TCONS_00021894 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021894
Unique NameTCONS_00021894
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1829

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021894 ID=TCONS_00021894|Name=TCONS_00021894|organism=Clytia hemisphaerica|type=transcript|length=1829bp
ctggaaggtttagattatggaattttgcaagaccacGTCAAGGATTTTAC
AGCAGGAGGTCTGGTAGCCCAGCTCTCGTTTTCGGGTATTGTAACATGAA
GGTTTATGAATCCAAGAAGGCACAGGAAATTATTCCAAACGAGAATGAAC
AGGCTATATTACAAGACTGGTATCGCATGCGAAGAAATAACTTAATCATC
TTTTGCATATGCAAATGTCTTTACAGCTTCGAATGTTCCGCCATTAGTAT
ATCAGCTCTTTACTATTTCCAAAATGTCATCAAAGTTGGGAACCCAAATT
TATACTACTCCCTGGCAGTTGgcgcactttcgttttcgtccATATTCTCG
TCGGCGCTGGTAGGCCGAATGGTTGATCGATACCGAAATTTGCGCCAGAC
GTCCCTCTCTTTGAGCTTGTTTAATTTTGCTGGGAATTTGCTGTACGTGT
TACCGTTTGCGCCATGGCTACCCATCATTGGCAGGTTCTTGTGCGGGATT
TCAGATGGTGTGAGACCAGCATACCAAGGGGAATTAACAAGAACATATTC
ATCAAAAGAACTGACAAAGTATGGAACATTCTTACAGATGCTTGAAATTA
TTGCACATGCAGTCGCTCCTGTTTCTCCTATGATCTTCAAGTGGGtcgat
ttcaaacttttcgGTTTGAAATTCAACCAATACAATTTCGTTGGTGTTTT
CTTAATGTTTACAACTATGATCTACCTGACCATGGCGTATTTCATGTTGT
CAGACCTTACCAAAGAGAAAGGATACCAAATCTTTTTAATTGAAGAGGAA
TTGGGGGAAAATCACACAAGCACCGGTGCAAATCACGaacatcaaaaact
tttatcTATCAAAAACATCCTCACAACTTTTGATATCATGTTGATTCTAA
CCACAATTCTAATACTGAATTATATCTATACTCAAGCCGAACTCGTCATC
AACATCATCGCTGTTGATAAATTCCAATGGACCGTTGAACATTTGGGTAT
TTTTTCAATCTCAACGATTATCATTGCGCTCTCGGTAATGcatgttttga
aaagattgCATTCTGGCGTTGATATCTATTACATTATCGTGTGTTTCGTC
ACTGGAAATGGACTGAGTATGGCTATTCTTGCATTCTTATCTAATTACGA
GATCCGAAATGCAGTGTTTCAATCCTTTCTAGTTTTATCAATAATGTCTT
TGAACATAATTGCAGGATACAGTGCCTCAATTTTCACTACCTTTGCAATC
GCCTTGGTTGTTCCTGTCCATTCAAGATGTTTCGTTGTTGGATTAAGACA
AGTTTCCATGAAACTTGCTTTATGTTTGGGTTATTTTAGTACAACACTTC
TGTATAATGTTAGTATTATATCTTACCCTATTATGTCATTATGCTGTTTT
GCGTTATCTTTTATATATTTATGTAATAGCTTCagatttataagaaaata
ttgTCGAAGACTGTAAAGTAGGGCAAAAAATCTCACGAATTTCCTCATGC
CAATGTACTTGTTATACATTCATGGACAGCTTATCCATTTGGAAATCGAA
ATTGTGATGTTGCTAATTTTTTTCATCACTGGTGCATTTCACCAATTTTA
ATTGTAAATTATAAACTTGATTTGATTAATTTGCTTCAATAGATACCTTT
TGGGTAAAAGCCACCTAGGTTCTCATTGTCCCCAGATATTATATATATTC
