G N +  +V++G   C  IE   +++TC +P    G+ DI V   G+Q  A+       F Y+   TPI      K  TILG V       + GN L   +    GG T Q   ++F DI                     LLP    G + I + +   G+        T+D    +I    +++S+ P  GS +GGTEITI G+GF                 + A++TV +G  PC +TS +   IKCI
Sbjct: 1149 FYFVYQSQISHIWPDSGSIAGGTLLTLSGFGFNEN-SKVLVGNETCNVIEGDLNRITCRTPKKTEGTVDISVTTNGFQATARD-----AFSYNCLQTPIITDFSPKVRTILGEVNLTIKGYNFGNELTQNMAVYVGGKTCQILHWNFTDIRC-------------------LLPKLSPGKHDIYVEVRNWGF------ASTRDKLNSSIQYVLEVTSMFPQRGSLFGGTEITIRGFGF---------------STIPAENTVLLGSIPCNVTSSSENVIKCI 1384

HSP 2 Score: 85.5001 bits (210), Expect = 3.445e-17
Identity = 123/519 (23.70%), Postives = 221/519 (42.58%), Query Frame = 2 
Query:    2 VSLLVEGKGDALVQIRSDLNYSVVFQHEVSSIAPLRGSEQGRTKLTVGGHGL--NGHLVEVIIGVSVCETIESTYSQLTCWSPAHASGSADIEVQDKGYQLDAQQTETTFTFVYDSTLTPIAKQETILGNVMQDVGNTLRIGVEG---GSTTQSYQFHFNDIVIQGTEVVTKEGDVFTYSDAFLLPHGGYSIRLYIEGKGYTQFTHNGKTQDFYPGAIT---GKISSVTPPLGSKYGGTEITINGYGFRGEGGSYPNRQPGTSDIVIAQSTVTIGGKPCRITSKTMTQIKCITPPSVDEVCPNCMTGPIEVS--VDDQIKSTTHFEYSDDESPEISSVSPTTGKSGDTITLTG-NFPHS-TGVSVKVGVSECQSVIVESSTKITCTLQHHTAGNTTLKVHIDSSGDSNS-VPFVYXXXXXXXXXXXXXXXXXIEVVISGTGYG-EDTMVTICDVDCPVKKDEVTVTNIKCLSPAQEGPIDVAITCAIKISSGEQEQILSAQYLYDPSKTSVVTDVSPSR 1516
            V+L V   G A+  + ++ +   V    +  + P  GS  G T +T+ G G   +   V+V++G   C+ +   Y+ + C +   A    D+++   G      Q +   TF Y  ++TP      I G     V  ++++ +EG   G+  +       +   +  EV   E ++        LP G +S+ + +  KG               G +T     ++S++P  GS  GGT + I G GF      YP             +TVTIG +PC+I S    ++ C TP           TG ++V   V+        F Y+ +++P +  + P+ G  G  I +TG NF      +SV +   +C +V + + + + C +  H  G   + +H  + G + S V F Y L+          FGGG  + ++GTG+  +++++ +C  +C + +     T + C  P+  G       C + + +G+        + Y  S T ++T VSP R
Sbjct: 1633 VTLTVYNLGTAINTLSNEFDRRFVLLPNIDLVLPNAGSTTGMTSVTIKGSGFAVSSAGVKVLMGHFPCKVLSVNYTAIECETSPAAQQLVDVDLLIHGV---PAQCQGNCTFSYLESITPY-----ITGVFPNSVIGSVKVLIEGEGLGTVLEDIAVFIGNQQFRAIEV--NENNITALVTP--LPVGHHSVSVVVGSKGLAL------------GNLTVSSPPVASLSPTSGSIGGGTTLVITGNGF------YP-----------GNTTVTIGDEPCQIISINPNEVYCRTPAGT--------TGMVDVKIFVNTIAYPPLLFTYALEDTPFLRGIIPSRGPPGTEIEITGSNFGFEILEISVMINNIQC-NVTMANDSVVQCIVGDHAGGTFPVMMHHKTKGSAMSTVVFEYPLNIQNINPSQGSFGGGQTMTVTGTGFNPQNSIILVCGSECAIDRLRSDYTTLLCEIPSNNG-TGAEQACEVSVVNGKDLSQSMTPFTYAVSLTPLITAVSPKR 2100
The following BLAST results are available for this feature:
BLAST of TCONS_00021543 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKHL12.327e-2030.14Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2[more]
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