TCONS_00021613 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00021613
Unique Name	TCONS_00021613
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3050

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000390:243906..258465-

transcript sequence

>TCONS_00021613 ID=TCONS_00021613|Name=TCONS_00021613|organism=Clytia hemisphaerica|type=transcript|length=3050bp
tcttatagaaaattaAAATAGTCACAATGTCAAGAAATGGTATTTTGAAA
ActccaaaaagaaaaactacACCTCAAACTAAGCATCAAGATCCAATAGA
GGTCTTTTGTCGTGTAAGACCTCCTAATGATGAATGTGAAGAGACTTGTG
TTGAAATTTTCAATGATGGAAATCTCCAGTTGAATGCACCAAAGacATTG
AAAACACAATCAAAGATTGAACAGATACAATGCACTTTCAACAAGGTCTT
TACAGAATCTGTTTCCCAAAGTGAATTATTTGATAATGTTGGCTTGCCTC
TAGTTGAAGATTTGTTGAATGGCAAAAATGgattgtgcTTTATGTATGGA
ATAACAGGATCAGGAAAGACACACACAATGAATGGAACTCCAACAGATGG
CGGTGTTCTACCTAGATGTTTGGATGTTGTCTTTAATAGTATTGGCCAGC
TTCAAACAAGCAGATGTatttttaaaCCAGACGGCTACAATGGATTTGAT
ATCTTGGCTGATGTTGATGCTAAAGATGAGGCACAAAGGCAGCAACGTGA
GCTTGAAGTGCAACAGAGAAATATGAGAAACAGAATGGACAACAATGACA
TGATGAGAATCCCAGACTCCACTTGTCTTGAGATTGATGAAGATAACAAT
TATGGTGTTTTCATCTCCTTTGTCGAAGTGTACAATAACTCCATTTTTGA
TTTGCTTGATGACAGTTGCATCGATCCAATAAAGAATAGAACACCATCGT
CAAAAATTCTACGTGAGGATCAAAGAAGAAATATGTTTGTGTATGATTCT
ACTGAAGTTGAAGTGAAAAGTACTGAAGAAGCTTTTGATTTGTTCTGGAA
AGGCCAAAATAGAAGGAAGACTGCTCTTACTATGCTCAATGCAGAATCAA
GCAGAAGCCATTGTGTTTTCACAATCAGGCTTGTTCAAGCGCCATTGGGT
CCAAATGGAGACTCAATAATGAAGgaTCGTAATTTAATTGGTATCAGTCA
GTTATCTTTGTGTGATTTGGCTGGATCAGAAAGAACCAGTCGTACCAAAG
CTGATGGTGATAGGATAAGACAAGCAGGGCACATCAACAATTCTCTCATG
ACTTTGCGATCTTGCATCGAAACCTTACGAGAAAACCAAAAGAGCCAAGA
AAGTGGTGGCAATTCAAAGATGGTGCCATATCGTGACTCAAAACTTACAC
ATCTTTACAAAAATTACTTTGATGGCGACGGGAAGGTTCGAATGATAGTT
TGCTTGAATCCAAGTGCTGCTGACTTCGACGAAAGTGTGCACGTTGTGAA
ATTTGCTGAAATGACTCAGGAAGTGAAAGTCGCCAGATCAGAGGGTGTCA
AgtTTGATCTTGGACTTACACCTGGTAGAGGAAAAGCCAGCAAGATGTTT
AAGAATGTGGTGGAGGATGTGTCAGATGGATTAAGTAGTGACCTTGGAAG
TCAAGAAGATTTGATGAGAACAGTTCAACAATTTGCTTCATGGCCGTTAT
TAGAGCTCTCCTCATTCAATGACGCGACCACGCTTCCCAATCTACTGCAA
TACTTAGAAGAAAGGATAAAACTGCGGCGAACCTTGTTTACCGACTGGAA
ACAAAGACAGGACGAAGTCAGACAAATGATACTGCAACTTGAACAAGATA
ATATTGATCTAACGAAAGCACTGGACGATCAAAGATCTGTTCTTGCTGAC
AGAGAAAGAGAAACAAAACAGTTCGAGAAGAAGATTCGAATTTTGAATGA
GAAATGCGATACATTACAAAGATCATCACAAACTTACGAAACTCAAAAAC
GACAAGTCGAAGTTGAGcttgaaaaaCAAAGAGAGCTTGTCCATAAAGAA
CGAACTGAGAAAATGAGACTGAAgcagGCATTGAGAGATCTAACATCTTC
AGAAAGGCTTCGTTACGAAAAAGAAATGGATAAACGTGTAAAACAAACAC
AAATGGAAATGGAAGGACACATCTTTGAAAAATCCGAAAAACTCCGTCAA
CTTCGAAACGTCGTCCAACACTTGGATGTTCCTGCTGAGAACCAAGGCAA
GGTGAAGAAATCGATAAGAGAAGAGGCACCTCTTCGAGCTTACCCACAAA
CGCCTGCTTCCGCCCCGCACCCAGCAGTTCACAAATCGTCACGTCGACCA
CCCATAGCTAACAAACCTCTGCATACACGTACGAAAACCACCACCAATGC
AACGCCTCACGGAAAGAAGAAAGTTCGATCTCGATCACCTCCACCCTCTG
CAGGAAGGAATAAAGATATTGCCCCAGTTCGCGCCAAACATCGACGATCA
AGATCTTCTGATTACTGGCTTGAACATAAACCCACGGAGACACTTGCTAC
TAATACCGTAATGCAGCCAAACTTGAAGAACAAAAAGACGGTGGATATGC
CAAAAGTTAAAGATTTCAAGTCAACACCGAACTACATCCTGACGCATCAA
GAAGAAGATTCTTCCGGTGAAATCGAAACTAAATTGATTAAGgGAGAAGT
AATGAAAACTCGAGGAGGTGGTACTAGTGTTCAATTCACCGACATCGAGA
CTTTGAAGAAAACATTAGAAGCTAAAGGTGGAATCCCCTCAACTCCTAAA
CCCCCGAAAACTAATACTAAAACtaaaaaacgaaaatcagAAGGAGAAGA
CGAAGGAGCGAGTGATGATAGTTGGACCAGCGTCGAAACTCGCTGTGCGG
TTGGTATTGAAGGGCGACCAGGGACGTCACCAGGATTAACGCACCATGCC
AAaaaatcgaaGCATTGAGTAATCGCAGCATTGAAAATTTCGTTGGTGTG
GATGAATAGGTAAATCAAATCGATTAAAGATGGTAGAAGTAGAAGAAATA
AcgaaagaaaatgattgacgAATTCGTCCTATCTGCTGATAGCTAATTAT
TCTAACCAAGACgataaaaatatagaaatattttgaatattgattTAATT
ATCCTAATTTGCCCCTTGTATATTTGtaatctatttctatttctttattt
ttaaaatacaatGTATATTTAACCACCTTTAACCTTCAGATCATATCGAC

