TCONS_00021560 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021560
Unique NameTCONS_00021560
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2260

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021560 ID=TCONS_00021560|Name=TCONS_00021560|organism=Clytia hemisphaerica|type=transcript|length=2260bp
TcgattttgatttcatcctaAGATGAATTTTGGAAGGTGTTTCTAATAGA
AATTTCTAACAATAATTTTGTCGAATTTTCCTACTTTTATTCTGTATTCG
ATTGTATATTGTATGCATCTTTGCGTATTCTCTCTTGCCAGTTTTAGATC
CTTAAATTAATATGATCAAAAGACTTCTATTCAGCAAAGCGACCTTAGGA
ATTTTATTATGTAGTTGTTTGTTACTTGGCCTGGCATACTTCCAACCGGA
CGTCCGACATTCgatacaaaatttacaaaagagATTATGGATGGGATCAA
CAGTCAAGACGAAGCTTCATTTGCGTGACACCATTTTCAAGCATGCTGCC
GTGGCAACTGACAACAAGAAATGCAGTAAAATCGGAAGCCAGATACTTAA
AGATGGTGGATCAGCTGTAGATAGTGCGATTGCTTCAATGTTATGTTTAG
GTGTGATGAACCCACACAGTACAGGGATCGGTGGTGGAGGTTTCATGCTT
ATTTAcatgaaagagaaaaaagaagcACGTGTTATTGACTTTCGTGAAAG
TGCTCCTTCAAAAGCTCATGAAAATCTGTTCAAAGGAAATCCAGAAAACG
GCATTAGAGGTGGATTATCTGTGGGAATTCCCGGtgaattacgaggtatg
caatATGCCCATGAGTTGTATGGAAAACTACCATGGAAAAAGTTGTTTCA
ACCTGCCATCAAACTATGCAATGAAGGATATAAGATCACTGAATCATTGG
GAATTGCTCTGGATAAATGGAAAGATGATGTGATAAATGAGAGTTGTCTC
AGaaacCAGTACATTCAAAAGGGTAAAGCATTAAAAGCAGGAGACACAGT
GTACAACAAAGCGCTTGGGAAAACACTATCCATCTTGGCTGAAGCAGGAA
ATGCAGATCCTTTTTATAACGGTGAATTGACCTCAACTATCGTGAAAGAG
ATCAAAGCTCAAGGTGGTATAATctcaaagaaagatttgaaaaattatga
agcCATCTCAAGAGAACCTCTGGTTACTAAGCTAGGAGAAGATACGGTTG
TGACGTCACCACCACCTGCTAGTGGACCCATTTTGGCATACATACTAAAT
ATTCTGAAAGGATATAAAATGGACGAAAGTGATAACGTCAAAGACCCTTC
ACTGATCTATCATCGTTTTATTGAAGCGTTCAAATTCGCGTACGCGCGGC
GAACAGAGCTAGCCGATCCAGACCACGCCGAAGGGATTGATGATATTGTG
TTAGAACTAATGAACACTACATATGCCGAGTCAACTCgacaaaaaattga
tgacgaaCGTACGCATAAGCCGAGTTATTACGAGGTGAAGAACTCGGATA
AAGTGACGACGGGTACAACTCATTTAGTTGTGATCGGGCCACACGGAGAT
GCAGTGACTGTCATGAGTACGGTTAACGGATATTTGGGTGCGAAATTTCG
TTCATGTAAACTAGGCTTTATTTACAACAACGAGATGGATGACTTCAGCA
CACCAGGCTTGGCGAACGAGTTTGGTCTTCCACCTTCAGAAGTCAATTTT
ATCCAACCCAACAAACGGCCACTATCGAGTTCTGCACCTACATTGATCCT
AGATAAAGAATTCAATGTCAAATTAGCGATCGGTGGTTCAGGAGGATCCA
TCATCACCACAGCTGTTGCCCAGGTGATAATGAACAATTTATGGTTTGGA
ATGAGTATCCGTGATGCCATCCAACAGCCTCGTATTCATGCACAATGGGT
ACCTGACAACGTGTTCGCGGAAACGAGGATGCCTAATGAGACGGTCAACG
CTCTGCAAAAGAAAGGACATAATATGACAGTAACAGATGGAAGCCATGCG
GTCGTACAAGCCATTACACGTGtttcaaaacaatggaaacgAATCTGTCA
AAAAAGCAAAATCGCTGGAAGTGCTTTCAAAACGTTCTGTagaaactatt
tgaaaaatcaagttggatttttcgctgaatcagatTATCGAAAGGGTGGT
GAACCAGATGGTTTCTAACGGCAACCAGACAGTGTTGCTAAGCAACTGCA
