TCONS_00021609 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00021609
Unique Name	TCONS_00021609
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2526

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000390:243906..254572-

transcript sequence

>TCONS_00021609 ID=TCONS_00021609|Name=TCONS_00021609|organism=Clytia hemisphaerica|type=transcript|length=2526bp
CAACGTGAGCTTGAAGTGCAACAGAGAAATATgAGAAACAGAATGGACAA
CAATGACATGATGAGAATCCCAGACTCCACTTGTCTTGAGATTGATGAAG
ATAACAATTATGGTGTTTTCATCTCCTTTGTCGAAGTGTACAATAACTCC
ATTTTTGATTTGCTTGATGACAGTTGCATCGATCCAATAAAGAATAGAAC
ACCATCGTCAAAAATTCTACGTGAGGATCAAAGAAGAAATATGTTTGTGT
ATGATTCTACTGAAGTTGAAGTGAAAAGTACTGAAGAAGCTTTTGATTTG
TTCTGGAAAGGCCAAAATAGAAGGAAGACTGCTCTTACTATGCTCAATGC
AGAATCAAGCAGAAGCCATTGTGTTTTCACAATCAGGCTTGTTCAAGCGC
CATTGGGTCCAAATGGAGACTCAATAATGAAGgaTCGTAATTTAATTGGT
ATCAGTCAGTTATCTTTGTGTGATTTGGCTGGATCAGAAAGAACCAGTCG
TACCAAAGCTGATGGTGATAGGATAAGACAAGCAGGGCACATCAACAATT
CTCTCATGACTTTGCGATCTTGCATCGAAACCTTACGAGAAAACCAAAAG
AGCCAAGAAAGTGGTGGCAATTCAAAGATGGTGCCATATCGTGACTCAAA
ACTTACACATCTTTACAAAAATTACTTTGATGGCGACGGGAAGGTTCGAA
TGATAGTTTGCTTGAATCCAAGTGCTGCTGACTTCGACGAAAGTGTGCAC
GTTGTGAAATTTGCTGAAATGACTCAGGAAGTGAAAGTCGCCAGATCAGA
GGGTGTCAAgtTTGATCTTGGACTTACACCTGGTAGAGGAAAAGCCAGCA
AGATGTTTAAGAATGTGGTGGAGGATGTGTCAGATGGATTAAGTAGTGAC
CTTGGAAGTCAAGAAGATTTGATGAGAACAGTTCAACAATTTGCTTCATG
GCCGTTATTAGAGCTCTCCTCATTCAATGACGCGACCACGCTTCCCAATC
TACTGCAATACTTAGAAGAAAGGATAAAACTGCGGCGAACCTTGTTTACC
GACTGGAAACAAAGACAGGACGAAGTCAGACAAATGATACTGCAACTTGA
ACAAGATAATATTGATCTAACGAAAGCACTGGACGATCAAAGATCTGTTC
TTGCTGACAGAGAAAGAGAAACAAAACAGTTCGAGAAGAAGATTCGAATT
TTGAATGAGAAATGCGATACATTACAAAGATCATCACAAACTTACGAAAC
TCAAAAACGACAAGTCGAAGTTGAGcttgaaaaaCAAAGAGAGCTTGTCC
ATAAAGAACGAACTGAGAAAATGAGACTGAAgcagGCATTGAGAGATCTA
ACATCTTCAGAAAGGCTTCGTTACGAAAAAGAAATGGATAAACGTGTAAA
ACAAACACAAATGGAAATGGAAGGACACATCTTTGAAAAATCCGAAAAAC
TCCGTCAACTTCGAAACGTCGTCCAACACTTGGATGTTCCTGCTGAGAAC
CAAGGCAAGGTGAAGAAATCGATAAGAGAAGAGGCACCTCTTCGAGCTTA
CCCACAAACGCCTGCTTCCGCCCCGCACCCAGCAGTTCACAAATCGTCAC
GTCGACCACCCATAGCTAACAAACCTCTGCATACACGTACGAAAACCACC
ACCAATGCAACGCCTCACGGAAAGAAGAAAGTTCGATCTCGATCACCTCC
ACCCTCTGCAGGAAGGAATAAAGATATTGCCCCAGTTCGCGCCAAACATC