Run BLAST on NCBI

transcript from alignment at sc0000390:243906..258465-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00021613 ID=TCONS_00021613|Name=TCONS_00021613|organism=Clytia hemisphaerica|type=transcript|length=14560bp|location=Sequence derived from alignment at sc0000390:243906..258465- (Clytia hemisphaerica)
TCTTATAGAAAATTAAAATAGTCACAATGTCAAGAAATGGTATTTTGAAA
ACTCCAAAAAGAAAAACTACACCTCAAACTAAGCATCAAGATCCAATAGA
GGTAGGTCTCTTTCTACTTAATAATGACTTGTGCTATTTTTACTACAGTT
TCTGCTAGGGACCATTCAAAAAGTATGTATGGTCTGAGGGGGGATGGGGG
TCCTTTTAAGAGCATACCCCAAAGCTAGCTAAAGTGCACCTGGGGTTTCA
AGCAATGTTTATAGGCTGTTGCTTTACAGTTTTTGATTTGTTTTTTCCCA
GCTTTTCTCTCAAGGCTCGAAATAAAGATTTCAAGTGGGTCGGACAAAAT
GTCCGATCAGGGTTGCTTTAGCTTGAAAATTATGATTTTTGGGTCAGACA
TGAAGCTATTTGGGTCGGACAATGTCCAATGTCCGACTGTTATTTCGAGC
CCTGTTTTCTAATCGTTCTAATTCAAAAAATAAGAATTTAAGTCACTTTT
CCATTTGACATCCTAGAAGAAGTTTCAGCACAAATGTAAAATGTAATTAT
TATTGTTATAATGTCTATTATTGTTATTATTATTTTGATAGGTCTTTTGT
CGTGTAAGACCTCCTAATGATGAATGTGAAGAGACTTGTGTTGAAATTTT
CAATGATGGAAATCTCCAGTTGAATGCACCAAAGGTATTGCCCGTTTAAA
TTCTCTTATTCTTTCTAACAAACCTTTTTCACTGTTTCCCACTTGAAACA
ATAACATTGCATATCGTCAACCCCCTTGACTTTGGGGGGGGGGGTTACAC
CCAAAATAATGCAAATGAAAACCGGGAGCTAAAATACCTGAAAATACAGC
CAAATATTAGGGGACTGGAATTTCAGTGGCAAAGCTGCGGGCTGACTATT
TCTTCTATTATTTTTCTTTATATTAGCCTAAAATTTCGTCCTCGCTTCGC
TTGTGTTATTTTTGAAGAGATTTTTACTTATTATAGCGGGCTGCTGAAAA
ACTTTTAATATTTGGTGAGACCTATTTTTTTGCCTTGGACCTAGACCTGG
GCTGACCCTATGATTGGTTGTTACAAAGTATTCAACTTTTCACCTTAAAA
GAAAATCTTTTTATAAATTAAGCCTCAATGTCAAAATAATGAATTTGAAA
TATGGCAAGTAATGATATTGACCATTGTATTTTCTATTTTCAGACATTGA
AAACACAATCAAAGATTGAACAGGTAAGATTTCTTGTCCCTTGGCATACC
AGCTAGAAAAGAAAAATCCTATTTTCTGCATTACTAGCTGGGTGAATTAA
TGTTATTGAATGCCTAGCTACAAAAAGTTTGGAAAAAGTTGAAAGTGAAA
AGGTAGGAAGATAAAGAGGGCCAGCTTTTTTATTTGATGCAAGATGTTGC
AGAGAGTTTGCATTTCTATTGGTTTTTTGATTTTTTAATTACTTGCTCAG
GTAATTATATACATTACAATAATTTATTGCTCTTTATTCAGATACAATGC
ACTTTCAACAAGGTCTTTACAGAATCTGTTTCCCAAAGTGAATTATTTGA
TAATGTTGGCTTGCCTCTAGTTGAAGATTTGTTGAATGGCAAAAATGGTA
AGTCAACAATCTCAATCCCCTGATTGGAATCCATCTCTTTTTTACTTCAT
AAAGACAAATCAATCAGAATTCATCTGTCTTATAGTAATCATGTGTACAT
AAGAATATTTATTTATTTTTTGGTAAACTTTTTTGAAATAAAAATGAAAT
GACTTTCTCCCCAATACCCTACTCATTAACTTTGGGAGAATATTTTCCTT
TGGATCAAAAGGAAAGCTGATATTTTGTTTTAAGTCTCCTTTTCAAATTT
ACACTACATAATATTTTTCAGGATTGTGCTTTATGTATGGAATAACAGGA
TCAGGAAAGACACACACAATGAATGGAACTCCAACAGATGGCGGTGTTCT
ACCTAGATGTTTGGATGTTGTCTTTAATAGTATTGGCCAGCTTCAAACAA
GCAGATGTGTAAGTTTCGCCAACAAGTTTTCATAAACTTCTAGTGAAATG
CTGATGCAACTCTCTTATAGATTTTGTAAGGTAGATATACGGTTGCAAAG
CTGTGGAAATTAATCTGAGTTTTTCAAAGGGGATATATATGTATATGGAA
GATATTTCACTTTCTACAAGATATTTTTCAAAGGGTTTCCTTGGATGAGT
