TCONS_00021550 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021550
Unique NameTCONS_00021550
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1699

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021550 ID=TCONS_00021550|Name=TCONS_00021550|organism=Clytia hemisphaerica|type=transcript|length=1699bp
CTTTAGcgaaaaagaaacaaacaaaaaacgaaATAAAAGAGAACAATTTA
CATTATGAGCAGCAGATTTATTGACAATTCACCTCCAGTAACCAGACCAT
CACCGAGAAAAACAATGTGTCATGGCTCCAATATCAACCTCTATTCATCG
GTACATCAAAGTCAATGATAATGAACTTCCAATAAAACAACTGAAGAGAg
gacaacaaaaacaacaagacAACACCATGAGGAAGAGCAAGAGAAACAAA
ATAATAGCGCTCTCCATCATTGTGATGTTATTGATCTACGTCTTTCTAGC
TGGTGCACCTCACCTCATGCACGACGAAGAAGAACCAATAAGACCATATG
AGGAAAGATATAGAGATTTGAAAATGAGCGCACTCCATGGGAGGGATGTA
CCAGTTGTCATTGTTGACCAACATCAAGAAGtGATACCGTACTGGTACAA
AGCTATTGTCGAAGGTTTGATTCAGGCCAAAGGAAATACTATTATTCACA
TCGATGCGCATTCGGACACAGCTTCACCTTCTTTACTCAACAAACTCAAA
TACTTCCAACACAACAAAGTTCGCTTGGAACGTGACTTTCTTCCACTGAT
GGAATCCAACGATCGATTCATTTTCTCGTCAATTTATGAAGGTTTTGTGG
ATCGAGTCATATGGGTCAAACCTAGCTGGTTAAAGAACAATCAAACGTAC
CACACGAAAGGTTTCGTAGGTACTACAAAAATCAAAGGTTTAAAGGGCGA
TGTAGCGTGTACTTGCGAACGCCCATTACGTAATGGCTACGTAGCGGGCG
GTATGTATGATTGTATACGTGAGAACCCGTGGAATGTTTTGAACGCAACA
ACCATCCCATTAACGGATTGTAAGAAACTTCGGAATTTTGCCTTTATTGA
GATTTCCGAATCGAATTTTATTGAAGATATTACTTTTAAGAAGACTTTAA
GTGTGTTTGTTGACATAGATGAAGATTATTTTGGTTGCGAAAGTGGCGTT
GAAAATTTTATAGAACATGGTGTCTCATTAAAAACGCAAAAGGTTTTAGA
TGCCATTCTACCTGAATTGTATTCGCCGAAGAATTCTGAAGATGAGACTG
ACCTTaaccaaaaattgaaagaaatgttTCATAAAATCTCTGACATGTTT
TTGTATTTACACTTGAAGTCTGAACCAAAAGATACTCGAGCTGTCCGACA
AAAACTTAATGATGCAATCACTTCAATGACCGGGAAGTACTTTTTAAAAC
CGACAGCATTGCCGGAATTCGTCATTTTCTTATTGACTCTATCGCCGAAA
CAGATTGACAGTTTAtcgaaaatacatttttgtttGTCATCAAGTCAACG
GCTTTTAGGGAAGGACCAGCAAACGGAATTTTCAGTTTGTCATGGTAACG
TGTTTCCAAATAGTCGATTCGTGAAAGAATTTCATATAGGAACCGAAGCA
GATTTATATAAACGTGGTGAAAAACTTTCAGATATCTTACAGTATATAAG
ACAGACTGTACGCCCACGATTTTACACTATCGCGCGATCTTTACGTGACG
GATATGTCGTACGCGACCAACAACGAGAGATTGAAAAGTTGGTTATGAGA
GCAATCGATAAAGTTGAGCTTAATACTGGTCGTAGACGGAAAACTATTTA
TGATCCTTTCTTATTGTTTGGTAGGAAAGGTTGGATTTCTTGATGGTGA
Run BLAST on NCBI

protein sequence of TCONS_00021550-protein

>TCONS_00021550-protein ID=TCONS_00021550-protein|Name=TCONS_00021550-protein|organism=Clytia hemisphaerica|type=polypeptide|length=523bp