GACGATCAAGATCTTCTGATTACTGGCTTGAACATAAACCCACGGAGACA
CTTGCTACTAATACCGTAATGCAGCCAAACTTGAAGAACAAAAAGACGGT
GGATATGCCAAAAGTTAAAGATTTCAAGcaCATTTGGAACATGCCATCAA
CACCGAACTACATCCTGACGCATCAAGAAGAAGATTCTTCCGGTGAAATC
GAAACTAAATTGATTAAGgGAGAAGTAATGAAAACTCGAGGAGGTGGTAC
TAGTGTTCAATTCACCGACATCGAGACTTTGAAGAAAACATTAGAAGCTA
AAGGTGGAATCCCCTCAACTCCTAAACCCCCGAAAACTAATACTAAAACt
aaaaaacgaaaatcagAAGGAGAAGACGAAGGAGCGAGTGATGATAGTTG
GACCAGCGTCGAAACTCGCTGTGCGGTTGGTATTGAAGGGCGACCAGGGA
CGTCACCAGGATTAACGCACCATGCCAAaaaatcgaaGCATTGAGTAATC
GCAGCATTGAAAATTTCGTTGGTGTGGATGAATAGGTAAATCAAATCGAT
TAAAGATGGTAGAAGTAGAAGAAATAAcgaaagaaaatgattgacgAATT
CGTCCTATCTGCTGATAGCTAATTATTCTAACCAAGACgataaaaatata
gaaatattttgaatattgattTAATTATCCTAATTTGCCCCTTGTATATT
TGtaatctatttctatttctttatttttaaaatacaatGTATATTTAACC
ACCTTTAACCTTCAGATCATATCGAC

Run BLAST on NCBI

transcript from alignment at sc0000390:243906..254572-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00021609 ID=TCONS_00021609|Name=TCONS_00021609|organism=Clytia hemisphaerica|type=transcript|length=10667bp|location=Sequence derived from alignment at sc0000390:243906..254572- (Clytia hemisphaerica)
CAACGTGAGCTTGAAGTGCAACAGAGAAATATGTAAGATATTATGAAAAT
AAACTGGAAGCAATTATTATTATGCAAGTAATTTTGATGATTTTTTTACA
AAAACGGTTTGTTAAAATGTTTCAATTATTGAAATTGTTCTCTCTAATAA
TTCCTGCATGTTCCAATTCACAGAGAATAGTTTGGATTTTAAGTCAACAC
CATTTTGAATTCTATGTAAATTTCCTTTACAGGAAATGTTGACTGACAAT
TTGTTCTTATTTTCTAGGAGAAACAGAATGGACAACAATGACATGATGAG
AATCCCAGACTCCACTTGTCTTGAGATTGATGAAGATAACAATTATGGTG
TTTTCATCTCCTTTGTCGAAGTGTACAATAACTCCATTTTTGATTTGCTT
GATGACAGTTGCATCGATCCAATAAAGAATAGGTATTTATCAAGCACAGG
ATTTTCTTGTTGGATATCAATTAATAACCAGGAGAAACTTAGATATAATC
CTTCAACTTTCGTGAAATTTGTACAGCATTTTCCTTAGGGTCAAAAGAAA
AGCTGGTATTCAAAAAGCACCTTAATCATCAAAACACATTACTTTGGTTT
CTAAGATAAAGTGGACCGAATGGCCTATTGTACAAATTTAATTTTGTACT
TACAAAATAATTTACAATAAATTGCATGTATTTTACTCTCTTTAGAACAC
CATCGTCAAAAATTCTACGTGAGGATCAAAGAAGAAATATGTTTGTGTAT
GATTCTACTGAAGTTGAAGTGAAAAGTACTGAAGAAGCTTTTGATTTGTT
CTGGAAAGGTAATTTCATAGGATGCTTTGAATTTCCTAAGCTTTTCTTCA
GATTACATTTTACAAAATAATAGGGTTGCTAAGGACCTGAAAACCATATA
AACCATAATCTTGAAAATCAAATAAAATTTGGCTAAAAACCTTAAAACTG
TCAGAAATACAATAAACACACACTGTAATAAAACACAATTATATCATAAT