AATACTATTTATTAAGttatttataattgaaaatcgtttttttagtattt
tcctAATTCGACATTGCCTCGCGACAGTGCCTAGTCTTACACTTTTATAC
GCTAGTTTTGACCCAAGTCCTTTATTTCT
Run BLAST on NCBI

protein sequence of TCONS_00021894-protein

>TCONS_00021894-protein ID=TCONS_00021894-protein|Name=TCONS_00021894-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
GRFRLWNFARPRQGFYSRRSGSPALVFGYCNMKVYESKKAQEIIPNENEQ
AILQDWYRMRRNNLIIFCICKCLYSFECSAISISALYYFQNVIKVGNPNL
YYSLAVGALSFSSIFSSALVGRMVDRYRNLRQTSLSLSLFNFAGNLLYVL
PFAPWLPIIGRFLCGISDGVRPAYQGELTRTYSSKELTKYGTFLQMLEII
AHAVAPVSPMIFKWVDFKLFGLKFNQYNFVGVFLMFTTMIYLTMAYFMLS
DLTKEKGYQIFLIEEELGENHTSTGANHEHQKLLSIKNILTTFDIMLILT
TILILNYIYTQAELVINIIAVDKFQWTVEHLGIFSISTIIIALSVMHVLK
RLHSGVDIYYIIVCFVTGNGLSMAILAFLSNYEIRNAVFQSFLVLSIMSL
NIIAGYSASIFTTFAIALVVPVHSRCFVVGLRQVSMKLALCLGYFSTTLL
YNVSIISYPIMSLCCFALSFIYLCNSFRFIRKYCRRL
Run BLAST on NCBI

transcript from alignment at sc0000396:68246..75053-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021894 ID=TCONS_00021894|Name=TCONS_00021894|organism=Clytia hemisphaerica|type=transcript|length=6808bp|location=Sequence derived from alignment at sc0000396:68246..75053- (Clytia hemisphaerica)
CTGGAAGGTTTAGATTATGGAATTTTGCAAGACCACGTCAAGGATTTTAC AGCAGGAGGTCTGGTAGCCCAGCTCTCGTTTTCGGGGTAAGGGTAGTTGA ACCCGACTAGGGATGCAGCGCATCAAAGGCCGACTATTATTCCTCTCCGA TGGGAAATTGTCCCGCTCCTTTTAGAGATTTAGCGTGGGCGGCCGCCAAT CCGCCATCAAATATCAGATAATATTGTACCGTACAAATTCAAGCCGCATT CAATGAAGGGGTCTGGTAAGCGAGAGATCATATTTTGTACAATTTCATGG TTAGAAATATTTTCTTTTCGCTTGCATTACTAGACTGGCACACCAGTCGG GCTGGAACGGTATCACGCAGGAAAAATGAGCGTAGGAGTTAGATAAGCGC AAGAAGAAATTTTGTCGGCGACAACGTCTTTTTTCGTGTTTGGTTTATTG CAAAACCCCGCACTCTCCAGACTCCATCTTTTTCGGTTTGATTTCGTGCC TTAGCATCTTCTGCCGCCTCTTTGTACTTTTTTCTTTGAACTGGAGTTAG ATCTTCGCAAATGCTCATCCCCTTATAGGCATCGATTCCTTTAAATTTTG TAATACCTTTTTGACACCGGACACTTGAATCAATTCAAAGTTTTATAGTT TTTATCGCCTAATTTGTCATAATTGCTTTTAATCATTTTTATCACCTAAT TTGTCATAATTGCTTTTAACCTTTTTACGATTTTTTTACGATTTTTTCCA CACTTCAAATCTGTACATAAGACGGTTTTTTAAAAAAATGTTTTTACACA TCTGATGATTGCGATAAGCATGAAACTTTAAGTAATGTATTTTTAACCTT GTGAATTTTCGAAAGATATAATCTATGATTCGCTCTACGANAACCTTGTA