GTTTGTTTCCTGGAAGCTCTGGAAACTATATTGTCACCGAGGGGATTTTA
CAACGATTTGATGATTAgggtaaaaataaaatatatagtataaaataaaa
taaaataaaaaatttataatgTTATTATTACCTACCCATTCTtatctaca
caatagacagctccaggttAGGAGTTCTACGCTCTCGATCGAAATGaaag
aagatatgac
Run BLAST on NCBI

transcript from alignment at sc0000389:195567..202672-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021560 ID=TCONS_00021560|Name=TCONS_00021560|organism=Clytia hemisphaerica|type=transcript|length=7106bp|location=Sequence derived from alignment at sc0000389:195567..202672- (Clytia hemisphaerica)
TCGATTTTGATTTCATCCTAAGATGAATTTTGGAAGGTGTTTCTAATAGA
AATTTCTAACAATAATTTTGTCGAATTTTCCTACTTTTATTCTGTATTCG
ATTGTATATTGTATGCATCTTTGCGTATTCTCTCTTGCCAGTTTTAGATC
CTTAAATTAATATGATCAAAAGACTTCTATTCAGCAAAGCGACCTTAGGA
ATTTTATTATGTAGTTGTTTGTTACTTGGCCTGGCATACTTCCAACCGGA
CGTCCGACATTCGATACAAAATTTACAAAAGAGATTATGGATGGGATCGT
AAGAATTTTTCTGATATTTTAAGTCATTTTCAGATTTTCTTTGGGTCGTG
AAAAAGGTTTAAACTGAAAGTACATTTTGAGACATGTTATTTCTAAAGTC
AACTTTTTTTAAAAGAAATCTCCTTCTTGTAGAGCTTACAACTAAGAAAG
ATTGAAATCAAGAATGGTCTAAAGCGTAGAAAATAATTCTGCCCCATGGA
AGGGTCATCCTTTTTATTATTTGATAACTAATCTTTGACCTACTAAATAA
TATTGTATTTGTGACCTTTCTAACAGAACAGTCAAGACGAAGCTTCATTT
GCGTGACACCATTTTCAAGCATGCTGCCGTGGCAACTGACAACAAGAAAT
GCAGTAAAATCGGAAGCCAGATACTTAAAGATGGTGGATCAGCTGTAGAT
AGTGCGATTGCTTCAATGTTATGTTTAGGTATTGATATGGTTTTTTCTCC
CACTACAACACCTGTCTCAGCCGCCTTTACCTTTCGCTGGCTGTTGCCGT
TCAGTTAGCTCTAGTTTAGACGGCTCACGTTTCGCCCTGCCTATTCTAAT
TGTAAGAGTAGGCACAATAAAGTGGACAGTTAACGTCTTTGCTAGAAAAG
GGTTGAAAGAAGACATTGCATTGACGTCAAAAGCCAACTTTCTGCCCACT
TTAAATCACAATTTGAATAGGCAGGGCGAAAAGTGGGCCGTCTAAACTTA
GAGCTTACGCTCTAAAATGCCTTTTTACCGGTCTTCCATTAACATGTCGT
AAATAAGAACTACAGTACCTCTTTTGTAACGAAAATATCTGAAGTCTAAG
AATAGTTGTCCACGAAGGCTAAGAGCTCTCAAATGGTGCAAAAATTATTT
CTTCAGTTTTTTAAATTGAACCCTAATAACAACCTCAAGTTATCTTTTTC
CCATTGCAGGTGTGATGAACCCACACAGTACAGGGATCGGTGGTGGAGGT
TTCATGCTTATTTACATGAAAGAGAAAAAAGAAGCACGTGTTATTGACTT
TCGTGAAAGTGCTCCTTCAAAAGCTCATGAAAATCTGTTCAAAGGAAATC
CAGAAAACGGCATTAGAGGTGAGTCTTATGTCTTATAAATCTTCATTTTA
GAAAAGATCTCACTACCGATCGGGAACACAGTGTTACACTCTTTCTGCTT
TATAAGTTTACAGGAAACATTTGGGCTTGGACCCATTATGCTTTCCATTT
TCAGCCTTTAATTATGCTTATTCATATGTTTAGAAAGTTTTTTCAAAACG
TCGAAAATTTTAGCTAATTTTCATTTTACCTTTACTTTTTACGATATAAC
AGATCATATTCTTACGTTTTATATCAAAGAACATTGTTTAAACGTGTTGA
AGTCAAAATATTCGTTGTCTACCTCCCTGTCTCATTGATCCCAATGTCAA
AAATTTGAATTATGAATTTTCCCAGCCTCGAGGTCTTCTCAACCAGTAAA
AAAGTATCAAATCAACAGCGTACATTCAACATACATATTACATTTTGGAA