TTGAAATACTTTTTTTTTTGTATTAACTAGGGTTTCTTTTAATAGAAACT
GAAACTCACCCCAACCACACATGTTATCAGTTCCTTCATTGAAAATTTTC
CCAATTGTTAAGTTCTGTTTGGAGTGAATTAGCATGACTGATTTTTAGAA
TGAATCGTGAGCCAATAATCACATTTACTATTCAGGCCAAAATAGAAGGA
AGACTGCTCTTACTATGCTCAATGCAGAATCAAGCAGAAGCCATTGTGTT
TTCACAATCAGGCTTGTTCAAGCGCCATTGGGTCCAAATGGAGACTCAAT
AATGAAGGTAACATATGAAAATCTTTGCAATATGATATATCAAAGCTCCC
TTGGAACTGTGAAACATTTTAATATTCTTTTGTAGTGGACTTTCTTTTGA
ATTTCCTAAGGAAACTTTTCTTGGAGATTCGTCAAATCTTGTAATGGTTC
ATAATAGCATGTTGACATTGAAACAAAAAATTATTTTTAATTTCAGGATC
GTAATTTAATTGGTATCAGTCAGTTATCTTTGTGTGATTTGGCTGGATCA
GAAAGAACCAGTCGTACCAAAGCTGATGGTGATAGGATAAGACAAGCAGG
GCACATCAACAATTCTCTCATGACTTTGCGATCTTGCATCGAAACCTTAC
GAGAAAACCAAAAGAGCCAAGAAAGTGGTGGCAATTCAAAGGTAGCAATG
ATAATCTGTCGATGCCATGAAATAAGTGGAACTTCTCCTATGAGATAAAT
TGTATCTAGTGCAGTAAATAGTTTAGTTTAATTTAACCACCCCCTAACCA
AATAACAAGCGTCTTTGTTCATTCCTTGATCTTATAAGGTTTCAATTCTT
CTTTCAGATGGTGCCATATCGTGACTCAAAACTTACACATCTTTACAAAA
ATTACTTTGATGGCGACGGGAAGGTTTGTATTCACTATTGCTTTTTTTAG
TATTGGTGATTAGTATATCTCTTCATGTCTCTTTTCTCAAACGCCTATAA
TAATTCAACCCTTATTACTATTACTATTTAGGTTCGAATGATAGTTTGCT
TGAATCCAAGTGCTGCTGACTTCGACGAAAGTGTGGTAAGTATTTGCTCA
ATATTATTATCAAAAAAAAGAATACCATCTTCAAATTAATCAAGATTACA
ACTTAATGGTAATGACTTACCTTATTACACTAATATATTACTAGTCATTT
TATTAACACGAACTGAAAAATTTTGTGTTAATAAAAAGACTCTTAATTAA
AACCAGCTGTGGTCTCCTTGAAAAAGCAATAAAATTTGTGTTAATTTTTT
GCGTGTTAATTTCAAGGCCGTGTCTACTTACTTTCGTGTAATAAGGTAGA
TGTAATTTTGTATCTTTGTTTTACAGCACGTTGTGAAATTTGCTGAAATG
ACTCAGGAAGTGAAAGTCGCCAGATCAGAGGGTGTCAAGTAAGTAACTTA
TTACTTTGGTTAACACCCTTTTCTAAATGACTCAAATGAATAGATTTAAT
GGGATCTAGAGGCGATATATCATTTGTTATATAAATAATTTACTTGTTCA
TTTCGATTCATTTCAATATTAAGCTATTGCCCTAATTGATAGCTGTTAAA
TGCTGGGCAAATGTAATTAATTTGTTTTTAAATTTTTTAAGGTTTGATCT
TGGACTTACACCTGGTAGAGGAAAAGGTATGAAAATTTCTGATCGTTGTC
ACCTTCATTTTTATGATATTATGTTTTTAGAAACCTCTCTCCCCTGGACT
ACCACACTTATTTTTTACTTTATTTCCAGCCAGCAAGATGTTTAAGAATG
TGGTGGAGGATGTGTCAGATGGATTAAGTAGTGGTAAGTCAAATCATTTC
GTTTCTTAGAATTATGATAAGTGTATAGGCTTTTATCATGTTTAATTGCT
CGTTCAATATCGATCAGATTTTAGTCAAAAATGACCTGTGGACGCAAAAT
TTGATTTGATTTGAACTTGCCCAATCATCCTGAACCGTCGTGATTATGAC
CACCATATATTTTCCTTTAGACCTTGGAAGTCAAGAAGATTTGATGAGAA
CAGTTCAACAATTTGCTTCATGGCCGTTATTAGAGGTTAGTAGTTCATCT
CCTGTTCCTTCACAACTCTTACAGTCATATTTTGAAAAAGTGGACCACTT