AATTTTCGAAAGATATAATCTATAATACCTTTTTGAATGTTGTAAATTGA AATTCGATTTGAATTTTTAAAAACTATACTTGTGGTCATAGTGCATAGAA GACACCGGAACGTAAAGAAATGAATAAAATTTCAATTTCAATTCACTTTT GTTATTACGATTTAATATAATTTAATTATTGACAAATAGAATAACCAGAA GCATTTTTGTTTTTTATTAAAAACTATAAATTCGACCTCACTCACAAGAG GTCATCATCAGAGTAAAAAATCTAATACAGAATGATTTTTTACTCTGATG ATGACCTCTTGCATGCATGCATGTTCCGTTCAATCAATTTTTGACGAAAT TTCTGGTCAAAAAATTGAATTTCGATGGTAATTTTCAATTTTCAAATTTC GAGTTAAAAAAATGAAAATTGAATTTTAATTCAAAGTTTCAATGTTAGTT TTTTTATTGCTAGAAATAAACTGAGATTTCCAGTATCGTCTTTGATTTTC TAATATAAACTTCTTGCATTAAAAATTGAAAATAATATTTTCAAATAATG AAAATTCTGCGTGAAAAATTGAATTTGACAAAACCAAATCAATTTGTAAA AAAGACGTCTCGGATAAAAAAATTGAAAGTTGAAAATGATTTACAATCAG TTACAAAGAAGATGAAGGAAACAATAGTTTTATTCAGTCGCTTCTTTGTT AGTCTAATTTATCTCTACCTCGAGGAGTTAGGTCATTTGAAACTTTCTGA TTACACAGTACATCAAAGGTCCCTTAGTTGACAGGTAGCTGTGCCACTGA GGTTGAAGAAATTTCATTCCTAACACAGTCCTGTGTATCCTAAAGACTTA ATCAAGCACTTTCTAAATAATTTTTTTATAAGAACCAGTAAGTATACTTT GGCTCAGGCCGGGATGTTCTTAATTTTTTGAATTTTTCAGGCTTAAATGT TCTTACGATGTTTTTTACTTGAGAACTTAAAATAGATTTGAAATCAGTAT TTTTTCAAAAATCTGAGGCTCAGATTGTTCTTAATTTGTTCTTAGGTTTT GGCCTAAATTTCAGCCTCGCTTTCTTGTAAAATTGTTCTTATAAAAAAGG GCGTTGCTCAATAAAAAAGGCACACTGCAGGACTGTGTTTGCAGACAAAG ACCAAAGAGTATCCGAAGAGTATATATTACGTAAAGGAAATTTTTCCACG TGAATTTTATGTCATAGTGTATTTACCCAGAAGGAAATTAAACTGCCAAA GACCTGGGAACTAGACAGCAACAAACAATAAAACATTCTACATTTTTGTT CTTTTTTGGTACCGATGAAACACTACTTGTTTTGAAAATCTGTTTTCATG GAAAAGCAAGCGTGATGAAAAATTGGTTTTGTTTTGACAATTCTTCAATT TTTCACGACACATTTTCAGTATTTGAAAATATTATTTTCAATTTTCGATG CAAGAAGTTTATATTAGAAAATCAAAGATGATATTGGAAATTTCAGTTCA TTTCTGGTAATAAACAAAACAAAAATTGAAATTTGCAATCAAAATTTAAT TTTCAATTTTTTAACTCGAAAATTTAAAAATTGAAAATTGAATATTGCCA TCGAAATTCAATTTTTTGACCAAAAATGTCGTCAAAAATTGAATGAACGA AACATGCACACACAATCCGTGACCCGAAAGTATCATTTGATTTTTGATTT AAAATCAAATCGAATTTCAGAAGAAAATTGATTTTCAATTATCCCTCACC GATTAAAAATCAAATTTCAAACCAATTCTTGATTTTTGTTTTTTAAATCA AATATTGCATTTATCTCGATTTATCTGAGATGAGAGCCTGTTCTTGGGAA GCACACTTGTCCAAATGGGACTCGGTTATCTTTCCATGTCACTGACACAC ATATGGTACATGAAATTTTGTCCGACTAAAAGTACGTAGGCAAACATACT GTAATGATTTTCGAAAATCACTTTCAATTTCTGATTTTTAATTTTCGATT TTCTAATTTTCTAAGAAAGACACGCATTCTATTCGAACATTTTTATGAGA