AAATATTTTATGTGAACTGGATCAAAAAAGATTGTGTTTTCGTTTTATAC
CAGGTGGATTATCTGTGGGAATTCCCGGTGAATTACGAGGTATGCAATAT
GCCCATGAGTTGTATGGAAAACTACCATGGAAAAAGTTGTTTCAACCTGC
CATCAAACTATGCAATGAAGGATATAAGATCACTGAATCATTGGGAATTG
CTCTGGATAAATGGAAAGATGATGTGATAAATGAGAGTTGTCTCAGGTAA
GGTTTCCTCCATGGCGAAGTGACGTCACAATACAACATCTTTTAATATTT
TCAGACAAATTGAGCCCCCACCAAATCGAAGTCGCTACACGCTTGCTAGG
CCTGTAGATTCAGACTCGTTTTTTCTTTTTCATTCTCTTCGAGTTAAGTT
TATTGATTTCATTGGCGGTTAGATTATGTAATACAAAGTTGACTCGATGA
ACACCCACTTTAGCCCTTTCTTTGAATAAGATGGTCAGGGGCTTCCCTTA
TATACATGCTGCAATCCTCACTACAAGAATATGATACTATGATCTTCAGC
AACCCTTATTTCGGCTTCATCTAACGTTACGTGGACGTTAGATGGACTAT
GAAACAGCATTGTTATAATTATCCGCCGGATATATAAAGATCTTTGCTAT
CTGTTGCCTAAAGTCGAAGTACGCAATTTCCATTGCTATTTAATAATGGG
AAATCTTTTTAATTTTCAGAAACCAGTACATTCAAAAGGGTAAAGCATTA
AAAGCAGGAGACACAGTGTACAACAAAGCGCTTGGGAAAACACTATCCAT
CTTGGCTGAAGCAGGAAATGCAGATCCTTTTTATAACGGTGAATTGACCT
CAACTATCGTGAAAGAGATCAAAGCTCAAGGTGGTATAATCTCAAAGAAA
GATTTGAAAAATTATGAAGCCATCTCAAGAGAACCTCTGGTTACTAAGCT
AGGAGAAGATACGGTTGTGACGTCACCACCACCTGCTAGTGGACCCATTT
TGGCATACATACTAAATATTCTGAAAGGTATGCACTTCCTGTTGTTAGTG
TGGAGATGAAAAGATATTCAAGAGTCTCTTTTTTCAACAAGCACGAAACC
GCTATCTTGTTCAAATTCTATCAAAAGTTAGTCTCAGCTGCATATTATAC
TGTATTGAGACCGACTTCAGTTCGTCTCTTTCACCCGCTCATTACTCGCT
GTCATGTTTCGACGATCTTCTAACGTTTTTCTTAAATCGGCACGATGTTA
AATGGACGCAACAAAGCTGCCACCTCGAATGCATAACCTATGGTACCTTT
CTTCTTTCAGGATATAAAATGGACGAAAGTGATANTTATTGATTTCATTG
GCGGTTAGATTATGTAATACAAAGTTGACTCGATGAACACCCACTTTAGC
CCTTTCTTTGAATAAGATGGTCAGGGGTTTCCCTTATATAAATGCTGCAA
TCCTCACTACAAGAATACTCTGATCTTCAGCACCCCTTATTTCGGCTTCA
TCTAACGTTACGTGGACGTTAGATGGACTATTAAACAGCATTGTTATAAT
TATCCGCCGGATATATAAAGATCTTTGCTATCTGTTGCCTATTGTCGAAG
TACGCAATTTCCATTGCTATTTGATAATGGGAAATCTTTTTAATTTTCAG
AAACCAGTACATTCAAAAGGGTAAAGCATTAAAAGCAGGAGACACAGTGT
ACAACAAAGCGCTTGGGAAAACACTATCCATCTTGGCTGAAGCAGGAAAT
GCAGATCCTTTTTATAACGGTGAATTGACCTCAACTATCGTGAAAGAGAT
CAAAGCTCAAGGTGGTATAATCTCAAAGAAAGATTTGAAAAATTATGAAG
CCATCTCAAGAGAACCTCTGGTTACTAAGCTAGGAGAAGATACGGTTGTG
ACGTCACCACCACCTGCTAGTGGACCCATTTTGGCATACATACTAAATAT
TCTGAAAGGTATGCACTTCCTGTTGTTAGTGTGGAGATGAAAAGATATTC
AAGAGTCTCTTTTTTCAACAAGCACGAAACCGCTATCTTGTTCAAATTCT
ATCAAAAGTTAGTCTCAGCTGCATATTATACTGTATTGAGACCGACTTCA
GTTCGTCTCTTTCACCCGCTCATTACTCGCTGTCATGTTTCGACGATCTT
CTAACGTTTTTCTTAAATCGGCACGATGTTAAATGGACGCAACAAAGCTG
CCACCTCGAATGCATAACCTATGGTACCTTTCTTCTTTCAGGATATAAAA
TGGACGAAAGTGATAACGTCAAAGACCCTTCACTGATCTATCATCGTTTT
ATTGAAGCGTTCAAATTCGCGTACGCGCGGCGAACAGAGCTAGCCGATCC