TATAAAAGTTATACCTCAAAATTTAGGTTTGGCTGTGTTCTCTAATAAAA
GTTTTTCTGATCTCTTTTTGTTAGCGTTTTTATTAACTTTAGGATGATTA
GAAAAAGGTGTTTGTTGAACAACGTTTCAATTTTTGATCAAATTATTCTA
TTTCCATAGCTCTCCTCATTCAATGACGCGACCACGCTTCCCAATCTACT
GCAATACTTAGAAGAAAGGATAAAACTGCGGCGAACCTTGTTTACCGACT
GGAAACAAAGACGTATGAAGAATATTTTGATTTGCAACAACATTCGATCA
ACTATAATGAGAAATGTCCCTGCATTTTATATAGAAAGATAGCACAAGGT
TCTTTTTGTGTTATTGCAGTCAACGCGATTCATCTAGTTCCATGGTTTTT
GATTTTATTTCAATGATATATCATTCTTCTTTTACAGAGGACGAAGTCAG
ACAAATGATACTGCAACTTGAACAAGATAATATTGATCTAACGAAAGCAC
TGGACGATCAAAGATCTGTTCTTGCTGACAGAGAAAGAGAAACAAAACAG
TTCGAGAAGAAGATTCGAATTTTGAATGAGAAATGCGATACATTACAAAG
ATCATCACAAACTTACGAAACTCAAAAACGACAAGTCGAAGTTGAGGTAT
GCTCATCAAACTTTCAATTAAAATTGAACTTGTATTGTTTTAGTATAGTT
GACTAATTGATTGAATTTAATAATTTGTTAATTCCATTTTTAGCTTGAAA
AACAAAGAGAGCTTGTCCATAAAGAACGAACTGAGAAAATGAGACTGAAG
CAGGTAAATTTTGTTTTTGATCGTTTGAAAATTTTCCATTTTGTGCAACA
AAGTCATCAAGTTGTAGCCTGGCAAGTGCATTAAAACAAAGTTTTTTTCT
TAAGTTATTGCCAAACAATATAAAAATATTATATGTATTTCATTATAGGC
ATTGAGAGATCTAACATCTTCAGAAAGGCTTCGTTACGAAAAAGAAATGG
TATGTTTTCTTCAGTCTTTTTTATAAACTTTTATATCTATGAAAAGTGAA
ACGAAGATATTATCCTAGCCTGTACCACCCCACCCACAGGCGTTTTTATA
TTTTGAAAAAACATTACCGTGTGTCGGTTGGTTGCGGTTAGCGAGATTCT
ACGTGTCTCAGTTTGTCCCAATTTTCTGGGACAAAATCCTAAAAAATACA
AGCGTAGGAGTGCTCTTTTGAAAATTGAAAGATACCATTGCATTGACGCG
TTAAAAGTAACGTCACTTTAGTTGAGCTACAATCATAGACAAAATATTTG
AGACAAAGGTGATTTCCCGGCGAAATTTTAAATACCACAAATGGTTTTTA
AGCACCTTAAACTACAGTTGGAAAGTAGAGTTTTAACTTTGAGTTTTAAC
ATGAGACTTAAGACTTAGGACCTTTGGATTTCAGGATTTAAAAACTCAAA
TTTGCTCGAATAAGGCTTGGAATATAGCCTAGAAGCCACCGAACCCCTAT
AAAATCGAAATATTCAATGAAAGAAAGTGGAAGTGCTAAAATAGCAATTC
TCGCAGATTCTCGTCCGAACTTTAAATTCTGAAAAACGTTAAAAATCTCA
ATATATTTCGACCATGATTATAGATTGAATGCTAAAAATAGCTACGCTCC
ACCACAGAGACATACAGAGTTTTGTGGAAAAAAGTGCGAGACACGGAATG
TTAACCGAACAAACCGAACTTCGAGTTATCTTTTCAGTCAGCAAAGAAGA
GTTTGGTACAGGCTAATATTATCCATGCAATAGGTTTTCTTCTCAAACAT
GGTTGAAATGGTCATCTTACTGCGAAGTTTCCTGTCGACGTATGAAATTT
TAACGTTTTGGCTTCATTTTTATGAAAACTTTTTTACTTCAGGATAAACG
TGTAAAACAAACACAAATGGAAATGGAAGGACACATCTTTGAAAAATCCG
AAAAACTCCGTCAACTTCGAAACGTCGTCCAAGTAAGTTTAAGCATTCTC
TTATTTAGTTGTGGACAACAATTTAATGTTGACGTTTCATCAGCGTCATA
AAGTATTTTATATTCGGCTGAAAGTGCGTAAAAATCTCTACAAATTTCGA