MAPISTSIHRYIKVNDNELPIKQLKRGQQKQQDNTMRKSKRNKIIALSII
VMLLIYVFLAGAPHLMHDEEEPIRPYEERYRDLKMSALHGRDVPVVIVDQ
HQEVIPYWYKAIVEGLIQAKGNTIIHIDAHSDTASPSLLNKLKYFQHNKV
RLERDFLPLMESNDRFIFSSIYEGFVDRVIWVKPSWLKNNQTYHTKGFVG
TTKIKGLKGDVACTCERPLRNGYVAGGMYDCIRENPWNVLNATTIPLTDC
KKLRNFAFIEISESNFIEDITFKKTLSVFVDIDEDYFGCESGVENFIEHG
VSLKTQKVLDAILPELYSPKNSEDETDLNQKLKEMFHKISDMFLYLHLKS
EPKDTRAVRQKLNDAITSMTGKYFLKPTALPEFVIFLLTLSPKQIDSLSK
IHFCLSSSQRLLGKDQQTEFSVCHGNVFPNSRFVKEFHIGTEADLYKRGE
KLSDILQYIRQTVRPRFYTIARSLRDGYVVRDQQREIEKLVMRAIDKVEL
NTGRRRKTIYDPFLLFGRKGWIS
Run BLAST on NCBI

transcript from alignment at sc0000389:98898..102135-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021550 ID=TCONS_00021550|Name=TCONS_00021550|organism=Clytia hemisphaerica|type=transcript|length=3238bp|location=Sequence derived from alignment at sc0000389:98898..102135- (Clytia hemisphaerica)
CTTTAGCGAAAAAGAAACAAACAAAAAACGAAATAAAAGAGAACAATTTA
CATTATGAGCAGCAGATTTATTGACAATTCACCTCCAGTAACCAGACCAT
CACCGAGAAAAACAATGTGTCATGGCTCCAATATCAACCTCTATTCATCG
GTATGTGCACGTTTTTTTTATAAGGACATGTAAAATTTCGCCTTCGGATG
TTTTTAAGTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAGAATGTTCTTA
TTTTTACCATTTTGTAAGTATTTTTGCCCAATTTCCTGAGAAATCGGGTG
TTTTAGAGTCTGCAAAGCCTTAAAATGTTCTTAACTTCTTCTTAATATCT
TTGGCATCGAAGCCGAATGCTCTTATATGGTTTGTTCTTGTATAAAAAAC
GTGTATTCGTCTCTAGTTAGACTATTGTTTTCTGAAAGTTATTAGTATCG
TAAACAGTATCGTATCGTATACAGTAAACCATGGTCCATGTTTTTTCTTC
AGTTTAAAACTCTTGAGACCAAAATATGGAAATTGAGTCACAAAATGCAT
AACAAAAATCACACAATATATATGATTTATAACGCTGTGATTCAATCGAT
TCTTTCAATTTTGGAGGGGTTTATAGATGTCTAGGTCATATTCGGAGCCT
TATGACTCATTTTTGAATTTTTGGATTCTGAAATCCTAAGGTTCTAAGTC
TAACATTAAAACACTATCCTTCCGACCTAAAAGTTAGACCTCTTACAATA
CGTTTGTGGTTATGAAAATGTCTCTAATATTATGAAAAGGATTGTAATTT
CATTTTTTCTAATGTTTCAGGTACATCAAAGTCAATGATAATGAACTTCC
AATAAAACAACTGAAGAGAGGACAACAAAAACAACAAGACAACACCATGA
GGAAGAGCAAGAGAAACAAAATAATAGCGCTCTCCATCATTGTGATGTTA
TTGATCTACGTCTTTCTAGCTGGTGCACCTCACCTCATGCACGACGAAGA
AGAACCAATAAGACCATATGAGGAAAGATATAGAGATTTGAAAATGAGCG
CACTCCATGGGAGGGATGTACCAGTTGTCATTGTTGACCAACATCAAGAA
GGTATCATAACGTGTTTTCGCTTTGGTTTTTGGTTCCTTCCTCCTGGTGG
TGTGATCCAAATGGTCTTTTAAGAGGAGATAAGAGCCTATAGTGTTGCAG