AGACCACGCCGAAGGGATTGATGATATTGTGTTAGAACTAATGAACACTA
CATATGCCGAGTCAACTCGACAAAAAATTGATGACGAACGTACACATAAG
CCGAGTTATTNAACACTACATATGCCGAGTCAACTCGACAAAAAATTGAT
GACGAACGTACGCATAAGCCGAGTTATTACGAGGTGAAGAACTCGGATAA
AGTGACGACGGGTACAACTCATTTAGTTGTGATCGGGCCACACGGAGATG
CAGTGACTGTCATGAGTACGGTTAACGGATAGTAAGTTACCTTTTTGAAA
ATTTTATTGACTGGTTTTTTCGAACAACACTTTTGAAGTATCTTTCTTTG
GACTTTTAGATTTGATTCAATTATTTCTGGTATTGGTGGGGTAATTTTAT
GACACAAACCTTCATACCTAAGATAGGCTTAATAGTCATAGCCTTTCTGC
CGGGGGGTTTCTTTTCTTAAAATTTTCCAAAAGTAGGGGGCATAAGAAAA
CAATGGAAACACACGGGGTATATCAAAGGTTTTTGAAAAAATTTCCAAGG
GAAGAACTTTCTACTTTTCAACCAAAAGTTTTCTGTCATCTTTTAAGTTT
TAACATTTGCAAGTTTTTTTTCCTCCTTGAATCACATGCTGGATGACCCA
GGAGGAAACTATGGTTTTTTTTTATTTTCTTATCATATTTTTCTCTTTTA
TTCTATTTAACAGTTTGGGTGCGAAATTTCGTTCATGTAAACTAGGCTTT
ATTTACAACAACGAGATGGATGACTTCAGCACACCAGGCTTGGCGAACGA
GTTTGGTCTTCCACCTTCAGAAGTCAATTTTATCCAACCCAACAAACGGC
CACTATCGAGTTCTGCACCTACATTGATCCTAGATAAAGAATTCAATGTC
AAATTAGCGATCGGTGGTTCAGGAGGATCCATCATCACCACAGCTGTTGC
CCAGGTAACTGCCGCAGCGGAATCGTTCTATTTTCAGTACCTTTTATCTT
GAACAAAACACTGTATTCCTTGGCCAAAGTTGTGTGTTGATAAATATTAA
CACCCTTGTGTCACAGACTAACTGGGACACCAGCCCCACTGGAAGATTTT
GGCCAAAACTTCGTCCCCGTTGGGAAAAATGCCGTACATTTTCAGCCCGA
GTGGGAAATTGACTTTGACTTCATAAAAGGAATAAAGTTCACTTTTGATA
CAATTCAAAAAACTTTTTACAAGCAAACCAGGTTTCAAAACAACAATCTG
AATTCAGTTATTATGAGGCAAGTGCGTTTTTAAAGTCTATGTAATAATGA
GAAACATGACATAAACACTTGGAGATGACGTAATCTTTTAAGATACCCGA
GAGTTGGGCTAAAACTCATCAAATAACATCTAAATAAAAACTNTTAAGAT
ACCCGAGAGTTGGGCTAAAACTCATCAGATAACATCCAAATAAAAACTTT
TCCCATTTCTCAGGTGATAATGAACAATTTATGGTTTGGAATGAGTATCC
GTGATGCCATCCAACAGCCTCGTATTCATGCACAATGGGTACCTGACAAC
GTGTTCGCGGAAACGAGGATGCCTAATGAGACGGTCAACGCTCTGCAAAA
GAAAGGACATAATGTAAGTTATTAGTTTTTGTGTCTCATTAGACTGTAAG
ACAGTCGTTTTTTCGTACTCACAAATCGGGAAATAAGTCGAATAATAATA
ATAGTAATAATCTAGAAAAAAGCCGTGAGTTTAGTTTGGAAATAACGACA
CTAAGCGAACGTAGAGGGTTAACTGCAGTGTCATAGACGACTATTTTAAT
AGTCTAGTGTCTCATTGGCATTCATTTGATTCGGTGTTTTTGATTTTCTC
TTGGACGAAAAAGATAACGATTAAAAGTAATTAATACTTTGTTAGAGAGA
TTTGAAATCAGGCCTCAAAATAATAACTAAAATCTACGGTGGAGAGAAAA
AGGCTTGAACTTTTGATAGAATTCGAATGAAACGACGTTTTTGCGCTTGT
TGAAAAGATAATGAGGGTGGAATATTTTCAAAACAGAAAAAAAAAAAATA
GAAAAATGAACAGAAATATTAGAAAATTAGAAAATCTTCATTCTTAGAGG
GTCATCACTGTGAAGAAATTTCCAAAAACTATTTTTTCAGTCAAAAAATA
CAGCTTAAAATTTCTGACTGCTGGACTACTTTATAAAGAGGGTTTTTCTG
TCATTTTTTCATGATATTTTAGGTCAATCAGTGCGATATACTTTGGGTTA
ATATTTTTGAATAATTTTTTCACAGTGACAAATTTTAAGTTCAAAGAATT
ACAGCACAGTTCGCGAAGTTGATTTTTTTCTCTTCATTTTTCATCTTCAT
