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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021916 ID=TCONS_00021916|Name=TCONS_00021916|organism=Clytia hemisphaerica|type=transcript|length=2063bp
GTTAGGATGACCCATTTGTTTTTCTTACGTTGATACCCACCTTTACGACA
ATACGACTTAGCGCATTCCAAATGCGAGTGGGTATTCTATTCTAAAAATA
CCATTAgcgattttttttatgaaaaagagCTCACTTCACGACTATCTCGT
TTCATCATCTGGATTGCATGtttgtataatttttcaaatgcgTATGGACT
TTATGTGACGAAAATTTGCATTTAATTTGTTTGACATTGGATTCGTGACT
CACagtcaatattttttgacttttttgagtTCGAAGAAAGATATCTTATG
TATCTTAGTGAGAGAGGAGAGTGGATGATTCAAGAATACATTTGCTAGAG
ACATCGAGAAGCATAGTCGATCAGAAAATTTGTATGTTGTTGTGGTGTTT
TAGATTCTTGGTTATTTACAACTTTAGTGAACACAAGATAAAATACTAAT
TGAGAAATAATGGTTGCGGCTGTTCGAAAAAGTGCAATTGTTCCACCACC
CCAAACCGGgCAAGGGGAGGGAATGACAGGCCCATATTTCCAACACAACA
TATACAATATGAGCAGCGAACCACATTTCCGGTCTGAAAGTCCAATTCCT
CGTAGTCCACGATTCGGTAGTTTACGACGACGAAAACGCATCGACCGAGA
ATATTTTGATGATACGAGTGAAGGCTCGGATGGGAGGACGAGTTCCGACG
AATATGAATCTTCATCAAATCAAACATCGAAAAAAATGGACGATAATAAC
AACACAAATCAAAAGAATCGAAAAAACAGTCATTTTGCTTTTAGTAATGT
TaagaaaaagattacgtcaaCTTTTCAGCGTCGGCATTCTGTGTCAATGC
ACCCTCCCTCAGCGACAGTTCAAGGTAAACAATTACCGATTCGACGATCG
TCAACGACCGGAAATCAATCACCAAGACTTTTACGTCAATCTTCGTTTGA
TGAGAGCCATACCGCCGTACATAAACGTAAAACGTCGCTACGACGACAAG
TTACCATGGCAGCTGTACGTTTACACGAACAAAGTCAAGTCAGCGGTAGT
AACCCAATGTTAGAcagaattttacaaaaaagcCAATTTCAACTTGAATC
AAGTTCCTCTACACCGGATATTAAATCACATTTATCTTTGAAAAAGAcac
atttaaaaacatttaaaattcaTATACTTGGAAGCAAGTCCGTCGGAAAA
ACAGCTCTGACGGTGCGTTTTCTAACGGGAAGATACATTCACGAATATAA
ATCAGCAGCAGAAGAAACATACACACGTGTGATGAAatatgaagatgaag
aagtcaATGTTAAAATACTCATCAATGATATTGAATCTATGGAAAATGAC
ATTGAACTTGGTCAAAATTCTGGCATCATGATTTTATACTCCATCGTTGA
CCGCACCTCATATGATTATgcgaaatttgttttaaattatTTATCAGAGA
ACAATATAACTGGTTACTACCCTGTCATGCTAATGGGTACTAAACGAGAT
CTATCACGCATGCGTCAGGTGGACCGCAAGGAATCATTCAAGGTTGCTAC
ACAATACAATTGTACACCTTTTGACGTTTCGTCGGCAAGTAATCGACGTG
TGACGGAAAGTTTTCATGCAATGTTCCGACAAATTGAAATTCGAAATTTA
TTGAATCAAAATGAAGGTATTGACGCACCTACCATCGTTAATCCACCTAT
TGTTGCAAGGTCAGGTAAACTCCGGTATGGAACTGCATAGGAAAATTCAA
TCACAAAATAAGAGTCGAATGAATTTTAACATAACACGGATTTTTAAATG
AAGCCGCTGGATTAGAGACAAGATAAGAGAGAATAACAAATTTATTGAAT
TATTAATATTATATTGTAACTCTCTCCTCAAAATCGGCTGTCACAATAAT
AATTCgatatcatttttattttaaacttgTCGATATGTATATATAAGATT
TGTAATttcatttcgaaaaataaagcTGTGCTTTCTAATGAAACGAACCA
AAAGAAGTGACATAGAAGTGATAAAAACCCATACTCTAAAACCCCATTGG
GGCTTAGAGAATG Run BLAST on NCBI protein sequence of TCONS_00021916-protein >TCONS_00021916-protein ID=TCONS_00021916-protein|Name=TCONS_00021916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MVAAVRKSAIVPPPQTGQGEGMTGPYFQHNIYNMSSEPHFRSESPIPRSP
RFGSLRRRKRIDREYFDDTSEGSDGRTSSDEYESSSNQTSKKMDDNNNTN
QKNRKNSHFAFSNVKKKITSTFQRRHSVSMHPPSATVQGKQLPIRRSSTT
GNQSPRLLRQSSFDESHTAVHKRKTSLRRQVTMAAVRLHEQSQVSGSNPM
LDRILQKSQFQLESSSSTPDIKSHLSLKKTHLKTFKIHILGSKSVGKTAL