TGTCACCTGATTATAGAATTTTTTTAAAAATGAAGAAAGTAACAGGAATT
TTGGATAGGCGTTTATAATTTTCCATTGGTTAGCTTAAGTTACTATTCTT
TCAAGTATGTGAATTTCTTGCCTCCTCGTTGTAGACAAGAAAAGTACGAT
ACTGGCGAAATTAAATTTTTCTACACAGTTTTCAAAAAACTGTATATATA
TGAAAATCTAAAAATTTACAAAGGCTTTGAGATCCTAAGACTTACATAAC
CGATCTCAGGTGAAAAACATGTTCAATTGTTATACCCATCTTTTGTTTTT
TTCAGTGATACCGTACTGGTACAAAGCTATTGTCGAAGGTTTGATTCAGG
CCAAAGGAAATACTATTGTAAGAGTTATTTGAGTATATACAGCGCTAGCG
TAATTGCTAAAAAGTTCTTTAGGAACCTAAAGGCACAACTAAGAAACTAA
CTAATAGTAATACAGCTTTACTTTAAAGCAATAATGACCAAAATCAATCT
TTGAGTTTCAGTTGTGAACAAATAAGTTAAAACATTGCCTTCTTAATATT
TCTTGGAAATAAGAAGGGTCAGAGGGCTAGTCTGAGTACCAGATAAGGAG
TTTTTTCGTTAGAGAATAAAAGGAAACCTACTAGACGGCTTTTAATAAAT
CTTGCACTTTTTCGGACAGATTCACATCGATGCGCATTCGGACACAGCTT
CACCTTCTTTACTCAACAAACTCAAATACTTCCAACACAACAAAGTTCGC
TTGGAACGTGACTTTCTTCCACTGATGGAATCCAACGATCGATTCATTTT
CTCGTCAATTTATGAAGGTATATTTGTGTATGAGTGTATCCTTCTAAGCT
TTGAAGATATTTATGATAGCAACAAAAACCATATGGTAAAATCGTATTAC
TTAATCCTGCATTTTGCTGGCCTTTGGTATCTCAACATTAAAGTTCCATT
CTTTTCAATTTTATGCTTCCTTCTTCAAAGGTTTTGTGGATCGAGTCATA
TGGGTCAAACCTAGCTGGTTAAAGAACAATCAAACGTACCACACGAAAGG
TTTCGTAGGTACTACAAAAATCAAAGGTTTAAAGGGCGATGTAGCGTGTA
CTTGCGAACGCCCATTACGTAATGGCTACGTAGCGGGCGGTATGTATGAT
TGTATACGTGAGAACCCGTGGAATGTTTTGAACGCAACAACCATCCCATT
AACGGATTGTAAGAAACTTCGGAATTTTGCCTTTATTGAGATTTCCGAAT
CGAATTTTATTGAAGATATTACTTTTAAGAAGACTTTAAGTGTGTTTGTT
GACATAGATGAAGATTATTTTGGTTGCGAAAGTGGCGTTGAAAATTTTAT
AGAACATGGTGTCTCATTAAAAACGCAAAAGGTTTTAGATGCCATTCTAC
CTGAATTGTATTCGCCGAAGAATTCTGAAGATGAGACTGACCTTAACCAA
AAATTGAAAGAAATGTTTCATAAAATCTCTGACATGTTTTTGTATTTACA
CTTGAAGTCTGAACCAAAAGATACTCGAGCTGTCCGACAAAAACTTAATG
ATGCAATCACTTCAATGACCGGGAAGTACTTTTTAAAACCGACAGCATTG
CCGGAATTCGTCATTTTCTTATTGACTCTATCGCCGAAACAGATTGACAG
TTTATCGAAAATACATTTTTGTTTGTCATCAAGTCAACGGCTTTTAGGGA
AGGACCAGCAAACGGAATTTTCAGTTTGTCATGGTAACGTGTTTCCAAAT
AGTCGATTCGTGAAAGAATTTCATATAGGAACCGAAGCAGATTTATATAA
ACGTGGTGAAAAACTTTCAGATATCTTACAGTATATAAGACAGACTGTAC
GCCCACGATTTTACACTATCGCGCGATCTTTACGTGACGGATATGTCGTA
CGCGACCAACAACGAGAGATTGAAAAGTTGGTTATGAGAGCAATCGATAA
AGTTGAGCTTAATACTGGTCGTAGACGGAAAACTATTTATGATCCTTTCT
TATTGTTTGGTAGGAAAGGTTGGATTTCTTGATGGTGA

Coding sequence (CDS) from alignment at sc0000389:98898..102135-