ATTCGAAATTTTTTTGGTTTCTTTCTATTTGGTAATATTCCGCTCTTGAT
TATCTTTCCAATGTGCACATAACCACTATACTAGTTCGAATTCTATCAAA
AGATACAGCAATCTTTGTCTCCGCTGCACAGGCTTTGTGTATCATTTGTA
TATTTTCATCCCTCGATAGATGACAGTAACAGATGGAAGCCATGCGGTCG
TACAAGCCATTACACGTGTTTCAAAACAATGGAAACGAATCTGTCAAAAA
AGCAAAATCGCTGGAAGTGCTTTCAAAACGTTCTGTAGAAACTATTTGAA
AAATCAAGTTGGATTTTTCGCTGAATCAGATTATCGAAAGGGTGGTGAAC
CAGATGGTTTCTAACGGCAACCAGACAGTGTTGCTAAGCAACTGCAGTTT
GTTTCCTGGAAGCTCTGGAAACTATATTGTCACCGAGGGGATTTTACAAC
GATTTGATGATTAGGGTAAAAATAAAATATATAGTATAAAATAAAATAAA
ATAAAAAATTTATAATGTTATTATTACCTACCCATTCTTATCTACACAAT
AGACAGCTCCAGGTTAGGAGTTCTACGCTCTCGATCGAAATGAAAGAAGA
TATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012088XLOC_012088Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021560-exon-sc0000389-1575043694:202375..202672TCONS_00021560-exon-sc0000389-1575043694:202375..202672Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:201945..202096TCONS_00021560-exon-sc0000389-1575043694:201945..202096Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:201305..201463TCONS_00021560-exon-sc0000389-1575043694:201305..201463Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:200627..200819TCONS_00021560-exon-sc0000389-1575043694:200627..200819Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:198915..199222TCONS_00021560-exon-sc0000389-1575043694:198915..199222Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:198472..198631TCONS_00021560-exon-sc0000389-1575043694:198472..198631Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:198242..198403TCONS_00021560-exon-sc0000389-1575043694:198242..198403Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:197569..197809TCONS_00021560-exon-sc0000389-1575043694:197569..197809Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:196910..197059TCONS_00021560-exon-sc0000389-1575043694:196910..197059Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1575043694:195567..196003TCONS_00021560-exon-sc0000389-1575043694:195567..196003Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:202375..202672TCONS_00021560-exon-sc0000389-1510915933:202375..202672Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:201945..202096TCONS_00021560-exon-sc0000389-1510915933:201945..202096Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:201305..201463TCONS_00021560-exon-sc0000389-1510915933:201305..201463Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:200