TCONS_00021610 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00021610
Unique Name	TCONS_00021610
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3062

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000390:243906..258459-

transcript sequence

>TCONS_00021610 ID=TCONS_00021610|Name=TCONS_00021610|organism=Clytia hemisphaerica|type=transcript|length=3062bp
agaaaattaAAATAGTCACAATGTCAAGAAATGGTATTTTGAAAActcca
aaaagaaaaactacACCTCAAACTAAGCATCAAGATCCAATAGAGGTCTT
TTGTCGTGTAAGACCTCCTAATGATGAATGTGAAGAGACTTGTGTTGAAA
TTTTCAATGATGGAAATCTCCAGTTGAATGCACCAAAGacATTGAAAACA
CAATCAAAGATTGAACAGATACAATGCACTTTCAACAAGGTCTTTACAGA
ATCTGTTTCCCAAAGTGAATTATTTGATAATGTTGGCTTGCCTCTAGTTG
AAGATTTGTTGAATGGCAAAAATGgattgtgcTTTATGTATGGAATAACA
GGATCAGGAAAGACACACACAATGAATGGAACTCCAACAGATGGCGGTGT
TCTACCTAGATGTTTGGATGTTGTCTTTAATAGTATTGGCCAGCTTCAAA
CAAGCAGATGTatttttaaaCCAGACGGCTACAATGGATTTGATATCTTG
GCTGATGTTGATGCTAAAGATGAGGCACAAAGGCAGCAACGTGAGCTTGA
AGTGCAACAGAGAAATATGAGAAACAGAATGGACAACAATGACATGATGA
GAATCCCAGACTCCACTTGTCTTGAGATTGATGAAGATAACAATTATGGT
GTTTTCATCTCCTTTGTCGAAGTGTACAATAACTCCATTTTTGATTTGCT
TGATGACAGTTGCATCGATCCAATAAAGAATAGAACACCATCGTCAAAAA
TTCTACGTGAGGATCAAAGAAGAAATATGTTTGTGTATGATTCTACTGAA
GTTGAAGTGAAAAGTACTGAAGAAGCTTTTGATTTGTTCTGGAAAGGCCA
AAATAGAAGGAAGACTGCTCTTACTATGCTCAATGCAGAATCAAGCAGAA
GCCATTGTGTTTTCACAATCAGGCTTGTTCAAGCGCCATTGGGTCCAAAT
GGAGACTCAATAATGAAGgaTCGTAATTTAATTGGTATCAGTCAGTTATC
TTTGTGTGATTTGGCTGGATCAGAAAGAACCAGTCGTACCAAAGCTGATG
GTGATAGGATAAGACAAGCAGGGCACATCAACAATTCTCTCATGACTTTG
CGATCTTGCATCGAAACCTTACGAGAAAACCAAAAGAGCCAAGAAAGTGG
TGGCAATTCAAAGATGGTGCCATATCGTGACTCAAAACTTACACATCTTT
ACAAAAATTACTTTGATGGCGACGGGAAGGTTCGAATGATAGTTTGCTTG
AATCCAAGTGCTGCTGACTTCGACGAAAGTGTGCACGTTGTGAAATTTGC
TGAAATGACTCAGGAAGTGAAAGTCGCCAGATCAGAGGGTGTCAAgtTTG
ATCTTGGACTTACACCTGGTAGAGGAAAAGCCAGCAAGATGTTTAAGAAT
GTGGTGGAGGATGTGTCAGATGGATTAAGTAGTGACCTTGGAAGTCAAGA
AGATTTGATGAGAACAGTTCAACAATTTGCTTCATGGCCGTTATTAGAGC
TCTCCTCATTCAATGACGCGACCACGCTTCCCAATCTACTGCAATACTTA
GAAGAAAGGATAAAACTGCGGCGAACCTTGTTTACCGACTGGAAACAAAG
ACAGGACGAAGTCAGACAAATGATACTGCAACTTGAACAAGATAATATTG
ATCTAACGAAAGCACTGGACGATCAAAGATCTGTTCTTGCTGACAGAGAA
AGAGAAACAAAACAGTTCGAGAAGAAGATTCGAATTTTGAATGAGAAATG
CGATACATTACAAAGATCATCACAAACTTACGAAACTCAAAAACGACAAG
TCGAAGTTGAGcttgaaaaaCAAAGAGAGCTTGTCCATAAAGAACGAACT
GAGAAAATGAGACTGAAgcagGCATTGAGAGATCTAACATCTTCAGAAAG
GCTTCGTTACGAAAAAGAAATGGATAAACGTGTAAAACAAACACAAATGG
AAATGGAAGGACACATCTTTGAAAAATCCGAAAAACTCCGTCAACTTCGA
AACGTCGTCCAACACTTGGATGTTCCTGCTGAGAACCAAGGCAAGGTGAA
GAAATCGATAAGAGAAGAGGCACCTCTTCGAGCTTACCCACAAACGCCTG
CTTCCGCCCCGCACCCAGCAGTTCACAAATCGTCACGTCGACCACCCATA
GCTAACAAACCTCTGCATACACGTACGAAAACCACCACCAATGCAACGCC
TCACGGAAAGAAGAAAGTTCGATCTCGATCACCTCCACCCTCTGCAGGAA
GGAATAAAGATATTGCCCCAGTTCGCGCCAAACATCGACGATCAAGATCT
TCTGATTACTGGCTTGAACATAAACCCACGGAGACACTTGCTACTAATAC