>TCONS_00021550 ID=TCONS_00021550|Name=TCONS_00021550|organism=Clytia hemisphaerica|type=CDS|length=7860bp|location=Sequence derived from alignment at sc0000389:98898..102135- (Clytia hemisphaerica)
GTTTTGTGGATCGAGTCATATGGGTCAAACCTAGCTGGTTAAAGAACAAT
CAAACGTACCACACGAAAGGTTTCGTAGGTACTACAAAAATCAAAGGTTT
AAAGGGCGATGTAGCGTGTACTTGCGAACGCCCATTACGTAATGGCTACG
TAGCGGGCGGTATGTATGATTGTATACGTGAGAACCCGTGGAATGTTTTG
AACGCAACAACCATCCCATTAACGGATTGTAAGAAACTTCGGAATTTTGC
CTTTATTGAGATTTCCGAATCGAATTTTATTGAAGATATTACTTTTAAGA
AGACTTTAAGTGTGTTTGTTGACATAGATGAAGATTATTTTGGTTGCGAA
AGTGGCGTTGAAAATTTTATAGAACATGGTGTCTCATTAAAAACGCAAAA
GGTTTTAGATGCCATTCTACCTGAATTGTATTCGCCGAAGAATTCTGAAG
ATGAGACTGACCTTAACCAAAAATTGAAAGAAATGTTTCATAAAATCTCT
GACATGTTTTTGTATTTACACTTGAAGTCTGAACCAAAAGATACTCGAGC
TGTCCGACAAAAACTTAATGATGCAATCACTTCAATGACCGGGAAGTACT
TTTTAAAACCGACAGCATTGCCGGAATTCGTCATTTTCTTATTGACTCTA
TCGCCGAAACAGATTGACAGTTTATCGAAAATACATTTTTGTTTGTCATC
AAGTCAACGGCTTTTAGGGAAGGACCAGCAAACGGAATTTTCAGTTTGTC
ATGGTAACGTGTTTCCAAATAGTCGATTCGTGAAAGAATTTCATATAGGA
ACCGAAGCAGATTTATATAAACGTGGTGAAAAACTTTCAGATATCTTACA
GTATATAAGACAGACTGTACGCCCACGATTTTACACTATCGCGCGATCTT
TACGTGACGGATATGTCGTACGCGACCAACAACGAGAGATTGAAAAGTTG
GTTATGAGAGCAATCGATAAAGTTGAGCTTAATACTGGTCGTAGACGGAA
AACTATTTATGATCCTTTCTTATTGTTTGGTAGGAAAGGTTGGATTTCTT
GAATTCACATCGATGCGCATTCGGACACAGCTTCACCTTCTTTACTCAAC
AAACTCAAATACTTCCAACACAACAAAGTTCGCTTGGAACGTGACTTTCT
TCCACTGATGGAATCCAACGATCGATTCATTTTCTCGTCAATTTATGAAG
TGATACCGTACTGGTACAAAGCTATTGTCGAAGGTTTGATTCAGGCCAAA
GGAAATACTATTGTACATCAAAGTCAATGATAATGAACTTCCAATAAAAC
AACTGAAGAGAGGACAACAAAAACAACAAGACAACACCATGAGGAAGAGC
AAGAGAAACAAAATAATAGCGCTCTCCATCATTGTGATGTTATTGATCTA
CGTCTTTCTAGCTGGTGCACCTCACCTCATGCACGACGAAGAAGAACCAA
TAAGACCATATGAGGAAAGATATAGAGATTTGAAAATGAGCGCACTCCAT
GGGAGGGATGTACCAGTTGTCATTGTTGACCAACATCAAGAAGATGGCTC
CAATATCAACCTCTATTCATCGGTTTTGTGGATCGAGTCATATGGGTCAA
ACCTAGCTGGTTAAAGAACAATCAAACGTACCACACGAAAGGTTTCGTAG
GTACTACAAAAATCAAAGGTTTAAAGGGCGATGTAGCGTGTACTTGCGAA
CGCCCATTACGTAATGGCTACGTAGCGGGCGGTATGTATGATTGTATACG
TGAGAACCCGTGGAATGTTTTGAACGCAACAACCATCCCATTAACGGATT
GTAAGAAACTTCGGAATTTTGCCTTTATTGAGATTTCCGAATCGAATTTT
ATTGAAGATATTACTTTTAAGAAGACTTTAAGTGTGTTTGTTGACATAGA
TGAAGATTATTTTGGTTGCGAAAGTGGCGTTGAAAATTTTATAGAACATG
GTGTCTCATTAAAAACGCAAAAGGTTTTAGATGCCATTCTACCTGAATTG
