TCONS_00021651 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021651
Unique NameTCONS_00021651
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1529

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021651 ID=TCONS_00021651|Name=TCONS_00021651|organism=Clytia hemisphaerica|type=transcript|length=1529bp
GTTGCgagagaaagtgaaagtggGTAATTCTGTTCacttttctgccatct
ttgcaCAGGACAGacaAAATAAATGATTAAGAACCTTAAATGAGTCAACA
TTTGAGAAAACTTTACATCAGTTCAACTTTGTATCGCTCAATATTGAAAC
AATCTTTCTGTTCTTTGACTACTGCATCTGGTGGTGGTGGGGATGGTGGT
GAAGGTGGACATATTGTAGACTTAGTTGTATCATCATTGAGAATTGATAG
AATTATTGCAACCACTCTTGGTACTGGTAGAAgaaaagtgGAATATAATT
TGTTAAAGGGTTTGGTCAAATTGAATGGACAGACTGTTACAAAGAAAAGT
GTAGAGGTTTCAGAAGGAGACATCATTGATCAATTCTCACTAGAGAACAC
AACCGATTCTGTTTACAATCTCAATCGGATTCAATTATTGGAAATCGCTG
AAAACACAACGAAAAAAGGAAACTTGAGAGTGAAGCTGTACAAGAAAAAG
AACCTATCCATCGATAAAGAAGACTACCGTTTCGAATTCAATACAGAGGC
TGATACCTAATAAACTGAAATCTATTTGTTTGATAGAGTACTACTAAGTT
GAATATCCGGGTTGAATAGCAATAGCGAAGAGAACCCTCAATCTAAATCT
AAACCTTGAAACTAACCtgataattgataaaaagattGCTAACTAAATTT
CTGTATCCACTTAACGCAAACGATGGATTTCAACTTGATTTTTAGAGTTA
CACTTGGCTTGCTCGGTCTTTTCCTGTCCGTTTATTCATTATTTGTGGAG
ATGCAGGCACATGCTGACAAGAATTACAAAGCAATGTGTGACATAAGCGA
ACGTGTTAGCTGCACCAAAGTCTTTTTATCCGATTTCGGACGTGGCTTTG
GATTGGTTGCTCCTATCTTCGGTAAAGATTCACCATTGAACCTACCTAAT
CCTGTTTTTGGcattgttttttattctttgGTCATTTTGATATCGTTGTT
CAAAAGTAATAAAGGTGGCTTGAGATTGTTGACAACTCTGGCTGGTGTGT
CATGTTTGATGAGCCTTTACTTGGCAAGTATTTTATATCGAATGAAAGAT
ACTTGTTTGGTGTGTATCTCGACCTATATTGTCAATTTCGGATTATTATA
TTTCTCGTTCAAACGATTTAATGAGTATGTTGTAATGGAGAAATATAAGA
GTGAATAAATTAACAGTAGAAGGATTCGTATTGATTTTTTAATGATACGT
AATGCCAAGGAATCATATTGAGTTATCAGGCTTGCTGGTagatttctcat
cttttaccgAAGGACAGCTTTTTAAATATATTGAAATATACAATGATGAt
gatttatataatttttaagaattctttGTAAAATAACTAAACATGCTTTA
TTATAATTATCACGAAAAAGTGAAAGGTAATTATTAAAGGAGTACCATGT
TTctctttttatatttataacgcttataagcatatgaaagCTCCgggtta
aatatttcctaagcataacatatcATAAG
Run BLAST on NCBI

protein sequence of TCONS_00021651-protein

>TCONS_00021651-protein ID=TCONS_00021651-protein|Name=TCONS_00021651-protein|organism=Clytia hemisphaerica|type=polypeptide|length=161bp
MDFNLIFRVTLGLLGLFLSVYSLFVEMQAHADKNYKAMCDISERVSCTKV
FLSDFGRGFGLVAPIFGKDSPLNLPNPVFGIVFYSLVILISLFKSNKGGL
RLLTTLAGVSCLMSLYLASILYRMKDTCLVCISTYIVNFGLLYFSFKRFN
EYVVMEKYKSE
Run BLAST on NCBI