CGTAATGCAGCCAAACTTGAAGAACAAAAAGACGGTGGATATGCCAAAAG
TTAAAGATTTCAAGcaCATTTGGAACATGCCATCAACACCGAACTACATC
CTGACGCATCAAGAAGAAGATTCTTCCGGTGAAATCGAAACTAAATTGAT
TAAGgGAGAAGTAATGAAAACTCGAGGAGGTGGTACTAGTGTTCAATTCA
CCGACATCGAGACTTTGAAGAAAACATTAGAAGCTAAAGGTGGAATCCCC
TCAACTCCTAAACCCCCGAAAACTAATACTAAAACtaaaaaacgaaaatc
agAAGGAGAAGACGAAGGAGCGAGTGATGATAGTTGGACCAGCGTCGAAA
CTCGCTGTGCGGTTGGTATTGAAGGGCGACCAGGGACGTCACCAGGATTA
ACGCACCATGCCAAaaaatcgaaGCATTGAGTAATCGCAGCATTGAAAAT
TTCGTTGGTGTGGATGAATAGGTAAATCAAATCGATTAAAGATGGTAGAA
GTAGAAGAAATAAcgaaagaaaatgattgacgAATTCGTCCTATCTGCTG
ATAGCTAATTATTCTAACCAAGACgataaaaatatagaaatattttgaat
attgattTAATTATCCTAATTTGCCCCTTGTATATTTGtaatctatttct
atttctttatttttaaaatacaatGTATATTTAACCACCTTTAACCTTCA
GATCATATCGAC

Run BLAST on NCBI

transcript from alignment at sc0000390:243906..258459-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00021610 ID=TCONS_00021610|Name=TCONS_00021610|organism=Clytia hemisphaerica|type=transcript|length=14554bp|location=Sequence derived from alignment at sc0000390:243906..258459- (Clytia hemisphaerica)
AGAAAATTAAAATAGTCACAATGTCAAGAAATGGTATTTTGAAAACTCCA
AAAAGAAAAACTACACCTCAAACTAAGCATCAAGATCCAATAGAGGTAGG
TCTCTTTCTACTTAATAATGACTTGTGCTATTTTTACTACAGTTTCTGCT
AGGGACCATTCAAAAAGTATGTATGGTCTGAGGGGGGATGGGGGTCCTTT
TAAGAGCATACCCCAAAGCTAGCTAAAGTGCACCTGGGGTTTCAAGCAAT
GTTTATAGGCTGTTGCTTTACAGTTTTTGATTTGTTTTTTCCCAGCTTTT
CTCTCAAGGCTCGAAATAAAGATTTCAAGTGGGTCGGACAAAATGTCCGA
TCAGGGTTGCTTTAGCTTGAAAATTATGATTTTTGGGTCAGACATGAAGC
TATTTGGGTCGGACAATGTCCAATGTCCGACTGTTATTTCGAGCCCTGTT
TTCTAATCGTTCTAATTCAAAAAATAAGAATTTAAGTCACTTTTCCATTT
GACATCCTAGAAGAAGTTTCAGCACAAATGTAAAATGTAATTATTATTGT
TATAATGTCTATTATTGTTATTATTATTTTGATAGGTCTTTTGTCGTGTA
AGACCTCCTAATGATGAATGTGAAGAGACTTGTGTTGAAATTTTCAATGA
TGGAAATCTCCAGTTGAATGCACCAAAGGTATTGCCCGTTTAAATTCTCT
TATTCTTTCTAACAAACCTTTTTCACTGTTTCCCACTTGAAACAATAACA
TTGCATATCGTCAACCCCCTTGACTTTGGGGGGGGGGGTTACACCCAAAA
TAATGCAAATGAAAACCGGGAGCTAAAATACCTGAAAATACAGCCAAATA
TTAGGGGACTGGAATTTCAGTGGCAAAGCTGCGGGCTGACTATTTCTTCT
ATTATTTTTCTTTATATTAGCCTAAAATTTCGTCCTCGCTTCGCTTGTGT
TATTTTTGAAGAGATTTTTACTTATTATAGCGGGCTGCTGAAAAACTTTT
AATATTTGGTGAGACCTATTTTTTTGCCTTGGACCTAGACCTGGGCTGAC
CCTATGATTGGTTGTTACAAAGTATTCAACTTTTCACCTTAAAAGAAAAT
CTTTTTATAAATTAAGCCTCAATGTCAAAATAATGAATTTGAAATATGGC
AAGTAATGATATTGACCATTGTATTTTCTATTTTCAGACATTGAAAACAC
AATCAAAGATTGAACAGGTAAGATTTCTTGTCCCTTGGCATACCAGCTAG
AAAAGAAAAATCCTATTTTCTGCATTACTAGCTGGGTGAATTAATGTTAT
TGAATGCCTAGCTACAAAAAGTTTGGAAAAAGTTGAAAGTGAAAAGGTAG
GAAGATAAAGAGGGCCAGCTTTTTTATTTGATGCAAGATGTTGCAGAGAG
TTTGCATTTCTATTGGTTTTTTGATTTTTTAATTACTTGCTCAGGTAATT
ATATACATTACAATAATTTATTGCTCTTTATTCAGATACAATGCACTTTC
AACAAGGTCTTTACAGAATCTGTTTCCCAAAGTGAATTATTTGATAATGT
TGGCTTGCCTCTAGTTGAAGATTTGTTGAATGGCAAAAATGGTAAGTCAA
CAATCTCAATCCCCTGATTGGAATCCATCTCTTTTTTACTTCATAAAGAC
AAATCAATCAGAATTCATCTGTCTTATAGTAATCATGTGTACATAAGAAT