627..200819TCONS_00021560-exon-sc0000389-1510915933:200627..200819Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:198915..199222TCONS_00021560-exon-sc0000389-1510915933:198915..199222Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:198472..198631TCONS_00021560-exon-sc0000389-1510915933:198472..198631Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:198242..198403TCONS_00021560-exon-sc0000389-1510915933:198242..198403Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:197569..197809TCONS_00021560-exon-sc0000389-1510915933:197569..197809Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:196910..197059TCONS_00021560-exon-sc0000389-1510915933:196910..197059Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1510915933:195567..196003TCONS_00021560-exon-sc0000389-1510915933:195567..196003Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:202375..202672TCONS_00021560-exon-sc0000389-1491911889:202375..202672Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:201945..202096TCONS_00021560-exon-sc0000389-1491911889:201945..202096Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:201305..201463TCONS_00021560-exon-sc0000389-1491911889:201305..201463Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:200627..200819TCONS_00021560-exon-sc0000389-1491911889:200627..200819Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:198915..199222TCONS_00021560-exon-sc0000389-1491911889:198915..199222Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:198472..198631TCONS_00021560-exon-sc0000389-1491911889:198472..198631Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:198242..198403TCONS_00021560-exon-sc0000389-1491911889:198242..198403Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:197569..197809TCONS_00021560-exon-sc0000389-1491911889:197569..197809Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:196910..197059TCONS_00021560-exon-sc0000389-1491911889:196910..197059Clytia hemisphaericaexon
TCONS_00021560-exon-sc0000389-1491911889:195567..196003TCONS_00021560-exon-sc0000389-1491911889:195567..196003Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000389supercontigsc0000389:195567..202672 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.62272	0.649373	0.528807	0.383226	4.31816	4.33328	16.0481	17.4456	3.34305	3.15005	9.83284	6.8506	7.93415	7.18029	6.58106	14.7811	9.66829	10.324	0.358564	0.288625	5.04117	4.97127	4.07756	4.22401	5.93269	7.53488	1.35994	0.684215	0.297587	0.293414