TATTCGCCGAAGAATTCTGAAGATGAGACTGACCTTAACCAAAAATTGAA
AGAAATGTTTCATAAAATCTCTGACATGTTTTTGTATTTACACTTGAAGT
CTGAACCAAAAGATACTCGAGCTGTCCGACAAAAACTTAATGATGCAATC
ACTTCAATGACCGGGAAGTACTTTTTAAAACCGACAGCATTGCCGGAATT
CGTCATTTTCTTATTGACTCTATCGCCGAAACAGATTGACAGTTTATCGA
AAATACATTTTTGTTTGTCATCAAGTCAACGGCTTTTAGGGAAGGACCAG
CAAACGGAATTTTCAGTTTGTCATGGTAACGTGTTTCCAAATAGTCGATT
CGTGAAAGAATTTCATATAGGAACCGAAGCAGATTTATATAAACGTGGTG
AAAAACTTTCAGATATCTTACAGTATATAAGACAGACTGTACGCCCACGA
TTTTACACTATCGCGCGATCTTTACGTGACGGATATGTCGTACGCGACCA
ACAACGAGAGATTGAAAAGTTGGTTATGAGAGCAATCGATAAAGTTGAGC
TTAATACTGGTCGTAGACGGAAAACTATTTATGATCCTTTCTTATTGTTT
GGTAGGAAAGGTTGGATTTCTTGAATTCACATCGATGCGCATTCGGACAC
AGCTTCACCTTCTTTACTCAACAAACTCAAATACTTCCAACACAACAAAG
TTCGCTTGGAACGTGACTTTCTTCCACTGATGGAATCCAACGATCGATTC
ATTTTCTCGTCAATTTATGAAGTGATACCGTACTGGTACAAAGCTATTGT
CGAAGGTTTGATTCAGGCCAAAGGAAATACTATTGTACATCAAAGTCAAT
GATAATGAACTTCCAATAAAACAACTGAAGAGAGGACAACAAAAACAACA
AGACAACACCATGAGGAAGAGCAAGAGAAACAAAATAATAGCGCTCTCCA
TCATTGTGATGTTATTGATCTACGTCTTTCTAGCTGGTGCACCTCACCTC
ATGCACGACGAAGAAGAACCAATAAGACCATATGAGGAAAGATATAGAGA
TTTGAAAATGAGCGCACTCCATGGGAGGGATGTACCAGTTGTCATTGTTG
ACCAACATCAAGAAGATGGCTCCAATATCAACCTCTATTCATCGGTTTTG
TGGATCGAGTCATATGGGTCAAACCTAGCTGGTTAAAGAACAATCAAACG
TACCACACGAAAGGTTTCGTAGGTACTACAAAAATCAAAGGTTTAAAGGG
CGATGTAGCGTGTACTTGCGAACGCCCATTACGTAATGGCTACGTAGCGG
GCGGTATGTATGATTGTATACGTGAGAACCCGTGGAATGTTTTGAACGCA
ACAACCATCCCATTAACGGATTGTAAGAAACTTCGGAATTTTGCCTTTAT
TGAGATTTCCGAATCGAATTTTATTGAAGATATTACTTTTAAGAAGACTT
TAAGTGTGTTTGTTGACATAGATGAAGATTATTTTGGTTGCGAAAGTGGC
GTTGAAAATTTTATAGAACATGGTGTCTCATTAAAAACGCAAAAGGTTTT
AGATGCCATTCTACCTGAATTGTATTCGCCGAAGAATTCTGAAGATGAGA
CTGACCTTAACCAAAAATTGAAAGAAATGTTTCATAAAATCTCTGACATG
TTTTTGTATTTACACTTGAAGTCTGAACCAAAAGATACTCGAGCTGTCCG
ACAAAAACTTAATGATGCAATCACTTCAATGACCGGGAAGTACTTTTTAA
AACCGACAGCATTGCCGGAATTCGTCATTTTCTTATTGACTCTATCGCCG
AAACAGATTGACAGTTTATCGAAAATACATTTTTGTTTGTCATCAAGTCA
ACGGCTTTTAGGGAAGGACCAGCAAACGGAATTTTCAGTTTGTCATGGTA
ACGTGTTTCCAAATAGTCGATTCGTGAAAGAATTTCATATAGGAACCGAA
GCAGATTTATATAAACGTGGTGAAAAACTTTCAGATATCTTACAGTATAT
AAGACAGACTGTACGCCCACGATTTTACACTATCGCGCGATCTTTACGTG
ACGGATATGTCGTACGCGACCAACAACGAGAGATTGAAAAGTTGGTTATG
AGAGCAATCGATAAAGTTGAGCTTAATACTGGTCGTAGACGGAAAACTAT