ATTTATTTATTTTTTGGTAAACTTTTTTGAAATAAAAATGAAATGACTTT
CTCCCCAATACCCTACTCATTAACTTTGGGAGAATATTTTCCTTTGGATC
AAAAGGAAAGCTGATATTTTGTTTTAAGTCTCCTTTTCAAATTTACACTA
CATAATATTTTTCAGGATTGTGCTTTATGTATGGAATAACAGGATCAGGA
AAGACACACACAATGAATGGAACTCCAACAGATGGCGGTGTTCTACCTAG
ATGTTTGGATGTTGTCTTTAATAGTATTGGCCAGCTTCAAACAAGCAGAT
GTGTAAGTTTCGCCAACAAGTTTTCATAAACTTCTAGTGAAATGCTGATG
CAACTCTCTTATAGATTTTGTAAGGTAGATATACGGTTGCAAAGCTGTGG
AAATTAATCTGAGTTTTTCAAAGGGGATATATATGTATATGGAAGATATT
TCACTTTCTACAAGATATTTTTCAAAGGGTTTCCTTGGATGAGTTCTACA
TTACAGTGCTTTCTTTGCAATAGCTCTTGCTTGTTAATCCTTTTGATAGA
TTTTTAAACCAGACGGCTACAATGGATTTGATATCTTGGCTGATGTTGAT
GCTAAAGATGAGGCACAAAGGCAGCAACGTGAGCTTGAAGTGCAACAGAG
AAATATGTAAGATATTATGAAAATAAACTGGAAGCAATTATTATTATGCA
AGTAATTTTGATGATTCTTTTAGAAAAACGGTTTGTTAAAATGTTTCAAT
TATTGAAATTGTTCTCTCTAATAATTCCTGCATGTTCCAATTCACAGAGA
ATAGGTTGGATTTTAAGTCAACACCATTTTGAATTCTCTGTAAATTAGCT
TGCTTTTTTGTTTTGAAAAAGCTGATTAGCTTTTGATTCAGATTTATGTA
CCAAGATCTATGAACATTTTTCCTTTACAGGAAATGTTGACTGACAATTT
CTTCTTATTTTCTAGGAGAAACAGAATGGACAACAATGACATGATGAGAA
TCCCAGACTCCACTTGTCTTGAGATTGATGAAGATAACAATTATGGTGTT
TTCATCTCCTTTGTCGAAGTGTACAATAACTCCATTTTTGATTTGCTTGA
TGACAGTTGCATCGATCCAATAAAGAATAGGTATTTATCAAGCACAGGAT
TTTCTTGTTGGATATCAATTAATAACCAGGAGAAACTTAGATATAATCCT
TCAACTTTCGTGAAATTTGTACAGCATTTTCCTTAGGGTCAAAAGAAAAG
CTGGTATTCAAAAAGCACCTTAATCATCAAAACACATTACTTTGGTTTCT
AAGATAAAGTGGACCGAATGGCCTATTGTACAAATTTAATTTTGTACTTA
CAAAATAATTTACAATAAATTGCATGTATTTTACTCTCTTTAGAACACCA
TCGTCAAAAATTCTACGTGAGGATCAAAGAAGAAATATGTTTGTGTATGA
TTCTACTGAAGTTGAAGTGAAAAGTACTGAAGAAGCTTTTGATTTGTTCT
GGAAAGGTAATTTCATAGGATGCTTTGAATTTCCTAAGCTTTTCTTCAGA
TTACATTTTACAAAATAATAGGGTTGCTAAGGACCTGAAAACCATATAAA
CCATAATCTTGAAAATCAAATAAAATTTGGCTAAAAACCTTAAAACTGTC
AGAAATACAATAAACACACACTGTAATAAAACACAATTATATCATAATTT
GAAATACTTTTTTTTTTGTATTAACTAGGGTTTCTTTTAATAGAAACTGA
AACTCACCCCAACCACACATGTTATCAGTTCCTTCATTGAAAATTTTCCC
AATTGTTAAGTTCTGTTTGGAGTGAATTAGCATGACTGATTTTTAGAATG
AATCGTGAGCCAATAATCACATTTTCTATTCAGGCCAAAATAGAAGGAAG
ACTGCTCTTACTATGCTCAATGCAGAATCAAGCAGAAGCCATTGTGTTTT
CACAATCAGGCTTGTTCAAGCGCCATTGGGTCCAAATGGAGACTCAATAA
TGAAGGTAACATATGAAAATCTTTGCAATATGATATATCAAAGCTCCCTT
GGAACTGTGAAACATTTTAATATTCTTTTGTAGTGGACTTTCTTTTGAAT
TTCCTAAGGAAACTTTTCTTGGAGATTCGTCAAATCTTGTAATGGTTCAT
AATAGCATGTTGACATTGAAACAAAAAATTATTTTTNCAACGTGAGCTTG
AAGTGCAACAGAGAAATATGTAAGATATTATGAAAATAAACTGGAAGCAA
TTATTATTATGCAAGTAATTTTGATGATTTTTTTACAAAAACGGTTTGTT
AAAATGTTTCAATTATTGAAATTGTTCTCTCTAATAATTCCTGCATGTTC
CAATTCACAGAGAATAGTTTGGATTTTAAGTCAACACCATTTTGAATTCT
ATGTAAATTTCCTTTACAGGAAATGTTGACTGACAATTTGTTCTTATTTT
CTAGGAGAAACAGAATGGACAACAATGACATGATGAGAATCCCAGACTCC
ACTTGTCTTGAGATTGATGAAGATAACAATTATGGTGTTTTCATCTCCTT
TGTCGAAGTGTACAATAACTCCATTTTTGATTTGCTTGATGACAGTTGCA
TCGATCCAATAAAGAATAGGTATTTATCAAGCACAGGATTTTCTTGTTGG
ATATCAATTAATAACCAGGAGAAACTTAGATATAATCCTTCAACTTTCGT
GAAATTTGTACAGCATTTTCCTTAGGGTCAAAAGAAAAGCTGGTATTCAA