CTACTTTTGAAACACTTTCAGCACTTGGATGTTCCTGCTGAGAACCAAGG
CAAGGTGAAGAAATCGATAAGAGAAGAGGCACCTCTTCGAGCTTACCCAC
AAACGCCTGCTTCCGCCCCGCACCCAGCAGTTCACAAATCGTCACGTCGA
CCACCCATAGCTAACAAACCTCTGCATACACGTACGAAAACCACCACCAA
TGCAACGCCTCACGGAAAGAAGAAAGTTCGATCTCGATCACCTCCACCCT
CTGCAGGAAGGGTAAGTAAGCTTTTATAAGGGAGAAACTTTCCGCTGAAA
ATTTATTTTTTAGATGTTTTATGGTCAGCTACCTTTGGAAGTTATAAATT
ACTTATTTAAAAGGATATAAGCTTTGGCGAGATAGATTGACAACGATGCT
GGTATTCTTTTGAAGCCAGTTTTAATGCCAATTTGTATTCCCAATCGAGA
CATACATGTCTTTTTTCAAGTCTGTATACACAAACAACTTAGAAGATCCC
AGTAGAATAAATGAGCATAGTGTCAAAAACAAACTTAGTCTTAATCCAAT
TTAAACTTAGTATTGTCATAAAGGAGTGAAACTTTCTTTACAGAATAAAG
ATATTGCCCCAGTTCGCGCCAAACATCGACGATCAAGATCTTCTGATTAC
TGGCTTGAACATAAACCCACGGAGACACTTGCTACTAGTAATAACTTTTT
CTTTTATGTTACATTTCAAAAAGTAATACCTTCCAAAGAAGGACTGAGTG
TCACTTTTTTATGATTAGAATATAATATATTTACTATTGTTGGTTTTCCA
TTCAGATACCGTAATGCAGCCAAACTTGAAGAACAAAAAGACGGTGGATA
TGCCAAAAGTTAAAGATTTCAAGGTATTGTGTAAAATAAATTTTTTTATT
GAATTTCTTTCTCGCGAAACTCGAATATTTTAAAACACCCTTTTCTTCTC
ATCGTTCTATCCCACTACTAATTGATGAGCCTATGGGTGAAAATTATTTC
CATTACATGAACACAATGATTCCTGTACATGAAATTATTTGTTTTTTTTC
AGTAGAAGGCAGGTCCTGATAATATTCACGGTTTATTTCTTTTTTTTTAT
AGCACATTTGGAACATGCCAGTAAGATTGCTTTGTCAGTAGCAAGGAGAC
AAATTTGCAGTTTATTCATTTTTTTTCTATTCCTAGTCATTTTCAAGTTA
TATCAGTTGTTTTGAGAGTCAAATTGTTCTGCCAGAAGTCCCTCGTTGTG
TTGAAAGTCTCTTTATTAGTGTTCATAAGAATTGATTATATTATGTCAGT
TGCTGGGCATTGCTTTATATGTTTTTGTATTCGACTGTTTCCCGTTCTTG
ATTTCAGTCAACACCGAACTACATCCTGACGCATCAAGAAGAAGATTCTT
CCGGTGAAATCGAAACTAAATTGATTAAGGTACTTCTTTATTATAGTAAT
TTTTATCCACATCTGATAATCGTCTTGTGTGTGAAACACTGTAATGGTTG
TTTTTAATTTTTGAAGAAAAATATATTAAATCAAGGTACTTCCTTAATTT
TTTTCTTCATAGATGCATTTGTGCTTCAGTGCCTAAAAAATTTCAACATG
GGGTTATCAGCAGCCACTTTTCATCCGTACTTTAGAGATGACCTACCTCA
CTTCTTTCAATTTTCAGGGAGAAGTAATGAAAACTCGAGGAGGTGGTACT
AGTGTTCAATTCACCGACATCGAGACTTTGAAGAAAACATTAGAAGCTAA
AGGTGGAATCCCCTCAACTCCTAAACCCCCGAAAACTAATACTAAAACGT
GAGTATGCTTTTTCTTGGGTTTTCAAGCAGTGACGGCTGATAAAAAATTT
AATTAGAAATGTTAAGCTGTTGCTATTAGCTATTTATAGATAATTTTTAT
TCCATTTCTATTTTCAGTAAAAAACGAAAATCAGAAGGAGAAGACGAAGG
AGCGAGTGATGATAGTTGGACCAGCGTCGAAACTCGCGTATGTAGTCATT
TCTTGATTCATTGTTGGTAACTCAAAATCACCTGAAGAATTAATTGTCTG
CGTATTATTTAGCTTTCCATTGATATAAAAATCGTTTTCGTAGCAACTCT