ATAATAAGGCTAAAAAATGCCAGTAAACAAAAATTGATTTAGCCTGTATT TGAGTTTTCATCGTTGAAACAAGGTATAAAGGTTGAAAGATTGTAAGTCT TAGAAATTAAGAACAGTTAAGGATGTATCTTCATTAATAATTGTATTAAA AAGTACCATGTCCATCCTTATGAATTTGAGGGTGTTCCTTGGGCTTGGAT TTTCTGGTGATTCCTGATATGTTCCTGGACCTCTGCGCAAAATATCTTCT CTACACCATTTTTTTTGTCCGGGTAGTTATGCAATTCTACCTGACTATTT CCTTCGTTATTACCATTGTTACACGTGGTAGGTTTGTGTACCTTTTAGAA AGAGGAACGTAACGAGGAGAGGATCTTTTAAATTTGGAAACGAAATTGTG TAAGCGATTTTCCTTAAATGTATTCCTAATAATCATAATTTGTTGCTTTA GTTAAAGAAAAATAATAAGTACTCTGGTAGTGTTACAAAAGAAACACAAC CAAAACTAAAAGGTCCAATCATGTCCAATTCAGCCACGGTAAAAACGTGT AATTTCAAAAAAATCTGAAAGGTTTTCTACACTTTTTTTTATAAGAACCA GTAAAACCTTTCTGAGGCTCGGCTGTTCTTATTTTTTTGACAGTTTGAGC ATGAAATTTTTCTTATTCTGTTCTTATTTTTAGGCTGTATTTGAGGTATT TTAGACGTTATACCCAATTTTTACCACTTTTGCCCCTAAATTGCTTGAAA TTTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTATAAAATTGTTCTTATAAA AAAAAGTGTACTCATTTTAGTTTTTTTACAATCGCACTTTTTGAAACACC CGGTATCTATGCGCAAAGTAAGGTTGAAATTCATTATTGTACGCTTGCTT CAGAGTAACAGTTAGTCGGACAAAATTTCATGTACCATGTTTGTGTGTCA GTGACATGGAAAGATAACCGAGTCCCATTTGGACAAGTGTGCTTCCCAAG AACAAGGCTCTCATCTCAGATAAGTGCAATATTTGATTTAAAAATCAAAA ATCAAGAATTGGTTTGAAATTTGATTTTTAATTGGTGAGGGATAATTGAA AATCAATTTTCTTTTGAAATTCGATTTGATTTTAAATCAAAAATCAAATG ATACTTTCGGGTCACGGATTGAAATCAAACATTAAAAAGAAATCAAAAAG AAATCAAAAATCAAAAAGAAATCAAAAAGAAATCAGAAATCAAAAAGAAA TCAAAAAGAAATCAAAATGAAAATCAAAAAAAANACACACGCCTCTTGTG AGTGAGGTCGAATATATAGTTTTTAATAAAAAACAAAAATGCTTCTGGTT ATTCTATTTTTCATTAAGCTGTTAGCCCAACGAAACACATTTCAAAATCC AATCATTAAACTAATTCGTCCGGCAAGTAAATAATAAAGAAAAAGTTGCT TGATAATTAGTTTTGCAAACGAAATCGCAATTTTCTTCTTTTTCAATCAA TAGTATTGTAACATGAAGGTTTATGAATCCAAGAAGGCACAGGAAATTAT TCCAAACGAGAATGAACAGGCTATATTACAAGACTGGTATCGCATGCGAA GAAATAACTTAATCATCTTTTGCATATGCAAATGTCTTTACAGCTTCGAA TGTTCCGCCATTAGTATATCAGCTCTTTACTATTTCCAAAATGTCATCAA AGTTGGGAACCCAAATTTATACTACTCCCTGGCAGTTGGCGCACTTTCGT TTTCGTCCATATTCTCGTCGGCGCTGGTAGGCCGAATGGTTGATCGATAC CGAAATTTGCGCCAGACGTCCCTCTCTTTGAGCTTGTTTAATTTTGCTGG GAATTTGCTGTACGTGTTACCGTTTGCGCCATGGCTACCCATCATTGGCA GGTTCTTGTGCGGGATTTCAGATGGTGTGAGACCAGCATACCAAGGTAAC TCTAATTTGAGATTTTCACTTCAGAGCTTTTGTTACATGAAAAGAAAAGA