TCTACATTACAGTGCTTTCTTTGCAATAGCTCTTGCTTGTTAATCCTTTT
GATAGATTTTTAAACCAGACGGCTACAATGGATTTGATATCTTGGCTGAT
GTTGATGCTAAAGATGAGGCACAAAGGCAGCAACGTGAGCTTGAAGTGCA
ACAGAGAAATATGTAAGATATTATGAAAATAAACTGGAAGCAATTATTAT
TATGCAAGTAATTTTGATGATTCTTTTAGAAAAACGGTTTGTTAAAATGT
TTCAATTATTGAAATTGTTCTCTCTAATAATTCCTGCATGTTCCAATTCA
CAGAGAATAGGTTGGATTTTAAGTCAACACCATTTTGAATTCTCTGTAAA
TTAGCTTGCTTTTTTGTTTTGAAAAAGCTGATTAGCTTTTGATTCAGATT
TATGTACCAAGATCTATGAACATTTTTCCTTTACAGGAAATGTTGACTGA
CAATTTCTTCTTATTTTCTAGGAGAAACAGAATGGACAACAATGACATGA
TGAGAATCCCAGACTCCACTTGTCTTGAGATTGATGAAGATAACAATTAT
GGTGTTTTCATCTCCTTTGTCGAAGTGTACAATAACTCCATTTTTGATTT
GCTTGATGACAGTTGCATCGATCCAATAAAGAATAGGTATTTATCAAGCA
CAGGATTTTCTTGTTGGATATCAATTAATAACCAGGAGAAACTTAGATAT
AATCCTTCAACTTTCGTGAAATTTGTACAGCATTTTCCTTAGGGTCAAAA
GAAAAGCTGGTATTCAAAAAGCACCTTAATCATCAAAACACATTACTTTG
GTTTCTAAGATAAAGTGGACCGAATGGCCTATTGTACAAATTTAATTTTG
TACTTACAAAATAATTTACAATAAATTGCATGTATTTTACTCTCTTTAGA
ACACCATCGTCAAAAATTCTACGTGAGGATCAAAGAAGAAATATGTTTGT
GTATGATTCTACTGAAGTTGAAGTGAAAAGTACTGAAGAAGCTTTTGATT
TGTTCTGGAAAGGTAATTTCATAGGATGCTTTGAATTTCCTAAGCTTTTC
TTCAGATTACATTTTACAAAATAATAGGGTTGCTAAGGACCTGAAAACCA
TATAAACCATAATCTTGAAAATCAAATAAAATTTGGCTAAAAACCTTAAA
ACTGTCAGAAATACAATAAACACACACTGTAATAAAACACAATTATATCA
TAATTTGAAATACTTTTTTTTTTGTATTAACTAGGGTTTCTTTTAATAGA
AACTGAAACTCACCCCAACCACACATGTTATCAGTTCCTTCATTGAAAAT
TTTCCCAATTGTTAAGTTCTGTTTGGAGTGAATTAGCATGACTGATTTTT
AGAATGAATCGTGAGCCAATAATCACATTTTCTATTCAGGCCAAAATAGA
AGGAAGACTGCTCTTACTATGCTCAATGCAGAATCAAGCAGAAGCCATTG
TGTTTTCACAATCAGGCTTGTTCAAGCGCCATTGGGTCCAAATGGAGACT
CAATAATGAAGGTAACATATGAAAATCTTTGCAATATGATATATCAAAGC
TCCCTTGGAACTGTGAAACATTTTAATATTCTTTTGTAGTGGACTTTCTT
TTGAATTTCCTAAGGAAACTTTTCTTGGAGATTCGTCAAATCTTGTAATG
GTTCATAATAGCATGTTGACATTGAAACAAAAAATTATTTTTNCAACGTG
AGCTTGAAGTGCAACAGAGAAATATGTAAGATATTATGAAAATAAACTGG
AAGCAATTATTATTATGCAAGTAATTTTGATGATTTTTTTACAAAAACGG
TTTGTTAAAATGTTTCAATTATTGAAATTGTTCTCTCTAATAATTCCTGC
ATGTTCCAATTCACAGAGAATAGTTTGGATTTTAAGTCAACACCATTTTG
AATTCTATGTAAATTTCCTTTACAGGAAATGTTGACTGACAATTTGTTCT
TATTTTCTAGGAGAAACAGAATGGACAACAATGACATGATGAGAATCCCA
GACTCCACTTGTCTTGAGATTGATGAAGATAACAATTATGGTGTTTTCAT
CTCCTTTGTCGAAGTGTACAATAACTCCATTTTTGATTTGCTTGATGACA
GTTGCATCGATCCAATAAAGAATAGGTATTTATCAAGCACAGGATTTTCT
TGTTGGATATCAATTAATAACCAGGAGAAACTTAGATATAATCCTTCAAC
TTTCGTGAAATTTGTACAGCATTTTCCTTAGGGTCAAAAGAAAAGCTGGT
ATTCAAAAAGCACCTTAATCATCAAAACACATTACTTTGGTTTCTAAGAT
AAAGTGGACCGAATGGCCTATTGTACAAATTTAATTTTGTACTTACAAAA
TAATTTACAATAAATTGCATGTATTTTACTCTCTTTAGAACACCATCGTC
AAAAATTCTACGTGAGGATCAAAGAAGAAATATGTTTGTGTATGATTCTA
CTGAAGTTGAAGTGAAAAGTACTGAAGAAGCTTTTGATTTGTTCTGGAAA