CTATCAAAAGTAGCAAAATTTTGTCTTGTTTTCACTTTCTTGCACGAATT
TTAAAAACCAAGTAGTGAAAACTATAAGCACATTTAGATACCTTTCCAAC
GATACCAATGAACATGAACTGGTTGGGAAGTTATGGCCAACAAATAAAAA
CACTGCACACCTTTTTGAAATATACTTTAAAATGTTTTCTCAAGTTTAAT
TCTATATAAACGATCTTTTGAAGATGCTTATCATTTTCTTTTCAGTGTGC
GGTTGGTATTGAAGGGCGACCAGGGACGTCACCAGGATTAACGCACCATG
CCAAGTGAGTTTAAAATTTTGTTCCCAAGTTTGTTCCTTGGGCCTATTCT
TAACTGTCACATTAGTTTTCAGGTTTTCACGCCGTTTTAATAGTAATGTT
TTTTTTGGACCTACCCCTGTGGGCTGTAGGTCCTATAAATTAACCTCTGT
TCGTTCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTTACTAG
CTTTTCTCGGGATTGGCTCATTAGTTTTTCCTAATTTTTGGCACAAAGAT
GCAAAATGGTAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAT
TCATTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTG
GCATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAG
ATGCGTATTAGCAATGCCTAAAACATGGATTAGTCCGATTTTTGAGAAAA
ATTCTATTCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTT
GCAGATTTTCATCGGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAA
AAACATTATTGATAGCAATGCCCACCATCAAGCATGGATTAATTGTCAAT
AAAAGTGATTTTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTA
TTTTCGCCGGAAAAACGGTATTTCTTGAATTTCTCGAGCTGTGCTTTATA
TTTTTTCATGAAATTTTGCAGACTGATGCAAAATGACAATACCTAAAATG
TGACGGAGCCCGATTTTCGAAAAAAATTCATTTCCGGCCGAAAATGCCGG
AAATATGCCGGAAAAACCGGTTTTTTGGCATTTTCTCGAGATTTCATCAT
TAGTTTTTTCTGATTTTTTGCACAAAGATGCGTATTAGCAATGCCTAAAA
CATGGATTAGTCCGATTTTTGAGAAAAATTCTATTCCGGCTGAAAATGCC
GGAAATATCCCGGAAATCGCCGTTTTTGCAGATTTTCATCGGACTTTTTC
CTTATATTTCGTTGTTTTTTCACACAAAAACATTATTGATAGCAATGCCC
ACCATCAAGCATGGATTAATTGTCAATAAAAGTGATTTTTGAAGCCGGAA
CTTTCTAAAAATCGCCGGAACAGCCTATTTTCGCCGGAAAAACGGTATTT
CTTGAATTTCTCGAGCTGTGCTTTATATTTTTTCATGAAATTTTGCAGAC
TGATGCAAAATGACAATACCTAAAATGTGACGGAGCCCGATTTTCGAAAA
AAATTCATTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTT
TTTGGCATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCAC
AAAGATGCGTATTAGCAATGCCTAAAACATGGATTAGTCCGATTTTTGAG
AAAAATTCTATTCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGT
TTTTGCAGATTTTCATCGGACTTTTTCCTTATATTTCGTTGTTTTTTCAC
ACAAAAACATTATTGATAGCAATGCCCACCATCAAGCATGGATTAATTGT
CAATAAAAGTGATTTTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAG
CCTATTTTCGCCGGAAAAACGGTATTTCTTGAATTTCTCGAGCTGTGCTT
TATATTTTTTCATGAAATTTTGCAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTC
ATCTTTAGCTTTTTCTGATTTTTTGCAGAAAGATGCGTATTTGCAATGCT
CAAAACATGGCCGAGTTCGATTTTTGAGAAAAAGTTTTTTCCGGTTGAAA
ATGCCGGAAATCGCCGTCTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATTT
TCGCTAAACGATATATTTTCTGACTGATTTTTTTCTCCTCGCATTGCTAT
CTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTAGTAT
GCGCTAACCCCGGCGCTAACGTCGCTGATAAATGCTCTAAGTTTATTAAA
TTTTTCGAACCTTGGAATTGTTTTTTTTTTTCAAACACATCTTCTCGTCA
TTAGCTCTCTAACGCAGGTGATGATCTGTAGTAATCTGTATCTCTGTGTT
CGGTAGCTGTCTTACGCCATTATTCCCTTTTAAGTAAGTTTACGACGACT
TGTTTTTTTCTTTTTTCAGAAAATCGAAGCATTGAGTAATCGCAGCATTG
AAAATTTCGTTGGTGTGGATGAATAGGTAAATCAAATCGATTAAAGATGG
TAGAAGTAGAAGAAATAACGAAAGAAAATGATTGACGAATTCGTCCTATC
TGCTGATAGCTAATTATTCTAACCAAGACGATAAAAATATAGAAATATTT
TGAATATTGATTTAATTATCCTAATTTGCCCCTTGTATATTTGTAATCTA
TTTCTATTTCTTTATTTTTAAAATACAATGTATATTTAACCACCTTTAAC
CTTCAGATCATATCGAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_012115	XLOC_012115	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000390	supercontig	sc0000390:243906..254572 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.00332922	0	2.93916	10.9542	0.703705	2.07653	0	0.000986504	0	0	0	0	0.000655909	0.00063037	0	0	0	0	0.000516588	0.00083384	0	0	16.8411	10.2567	0.000801811	0	0.000829349	0.00213803

Blast

[Close]

BLAST of TCONS_00021609 vs. Swiss-Prot (Human)
Match: KIF23 (Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3)

HSP 1 Score: 476.863 bits (1226), Expect = 7.813e-153
Identity = 297/777 (38.22%), Postives = 452/777 (58.17%), Query Frame = 1

Query:   88 EIDEDNNYGVFISFVEVYNNSIFDLLDDSCIDPIKNRTPSSKILREDQRRNMFVYDSTEVEVKSTEEAFDLFWKGQNRRKTALTMLNAESSRSHCVFTIRLVQAPLGPNGDSIMKDRNLIGISQLSLCDLAGSERTSRTKADGDRIRQAGHINNSLMTLRSCIETLRENQKSQESGGNSKMVPYRDSKLTHLYKNYFDGDGKVRMIVCLNPSAADFDESVHVVKFAEMTQEVKVARSEGVKFDLGLTPGRGKASKMFKNXXXXXXXXXXXXXXXXXXXMRTVQQFASWPLLELSSFNDATTLPNLLQYLEERIKLRRTLFTDWKQRQDEVRQMILQLEQDNIDLTK------ALDDQRSVLADRERETKQFEKKIRILNEKCDTLQRSSQTYETQKRQVEVELEKQRELVHKERTEKMRLKQALRDLTSSERLRYEKEMDKRVKQTQMEMEGHIFEKSEKLRQLRNVVQHLDVPAENQGKVKKSIREEAPLRAYPQTPASAPHPAVHKSSRRPPIANKP-LHTRTKTTTNAT-----PHGKKKVRSRSPP---PSAGRNKDIAPVRAKH---RRSRSSDYWLEHK---PT--------ETLATNTVMQPN-------LKNKKTVDMP-KVKDFKHIWNM-------PSTPNYI-----------------LTHQEEDSSGEIETKLIKGEVMKTRGGGTSVQFTDIETLKKTLEAKGGIXXXXXXXXXXXXXXXXXSEGEDEGASDDSWTSVETRCAVGIEGRPGT--SPGLTHHAK 2229