Blast
[Close]
BLAST of TCONS_00021560 vs. Swiss-Prot (Human)
Match: GGT1 (Glutathione hydrolase 1 proenzyme OS=Homo sapiens GN=GGT1 PE=1 SV=2)

HSP 1 Score: 443.351 bits (1139), Expect = 5.993e-146
Identity = 240/581 (41.31%), Postives = 343/581 (59.04%), Query Frame = 3 
Query:  285 LWMGSTVKTKLHLRDTIFKHAAVATDNKKCSKIGSQILKDGGSAVDSAIASMLCLGVMNPHSTGIGGGGFMLIYMKEKKEARVIDFRESAPSKAHENLFKGNPENGIRGGLSVGIPGELRGMQYAHELYGKLPWKKLFQPAIKLCNEGYKITESLGIALDKWKDDVINESCLRNQYIQKGKALKAGDTVYNKALGKTLSILAEAGNADPFYNGELTSTIVKEIKAQGGIISKKDLKNYEA-ISREPLVTKLGEDTVVTSPPPASGPILAYILNILKGYKMDESDNVKDPS---LIYHRFIEAFKFAYARRTELADPDHAEGIDDIVLELMNTTYAESTRQKIDDERTHKPSYYEVKNSDKVTTGTTHLVVIGPHGDAVTVMSTVNGYLGAKFRSCKLGFIYNNEMDDFSTPGLANEFGLPPSEVNFIQPNKRPLSSSAPTLILDKEFNVKLAXXXXXXXXXTTAVAQVIMNNLWFGMSIRDAIQQPRIHAQWVPDNVFAETRMPNETVNALQKKGHNMTVTDGSHAVVQAITRVSKQWKRICQKSKIAGSAFKTFCRNYLKNQVGFFAESDYRKGGEPDGF 2015
            LW+ S  K      + ++  AAVA D K+CSKIG   L+DGGSAVD+AIA++LC+G+MN HS GIGGG F+ IY    ++A VI+ RE AP  A   +F  + E   +GGLSV +PGE+RG + AH+ +G+LPW +LFQP+I+L  +G+ + + L  AL+  +  +  +  L   + +  K L+ G+ +    L  T   LA  G A  FYNG LT+ IVK+I+A GGI++ +DL NY A +   PL   LG+  +     P SGP+LA ILNILKGY     ++V+ P    L YHR +EAF+FAYA+RT L DP   + + ++V  + +  +A   R +I D+ TH  SYY+ +       GT HL V+   G AV+  ST+N Y G+K RS   G ++NNEMDDFS+P + NEFG+PPS  NFIQP K+PLSS  PT+++ ++  V++ +G +GG+ ITTA A  I+ NLWFG  ++ A+++PR+H Q +P+    E  +      AL+ + H+  +     AVVQAI R +  W                             A SD RKGGEP G+
Sbjct:   24 LWLPSASKEP---DNHVYTRAAVAADAKQCSKIGRDALRDGGSAVDAAIAALLCVGLMNAHSMGIGGGLFLTIYNSTTRKAEVINAREVAPRLAFATMFNSS-EQSQKGGLSVAVPGEIRGYELAHQRHGRLPWARLFQPSIQLARQGFPVGKGLAAALENKRTVIEQQPVLCEVFCRDRKVLREGERLTLPQLADTYETLAIEG-AQAFYNGSLTAQIVKDIQAAGGIVTAEDLNNYRAELIEHPLNISLGDVVLYMPSAPLSGPVLALILNILKGYNFSR-ESVESPEQKGLTYHRIVEAFRFAYAKRTLLGDPKFVD-VTEVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATSTINLYFGSKVRSPVSGILFNNEMDDFSSPSITNEFGVPPSPANFIQPGKQPLSSMCPTIMVGQDGQVRMVVGAAGGTQITTATALAIIYNLWFGYDVKRAVEEPRLHNQLLPNVTTVERNIDQAVTAALETRHHHTQIASTFIAVVQAIVRTAGGWA----------------------------AASDSRKGGEPAGY 569
The following BLAST results are available for this feature:
BLAST of TCONS_00021560 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GGT15.993e-14641.31Glutathione hydrolase 1 proenzyme OS=Homo sapiens ... [more]
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