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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021852 ID=TCONS_00021852|Name=TCONS_00021852|organism=Clytia hemisphaerica|type=transcript|length=1220bp
tttgatcatttggcggctctattcccaggagaataatttgccgtcagccg
aataaggattgttttttaccttcgcgggtgatttttcagtttgagattct
gtccaatgttatggtcttttgaagtgcttgttctaagagattagtgaata
taattgtttttagttttcaagagaagcaaatttaatcttccttctacaag
attacactttaatataatgccaattatgcatgtaagtttttatttaatac
tttctttttgcatatgttttgcatactttctaagggaatttcaccacggc
aattcggcaaccataatttttgcatacaattcaatatggcggacgcaaag
gcgaaaaggtctatccaAAGTTtgctctattttgtttttgccaTTCATCA
ATTTTGTTTAACTGTATATCAATAAGTATTTACATACAATACATATATAC
ATCTGTGATAAAAAGCTGATATGATAATCAGACTGTACAGACTGTATCGT
ATAAAAGTCCAATAAGTTTCATGGTGTTTCATGCCGTCTGGCATGGGGCA
TGGATGGCGCACAATGACCAAACCAATGTTGTTGAATAAACGTCAATGTA
AACAATGGCAGTGAAAACTTGCATGGAGATCATAATCATCGGCCAGCATG
ATTCAACAccattgattttttgaaaattttatttccagTCACCAACCATT
TCATATTCACATATTGATTTGTCttgtttttcttgtaaaaaaaagttgtC
GGTAGCTGCTAGTTATTGATTGCTCGCTTAATACTCGAGCAAATCTTAAT
ATGAATCAAATAGTTGTGTCATGTTGGCATATGAATGAAGAAACCAGCCT
TCAACATAAGTTTGTTGTGTTTTTTTGGACGCAGTCATCAGCTATCTTTT
GATTAACTTCCTCTGGAATTAAATTGGATCCTGTCTTTGTTATCATTTCC
AGTCAAATACATCCATTCGGGTTCATGTTGAATGTACTCCTGACTGTATT
ATATTTAACATAACATAATAACGCAGTAGTGATTTGCAAACACCGTAGTA
TAATATATATAACATATTATATAATTCATTTAAACACGAATACATCCAGT
CGGGTTCATATTGAATATATGGAAGCTTTTAGCCTGTAAACCATAAAACC
CGTGTGATGCGCGAACACAGGGGAGACCCTAGCGTAACAGCAAAgggcta
atgaaaggcccataTGCTAT Run BLAST on NCBI transcript from alignment at sc0000395:99291..100510 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021852 ID=TCONS_00021852|Name=TCONS_00021852|organism=Clytia hemisphaerica|type=transcript|length=1220bp|location=Sequence derived from alignment at sc0000395:99291..100510 (Clytia hemisphaerica)
ATAGCAtatgggcctttcattagcccTTTGCTGTTACGCTAGGGTCTCCC
CTGTGTTCGCGCATCACACGGGTTTTATGGTTTACAGGCTAAAAGCTTCC
ATATATTCAATATGAACCCGACTGGATGTATTCGTGTTTAAATGAATTAT
ATAATATGTTATATATATTATACTACGGTGTTTGCAAATCACTACTGCGT
TATTATGTTATGTTAAATATAATACAGTCAGGAGTACATTCAACATGAAC
CCGAATGGATGTATTTGACTGGAAATGATAACAAAGACAGGATCCAATTT
AATTCCAGAGGAAGTTAATCAAAAGATAGCTGATGACTGCGTCCAAAAAA
ACACAACAAACTTATGTTGAAGGCTGGTTTCTTCATTCATATGCCAACAT
GACACAACTATTTGATTCATATTAAGATTTGCTCGAGTATTAAGCGAGCA
ATCAATAACTAGCAGCTACCGacaacttttttttacaagaaaaacaaGAC
AAATCAATATGTGAATATGAAATGGTTGGTGActggaaataaaattttca
aaaaatcaatggTGTTGAATCATGCTGGCCGATGATTATGATCTCCATGC
AAGTTTTCACTGCCATTGTTTACATTGACGTTTATTCAACAACATTGGTT
TGGTCATTGTGCGCCATCCATGCCCCATGCCAGACGGCATGAAACACCAT
GAAACTTATTGGACTTTTATACGATACAGTCTGTACAGTCTGATTATCAT
ATCAGCTTTTTATCACAGATGTATATATGTATTGTATGTAAATACTTATT
GATATACAGTTAAACAAAATTGATGAAtggcaaaaacaaaatagagcaAA
CTTtggatagaccttttcgcctttgcgtccgccatattgaattgtatgca
aaaattatggttgccgaattgccgtggtgaaattcccttagaaagtatgc
aaaacatatgcaaaaagaaagtattaaataaaaacttacatgcataattg
gcattatattaaagtgtaatcttgtagaaggaagattaaatttgcttctc
ttgaaaactaaaaacaattatattcactaatctcttagaacaagcacttc
aaaagaccataacattggacagaatctcaaactgaaaaatcacccgcgaa
ggtaaaaaacaatccttattcggctgacggcaaattattctcctgggaat
agagccgccaaatgatcaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021852-exon-sc0000395-1491911889:99291..100510 | TCONS_00021852-exon-sc0000395-1491911889:99291..100510 | Clytia hemisphaerica | exon |
| TCONS_00021852-exon-sc0000395-1510915933:99291..100510 | TCONS_00021852-exon-sc0000395-1510915933:99291..100510 | Clytia hemisphaerica | exon |
| TCONS_00021852-exon-sc0000395-1575043694:99291..100510 | TCONS_00021852-exon-sc0000395-1575043694:99291..100510 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000395 | supercontig | sc0000395:99291..100510 . |
Blast
The following BLAST results are available for this feature:
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