AAAGCACCTTAATCATCAAAACACATTACTTTGGTTTCTAAGATAAAGTG
GACCGAATGGCCTATTGTACAAATTTAATTTTGTACTTACAAAATAATTT
ACAATAAATTGCATGTATTTTACTCTCTTTAGAACACCATCGTCAAAAAT
TCTACGTGAGGATCAAAGAAGAAATATGTTTGTGTATGATTCTACTGAAG
TTGAAGTGAAAAGTACTGAAGAAGCTTTTGATTTGTTCTGGAAAGGTAAT
TTCATAGGATGCTTTGAATTTCCTAAGCTTTTCTTCAGATTACATTTTAC
AAAATAATAGGGTTGCTAAGGACCTGAAAACCATATAAACCATAATCTTG
AAAATCAAATAAAATTTGGCTAAAAACCTTAAAACTGTCAGAAATACAAT
AAACACACACTGTAATAAAACACAATTATATCATAATTTGAAATACTTTT
TTTTTTGTATTAACTAGGGTTTCTTTTAATAGAAACTGAAACTCACCCCA
ACCACACATGTTATCAGTTCCTTCATTGAAAATTTTCCCAATTGTTAAGT
TCTGTTTGGAGTGAATTAGCATGACTGATTTTTAGAATGAATCGTGAGCC
AATAATCACATTTACTATTCAGGCCAAAATAGAAGGAAGACTGCTCTTAC
TATGCTCAATGCAGAATCAAGCAGAAGCCATTGTGTTTTCACAATCAGGC
TTGTTCAAGCGCCATTGGGTCCAAATGGAGACTCAATAATGAAGGTAACA
TATGAAAATCTTTGCAATATGATATATCAAAGCTCCCTTGGAACTGTGAA
ACATTTTAATATTCTTTTGTAGTGGACTTTCTTTTGAATTTCCTAAGGAA
ACTTTTCTTGGAGATTCGTCAAATCTTGTAATGGTTCATAATAGCATGTT
GACATTGAAACAAAAAATTATTTTTAATTTCAGGATCGTAATTTAATTGG
TATCAGTCAGTTATCTTTGTGTGATTTGGCTGGATCAGAAAGAACCAGTC
GTACCAAAGCTGATGGTGATAGGATAAGACAAGCAGGGCACATCAACAAT
TCTCTCATGACTTTGCGATCTTGCATCGAAACCTTACGAGAAAACCAAAA
GAGCCAAGAAAGTGGTGGCAATTCAAAGGTAGCAATGATAATCTGTCGAT
GCCATGAAATAAGTGGAACTTCTCCTATGAGATAAATTGTATCTAGTGCA
GTAAATAGTTTAGTTTAATTTAACCACCCCCTAACCAAATAACAAGCGTC
TTTGTTCATTCCTTGATCTTATAAGGTTTCAATTCTTCTTTCAGATGGTG
CCATATCGTGACTCAAAACTTACACATCTTTACAAAAATTACTTTGATGG
CGACGGGAAGGTTTGTATTCACTATTGCTTTTTTTAGTATTGGTGATTAG
TATATCTCTTCATGTCTCTTTTCTCAAACGCCTATAATAATTCAACCCTT
ATTACTATTACTATTTAGGTTCGAATGATAGTTTGCTTGAATCCAAGTGC
TGCTGACTTCGACGAAAGTGTGGTAAGTATTTGCTCAATATTATTATCAA
AAAAAAGAATACCATCTTCAAATTAATCAAGATTACAACTTAATGGTAAT
GACTTACCTTATTACACTAATATATTACTAGTCATTTTATTAACACGAAC
TGAAAAATTTTGTGTTAATAAAAAGACTCTTAATTAAAACCAGCTGTGGT
CTCCTTGAAAAAGCAATAAAATTTGTGTTAATTTTTTGCGTGTTAATTTC
AAGGCCGTGTCTACTTACTTTCGTGTAATAAGGTAGATGTAATTTTGTAT
CTTTGTTTTACAGCACGTTGTGAAATTTGCTGAAATGACTCAGGAAGTGA
AAGTCGCCAGATCAGAGGGTGTCAAGTAAGTAACTTATTACTTTGGTTAA
CACCCTTTTCTAAATGACTCAAATGAATAGATTTAATGGGATCTAGAGGC
GATATATCATTTGTTATATAAATAATTTACTTGTTCATTTCGATTCATTT
CAATATTAAGCTATTGCCCTAATTGATAGCTGTTAAATGCTGGGCAAATG
TAATTAATTTGTTTTTAAATTTTTTAAGGTTTGATCTTGGACTTACACCT
GGTAGAGGAAAAGGTATGAAAATTTCTGATCGTTGTCACCTTCATTTTTA
TGATATTATGTTTTTAGAAACCTCTCTCCCCTGGACTACCACACTTATTT
TTTACTTTATTTCCAGCCAGCAAGATGTTTAAGAATGTGGTGGAGGATGT
GTCAGATGGATTAAGTAGTGGTAAGTCAAATCATTTCGTTTCTTAGAATT
ATGATAAGTGTATAGGCTTTTATCATGTTTAATTGCTCGTTCAATATCGA
TCAGATTTTAGTCAAAAATGACCTGTGGACGCAAAATTTGATTTGATTTG
AACTTGCCCAATCATCCTGAACCGTCGTGATTATGACCACCATATATTTT
CCTTTAGACCTTGGAAGTCAAGAAGATTTGATGAGAACAGTTCAACAATT
TGCTTCATGGCCGTTATTAGAGGTTAGTAGTTCATCTCCTGTTCCTTCAC
AACTCTTACAGTCATATTTTGAAAAAGTGGACCACTTTATAAAAGTTATA
CCTCAAAATTTAGGTTTGGCTGTGTTCTCTAATAAAAGTTTTTCTGATCT
CTTTTTGTTAGCGTTTTTATTAACTTTAGGATGATTAGAAAAAGGTGTTT
GTTGAACAACGTTTCAATTTTTGATCAAATTATTCTATTTCCATAGCTCT