transcript from alignment at sc0000391:57427..69761-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021651 ID=TCONS_00021651|Name=TCONS_00021651|organism=Clytia hemisphaerica|type=transcript|length=12335bp|location=Sequence derived from alignment at sc0000391:57427..69761- (Clytia hemisphaerica)
GTTGCGAGAGAAAGTGAAAGTGGGTAATTCTGTTCACTTTTCTGCCATCT
TTGCACAGGACAGGTAAGACCATATTTTTTTCTAACTTTTTCTAACAATC
TCTTTTTCTTTTCCTTTGATTTGTTTTCCCTATTTCTTTCTCCATGCTGA
TGGTGGTTGTTGCTGGTGGACTGGCTGGAGAACAGTGGTAGTGGAAGAAG
GGTTATTATACCGGGTGACCCACGAAAAAGTTCAGACGTTTCTCGACGTC
TTGAGGCTGAAAAAATGTCCCAAATGCTTGGAGTTTTGATATTTAGAAAG
TAGATATCCTAACTTAAAATTTGAGCCATCACTTTTTGAATTTGACCAAC
TTGTTCTCTACACTTATGAGCTTTTAAAGTCAAAATTCACTTTTCAAAAA
GTGTAAAAAACATGCAATAAAGAGGTATAAAATTCATGCAATCAATTAGA
AAATCACTTACAAATTGACTAATTTAACGAGTTTTTTGACATTAATAATT
AGTAAAAACACCTTTGAAAGTAATTTTTGTTTAAAACAAGACTAGTTTTT
ATAAAAATTGGCGCTTTCATAGATTTTTTTCAAAAACTGTATATCAAAAA
CGTCTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAATACCAAATTTGATACCCCTTTTTTACGTGTTTTTTACACTTTC
CGTAAAGTGAATTTTGACTTTAAAAGCTCATAAGCAGAGAACAAGTTGGT
CAAATTTAAAACGTGATAGCTCAAATTTTAAGTTAGGATATCTACTTTCT
CAATATCAAAACTCCAAGCACTTTGGGACATTTGTTCGACCTCAAGACGT
CGGGAAACGTCCGAACTTTTTCGTGGGTCACCCGGTAGTAGAGGGAGGTT
GTTGAGGGTCGCGCCTGCATGCAGCCTGCGGCAGTAACAAAAGCAGGACT
TTTGAAAAAAAATCTTCAAACTTACATAAATCCAGGACAAATTCTTTTTC
CAACTTCAAGAGAATTTCTTCAGCTTTCTTTTAATAAAGAAATTTTCATT
CAAGATATGTGTTTTCGTTATATAGTTCTTTCAAAATTTAAAAATGAGTA
CTCGCGGTGCGCTTTTCATACTTCTTGTTCACGGCACAAGAAATTTTTTT
ACCAGGCAGTTAGTCACACTAGGAAATCTAGCTTTCAGAAAAAACAGCAT
CAGTCATGTACACGATGTATTTGCACAACAAGGATGAGAGTTACCTGAAT
CAAGTTTCGCAAGACAATTAATTAAAACTTGAAAGTTTGAAACAAAATAA
AAAGTGCAGCAGCCAAAATCAACCAACCAAAATTTGTCATTCAATTCCAG
AGACAGCGCTTTTTAAGGCTTTGTTTATACGCTAAAGTAAAAGTAATTCC
GCACATGTAAATGGGTCGTTGTTTGATGTCCGGCAAAATTTCCGGGAAAC
AGCCTATCCGGTGGTGCGCGGATCTAGGTGGGTTCCGCCTCCCCCGTAGA
TCTTTTTCTTGGGAAGTTCATCATCAAATTAGTTTTCAAGGTTGGCTTGG
CTCAAATTTTTTCATCTATGGCTCAAATTTTAGGCAATTTCTCAAAGCTT
TTGAAAATGTTAATTTCATTGAAAAGCGCCGGGTTATTTTTTCATGAATC
CCTTTAGAAGTTTTGCGGTGCATTTTTTTGCTTGAGAGTCAAGTAAATGA
TATAGCGCTTTAGTAGCATTAATCTTTGATACGCATTTTGGCGGGACGCT
AGTGTCACTAACTGCCAGGGGTAACTAAAATCAAAAGCGCTAGCCATCGG
AGGCAGCTATCGGACTGAATTTTTTTGCATTTTCCCCCGTATTAGTTTAG
CTTTTGAAAAACGTACCACGTTGGCTGACTAGCTAGAGCGTTCTACTTTT
TTCAGGAAGTTAAAATAAGCACTTAAACTACATTTTAATTTGTTGTGAAA
GAGATTTAACAGTATTGGTTTGATAATTAAAGATCATGCAAGATCATAAA