TTATGATCCTTTCTTATTGTTTGGTAGGAAAGGTTGGATTTCTTGAATTC
ACATCGATGCGCATTCGGACACAGCTTCACCTTCTTTACTCAACAAACTC
AAATACTTCCAACACAACAAAGTTCGCTTGGAACGTGACTTTCTTCCACT
GATGGAATCCAACGATCGATTCATTTTCTCGTCAATTTATGAAGTGATAC
CGTACTGGTACAAAGCTATTGTCGAAGGTTTGATTCAGGCCAAAGGAAAT
ACTATTGTACATCAAAGTCAATGATAATGAACTTCCAATAAAACAACTGA
AGAGAGGACAACAAAAACAACAAGACAACACCATGAGGAAGAGCAAGAGA
AACAAAATAATAGCGCTCTCCATCATTGTGATGTTATTGATCTACGTCTT
TCTAGCTGGTGCACCTCACCTCATGCACGACGAAGAAGAACCAATAAGAC
CATATGAGGAAAGATATAGAGATTTGAAAATGAGCGCACTCCATGGGAGG
GATGTACCAGTTGTCATTGTTGACCAACATCAAGAAGATGGCTCCAATAT
CAACCTCTATTCATCGGTTTTGTGGATCGAGTCATATGGGTCAAACCTAG
CTGGTTAAAGAACAATCAAACGTACCACACGAAAGGTTTCGTAGGTACTA
CAAAAATCAAAGGTTTAAAGGGCGATGTAGCGTGTACTTGCGAACGCCCA
TTACGTAATGGCTACGTAGCGGGCGGTATGTATGATTGTATACGTGAGAA
CCCGTGGAATGTTTTGAACGCAACAACCATCCCATTAACGGATTGTAAGA
AACTTCGGAATTTTGCCTTTATTGAGATTTCCGAATCGAATTTTATTGAA
GATATTACTTTTAAGAAGACTTTAAGTGTGTTTGTTGACATAGATGAAGA
TTATTTTGGTTGCGAAAGTGGCGTTGAAAATTTTATAGAACATGGTGTCT
CATTAAAAACGCAAAAGGTTTTAGATGCCATTCTACCTGAATTGTATTCG
CCGAAGAATTCTGAAGATGAGACTGACCTTAACCAAAAATTGAAAGAAAT
GTTTCATAAAATCTCTGACATGTTTTTGTATTTACACTTGAAGTCTGAAC
CAAAAGATACTCGAGCTGTCCGACAAAAACTTAATGATGCAATCACTTCA
ATGACCGGGAAGTACTTTTTAAAACCGACAGCATTGCCGGAATTCGTCAT
TTTCTTATTGACTCTATCGCCGAAACAGATTGACAGTTTATCGAAAATAC
ATTTTTGTTTGTCATCAAGTCAACGGCTTTTAGGGAAGGACCAGCAAACG
GAATTTTCAGTTTGTCATGGTAACGTGTTTCCAAATAGTCGATTCGTGAA
AGAATTTCATATAGGAACCGAAGCAGATTTATATAAACGTGGTGAAAAAC
TTTCAGATATCTTACAGTATATAAGACAGACTGTACGCCCACGATTTTAC
ACTATCGCGCGATCTTTACGTGACGGATATGTCGTACGCGACCAACAACG
AGAGATTGAAAAGTTGGTTATGAGAGCAATCGATAAAGTTGAGCTTAATA
CTGGTCGTAGACGGAAAACTATTTATGATCCTTTCTTATTGTTTGGTAGG
AAAGGTTGGATTTCTTGAATTCACATCGATGCGCATTCGGACACAGCTTC
ACCTTCTTTACTCAACAAACTCAAATACTTCCAACACAACAAAGTTCGCT
TGGAACGTGACTTTCTTCCACTGATGGAATCCAACGATCGATTCATTTTC
TCGTCAATTTATGAAGTGATACCGTACTGGTACAAAGCTATTGTCGAAGG
TTTGATTCAGGCCAAAGGAAATACTATTGTACATCAAAGTCAATGATAAT
GAACTTCCAATAAAACAACTGAAGAGAGGACAACAAAAACAACAAGACAA
CACCATGAGGAAGAGCAAGAGAAACAAAATAATAGCGCTCTCCATCATTG
TGATGTTATTGATCTACGTCTTTCTAGCTGGTGCACCTCACCTCATGCAC
GACGAAGAAGAACCAATAAGACCATATGAGGAAAGATATAGAGATTTGAA
AATGAGCGCACTCCATGGGAGGGATGTACCAGTTGTCATTGTTGACCAAC
ATCAAGAAGATGGCTCCAATATCAACCTCTATTCATCGGTTTTGTGGATC