GGTAATTTCATAGGATGCTTTGAATTTCCTAAGCTTTTCTTCAGATTACA
TTTTACAAAATAATAGGGTTGCTAAGGACCTGAAAACCATATAAACCATA
ATCTTGAAAATCAAATAAAATTTGGCTAAAAACCTTAAAACTGTCAGAAA
TACAATAAACACACACTGTAATAAAACACAATTATATCATAATTTGAAAT
ACTTTTTTTTTTGTATTAACTAGGGTTTCTTTTAATAGAAACTGAAACTC
ACCCCAACCACACATGTTATCAGTTCCTTCATTGAAAATTTTCCCAATTG
TTAAGTTCTGTTTGGAGTGAATTAGCATGACTGATTTTTAGAATGAATCG
TGAGCCAATAATCACATTTACTATTCAGGCCAAAATAGAAGGAAGACTGC
TCTTACTATGCTCAATGCAGAATCAAGCAGAAGCCATTGTGTTTTCACAA
TCAGGCTTGTTCAAGCGCCATTGGGTCCAAATGGAGACTCAATAATGAAG
GTAACATATGAAAATCTTTGCAATATGATATATCAAAGCTCCCTTGGAAC
TGTGAAACATTTTAATATTCTTTTGTAGTGGACTTTCTTTTGAATTTCCT
AAGGAAACTTTTCTTGGAGATTCGTCAAATCTTGTAATGGTTCATAATAG
CATGTTGACATTGAAACAAAAAATTATTTTTAATTTCAGGATCGTAATTT
AATTGGTATCAGTCAGTTATCTTTGTGTGATTTGGCTGGATCAGAAAGAA
CCAGTCGTACCAAAGCTGATGGTGATAGGATAAGACAAGCAGGGCACATC
AACAATTCTCTCATGACTTTGCGATCTTGCATCGAAACCTTACGAGAAAA
CCAAAAGAGCCAAGAAAGTGGTGGCAATTCAAAGGTAGCAATGATAATCT
GTCGATGCCATGAAATAAGTGGAACTTCTCCTATGAGATAAATTGTATCT
AGTGCAGTAAATAGTTTAGTTTAATTTAACCACCCCCTAACCAAATAACA
AGCGTCTTTGTTCATTCCTTGATCTTATAAGGTTTCAATTCTTCTTTCAG
ATGGTGCCATATCGTGACTCAAAACTTACACATCTTTACAAAAATTACTT
TGATGGCGACGGGAAGGTTTGTATTCACTATTGCTTTTTTTAGTATTGGT
GATTAGTATATCTCTTCATGTCTCTTTTCTCAAACGCCTATAATAATTCA
ACCCTTATTACTATTACTATTTAGGTTCGAATGATAGTTTGCTTGAATCC
AAGTGCTGCTGACTTCGACGAAAGTGTGGTAAGTATTTGCTCAATATTAT
TATCAAAAAAAAGAATACCATCTTCAAATTAATCAAGATTACAACTTAAT
GGTAATGACTTACCTTATTACACTAATATATTACTAGTCATTTTATTAAC
ACGAACTGAAAAATTTTGTGTTAATAAAAAGACTCTTAATTAAAACCAGC
TGTGGTCTCCTTGAAAAAGCAATAAAATTTGTGTTAATTTTTTGCGTGTT
AATTTCAAGGCCGTGTCTACTTACTTTCGTGTAATAAGGTAGATGTAATT
TTGTATCTTTGTTTTACAGCACGTTGTGAAATTTGCTGAAATGACTCAGG
AAGTGAAAGTCGCCAGATCAGAGGGTGTCAAGTAAGTAACTTATTACTTT
GGTTAACACCCTTTTCTAAATGACTCAAATGAATAGATTTAATGGGATCT
AGAGGCGATATATCATTTGTTATATAAATAATTTACTTGTTCATTTCGAT
TCATTTCAATATTAAGCTATTGCCCTAATTGATAGCTGTTAAATGCTGGG
CAAATGTAATTAATTTGTTTTTAAATTTTTTAAGGTTTGATCTTGGACTT
ACACCTGGTAGAGGAAAAGGTATGAAAATTTCTGATCGTTGTCACCTTCA
TTTTTATGATATTATGTTTTTAGAAACCTCTCTCCCCTGGACTACCACAC
TTATTTTTTACTTTATTTCCAGCCAGCAAGATGTTTAAGAATGTGGTGGA
GGATGTGTCAGATGGATTAAGTAGTGGTAAGTCAAATCATTTCGTTTCTT
AGAATTATGATAAGTGTATAGGCTTTTATCATGTTTAATTGCTCGTTCAA
TATCGATCAGATTTTAGTCAAAAATGACCTGTGGACGCAAAATTTGATTT
GATTTGAACTTGCCCAATCATCCTGAACCGTCGTGATTATGACCACCATA
TATTTTCCTTTAGACCTTGGAAGTCAAGAAGATTTGATGAGAACAGTTCA
ACAATTTGCTTCATGGCCGTTATTAGAGGTTAGTAGTTCATCTCCTGTTC
CTTCACAACTCTTACAGTCATATTTTGAAAAAGTGGACCACTTTATAAAA
GTTATACCTCAAAATTTAGGTTTGGCTGTGTTCTCTAATAAAAGTTTTTC
TGATCTCTTTTTGTTAGCGTTTTTATTAACTTTAGGATGATTAGAAAAAG
GTGTTTGTTGAACAACGTTTCAATTTTTGATCAAATTATTCTATTTCCAT