TTTCAAGATGGCCGCAATTCAGACATTTCTTCACGATAGAGTATGAGCTG
GGAGCGGAGCTGCATAGTTCATTTGCTTTGAAATTTTGCTGCTTTGATTG
GTCAGCAGTTGGGTGTTTAAGATAAAAGCGGCAATTATTTCTCTTTTCAG
CAATTATTGCCGAAAACGGCAATTTTTTCAGCGATGAAGAATCATCAGCA
GAAAAATAAAGAAAGTAAATAAATGAAAATTACCGTTTTCGGCAATTATT
GCTGTTTTGGAAAGAAAAATTGATTTTATTATAACACGTGGTATTTGAAA
CCTCGCGATAAGTAGGCCAACTGTGCCTCGTTTAGTTTTGTTTTCAAGTG
GTTTTTGTTGGAGATGCAGTTAGCAAAATCGAGTCACATGTAAACAAACT
TACAACAGGGTTTTGTTATCTCTTTCTGGCTGTGTTTCGGCATCAATGCA
GGATCTTTTTGCATATTAATTTAGAACTTTTCATGTTATTGAGCAACGAA
AAATTGAAAAAATCACTTTTAAAAAACCTTTTTCTCAATGCAATTTTACA
AAAATTTTCAAACACCTCTGACATCTTTGCCCTTATAGGTACAACATATT
TTGCTGATTCAGCATTTCATCGTTGAAAAAATTGCTGTTTTTGGAAATAC
TTGTCGAAAAGGGCAATAATTGCCGTTTTTATCTTAAACACCCAACTGGT
CAGGCATTTGATAGCCATGCAAGTTTCCCTCCACCGATGCAAGTTACCCG
ACTTCACGGTTTCAAATCAAGTATGTATATAAATAGACCAGTAAAAAAAA
AACTTTTCTTTTTTTTTCTTTTTTTGCAAAAGTTCCAGAAATGAAAATAA
AGTGATCATGATAATTGAATACACGCTTTTTTTTATGAGAATAGTGTACT
NATGAATAGAAAAGAGCATGTAGCAGATACACGAATTCTATGAAATAGGC
TAATGTATAAAGTAATGGAGGAGGAGGAGGCGCAACCATGGTTTGCGCCG
ACGGAGAAAATTTTCCCAATTTTGTCTTCNACATATAAGTACAACATATT
TTGCTGATTCAGCATTTCATCGTTGAAAAAATTGCTGTTTTCAGAAATAA
TCGCCGAAAAGGGCAATAATTGCCGTTTTTATCTTAAACACCTTAGTCTT
GCCTTAGGCAAGGGCTTTCTTTATTAGGAAAAGAAAACTTTTTAAATTAG
GAAAGTGCTCAACAAAGTGACCTTTTCTCCTAATCATGTAGTTGCAAGTT
AACCATGACCATGAATTGTGGGGGGCGTACGGGGGTTGCCAACACCGAAA
TACCGACAGATTTTTCTTAAATCACCGCAATACCGACACAATTTCCCGAA
AACACCGACACCGACGTTTTTATGGGCAAGCTTATAAGATTTTTCTATTC
TTAGTACGAATGCTCAATCTCATGAGCGTAGTAGTGCACTAGTTCAGTTT
TTCTTGGAGTAAACTATCGCCAATTCAAGGGTTTCAATAGCCTGGATATC
CAAGCTCAAAATTTTAGAAAAAACTAAATTTACCTCAACATACAAAGTTC
TAAAATTATAGAGCTTGGTCTCTCTAGAGAATGAAAGTGAAAACCCATGT
TTCCAAGCCAACCCAGGGCAGCAAAACAGAAAGTAATAAAAAGCAGTCTT
ACAAGATCTAAAACTATTTAAAACATCCAAAGATTACACCAAAGTCCATA
AAAAAGTTTGCATGCATTATCCAGCATTATCATGACCAACCATGTTTTCT
TGGAAAATGAACTTGCCTCTGTTTTCTTCTTTTTCATGTTTTCATGTAAC
AGAAAGCCCTATCTNAGCTCTTTTTGAACGTCATTAGAGCTAAAGTCTGT
CCAAATATAATTGGCAGTGGAAACAAGAATGCCTGTAACTTTTGATAGTC
AAATATAATTATGGAAGTTTTTTTTGCTTGTTTCAGAGAATCAAAAGCGC
TATATTTCAATGTATTTTTGGTTGAAAAATTCGCGATTTTTATCGGTTAA
ATTTGCGATTGTAAAAATTGAGCTTTTTTTCTACTTGTGCTATAACGTTC
ATTTTTACACCAGTGGTAGTTCAACCTTAGGTTAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
TGCACTAGTTCAGTTTTTCTTGGAGTAAACTATCGCCAATTCAAGGGTTT
CAAATCTTTAAAGCTCAGTTTTTCAACGACTAGTGGACAAAAAAAGTATA
TAGGGAACGCTTTGAATGCTACTTTTTACTTGAGTGTTTATTTNATTATG