CACAGTGCTAGATACTCATCATACGGCAACTAATTTTGAGGGAACAGGAA ATTTTTCTTCAGACATTTTCAAACAACCCTCCCAAGTTACAATTACAAAC TTCCAAGAAATCTACAAAAATTAGTAAGACACCCTACCAACAGGAAAACA TCAGCTATAAAATCGTTCCCAATCTGGGAATCTGCTAAAAAGCCAAATCT CTGTACTTATGAAATAATTTCAAAATCTATTAAAAAAGATTTTATCCCAG ATTCATTCTGACCTGATCACCTCGCTGATACAGGGAGAGGTGGAGAAAGC AACGTGTTTCCATATAACAAATATAAATATAAGAATTTCTATTCCAATTA TTTTCAGGGGAATTAACAAGAACATATTCATCAAAAGAACTGACAAAGTA TGGAACATTCTTACAGATGCTTGAAATTATTGCACATGCAGTCGCTCCTG TTTCTCCTATGATCTTCAAGTGGGTCGATTTCAAACTTTTCGGTTTGAAA TTCAACCAATACAATTTCGTTGGTGTTTTCTTAATGTTTACAACTATGAT CTACCTGACCATGGCGTATTTCATGTTGTCAGACCTTACCAAAGAGAAAG GATACCAAATCTTTTTAATTGAAGAGGAATTGGGGGAAAATCACACAAGC ACCGGTGCAAATCACGAACATCAAAAACTTTTATCTATCAAAAACATCCT CACAACTTTTGATATCATGTTGATTCTAACCACAATTCTAATACTGAATT ATATCTATACTCAAGCCGAACTCGTCATCAACATCATCGCTGTTGATAAA TTCCAATGGACCGTTGAACATTTGGGTATTTTTTCAATCTCAACGATTAT CATTGCGCTCTCGGTAATGCATGTTTTGAAAAGATTGCATTCTGGCGTTG ATATCTATTACATTATCGTGTGTTTCGTCACTGGAAATGGACTGAGTATG GCTATTCTTGCATTCTTATCTAATTACGAGATCCGAAATGCAGTGTTTCA ATCCTTTCTAGTTTTATCAATAATGTCTTTGAACATAATTGCAGGATACA GTGCCTCAATTTTCACTACCTTTGCAATCGCCTTGGTTGTTCCTGTCCAT TCAAGATGTTTCGTTGTTGGATTAAGACAAGTTTCCATGAAACTTGCTTT ATGTTTGGGTTATTTTAGTACAACACTTCTGTATAATGTTAGTATTATAT CTTACCCTATTATGTCATTATGCTGTTTTGCGTTATCTTTTATATATTTA TGTAATAGCTTCAGATTTATAAGAAAATATTGTCGAAGACTGTAAAGTAG GGCAAAAAATCTCACGAATTTCCTCATGCCAATGTACTTGTTATACATTC ATGGACAGCTTATCCATTTGGAAATCGAAATTGTGATGTTGCTAATTTTT TTCATCACTGGTGCATTTCACCAATTTTAATTGTAAATTATAAACTTGAT TTGATTAATTTGCTTCAATAGATACCTTTTGGGTAAAAGCCACCTAGGTT CTCATTGTCCCCAGATATTATATATATTCAATACTATTTATTAAGTTATT TATAATTGAAAATCGTTTTTTTAGTATTTTCCTAATTCGACATTGCCTCG CGACAGTGCCTAGTCTTACACTTTTATACGCTAGTTTTGACCCAAGTCCT TTATTTCT

Coding sequence (CDS) from alignment at sc0000396:68246..75053-

>TCONS_00021894 ID=TCONS_00021894|Name=TCONS_00021894|organism=Clytia hemisphaerica|type=CDS|length=4392bp|location=Sequence derived from alignment at sc0000396:68246..75053- (Clytia hemisphaerica)
GGGAATTAACAAGAACATATTCATCAAAAGAACTGACAAAGTATGGAACA
TTCTTACAGATGCTTGAAATTATTGCACATGCAGTCGCTCCTGTTTCTCC