AGCTCTCCTCATTCAATGACGCGACCACGCTTCCCAATCTACTGCAATAC
TTAGAAGAAAGGATAAAACTGCGGCGAACCTTGTTTACCGACTGGAAACA
AAGACGTATGAAGAATATTTTGATTTGCAACAACATTCGATCAACTATAA
TGAGAAATGTCCCTGCATTTTATATAGAAAGATAGCACAAGGTTCTTTTT
GTGTTATTGCAGTCAACGCGATTCATCTAGTTCCATGGTTTTTGATTTTA
TTTCAATGATATATCATTCTTCTTTTACAGAGGACGAAGTCAGACAAATG
ATACTGCAACTTGAACAAGATAATATTGATCTAACGAAAGCACTGGACGA
TCAAAGATCTGTTCTTGCTGACAGAGAAAGAGAAACAAAACAGTTCGAGA
AGAAGATTCGAATTTTGAATGAGAAATGCGATACATTACAAAGATCATCA
CAAACTTACGAAACTCAAAAACGACAAGTCGAAGTTGAGGTATGCTCATC
AAACTTTCAATTAAAATTGAACTTGTATTGTTTTAGTATAGTTGACTAAT
TGATTGAATTTAATAATTTGTTAATTCCATTTTTAGCTTGAAAAACAAAG
AGAGCTTGTCCATAAAGAACGAACTGAGAAAATGAGACTGAAGCAGGTAA
ATTTTGTTTTTGATCGTTTGAAAATTTTCCATTTTGTGCAACAAAGTCAT
CAAGTTGTAGCCTGGCAAGTGCATTAAAACAAAGTTTTTTTCTTAAGTTA
TTGCCAAACAATATAAAAATATTATATGTATTTCATTATAGGCATTGAGA
GATCTAACATCTTCAGAAAGGCTTCGTTACGAAAAAGAAATGGTATGTTT
TCTTCAGTCTTTTTTATAAACTTTTATATCTATGAAAAGTGAAACGAAGA
TATTATCCTAGCCTGTACCACCCCACCCACAGGCGTTTTTATATTTTGAA
AAAACATTACCGTGTGTCGGTTGGTTGCGGTTAGCGAGATTCTACGTGTC
TCAGTTTGTCCCAATTTTCTGGGACAAAATCCTAAAAAATACAAGCGTAG
GAGTGCTCTTTTGAAAATTGAAAGATACCATTGCATTGACGCGTTAAAAG
TAACGTCACTTTAGTTGAGCTACAATCATAGACAAAATATTTGAGACAAA
GGTGATTTCCCGGCGAAATTTTAAATACCACAAATGGTTTTTAAGCACCT
TAAACTACAGTTGGAAAGTAGAGTTTTAACTTTGAGTTTTAACATGAGAC
TTAAGACTTAGGACCTTTGGATTTCAGGATTTAAAAACTCAAATTTGCTC
GAATAAGGCTTGGAATATAGCCTAGAAGCCACCGAACCCCTATAAAATCG
AAATATTCAATGAAAGAAAGTGGAAGTGCTAAAATAGCAATTCTCGCAGA
TTCTCGTCCGAACTTTAAATTCTGAAAAACGTTAAAAATCTCAATATATT
TCGACCATGATTATAGATTGAATGCTAAAAATAGCTACGCTCCACCACAG
AGACATACAGAGTTTTGTGGAAAAAAGTGCGAGACACGGAATGTTAACCG
AACAAACCGAACTTCGAGTTATCTTTTCAGTCAGCAAAGAAGAGTTTGGT
ACAGGCTAATATTATCCATGCAATAGGTTTTCTTCTCAAACATGGTTGAA
ATGGTCATCTTACTGCGAAGTTTCCTGTCGACGTATGAAATTTTAACGTT
TTGGCTTCATTTTTATGAAAACTTTTTTACTTCAGGATAAACGTGTAAAA
CAAACACAAATGGAAATGGAAGGACACATCTTTGAAAAATCCGAAAAACT
CCGTCAACTTCGAAACGTCGTCCAAGTAAGTTTAAGCATTCTCTTATTTA
GTTGTGGACAACAATTTAATGTTGACGTTTCATCAGCGTCATAAAGTATT
TTATATTCGGCTGAAAGTGCGTAAAAATCTCTACAAATTTCGACTACTTT
TGAAACACTTTCAGCACTTGGATGTTCCTGCTGAGAACCAAGGCAAGGTG
AAGAAATCGATAAGAGAAGAGGCACCTCTTCGAGCTTACCCACAAACGCC
TGCTTCCGCCCCGCACCCAGCAGTTCACAAATCGTCACGTCGACCACCCA
TAGCTAACAAACCTCTGCATACACGTACGAAAACCACCACCAATGCAACG
CCTCACGGAAAGAAGAAAGTTCGATCTCGATCACCTCCACCCTCTGCAGG
AAGGGTAAGTAAGCTTTTATAAGGGAGAAACTTTCCGCTGAAAATTTATT
TTTTAGATGTTTTATGGTCAGCTACCTTTGGAAGTTATAAATTACTTATT
TAAAAGGATATAAGCTTTGGCGAGATAGATTGACAACGATGCTGGTATTC
TTTTGAAGCCAGTTTTAATGCCAATTTGTATTCCCAATCGAGACATACAT
GTCTTTTTTCAAGTCTGTATACACAAACAACTTAGAAGATCCCAGTAGAA
TAAATGAGCATAGTGTCAAAAACAAACTTAGTCTTAATCCAATTTAAACT