            E+DED+ YGVF+S++E+YNN I+DLL++   DPIK + P SK+LRED+  NM+V   TEVEVKSTEEAF++FW+GQ +R+ A T LN ESSRSH VF I+LVQAPL  +GD++++++  I ISQLSL DLAGSERT+RT+A+G+R+R+AG+IN SLMTLR+C++ LRENQ      G +KMVPYRDSKLTHL+KNYFDG+GKVRMIVC+NP A D++E++ V++FAE+TQEV+VAR    K   GLTPGR      ++N                      +Q F   P  E+   ND  TLP L++ LE+R  LR+ +  ++ ++ +  + ++ +   DN  L+K       L+++  +++ ++ E ++ EKK + L  K + L++++  YE  KR ++ ELE Q + + ++ ++K RL+  L+ + +   +++EKE ++RV   Q+EM+  ++ K EKL+QL+ +V         +   ++  RE+   R+   +P       + + S    + ++P LH R+ + ++ +        ++K+ + + P    S  R +   P ++K       R   YW E +   PT        E      + QP+       L+++++     +  D K   NM       P  P+ I                 LTHQE  S GEIETKLIKG++ KTRGGG SVQFTDIETLK+  E+  G         +  +     +  + +GA +  WT VETRC+V +E R G+   PG  HHA+
Sbjct:  209 EVDEDSVYGVFVSYIEIYNNYIYDLLEEVPFDPIKPKPPQSKLLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFNIKLVQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRTCMDVLRENQMY----GTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRFAEVTQEVEVARPVD-KAICGLTPGR-----RYRNQPRGPVGNEPLVTDV------VLQSFPPLPSCEILDINDEQTLPRLIEALEKRHNLRQMMIDEFNKQSNAFKALLQEF--DNAVLSKENHMQGKLNEKEKMISGQKLEIERLEKKNKTLEYKIEILEKTTTIYEEDKRNLQQELETQNQKLQRQFSDKRRLEARLQGMVTETTMKWEKECERRVAAKQLEMQNKLWVKDEKLKQLKAIVTEPKTEKPERPSRERD-REKVTQRSVSPSPVPLSSNYIAQISNGQQLMSQPQLHRRSNSCSSISVASCISEWEQKIPTYNTPLKVTSIARRRQQEPGQSKTCIVSDRRRGMYWTEGREVVPTFRNEIEIEEDHCGRLLFQPDQNAPPIRLRHRRSRSAGDRWVDHKPASNMQTETVMQPHVPHAITVSVANEKALAKCEKYMLTHQELASDGEIETKLIKGDIYKTRGGGQSVQFTDIETLKQ--ESPNG---------SRKRRSSTVAPAQPDGA-ESEWTDVETRCSVAVEMRAGSQLGPGYQHHAQ 954

The following BLAST results are available for this feature:

BLAST of TCONS_00021609 vs. Swiss-Prot (Human)

BLAST of TCONS_00021609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF23	7.813e-153	38.22	Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF2...	[more]

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TCONS_00021609 (transcript) - C. hemisphaerica