TATGATCTTCAAGTGGGTCGATTTCAAACTTTTCGGTTTGAAATTCAACC
AATACAATTTCGTTGGTGTTTTCTTAATGTTTACAACTATGATCTACCTG
ACCATGGCGTATTTCATGTTGTCAGACCTTACCAAAGAGAAAGGATACCA
AATCTTTTTAATTGAAGAGGAATTGGGGGAAAATCACACAAGCACCGGTG
CAAATCACGAACATCAAAAACTTTTATCTATCAAAAACATCCTCACAACT
TTTGATATCATGTTGATTCTAACCACAATTCTAATACTGAATTATATCTA
TACTCAAGCCGAACTCGTCATCAACATCATCGCTGTTGATAAATTCCAAT
GGACCGTTGAACATTTGGGTATTTTTTCAATCTCAACGATTATCATTGCG
CTCTCGGTAATGCATGTTTTGAAAAGATTGCATTCTGGCGTTGATATCTA
TTACATTATCGTGTGTTTCGTCACTGGAAATGGACTGAGTATGGCTATTC
TTGCATTCTTATCTAATTACGAGATCCGAAATGCAGTGTTTCAATCCTTT
CTAGTTTTATCAATAATGTCTTTGAACATAATTGCAGGATACAGTGCCTC
AATTTTCACTACCTTTGCAATCGCCTTGGTTGTTCCTGTCCATTCAAGAT
GTTTCGTTGTTGGATTAAGACAAGTTTCCATGAAACTTGCTTTATGTTTG
GGTTATTTTAGTACAACACTTCTGTATAATGTTAGTATTATATCTTACCC
TATTATGTCATTATGCTGTTTTGCGTTATCTTTTATATATTTATGTAATA
GCTTCAGATTTATAAGAAAATATTGTCGAAGACTGTAATATTGTAACATG
AAGGTTTATGAATCCAAGAAGGCACAGGAAATTATTCCAAACGAGAATGA
ACAGGCTATATTACAAGACTGGTATCGCATGCGAAGAAATAACTTAATCA
TCTTTTGCATATGCAAATGTCTTTACAGCTTCGAATGTTCCGCCATTAGT
ATATCAGCTCTTTACTATTTCCAAAATGTCATCAAAGTTGGGAACCCAAA
TTTATACTACTCCCTGGCAGTTGGCGCACTTTCGTTTTCGTCCATATTCT
CGTCGGCGCTGGTAGGCCGAATGGTTGATCGATACCGAAATTTGCGCCAG
ACGTCCCTCTCTTTGAGCTTGTTTAATTTTGCTGGGAATTTGCTGTACGT
GTTACCGTTTGCGCCATGGCTACCCATCATTGGCAGGTTCTTGTGCGGGA
TTTCAGATGGTGTGAGACCAGCATACCAAGGGAAGGTTTAGATTATGGAA
TTTTGCAAGACCACGTCAAGGATTTTACAGCAGGAGGTCTGGTAGCCCAG
CTCTCGTTTTCGGGGGGAATTAACAAGAACATATTCATCAAAAGAACTGA
CAAAGTATGGAACATTCTTACAGATGCTTGAAATTATTGCACATGCAGTC
GCTCCTGTTTCTCCTATGATCTTCAAGTGGGTCGATTTCAAACTTTTCGG
TTTGAAATTCAACCAATACAATTTCGTTGGTGTTTTCTTAATGTTTACAA
CTATGATCTACCTGACCATGGCGTATTTCATGTTGTCAGACCTTACCAAA
GAGAAAGGATACCAAATCTTTTTAATTGAAGAGGAATTGGGGGAAAATCA
CACAAGCACCGGTGCAAATCACGAACATCAAAAACTTTTATCTATCAAAA
ACATCCTCACAACTTTTGATATCATGTTGATTCTAACCACAATTCTAATA
CTGAATTATATCTATACTCAAGCCGAACTCGTCATCAACATCATCGCTGT
TGATAAATTCCAATGGACCGTTGAACATTTGGGTATTTTTTCAATCTCAA
CGATTATCATTGCGCTCTCGGTAATGCATGTTTTGAAAAGATTGCATTCT
GGCGTTGATATCTATTACATTATCGTGTGTTTCGTCACTGGAAATGGACT
GAGTATGGCTATTCTTGCATTCTTATCTAATTACGAGATCCGAAATGCAG
TGTTTCAATCCTTTCTAGTTTTATCAATAATGTCTTTGAACATAATTGCA