TTATCTTTTTTGAACAGTGCAATTAAAAGTTGGAAAATGTTAACATTGGT
ATTATTGGTATGTTTGATTATTTCGAAACCAAGTGAAATCACAGTATAAT
TGGTTTTATTGAAAAGATAAGCATGAATATTGACTTTGTTATTTTTAAGT
CACTAATTCTAAAGAAGTTTGCTAATTCCCAAAACACTAAACACAGTTTG
GCTATGAGGTCATTAAAGAGATCGTAAAATGTGTTATTGTCAAGAAACTG
TTTTATCAATCATATCACTACCCCCGTTTTTAAAAAACACATTCATGATT
ATTTTTGAAAAACTTTTTCACAGTGATGACGTTCGATAATCAAGGATTCA
CTCCAGTGAAAATGAAAGTTAAAGCACTTCTCTACAAGATCTTCATTTTT
TTCTTCTTCATTTTCATCTTCGTTTTTAGAATTTTTTTAAAGATTTTTTT
ATTTCAAATTGTTCCACTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATATCTTTGCAATGATACC
AAATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAA
AAGAGTGCACACTTATCGTGAACAGACTTTACACGTTTTTAACCCTTTCT
CCAGTTTTCAGATTAGGCAAAGACGCCCTCGAGATTTTTTCTACTAGGAC
GGGCCGTGAAACTGTGTAAAATACATTTTAGTACACATTTTTTATAAGCA
ATCATGTTGCTAAATCTCAAGGTCTCATAATTAGCAGGTTTTTTTTGCTA
TCTCGTAAAGTGAAAGCTTTTTAGATAATCTAGCTATGGCAAACGATATC
CCTTGATCCAATAAACATACAGATTCGGAGAACCCCTCCCAATCCCAAGC
AATAGGTTTTCTAATCATTCACGGGCCGAAACCCCTGAAGCCTTAGCATA
TTTCTCATTAAAATGTCTTTTAAACGCTTTAACCAGACTAAATTATACAA
ACCCCCAATCAAATTGAAACATTCTCGAAAAGGGTCGCAAAACGATTGAA
ACAAAACCACCCGGCATGAATTGCTCGTTTGATTTAGGCTGAAACTAAAT
TGGTATTGACAGTCTGCAAAGGGAGCTCTGCAAGGGGAGGACCACAGGAA
CTATTTTATATTGAACAGGTTTGGCCCGAGGAGGCAAAATTTGAAATTTA
AAGTGCCCAAAATGCTGAGAAACGCATCTAAATTATGAGTTAATGGATTA
TTCCGTTAATATGAAAGAATTAATGATTCTTGATTTTTGATGAGTGCTGC
ATTTGAGATCTCGAGAAAGCTTGCCACACGCTGCAAATGCTTTCTTTATC
TGTTACCCACTGGGTAGAGTACCCGGGGGGGGGTACTAGGGTTGGCGAAT
GAGGGGTATGTGCGTACGGGACCTCCGAAAACCGACCCTTAGAGAGACCA
AGTTTTAGTGAAAAAGTGACCCTTAGAGAGACTTTTTCGAAAAATTTTCT
CAGATTTTCAAAAGTTTCCTACCCTTAGTGAGACTTTTTTGTAATTTTTT
CTCTCAAAATCAAAATTTTTTTCTAGAAATCGTGATTTTTCCCACCCTTA
GAGAGACTACTTTGAAATTTCCTGATTTTTGTAACCCTTAGAGAGACTTT
GAAAGGTGAAAAACCCGACCCTTACCGTCTGCACATACCCAGCACCTATT
TTTGCCTAAGTACCCCCCCCCNNNNNCCCCCCCCCTTCCCCCCCCCCAAA
CCCCCCCCCCCTTTTTGCCCAAGGTCCCCCCCCCCCCGGGTAGATGATTT
TTTTTCAAAACATGCACATTTCCGGTAAACAAGAGGTTAAGAGGTTAAGA
AACACCATTATTCACACAATTTTAAGAAAAAGAGGATGAGACAGGGTAGC
TACTAAAAATAGCTATAATACTATAGTACTTCAATTCTTGTAGAGATAAG
ATATTCAATAGCTGAAATGCAGATTCAAAAACTTTTTTGAGATCCTTTGA
AATATGCAGATTCACCGACAGTAATTATCGAATTACCGAAATACCGACCC
AAAAAATTCATTTTACCGTCACCGCAAGGCATGTCCAACACCGAAATACC
GACACTTTTCCCTTAAAACACCGAAACACCGACGCAAAAAAGGGTCAATG
CCGACACACCGACAAACCCGTACGCCCCCCCCCTGAATTCTATGTGCAAA
ATACATGAAATCTAGGAAATTTAGGAAATTTCTTGCATTAAAGTTTCAGA