CCTCATTCAATGACGCGACCACGCTTCCCAATCTACTGCAATACTTAGAA
GAAAGGATAAAACTGCGGCGAACCTTGTTTACCGACTGGAAACAAAGACG
TATGAAGAATATTTTGATTTGCAACAACATTCGATCAACTATAATGAGAA
ATGTCCCTGCATTTTATATAGAAAGATAGCACAAGGTTCTTTTTGTGTTA
TTGCAGTCAACGCGATTCATCTAGTTCCATGGTTTTTGATTTTATTTCAA
TGATATATCATTCTTCTTTTACAGAGGACGAAGTCAGACAAATGATACTG
CAACTTGAACAAGATAATATTGATCTAACGAAAGCACTGGACGATCAAAG
ATCTGTTCTTGCTGACAGAGAAAGAGAAACAAAACAGTTCGAGAAGAAGA
TTCGAATTTTGAATGAGAAATGCGATACATTACAAAGATCATCACAAACT
TACGAAACTCAAAAACGACAAGTCGAAGTTGAGGTATGCTCATCAAACTT
TCAATTAAAATTGAACTTGTATTGTTTTAGTATAGTTGACTAATTGATTG
AATTTAATAATTTGTTAATTCCATTTTTAGCTTGAAAAACAAAGAGAGCT
TGTCCATAAAGAACGAACTGAGAAAATGAGACTGAAGCAGGTAAATTTTG
TTTTTGATCGTTTGAAAATTTTCCATTTTGTGCAACAAAGTCATCAAGTT
GTAGCCTGGCAAGTGCATTAAAACAAAGTTTTTTTCTTAAGTTATTGCCA
AACAATATAAAAATATTATATGTATTTCATTATAGGCATTGAGAGATCTA
ACATCTTCAGAAAGGCTTCGTTACGAAAAAGAAATGGTATGTTTTCTTCA
GTCTTTTTTATAAACTTTTATATCTATGAAAAGTGAAACGAAGATATTAT
CCTAGCCTGTACCACCCCACCCACAGGCGTTTTTATATTTTGAAAAAACA
TTACCGTGTGTCGGTTGGTTGCGGTTAGCGAGATTCTACGTGTCTCAGTT
TGTCCCAATTTTCTGGGACAAAATCCTAAAAAATACAAGCGTAGGAGTGC
TCTTTTGAAAATTGAAAGATACCATTGCATTGACGCGTTAAAAGTAACGT
CACTTTAGTTGAGCTACAATCATAGACAAAATATTTGAGACAAAGGTGAT
TTCCCGGCGAAATTTTAAATACCACAAATGGTTTTTAAGCACCTTAAACT
ACAGTTGGAAAGTAGAGTTTTAACTTTGAGTTTTAACATGAGACTTAAGA
CTTAGGACCTTTGGATTTCAGGATTTAAAAACTCAAATTTGCTCGAATAA
GGCTTGGAATATAGCCTAGAAGCCACCGAACCCCTATAAAATCGAAATAT
TCAATGAAAGAAAGTGGAAGTGCTAAAATAGCAATTCTCGCAGATTCTCG
TCCGAACTTTAAATTCTGAAAAACGTTAAAAATCTCAATATATTTCGACC
ATGATTATAGATTGAATGCTAAAAATAGCTACGCTCCACCACAGAGACAT
ACAGAGTTTTGTGGAAAAAAGTGCGAGACACGGAATGTTAACCGAACAAA
CCGAACTTCGAGTTATCTTTTCAGTCAGCAAAGAAGAGTTTGGTACAGGC
TAATATTATCCATGCAATAGGTTTTCTTCTCAAACATGGTTGAAATGGTC
ATCTTACTGCGAAGTTTCCTGTCGACGTATGAAATTTTAACGTTTTGGCT
TCATTTTTATGAAAACTTTTTTACTTCAGGATAAACGTGTAAAACAAACA
CAAATGGAAATGGAAGGACACATCTTTGAAAAATCCGAAAAACTCCGTCA
ACTTCGAAACGTCGTCCAAGTAAGTTTAAGCATTCTCTTATTTAGTTGTG
GACAACAATTTAATGTTGACGTTTCATCAGCGTCATAAAGTATTTTATAT
TCGGCTGAAAGTGCGTAAAAATCTCTACAAATTTCGACTACTTTTGAAAC
ACTTTCAGCACTTGGATGTTCCTGCTGAGAACCAAGGCAAGGTGAAGAAA
TCGATAAGAGAAGAGGCACCTCTTCGAGCTTACCCACAAACGCCTGCTTC
CGCCCCGCACCCAGCAGTTCACAAATCGTCACGTCGACCACCCATAGCTA
ACAAACCTCTGCATACACGTACGAAAACCACCACCAATGCAACGCCTCAC
GGAAAGAAGAAAGTTCGATCTCGATCACCTCCACCCTCTGCAGGAAGGGT
AAGTAAGCTTTTATAAGGGAGAAACTTTCCGCTGAAAATTTATTTTTTAG
ATGTTTTATGGTCAGCTACCTTTGGAAGTTATAAATTACTTATTTAAAAG
GATATAAGCTTTGGCGAGATAGATTGACAACGATGCTGGTATTCTTTTGA
AGCCAGTTTTAATGCCAATTTGTATTCCCAATCGAGACATACATGTCTTT
TTTCAAGTCTGTATACACAAACAACTTAGAAGATCCCAGTAGAATAAATG
AGCATAGTGTCAAAAACAAACTTAGTCTTAATCCAATTTAAACTTAGTAT
TGTCATAAAGGAGTGAAACTTTCTTTACAGAATAAAGATATTGCCCCAGT
TCGCGCCAAACATCGACGATCAAGATCTTCTGATTACTGGCTTGAACATA
AACCCACGGAGACACTTGCTACTAGTAATAACTTTTTCTTTTATGTTACA
TTTCAAAAAGTAATACCTTCCAAAGAAGGACTGAGTGTCACTTTTTTATG
ATTAGAATATAATATATTTACTATTGTTGGTTTTCCATTCAGATACCGTA