TAGTATTGTCATAAAGGAGTGAAACTTTCTTTACAGAATAAAGATATTGC
CCCAGTTCGCGCCAAACATCGACGATCAAGATCTTCTGATTACTGGCTTG
AACATAAACCCACGGAGACACTTGCTACTAGTAATAACTTTTTCTTTTAT
GTTACATTTCAAAAAGTAATACCTTCCAAAGAAGGACTGAGTGTCACTTT
TTTATGATTAGAATATAATATATTTACTATTGTTGGTTTTCCATTCAGAT
ACCGTAATGCAGCCAAACTTGAAGAACAAAAAGACGGTGGATATGCCAAA
AGTTAAAGATTTCAAGGTATTGTGTAAAATAAATTTTTTTATTGAATTTC
TTTCTCGCGAAACTCGAATATTTTAAAACACCCTTTTCTTCTCATCGTTC
TATCCCACTACTAATTGATGAGCCTATGGGTGAAAATTATTTCCATTACA
TGAACACAATGATTCCTGTACATGAAATTATTTGTTTTTTTTCAGTAGAA
GGCAGGTCCTGATAATATTCACGGTTTATTTCTTTTTTTTTATAGCACAT
TTGGAACATGCCAGTAAGATTGCTTTGTCAGTAGCAAGGAGACAAATTTG
CAGTTTATTCATTTTTTTTCTATTCCTAGTCATTTTCAAGTTATATCAGT
TGTTTTGAGAGTCAAATTGTTCTGCCAGAAGTCCCTCGTTGTGTTGAAAG
TCTCTTTATTAGTGTTCATAAGAATTGATTATATTATGTCAGTTGCTGGG
CATTGCTTTATATGTTTTTGTATTCGACTGTTTCCCGTTCTTGATTTCAG
TCAACACCGAACTACATCCTGACGCATCAAGAAGAAGATTCTTCCGGTGA
AATCGAAACTAAATTGATTAAGGTACTTCTTTATTATAGTAATTTTTATC
CACATCTGATAATCGTCTTGTGTGTGAAACACTGTAATGGTTGTTTTTAA
TTTTTGAAGAAAAATATATTAAATCAAGGTACTTCCTTAATTTTTTTCTT
CATAGATGCATTTGTGCTTCAGTGCCTAAAAAATTTCAACATGGGGTTAT
CAGCAGCCACTTTTCATCCGTACTTTAGAGATGACCTACCTCACTTCTTT
CAATTTTCAGGGAGAAGTAATGAAAACTCGAGGAGGTGGTACTAGTGTTC
AATTCACCGACATCGAGACTTTGAAGAAAACATTAGAAGCTAAAGGTGGA
ATCCCCTCAACTCCTAAACCCCCGAAAACTAATACTAAAACGTGAGTATG
CTTTTTCTTGGGTTTTCAAGCAGTGACGGCTGATAAAAAATTTAATTAGA
AATGTTAAGCTGTTGCTATTAGCTATTTATAGATAATTTTTATTCCATTT
CTATTTTCAGTAAAAAACGAAAATCAGAAGGAGAAGACGAAGGAGCGAGT
GATGATAGTTGGACCAGCGTCGAAACTCGCGTATGTAGTCATTTCTTGAT
TCATTGTTGGTAACTCAAAATCACCTGAAGAATTAATTGTCTGCGTATTA
TTTAGCTTTCCATTGATATAAAAATCGTTTTCGTAGCAACTCTCTATCAA
AAGTAGCAAAATTTTGTCTTGTTTTCACTTTCTTGCACGAATTTTAAAAA
CCAAGTAGTGAAAACTATAAGCACATTTAGATACCTTTCCAACGATACCA
ATGAACATGAACTGGTTGGGAAGTTATGGCCAACAAATAAAAACACTGCA
CACCTTTTTGAAATATACTTTAAAATGTTTTCTCAAGTTTAATTCTATAT
AAACGATCTTTTGAAGATGCTTATCATTTTCTTTTCAGTGTGCGGTTGGT
ATTGAAGGGCGACCAGGGACGTCACCAGGATTAACGCACCATGCCAAGTG
AGTTTAAAATTTTGTTCCCAAGTTTGTTCCTTGGGCCTATTCTTAACTGT
CACATTAGTTTTCAGGTTTTCACGCCGTTTTAATAGTAATGTTTTTTTTG
GACCTACCCCTGTGGGCTGTAGGTCCTATAAATTAACCTCTGTTCGTTCG
TTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTTACTAGCTTTTCT
CGGGATTGGCTCATTAGTTTTTCCTAATTTTTGGCACAAAGATGCAAAAT
GGTAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAATTCATTTC
CGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGGCATTTT
CTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAGATGCGTA
TTAGCAATGCCTAAAACATGGATTAGTCCGATTTTTGAGAAAAATTCTAT
TCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCAGATT
TTCATCGGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAAAAACATT
ATTGATAGCAATGCCCACCATCAAGCATGGATTAATTGTCAATAAAAGTG
ATTTTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTATTTTCGC
CGGAAAAACGGTATTTCTTGAATTTCTCGAGCTGTGCTTTATATTTTTTC
ATGAAATTTTGCAGACTGATGCAAAATGACAATACCTAAAATGTGACGGA
GCCCGATTTTCGAAAAAAATTCATTTCCGGCCGAAAATGCCGGAAATATG
CCGGAAAAACCGGTTTTTTGGCATTTTCTCGAGATTTCATCATTAGTTTT
TTCTGATTTTTTGCACAAAGATGCGTATTAGCAATGCCTAAAACATGGAT
TAGTCCGATTTTTGAGAAAAATTCTATTCCGGCTGAAAATGCCGGAAATA
TCCCGGAAATCGCCGTTTTTGCAGATTTTCATCGGACTTTTTCCTTATAT
TTCGTTGTTTTTTCACACAAAAACATTATTGATAGCAATGCCCACCATCA
AGCATGGATTAATTGTCAATAAAAGTGATTTTTGAAGCCGGAACTTTCTA
AAAATCGCCGGAACAGCCTATTTTCGCCGGAAAAACGGTATTTCTTGAAT
TTCTCGAGCTGTGCTTTATATTTTTTCATGAAATTTTGCAGACTGATGCA
AAATGACAATACCTAAAATGTGACGGAGCCCGATTTTCGAAAAAAATTCA
TTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGGCA
TTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAGATG
CGTATTAGCAATGCCTAAAACATGGATTAGTCCGATTTTTGAGAAAAATT
CTATTCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCA
GATTTTCATCGGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAAAAA
CATTATTGATAGCAATGCCCACCATCAAGCATGGATTAATTGTCAATAAA
AGTGATTTTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTATTT
TCGCCGGAAAAACGGTATTTCTTGAATTTCTCGAGCTGTGCTTTATATTT
TTTCATGAAATTTTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTCATCTTTA
GCTTTTTCTGATTTTTTGCAGAAAGATGCGTATTTGCAATGCTCAAAACA
TGGCCGAGTTCGATTTTTGAGAAAAAGTTTTTTCCGGTTGAAAATGCCGG
AAATCGCCGTCTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATTTTCGCTAA
ACGATATATTTTCTGACTGATTTTTTTCTCCTCGCATTGCTATCTAACTT
TCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTAGTATGCGCTAA
CCCCGGCGCTAACGTCGCTGATAAATGCTCTAAGTTTATTAAATTTTTCG
AACCTTGGAATTGTTTTTTTTTTTCAAACACATCTTCTCGTCATTAGCTC
TCTAACGCAGGTGATGATCTGTAGTAATCTGTATCTCTGTGTTCGGTAGC
TGTCTTACGCCATTATTCCCTTTTAAGTAAGTTTACGACGACTTGTTTTT
TTCTTTTTTCAGAAAATCGAAGCATTGAGTAATCGCAGCATTGAAAATTT
CGTTGGTGTGGATGAATAGGTAAATCAAATCGATTAAAGATGGTAGAAGT
AGAAGAAATAACGAAAGAAAATGATTGACGAATTCGTCCTATCTGCTGAT
AGCTAATTATTCTAACCAAGACGATAAAAATATAGAAATATTTTGAATAT
TGATTTAATTATCCTAATTTGCCCCTTGTATATTTGTAATCTATTTCTAT
TTCTTTATTTTTAAAATACAATGTATATTTAACCACCTTTAACCTTCAGA
TCATATCGAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_012115	XLOC_012115	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000390	supercontig	sc0000390:243906..258465 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.6373	20.8853	15.1228	12.6186	2.8379	0.110507	0.361258	0.00917069	26.0903	38.485	30.0658	19.126	10.5434	9.65577	17.9962	19.2739	41.7011	31.9601	5.30922	6.68072	12.1335	11.5132	26.7973	18.1152	0	1.38922e-09	5.97901	0.0234846	19.5336	16.6323