CATATCTTGAAATAAGTGTATAAAGGGTTTTATCGGGTTAGTGTGTTTCC
AAAAGCCATATCTTAACATTTGCCCGCTTGAACTACAATTTGAAACTTTC
GATTTCTCATAAGGAGGTTGATATCTATCAAATTATGCTGATGGGAACAC
GTGATTTTTCGTATTTCTTGCAAAATTTATGGAAATAGTTTTACTTTCCT
ACAGTAATTTGGAAAGTTTTCCTTTCCTAATCAGAAAAGCCTGTCCTTAC
TTAGAAAAGTCGGGAAAATTGTAGTCTGGAGACCATACTCTGTTACAAAA
ATATTTCTATACTGTCAAAATCCCAACAACTTCACTGAAATACAGAGTAT
GGAATTATTGAGTCAATTCAAATCACTTCAAATCACAAAAGGAAAAAAAC
GTTATCTTTTCAAAACAATTTAAAAGCTCGCGCCACTTCTTGAAACAATA
GAGCTGTTTGACATCATACTTTTGTTTATCAAATCATAACAATAAGATAT
TAGCCAACCAATCTGCGATTGGTTCTTGCATCTTGTATAATTCCCGGCTA
CTATACTGTGTCTATACTTTGATATTTTTTTAAAAACCACACAGACAGAG
AAGTCGGGTCTCCCAGCTAGGAAAATTGTAAAATACTTTTTTTAATTAGG
CAAAAACTCCTGACTGTTCTCTAGGTATACTATAACTTGGTCTAGTGATG
ACATCATTCGTCTTTAAAAGCTGAAACTAATAGAAAGGTCAAAACTATTT
ATTTTTTTGCTAAGTGGTCAAAGAGGAAAAATCATTTTCAATCAGTGATT
CCAACCTTCACATTATTCCTATCTCTGAAGATTCTACCATCTTCCTGACT
TTCCTAATAAGGGTCCAAGAAAACTTTTCAAATTAGGAAAGTAAGACTAA
GGGGAAGGGGTGGATTTTATGGTTTCTCAGTATTTTTAAGACTTTGGGAG
TCTACAAGGAGCTTTAATTGTAAGGAAGACTTCCCTCTTTTTTCAATGTT
TGACAGCATTAGTGGTGACCCCCTCAGGAGATCTTGTAAATCCTGATATG
AATTTAAGTTGGCAATCAACAAAATCTTTTGTGACCCTCTTTCTTTGCCA
AACTACACGTTTTTTCTATATAAGGAACACGTTTATAAGGAACTCAAGGC
TGACAATTTTGAAATATCTAATTTTCAAAATTTTCAAAGTCACCCTCGAA
TGTCTCTCCGCGATGGCTAGCCATGATAGCTGGACTACTCCAATCATTAA
AATAGTTTTACAAGATATCTTGGTTGTGGGTAGATTTAAGCAATCCAAGA
TCTTCTTTCCTTGCCAGTAGATTAAAAAAATGGCAGTCTCCATTCGATTT
GCTTTCTGACTTACTCGAGCATTTTTTACCTTTTTAAAGACAGGAAGCAG
TTTTTCTAAAAAATGAGCTTGATAAAAGTAGCAAAAAATTGCTTTAGTCG
GTTTTCTTAAAACATATTGTATTGAAAATTGTCTTATTTAATTTTCCTTG
GAAATATTTTCTTTACGCAATTTTCCTTGGAAAATACAAGAAATCGTTTA
CATATTTCTTATAAAAGTAAAAAATACAGTTTTAACTTCTCAAAAATGAT
AGCGAGCTTATTTATCATAGTAAAGCCGAGTTGTGTCCGATGACGTCGGG
ACAGCTATTATTGTGTATTTTCTGTGTTCATTTTCTTTAAGCAATTCAAA
TTTTTTTCTTTAGACAAAATAAATGATTAAGAACCTTAAATGAGTCAACA
TTTGAGAAAACTTTACATCAGTTCAACTTTGTATCGCTCAATATTGAAAC
AATCTTTCTGTTCTTTGACTACTGCATCTGGTGGTGGTGGGGATGGTGGT
GAAGGTGGACATATTGTAGACTTAGTTGTATCATCATTGAGAATTGATAG
AATTATTGCAACCACTCTTGGTACTGGTAGAAGGTAAAAATGAAATAATT
ATGATAAAATTAGTGAATTCTCTTCAACTCGAACCTCTATTACTCCAAAG
TCTCCTTTTCCTTTATCTCTCGAACAAGTTTTATGGTCCCTTCCTTTTTT
TAACAATACCTTATAAACCATACTAAAATTTCCTCAGCTCGAAAGAATTT
GTGTGCCCCTGTGCGTGTTTGAGTTATGGATTACCTGTAGGTTTAAATTT
GATATCAGATTGCTTCTTTAGCGATTCTAAATTCTAAAACTGGGACTACC
ATGATTTTTTTTTTACTTAAAAAAGTTTAACTTTTACGAATAAAATTTGA
ATTAGATATACTTGAGTAGGGTTGTCATTAAACAGGATACGTTTAATGTT