ATGCAGCCAAACTTGAAGAACAAAAAGACGGTGGATATGCCAAAAGTTAA
AGATTTCAAGGTATTGTGTAAAATAAATTTTTTTATTGAATTTCTTTCTC
GCGAAACTCGAATATTTTAAAACACCCTTTTCTTCTCATCGTTCTATCCC
ACTACTAATTGATGAGCCTATGGGTGAAAATTATTTCCATTACATGAACA
CAATGATTCCTGTACATGAAATTATTTGTTTTTTTTCAGTAGAAGGCAGG
TCCTGATAATATTCACGGTTTATTTCTTTTTTTTTATAGCACATTTGGAA
CATGCCAGTAAGATTGCTTTGTCAGTAGCAAGGAGACAAATTTGCAGTTT
ATTCATTTTTTTTCTATTCCTAGTCATTTTCAAGTTATATCAGTTGTTTT
GAGAGTCAAATTGTTCTGCCAGAAGTCCCTCGTTGTGTTGAAAGTCTCTT
TATTAGTGTTCATAAGAATTGATTATATTATGTCAGTTGCTGGGCATTGC
TTTATATGTTTTTGTATTCGACTGTTTCCCGTTCTTGATTTCAGTCAACA
CCGAACTACATCCTGACGCATCAAGAAGAAGATTCTTCCGGTGAAATCGA
AACTAAATTGATTAAGGTACTTCTTTATTATAGTAATTTTTATCCACATC
TGATAATCGTCTTGTGTGTGAAACACTGTAATGGTTGTTTTTAATTTTTG
AAGAAAAATATATTAAATCAAGGTACTTCCTTAATTTTTTTCTTCATAGA
TGCATTTGTGCTTCAGTGCCTAAAAAATTTCAACATGGGGTTATCAGCAG
CCACTTTTCATCCGTACTTTAGAGATGACCTACCTCACTTCTTTCAATTT
TCAGGGAGAAGTAATGAAAACTCGAGGAGGTGGTACTAGTGTTCAATTCA
CCGACATCGAGACTTTGAAGAAAACATTAGAAGCTAAAGGTGGAATCCCC
TCAACTCCTAAACCCCCGAAAACTAATACTAAAACGTGAGTATGCTTTTT
CTTGGGTTTTCAAGCAGTGACGGCTGATAAAAAATTTAATTAGAAATGTT
AAGCTGTTGCTATTAGCTATTTATAGATAATTTTTATTCCATTTCTATTT
TCAGTAAAAAACGAAAATCAGAAGGAGAAGACGAAGGAGCGAGTGATGAT
AGTTGGACCAGCGTCGAAACTCGCGTATGTAGTCATTTCTTGATTCATTG
TTGGTAACTCAAAATCACCTGAAGAATTAATTGTCTGCGTATTATTTAGC
TTTCCATTGATATAAAAATCGTTTTCGTAGCAACTCTCTATCAAAAGTAG
CAAAATTTTGTCTTGTTTTCACTTTCTTGCACGAATTTTAAAAACCAAGT
AGTGAAAACTATAAGCACATTTAGATACCTTTCCAACGATACCAATGAAC
ATGAACTGGTTGGGAAGTTATGGCCAACAAATAAAAACACTGCACACCTT
TTTGAAATATACTTTAAAATGTTTTCTCAAGTTTAATTCTATATAAACGA
TCTTTTGAAGATGCTTATCATTTTCTTTTCAGTGTGCGGTTGGTATTGAA
GGGCGACCAGGGACGTCACCAGGATTAACGCACCATGCCAAGTGAGTTTA
AAATTTTGTTCCCAAGTTTGTTCCTTGGGCCTATTCTTAACTGTCACATT
AGTTTTCAGGTTTTCACGCCGTTTTAATAGTAATGTTTTTTTTGGACCTA
CCCCTGTGGGCTGTAGGTCCTATAAATTAACCTCTGTTCGTTCGTTCGTC
CGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTTACTAGCTTTTCTCGGGAT
TGGCTCATTAGTTTTTCCTAATTTTTGGCACAAAGATGCAAAATGGTAAT
GCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAATTCATTTCCGGCCG
AAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGGCATTTTCTCGAG
ATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAGATGCGTATTAGCA
ATGCCTAAAACATGGATTAGTCCGATTTTTGAGAAAAATTCTATTCCGGC
TGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCAGATTTTCATC
GGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAAAAACATTATTGAT
AGCAATGCCCACCATCAAGCATGGATTAATTGTCAATAAAAGTGATTTTT
GAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTATTTTCGCCGGAAA
AACGGTATTTCTTGAATTTCTCGAGCTGTGCTTTATATTTTTTCATGAAA
TTTTGCAGACTGATGCAAAATGACAATACCTAAAATGTGACGGAGCCCGA
TTTTCGAAAAAAATTCATTTCCGGCCGAAAATGCCGGAAATATGCCGGAA
AAACCGGTTTTTTGGCATTTTCTCGAGATTTCATCATTAGTTTTTTCTGA
TTTTTTGCACAAAGATGCGTATTAGCAATGCCTAAAACATGGATTAGTCC
GATTTTTGAGAAAAATTCTATTCCGGCTGAAAATGCCGGAAATATCCCGG
AAATCGCCGTTTTTGCAGATTTTCATCGGACTTTTTCCTTATATTTCGTT