GAGTCATATGGGTCAAACCTAGCTGGTTAAAGAACAATCAAACGTACCAC
ACGAAAGGTTTCGTAGGTACTACAAAAATCAAAGGTTTAAAGGGCGATGT
AGCGTGTACTTGCGAACGCCCATTACGTAATGGCTACGTAGCGGGCGGTA
TGTATGATTGTATACGTGAGAACCCGTGGAATGTTTTGAACGCAACAACC
ATCCCATTAACGGATTGTAAGAAACTTCGGAATTTTGCCTTTATTGAGAT
TTCCGAATCGAATTTTATTGAAGATATTACTTTTAAGAAGACTTTAAGTG
TGTTTGTTGACATAGATGAAGATTATTTTGGTTGCGAAAGTGGCGTTGAA
AATTTTATAGAACATGGTGTCTCATTAAAAACGCAAAAGGTTTTAGATGC
CATTCTACCTGAATTGTATTCGCCGAAGAATTCTGAAGATGAGACTGACC
TTAACCAAAAATTGAAAGAAATGTTTCATAAAATCTCTGACATGTTTTTG
TATTTACACTTGAAGTCTGAACCAAAAGATACTCGAGCTGTCCGACAAAA
ACTTAATGATGCAATCACTTCAATGACCGGGAAGTACTTTTTAAAACCGA
CAGCATTGCCGGAATTCGTCATTTTCTTATTGACTCTATCGCCGAAACAG
ATTGACAGTTTATCGAAAATACATTTTTGTTTGTCATCAAGTCAACGGCT
TTTAGGGAAGGACCAGCAAACGGAATTTTCAGTTTGTCATGGTAACGTGT
TTCCAAATAGTCGATTCGTGAAAGAATTTCATATAGGAACCGAAGCAGAT
TTATATAAACGTGGTGAAAAACTTTCAGATATCTTACAGTATATAAGACA
GACTGTACGCCCACGATTTTACACTATCGCGCGATCTTTACGTGACGGAT
ATGTCGTACGCGACCAACAACGAGAGATTGAAAAGTTGGTTATGAGAGCA
ATCGATAAAGTTGAGCTTAATACTGGTCGTAGACGGAAAACTATTTATGA
TCCTTTCTTATTGTTTGGTAGGAAAGGTTGGATTTCTTGAATTCACATCG
ATGCGCATTCGGACACAGCTTCACCTTCTTTACTCAACAAACTCAAATAC
TTCCAACACAACAAAGTTCGCTTGGAACGTGACTTTCTTCCACTGATGGA
ATCCAACGATCGATTCATTTTCTCGTCAATTTATGAAGTGATACCGTACT
GGTACAAAGCTATTGTCGAAGGTTTGATTCAGGCCAAAGGAAATACTATT
GTACATCAAAGTCAATGATAATGAACTTCCAATAAAACAACTGAAGAGAG
GACAACAAAAACAACAAGACAACACCATGAGGAAGAGCAAGAGAAACAAA
ATAATAGCGCTCTCCATCATTGTGATGTTATTGATCTACGTCTTTCTAGC
TGGTGCACCTCACCTCATGCACGACGAAGAAGAACCAATAAGACCATATG
AGGAAAGATATAGAGATTTGAAAATGAGCGCACTCCATGGGAGGGATGTA
CCAGTTGTCATTGTTGACCAACATCAAGAAGATGGCTCCAATATCAACCT
CTATTCATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012083XLOC_012083Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021550-exon-sc0000389-1575043694:101986..102135TCONS_00021550-exon-sc0000389-1575043694:101986..102135Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1575043694:101035..101315TCONS_00021550-exon-sc0000389-1575043694:101035..101315Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1575043694:100569..100630TCONS_00021550-exon-sc0000389-1575043694:100569..100630Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1575043694:100119..100266TCONS_00021550-exon-sc0000389-1575043694:100119..100266Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1575043694:98898..99955TCONS_00021550-exon-sc0000389-1575043694:98898..99955Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1510915933:101986..102135TCONS_00021550-exon-sc0000389-1510915933:101986..102135Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1510915933:101035..101315TCONS_00021550-exon-sc0000389-1510915933:101035..101315Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1510915933:100569..100630TCONS_00021550-exon-sc0000389-1510915933:100569..100630Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1510915933:100119..100266TCONS_00021550-exon-sc0000389-1510915933:100119..100266Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1510915933:98898..99955TCONS_00021550-exon-sc0000389-1510915933:98898..99955Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1491911889:101986..102135TCONS_00021550-exon-sc0000389-1491911889:101986..102135Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1491911889:101035..101315TCONS_00021550-exon-sc0000389-1491911889:101035..101315Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1491911889:100569..100630TCONS_00021550-exon-sc0000389-1491911889:100569..100630Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1491911889:100119..100266TCONS_00021550-exon-sc0000389-1491911889:100119..100266Clytia hemisphaericaexon
TCONS_00021550-exon-sc0000389-1491911889:98898..99955TCONS_00021550-exon-sc0000389-1491911889:98898..99955Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021550-proteinTCONS_00021550-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000389supercontigsc0000389:98898..102135 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.07183	9.58947	3.20819	2.11006	14.9311	11.4943	8.14286	9.14216	3.79223	4.49846	6.17556	3.39355	5.30495	5.16388	4.67807	5.39753	8.84788	7.8413	5.8975	6.11834	6.51506	6.36686	9.88286	10.8465	7.61818	9.19468	5.22384	3.34501	8.21907	8.53548
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024131UPF0489
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021550 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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