TTCTTTTCTTTTTCAGAAAAGTGGAATATAATTTGTTAAAGGGTTTGGTC
AAATTGAATGGACAGACTGTTACAAAGAAAAGTGTAGAGGTAAAGTTACT
ATGAAAGAGGAGCTTTAGGTGAAATGGTTTTTTTAAATTCCCTCGAAATT
TCTTCTTAATTTCTTAAAAAGCAACGAGAGATTACATCCCTGTTCCAATT
TATGGAAATTCCATCGATTTTCCTTACATGGGTAAATAAGGTAATAAAGA
ATTCACTTAGATTTAGATTTAGATTTGAAATTTAAAACATCACCAAGCCT
ATTGAAATTTTATATCTATTTTTTGTCAATTTTTGAGCCTCAGGTAACTT
AGGGTAAGCATTAGTCTAAGTGTGAGTCTAAGTTGATGAAGAAAATGTTT
GACCTGTCTTCCTGTGTCATGCTTTACAAATTAAAAATTTGAATAACTTT
TTCCTGATCGATCAGGGGGGGGCAAGCAGTTAGTACACGACACCCATGAC
ACTTAGTACCGTGGTGGGTCCATTTTTCAAATTTTCAAAATGCAGTTAGT
ACACCAGTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GAAAATTTCGAACTTTCGAACGTTTTCTGTTTTGTTTTGGTAATCCGATC
ATCCGATCCATAATCGGGAAAAATAGAAAATTATCTAAAGATGGTGGATA
AGTTCCTGAACAAACATGCTGTGTTTTCTGTCTAAAAAATGTTTCTGGAA
AGTCATTATTGTCACTTTAACTAGGTTTACTAGTATTTTCATTGACTAAC
TGGTAAATATTCATTTTGAAAAAAAAATTATTCATCAATTTTTCCCCCCA
CTGCGGTTGACCTACTCCATAATTTGTTATATTTTTATTTGTTTAAAAGT
AGTTAGTGGTAAAGCCCTGGTAAAGACAGGTAAAAACGTAAAAATATACC
TCATAAAACCTCCCTGGGGTGTGAAATTCACCTGGTACGCACCGTAGAGA
GACGGATCCTTATTTTGGGGGGTGGTATATATATTGAGCAAGGTCAAAGA
CAGTTAGTACACGGTGTACTAAGTGACATGGGGTGATGGTGGGGTACAGA
TTTTTCCAAAAATCAGTTAGTACACATAGTGTTCTGTACTAACTGCTTGC
CCCCCCCCCTGGATCGATTCCAATTTTTGTTCTTTCTGACGTTGATTTTT
AATTTCACTGAAATATGAATCTGATGAATTTATAATATGAATCCTTTTCA
GAACTGTTTCATACCTACCTTAGCGTTTATTTAGACCATGATTTTAGTTA
AATATTTAAAAGTTTCAATTCAGCTGAAACAATATTTTATTCCTATGAGT
TTGTATGAATCGCTTTTATTAAACAAGATCTGGCAGTTTTGATCTTTGGG
AAGTTTCGATTTTGTTTTTTATTATATTAATTTTAACGATTTGCTAACAT
CTCTCTGGTCTATATATTACACGATTACCAAAAAGGTAAGTATAATTTCC
ACTACCCTTACTCTTCTCTTATGTTTTGAATACTACTTTGAGATATCTTA
AATTTCATCAAGCACTCAGTTTTAACTACTTTCATAAAAAAATATTCAGA
AGACCTTACAAACTACTGGCATTAACTTTGTTTATTTAAATGTTTTTCTA
ATTATTTGACAGGTTTCAGAAGGAGACATCATTGATCAATTCTCACTAGA
GAACACAACCGATTCTGTTTACAATCTCAATCGGATTCAATTATTGGAAA
TCGCTGAAAACACAACGAAAAAAGGAAACTTGAGAGTGAAGCTGTACAAG
AAAAAGAACCTATCCATCGATAAAGAAGACTACCGTTTCGAATTCAATAC
AGAGGCTGATACCTAATAAACTGAAATCTATTTGTTTGATAGAGTACTAC
TAAGTTGAATATCCGGGTTGAATAGCAATAGCGAAGAGAACCCTCAATCT
AAATCTAAACCTTGAAACTAACCTGATAATTGATAAAAAGATTGCTAACT
AAATTTCTGTATCCACTTAACGCAAACGATGGATTTCAACTTGATTTTTA
GAGTTACACTTGGCTTGCTCGGTCTTTTCCTGTCCGTTTATTCATTATTT
GTGGAGATGCAGGCACATGCTGACAAGAATTACAAAGCAATGTGTGACAT
AAGCGAACGTGTTAGCTGCACCAAAGTCTTTTTATCCGATTTCGGACGTG
GCTTTGGATTGGTTGCTCCTATCTTCGGTAAAGATTCACCATTGAACCTA