GTTTTTTCACACAAAAACATTATTGATAGCAATGCCCACCATCAAGCATG
GATTAATTGTCAATAAAAGTGATTTTTGAAGCCGGAACTTTCTAAAAATC
GCCGGAACAGCCTATTTTCGCCGGAAAAACGGTATTTCTTGAATTTCTCG
AGCTGTGCTTTATATTTTTTCATGAAATTTTGCAGACTGATGCAAAATGA
CAATACCTAAAATGTGACGGAGCCCGATTTTCGAAAAAAATTCATTTCCG
GCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGGCATTTTCT
CGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAGATGCGTATT
AGCAATGCCTAAAACATGGATTAGTCCGATTTTTGAGAAAAATTCTATTC
CGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCAGATTTT
CATCGGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAAAAACATTAT
TGATAGCAATGCCCACCATCAAGCATGGATTAATTGTCAATAAAAGTGAT
TTTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTATTTTCGCCG
GAAAAACGGTATTTCTTGAATTTCTCGAGCTGTGCTTTATATTTTTTCAT
GAAATTTTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTCATCTTTAGCTTTT
TCTGATTTTTTGCAGAAAGATGCGTATTTGCAATGCTCAAAACATGGCCG
AGTTCGATTTTTGAGAAAAAGTTTTTTCCGGTTGAAAATGCCGGAAATCG
CCGTCTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATTTTCGCTAAACGATA
TATTTTCTGACTGATTTTTTTCTCCTCGCATTGCTATCTAACTTTCATCA
TCAGGTAGGTCCATTCAGCATCTAGCTTGTTTAGTATGCGCTAACCCCGG
CGCTAACGTCGCTGATAAATGCTCTAAGTTTATTAAATTTTTCGAACCTT
GGAATTGTTTTTTTTTTTCAAACACATCTTCTCGTCATTAGCTCTCTAAC
GCAGGTGATGATCTGTAGTAATCTGTATCTCTGTGTTCGGTAGCTGTCTT
ACGCCATTATTCCCTTTTAAGTAAGTTTACGACGACTTGTTTTTTTCTTT
TTTCAGAAAATCGAAGCATTGAGTAATCGCAGCATTGAAAATTTCGTTGG
TGTGGATGAATAGGTAAATCAAATCGATTAAAGATGGTAGAAGTAGAAGA
AATAACGAAAGAAAATGATTGACGAATTCGTCCTATCTGCTGATAGCTAA
TTATTCTAACCAAGACGATAAAAATATAGAAATATTTTGAATATTGATTT
AATTATCCTAATTTGCCCCTTGTATATTTGTAATCTATTTCTATTTCTTT
ATTTTTAAAATACAATGTATATTTAACCACCTTTAACCTTCAGATCATAT
CGAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_012115	XLOC_012115	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000390	supercontig	sc0000390:243906..258459 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.218247	0	6.63017	0.326089	0.319069	0.0467002	0	0.162103	0	0	0	0	0.078758	0.0943411	0	0	0	0	0.201873	0.26095	0	0	15.5792	13.3082	0.263683	0	0.183965	0.271271

Blast

[Close]

BLAST of TCONS_00021610 vs. Swiss-Prot (Human)
Match: KIF23 (Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3)

HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 377/966 (39.03%), Postives = 567/966 (58.70%), Query Frame = 3

Query:   81 QDPIEVFCRVRP---PNDECEETCVEIFNDGNLQLNAPKT--LKTQSKIEQIQCTFNKVFTESVSQSELFDNVGLPLVEDLLNGKNGLCFMYGITGSGKTHTMNGTPTDGGVLPRCLDVVFNSIGQLQTSRCIFKPDGYNGFDILADVDAKDXXXXXXXXXXXXXXXXXXXXXXXXXXXIP-DSTCL--EIDEDNNYGVFISFVEVYNNSIFDLLDDSCIDPIKNRTPSSKILREDQRRNMFVYDSTEVEVKSTEEAFDLFWKGQNRRKTALTMLNAESSRSHCVFTIRLVQAPLGPNGDSIMKDRNLIGISQLSLCDLAGSERTSRTKADGDRIRQAGHINNSLMTLRSCIETLRENQKSQESGGNSKMVPYRDSKLTHLYKNYFDGDGKVRMIVCLNPSAADFDESVHVVKFAEMTQEVKVARSEGVKFDLGLTPGRGKASKMFKNXXXXXXXXXXXXXXXXXXXMRTVQQFASWPLLELSSFNDATTLPNLLQYLEERIKLRRTLFTDWKQRQDEVRQMILQLEQDNIDLTK------ALDDQRSVLADRERETKQFEKKIRILNEKCDTLQRSSQTYETQKRQVEVELEKQRELVHKERTEKMRLKQALRDLTSSERLRYEKEMDKRVKQTQMEMEGHIFEKSEKLRQLRNVVQHLDVPAENQGKVKKSIREEAPLRAYPQTPASAPHPAVHKSSRRPPIANKP-LHTRTKTTTNAT-----PHGKKKVRSRSPP---PSAGRNKDIAPVRAKH---RRSRSSDYWLEHK---PT--------ETLATNTVMQPN-------LKNKKTVDM-PKVKDFKHIWNM-------PSTPN-----------------YILTHQEEDSSGEIETKLIKGEVMKTRGGGTSVQFTDIETLKKTLEAKGGIXXXXXXXXXXXXXXXXXSEGEDEGASDDSWTSVETRCAVGIEGRPGT--SPGLTHHAK 2765
            +DP+ V+CRVRP   P+ EC   C+E+ N+  +QL+ P+   L      ++ Q +F +VF    +Q ELFD V  PLV DL++GKNGL F YG+TGSGKTHTM G+P +GG+LPRCLD++FNSIG  Q  R +FK +  N  DI  +VDA  E Q+++     +  + + ++D      I     C   E+DED+ YGVF+S++E+YNN I+DLL++   DPIK + P SK+LRED+  NM+V   TEVEVKSTEEAF++FW+GQ +R+ A T LN ESSRSH VF I+LVQAPL  +GD++++++  I ISQLSL DLAGSERT+RT+A+G+R+R+AG+IN SLMTLR+C++ LRENQ      G +KMVPYRDSKLTHL+KNYFDG+GKVRMIVC+NP A D++E++ V++FAE+TQEV+VAR    K   GLTPGR      ++N                      +Q F   P  E+   ND  TLP L++ LE+R  LR+ +  ++ ++ +  + ++ +   DN  L+K       L+++  +++ ++ E ++ EKK + L  K + L++++  YE  KR ++ ELE Q + + ++ ++K RL+  L+ + +   +++EKE ++RV   Q+EM+  ++ K EKL+QL+ +V         +   ++  RE+   R+   +P       + + S    + ++P LH R+ + ++ +        ++K+ + + P    S  R +   P ++K       R   YW E +   PT        E      + QP+       L+++++     +  D K   NM       P  P+                 Y+LTHQE  S GEIETKLIKG++ KTRGGG SVQFTDIETLK+  E+  G         +  +     +  + +GA +  WT VETRC+V +E R G+   PG  HHA+
Sbjct:   23 KDPVGVYCRVRPLGFPDQEC---CIEVINNTTVQLHTPEGYRLNRNGDYKETQYSFKQVFGTHTTQKELFDVVANPLVNDLIHGKNGLLFTYGVTGSGKTHTMTGSPGEGGLLPRCLDMIFNSIGSFQAKRYVFKSNDRNSMDIQCEVDALLERQKREAMPNPKTSSSKRQVDPEFADMITVQEFCKAEEVDEDSVYGVFVSYIEIYNNYIYDLLEEVPFDPIKPKPPQSKLLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFNIKLVQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRTCMDVLRENQMY----GTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRFAEVTQEVEVARPVD-KAICGLTPGR-----RYRNQPRGPVGNEPLVTDV------VLQSFPPLPSCEILDINDEQTLPRLIEALEKRHNLRQMMIDEFNKQSNAFKALLQEF--DNAVLSKENHMQGKLNEKEKMISGQKLEIERLEKKNKTLEYKIEILEKTTTIYEEDKRNLQQELETQNQKLQRQFSDKRRLEARLQGMVTETTMKWEKECERRVAAKQLEMQNKLWVKDEKLKQLKAIVTEPKTEKPERPSRERD-REKVTQRSVSPSPVPLSSNYIAQISNGQQLMSQPQLHRRSNSCSSISVASCISEWEQKIPTYNTPLKVTSIARRRQQEPGQSKTCIVSDRRRGMYWTEGREVVPTFRNEIEIEEDHCGRLLFQPDQNAPPIRLRHRRSRSAGDRWVDHKPASNMQTETVMQPHVPHAITVSVANEKALAKCEKYMLTHQELASDGEIETKLIKGDIYKTRGGGQSVQFTDIETLKQ--ESPNG---------SRKRRSSTVAPAQPDGA-ESEWTDVETRCSVAVEMRAGSQLGPGYQHHAQ 954

The following BLAST results are available for this feature:

BLAST of TCONS_00021610 vs. Swiss-Prot (Human)

BLAST of TCONS_00021610 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF23	0.000e+0	39.03	Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF2...	[more]

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TCONS_00021610 (transcript) - C. hemisphaerica