GGATACAGTGCCTCAATTTTCACTACCTTTGCAATCGCCTTGGTTGTTCC
TGTCCATTCAAGATGTTTCGTTGTTGGATTAAGACAAGTTTCCATGAAAC
TTGCTTTATGTTTGGGTTATTTTAGTACAACACTTCTGTATAATGTTAGT
ATTATATCTTACCCTATTATGTCATTATGCTGTTTTGCGTTATCTTTTAT
ATATTTATGTAATAGCTTCAGATTTATAAGAAAATATTGTCGAAGACTGT
AATATTGTAACATGAAGGTTTATGAATCCAAGAAGGCACAGGAAATTATT
CCAAACGAGAATGAACAGGCTATATTACAAGACTGGTATCGCATGCGAAG
AAATAACTTAATCATCTTTTGCATATGCAAATGTCTTTACAGCTTCGAAT
GTTCCGCCATTAGTATATCAGCTCTTTACTATTTCCAAAATGTCATCAAA
GTTGGGAACCCAAATTTATACTACTCCCTGGCAGTTGGCGCACTTTCGTT
TTCGTCCATATTCTCGTCGGCGCTGGTAGGCCGAATGGTTGATCGATACC
GAAATTTGCGCCAGACGTCCCTCTCTTTGAGCTTGTTTAATTTTGCTGGG
AATTTGCTGTACGTGTTACCGTTTGCGCCATGGCTACCCATCATTGGCAG
GTTCTTGTGCGGGATTTCAGATGGTGTGAGACCAGCATACCAAGGGAAGG
TTTAGATTATGGAATTTTGCAAGACCACGTCAAGGATTTTACAGCAGGAG
GTCTGGTAGCCCAGCTCTCGTTTTCGGGGGGAATTAACAAGAACATATTC
ATCAAAAGAACTGACAAAGTATGGAACATTCTTACAGATGCTTGAAATTA
TTGCACATGCAGTCGCTCCTGTTTCTCCTATGATCTTCAAGTGGGTCGAT
TTCAAACTTTTCGGTTTGAAATTCAACCAATACAATTTCGTTGGTGTTTT
CTTAATGTTTACAACTATGATCTACCTGACCATGGCGTATTTCATGTTGT
CAGACCTTACCAAAGAGAAAGGATACCAAATCTTTTTAATTGAAGAGGAA
TTGGGGGAAAATCACACAAGCACCGGTGCAAATCACGAACATCAAAAACT
TTTATCTATCAAAAACATCCTCACAACTTTTGATATCATGTTGATTCTAA
CCACAATTCTAATACTGAATTATATCTATACTCAAGCCGAACTCGTCATC
AACATCATCGCTGTTGATAAATTCCAATGGACCGTTGAACATTTGGGTAT
TTTTTCAATCTCAACGATTATCATTGCGCTCTCGGTAATGCATGTTTTGA
AAAGATTGCATTCTGGCGTTGATATCTATTACATTATCGTGTGTTTCGTC
ACTGGAAATGGACTGAGTATGGCTATTCTTGCATTCTTATCTAATTACGA
GATCCGAAATGCAGTGTTTCAATCCTTTCTAGTTTTATCAATAATGTCTT
TGAACATAATTGCAGGATACAGTGCCTCAATTTTCACTACCTTTGCAATC
GCCTTGGTTGTTCCTGTCCATTCAAGATGTTTCGTTGTTGGATTAAGACA
AGTTTCCATGAAACTTGCTTTATGTTTGGGTTATTTTAGTACAACACTTC
TGTATAATGTTAGTATTATATCTTACCCTATTATGTCATTATGCTGTTTT
GCGTTATCTTTTATATATTTATGTAATAGCTTCAGATTTATAAGAAAATA
TTGTCGAAGACTGTAATATTGTAACATGAAGGTTTATGAATCCAAGAAGG
CACAGGAAATTATTCCAAACGAGAATGAACAGGCTATATTACAAGACTGG
TATCGCATGCGAAGAAATAACTTAATCATCTTTTGCATATGCAAATGTCT
TTACAGCTTCGAATGTTCCGCCATTAGTATATCAGCTCTTTACTATTTCC
AAAATGTCATCAAAGTTGGGAACCCAAATTTATACTACTCCCTGGCAGTT
GGCGCACTTTCGTTTTCGTCCATATTCTCGTCGGCGCTGGTAGGCCGAAT