CCTAATCCTGTTTTTGGCATTGTTTTTTATTCTTTGGTCATTTTGATATC
GTTGTTCAAAAGTAATAAAGGTGGCTTGAGATTGTTGACAACTCTGGCTG
GTGTGTCATGTTTGATGAGCCTTTACTTGGCAAGTATTTTATATCGAATG
AAAGATACTTGTTTGGTGTGTATCTCGACCTATATTGTCAATTTCGGATT
ATTATATTTCTCGTTCAAACGATTTAATGAGTATGTTGTAATGGAGAAAT
ATAAGAGTGAATAAATTAACAGTAGAAGGATTCGTATTGATTTTTTAATG
ATACGTAATGCCAAGGAATCATATTGAGTTATCAGGCTTGCTGGTAGATT
TCTCATCTTTTACCGAAGGACAGCTTTTTAAATATATTGAAATATACAAT
GATGATGATTTATATAATTTTTAAGAATTCTTTGTAAAATAACTAAACAT
GCTTTATTATAATTATCACGAAAAAGTGAAAGGTAATTATTAAAGGAGTA
CCATGTTTCTCTTTTTATATTTATAACGCTTATAAGCATATGAAAGCTCC
GGGTTAAATATTTCCTAAGCATAACATATCATAAG

Coding sequence (CDS) from alignment at sc0000391:57427..69761-

>TCONS_00021651 ID=TCONS_00021651|Name=TCONS_00021651|organism=Clytia hemisphaerica|type=CDS|length=486bp|location=Sequence derived from alignment at sc0000391:57427..69761- (Clytia hemisphaerica)
ATGGATTTCAACTTGATTTTTAGAGTTACACTTGGCTTGCTCGGTCTTTT
CCTGTCCGTTTATTCATTATTTGTGGAGATGCAGGCACATGCTGACAAGA
ATTACAAAGCAATGTGTGACATAAGCGAACGTGTTAGCTGCACCAAAGTC
TTTTTATCCGATTTCGGACGTGGCTTTGGATTGGTTGCTCCTATCTTCGG
TAAAGATTCACCATTGAACCTACCTAATCCTGTTTTTGGCATTGTTTTTT
ATTCTTTGGTCATTTTGATATCGTTGTTCAAAAGTAATAAAGGTGGCTTG
AGATTGTTGACAACTCTGGCTGGTGTGTCATGTTTGATGAGCCTTTACTT
GGCAAGTATTTTATATCGAATGAAAGATACTTGTTTGGTGTGTATCTCGA
CCTATATTGTCAATTTCGGATTATTATATTTCTCGTTCAAACGATTTAAT
GAGTATGTTGTAATGGAGAAATATAAGAGTGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012141XLOC_012141Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021651-exon-sc0000391-1575043694:69699..69761TCONS_00021651-exon-sc0000391-1575043694:69699..69761Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1575043694:61079..61298TCONS_00021651-exon-sc0000391-1575043694:61079..61298Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1575043694:60623..60695TCONS_00021651-exon-sc0000391-1575043694:60623..60695Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1575043694:57427..58599TCONS_00021651-exon-sc0000391-1575043694:57427..58599Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1510915933:69699..69761TCONS_00021651-exon-sc0000391-1510915933:69699..69761Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1510915933:61079..61298TCONS_00021651-exon-sc0000391-1510915933:61079..61298Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1510915933:60623..60695TCONS