Blast

[Close]

BLAST of TCONS_00021613 vs. Swiss-Prot (Human)
Match: KIF23 (Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3)

HSP 1 Score: 550.821 bits (1418), Expect = 5.459e-179
Identity = 292/657 (44.44%), Postives = 433/657 (65.91%), Query Frame = 3

Query:   87 QDPIEVFCRVRP---PNDECEETCVEIFNDGNLQLNAPKT--LKTQSKIEQIQCTFNKVFTESVSQSELFDNVGLPLVEDLLNGKNGLCFMYGITGSGKTHTMNGTPTDGGVLPRCLDVVFNSIGQLQTSRCIFKPDGYNGFDILADVDAKDXXXXXXXXXXXXXXXXXXXXXXXXXXXIP-DSTCL--EIDEDNNYGVFISFVEVYNNSIFDLLDDSCIDPIKNRTPSSKILREDQRRNMFVYDSTEVEVKSTEEAFDLFWKGQNRRKTALTMLNAESSRSHCVFTIRLVQAPLGPNGDSIMKDRNLIGISQLSLCDLAGSERTSRTKADGDRIRQAGHINNSLMTLRSCIETLRENQKSQESGGNSKMVPYRDSKLTHLYKNYFDGDGKVRMIVCLNPSAADFDESVHVVKFAEMTQEVKVARSEGVKFDLGLTPGRGKASKMFKNXXXXXXXXXXXXXXXXXXXMRTVQQFASWPLLELSSFNDATTLPNLLQYLEERIKLRRTLFTDWKQRQDEVRQMILQLEQDNIDLTK------ALDDQRSVLADRERETKQFEKKIRILNEKCDTLQRSSQTYETQKRQVEVELEKQRELVHKERTEKMRLKQALRDLTSSERLRYEKEMDKRVKQTQMEMEGHIFEKSEKLRQLRNVV 2015
            +DP+ V+CRVRP   P+ EC   C+E+ N+  +QL+ P+   L      ++ Q +F +VF    +Q ELFD V  PLV DL++GKNGL F YG+TGSGKTHTM G+P +GG+LPRCLD++FNSIG  Q  R +FK +  N  DI  +VDA  E Q+++     +  + + ++D      I     C   E+DED+ YGVF+S++E+YNN I+DLL++   DPIK + P SK+LRED+  NM+V   TEVEVKSTEEAF++FW+GQ +R+ A T LN ESSRSH VF I+LVQAPL  +GD++++++  I ISQLSL DLAGSERT+RT+A+G+R+R+AG+IN SLMTLR+C++ LRENQ      G +KMVPYRDSKLTHL+KNYFDG+GKVRMIVC+NP A D++E++ V++FAE+TQEV+VAR    K   GLTPGR      ++N                      +Q F   P  E+   ND  TLP L++ LE+R  LR+ +  ++ ++ +  + ++ +   DN  L+K       L+++  +++ ++ E ++ EKK + L  K + L++++  YE  KR ++ ELE Q + + ++ ++K RL+  L+ + +   +++EKE ++RV   Q+EM+  ++ K EKL+QL+ +V
Sbjct:   23 KDPVGVYCRVRPLGFPDQEC---CIEVINNTTVQLHTPEGYRLNRNGDYKETQYSFKQVFGTHTTQKELFDVVANPLVNDLIHGKNGLLFTYGVTGSGKTHTMTGSPGEGGLLPRCLDMIFNSIGSFQAKRYVFKSNDRNSMDIQCEVDALLERQKREAMPNPKTSSSKRQVDPEFADMITVQEFCKAEEVDEDSVYGVFVSYIEIYNNYIYDLLEEVPFDPIKPKPPQSKLLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFNIKLVQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRTCMDVLRENQMY----GTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRFAEVTQEVEVARPVD-KAICGLTPGR-----RYRNQPRGPVGNEPLVTDV------VLQSFPPLPSCEILDINDEQTLPRLIEALEKRHNLRQMMIDEFNKQSNAFKALLQEF--DNAVLSKENHMQGKLNEKEKMISGQKLEIERLEKKNKTLEYKIEILEKTTTIYEEDKRNLQQELETQNQKLQRQFSDKRRLEARLQGMVTETTMKWEKECERRVAAKQLEMQNKLWVKDEKLKQLKAIV 658

HSP 2 Score: 139.813 bits (351), Expect = 1.485e-33
Identity = 76/168 (45.24%), Postives = 104/168 (61.90%), Query Frame = 3

Query: 2259 NKDIAPVRAKHRRSRSS-DYWLEHKPTETLATNTVMQPNLKNKKTVDMPKVKDFKSTPNYILTHQEEDSSGEIETKLIKGEVMKTRGGGTSVQFTDIETLKKTLEAKGGIXXXXXXXXXXXXXXXXXSEGEDEGASDDSWTSVETRCAVGIEGRPGT--SPGLTHHAK 2753
            +++  P+R +HRRSRS+ D W++HKP   + T TVMQP++ +  TV +   K       Y+LTHQE  S GEIETKLIKG++ KTRGGG SVQFTDIETLK+  E+  G         +  +     +  + +GA +  WT VETRC+V +E R G+   PG  HHA+
Sbjct:  799 DQNAPPIRLRHRRSRSAGDRWVDHKPASNMQTETVMQPHVPHAITVSVANEKALAKCEKYMLTHQELASDGEIETKLIKGDIYKTRGGGQSVQFTDIETLKQ--ESPNG---------SRKRRSSTVAPAQPDGA-ESEWTDVETRCSVAVEMRAGSQLGPGYQHHAQ 954

The following BLAST results are available for this feature:

BLAST of TCONS_00021613 vs. Swiss-Prot (Human)

BLAST of TCONS_00021613 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF23	5.459e-179	44.44	Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF2...	[more]

You are here

TCONS_00021613 (transcript) - C. hemisphaerica