GGTTGATCGATACCGAAATTTGCGCCAGACGTCCCTCTCTTTGAGCTTGT
TTAATTTTGCTGGGAATTTGCTGTACGTGTTACCGTTTGCGCCATGGCTA
CCCATCATTGGCAGGTTCTTGTGCGGGATTTCAGATGGTGTGAGACCAGC
ATACCAAGGGAAGGTTTAGATTATGGAATTTTGCAAGACCACGTCAAGGA
TTTTACAGCAGGAGGTCTGGTAGCCCAGCTCTCGTTTTCGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012284XLOC_012284Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021894-proteinTCONS_00021894-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021894-exon-sc0000396-1575043694:74968..75053TCONS_00021894-exon-sc0000396-1575043694:74968..75053Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1575043694:69959..70400TCONS_00021894-exon-sc0000396-1575043694:69959..70400Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1575043694:68246..69546TCONS_00021894-exon-sc0000396-1575043694:68246..69546Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1510915933:74968..75053TCONS_00021894-exon-sc0000396-1510915933:74968..75053Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1510915933:69959..70400TCONS_00021894-exon-sc0000396-1510915933:69959..70400Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1510915933:68246..69546TCONS_00021894-exon-sc0000396-1510915933:68246..69546Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1491911889:74968..75053TCONS_00021894-exon-sc0000396-1491911889:74968..75053Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1491911889:69959..70400TCONS_00021894-exon-sc0000396-1491911889:69959..70400Clytia hemisphaericaexon
TCONS_00021894-exon-sc0000396-1491911889:68246..69546TCONS_00021894-exon-sc0000396-1491911889:68246..69546Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000396supercontigsc0000396:68246..75053 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.43333 4.46406 0.647899 0.921847 0 0.140025 0 0.688713 1.44565 1.37154 0.579737 0.761314 0.568031 0 0.324926 0 0 0 0 0 1.10651 0 1.3122 1.78947 1.03456 0.536712 0 0 0 0.763605
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021894 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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