_00021651-exon-sc0000391-1510915933:60623..60695Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1510915933:57427..58599TCONS_00021651-exon-sc0000391-1510915933:57427..58599Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1491911889:69699..69761TCONS_00021651-exon-sc0000391-1491911889:69699..69761Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1491911889:61079..61298TCONS_00021651-exon-sc0000391-1491911889:61079..61298Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1491911889:60623..60695TCONS_00021651-exon-sc0000391-1491911889:60623..60695Clytia hemisphaericaexon
TCONS_00021651-exon-sc0000391-1491911889:57427..58599TCONS_00021651-exon-sc0000391-1491911889:57427..58599Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021651-proteinTCONS_00021651-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000391supercontigsc0000391:57427..69761 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.1379	51.4271	12.8923	9.55941	37.6608	27.0441	26.2501	30.1508	24.6685	28.2592	18.4274	20.2653	15.7106	11.8864	17.3203	23.1301	19.9748	18.2131	7.64465	11.866	14.8263	18.4444	32.5699	29.6087	23.1634	21.5456	15.2844	10.5238	25.9413	25.2102
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012932VKOR
Blast
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BLAST of TCONS_00021651 vs. Swiss-Prot (Human)
Match: VKORL (Vitamin K epoxide reductase complex subunit 1-like protein 1 OS=Homo sapiens GN=VKORC1L1 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 4.669e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 3 
Query:  729 FNLIFRVTLGLLGLFLSVYSLFVEMQAHADKNYKAMCDISERVSCTKVFLSDFGRGFGLVAPIFGKDSPLNLPNPVFGIVFYSLVILISLFKSNKGGLRLLTTLAGVSCLMSLYLASILY-RMKDTCLVCISTYIVNFGLLYFSFKRF 1169
            +  + R  +   G+ LS+Y+  VE +   D  ++A+CD+   V C+    S +GRGFGL+  IFGKD  LN PN VFG++FY L +L+ +  S    L L+T+ + +S + SLYLA ILY  +K+ C++CI TY++NF LL  ++KR 
Sbjct:   14 WERVARYAVCAAGILLSIYAYHVEREKERDPEHRALCDLGPWVKCSAALASRWGRGFGLLGSIFGKDGVLNQPNSVFGLIFYILQLLLGMTASAVAALILMTS-SIMSVVGSLYLAYILYFVLKEFCIICIVTYVLNFLLLIINYKRL 160
The following BLAST results are available for this feature:
BLAST of TCONS_00021651 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VKORL4.669e-3041.22Vitamin K epoxide reductase complex subunit 1-like... [more]
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