TVRFLTGRYIHEYKSAAEETYTRVMKYEDEEVNVKILINDIESMENDIEL
GQNSGIMILYSIVDRTSYDYAKFVLNYLSENNITGYYPVMLMGTKRDLSR
MRQVDRKESFKVATQYNCTPFDVSSASNRRVTESFHAMFRQIEIRNLLNQ
NEGIDAPTIVNPPIVARSGKLRYGTA Run BLAST on NCBI transcript from alignment at sc0000400:65958..75844+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021916 ID=TCONS_00021916|Name=TCONS_00021916|organism=Clytia hemisphaerica|type=transcript|length=9887bp|location=Sequence derived from alignment at sc0000400:65958..75844+ (Clytia hemisphaerica)
GTTAGGATGACCCATTTGTTTTTCTTACGTTGATACCCACCTTTACGACA
ATACGACTTAGCGCATTCCAAATGCGAGTGGGTATTCTATTCTAAAAATA
CCATTAgcgattttttttatgaaaaagagCTCACTTCACGACTATCTCGT
TTCATCATCTGGATTGCATGtttgtataatttttcaaatgcgTATGGACT
TTATGTGACGAAAATTTGCATTTAATTTGTTTGACATTGGATTCGTGACT
CACagtcaatattttttgacttttttgagtTCGAAGAAAGATATCTTATG
TATCTTAGTGAGAGAGGAGAGTGGATGATTCAAGAATACATTTGCTAGAG
ACATCGAGAAGCATAGTCGATCAGAAAATTTGTATGTTGTTGTGGTGTTT
TAGATTCTTGGTTATTTACAACTTTAGTGAACACAAGATAAAATACTAAT
TGAGAAATAATGGTTGCGGCTGTTCGAAAAAGTGCAATTGTTCCACCACC
CCAAACCGGGTTTGTTTCTATTTTAAGTCTATTTGTATCGAATGAGATTG
GACAACATTTTCTCTTTAACATAGACTCCGGAAAGCCAAAGAAAACCCCA
AATGCCTTGTTTACAGAAGGTCACTGTAGCTCAGTACTACATGAGACAGG
GGTGATAGATGAAGAAATCTCAACATATTCTCCCAGTTCTCCTAGTTCTC
GCTACCcgcacttttttttaaattgttctttaaACCAAATAGATATTATG
TTTGTTGCAACTCCTTGCTTTGgaaattaaatcaaaatcaatttaaaatt
cAAGTTGCGTAATTAACAACATTATGGCCGCCATTCAAAAATTGCGTGTG
TGGCCATaatctttttccttttcttcaaTATGCAGACATACTTTAAACCC
ATAATTGTTTCTGATCGTGACAAGGAATTGgattgaaaagaaaaagcaaT
GAGTTTGCAAATGCCTTCTCAAAATGAATTGACAGGAAAAAATACAGAAA
TGGGGAGAAGAAAACTAATTATAAATAGCCCATTAATTATCATTAATGAT
ACACCGTCAAAACACCCGGTTTTCTATTATAATCATCATTTGATTGACAA
TGCCAATCTTCAGGAAAGAGCTACCTTGTTTGAAAATACTATATATTCTA
TAAAGTTGGTAATTTTGACGATGCTCTTTTTTATACTTGGTCAGTTGAAC
TAAGGATTgctttttgcaacattttgaagattttgacttGTAACTTTTTT
TACCGAGGGGAAAAAGAttgattgaaattttaattACTACATCAGTATGT
GGGTTCTAAAGTAAGGtgatttttagttttattgGAAGTAAAATGTTGAT
GAAGAAAGTCTACTACACCTATAAGAACCAGCAAGCTTTTTATGAaactc
ggctgttcttatttaaCAGCCCTAAGTaagagcctcaaattgttcttttc
ATGGTTTTATTTCTTGTGATAAATTGGAGTGGTCAGAATTTTCGCATTTA
AATTACTTGAAATTCAGCCTTTTGTTGAGTTTGAGCCccaatattcttat
aaaattgttcttataatttttttattttaattaaaaGCACTAAAGACTAA
ATAGTTCCAGAAACTAATATTTCTTGTTCTACATCCGGAAATCAAATTTT
GGAATCTTCAAGACTTTATAAAATATCTTCTCTCCGTGACGTCAAAAGCA
TTCAAGATTTTAGCACTTTAATGCTACAATATTGAAAAATCTCTTCAAAC
TATTCATAAATCTAAAAGCTCGTAAATTTAGTTGCCCTTTCTTTTATCCG
TGTTGCTATTTACACCTCTCAAATACTgttaaaatttgatttcatttttt
tcatgccctttttcTTGTTTGCTTGGTATTAATTTTCATGGAGATTTTAA
AACGATTTATTGCAATGTATACTTTTGAGAGAGAGTTATCTTTCTTAAAT
TTTGTTCtcgaattttgaatttgataacTATTTTCATAATATTGTCTATC
ATTGCTGTGAGTTTTTCAtcatctgtctgtctgtgtctCAAATTTTCTTG
AACGAATGGATCTTTTCAAAGGTATGACAGATCGATAAAAATAGGCTGGA
ATTTGAACTTTGTTGcaattgttttaaagtttgaaaCTTTAGAATAATAA
ATCTATTATTTGGAAGGAGTGAGAATATTGCTTTTTGGTTTCACCAACTC
TAACTTCAACAAAAAGATATCCTAGACATAGACAGGATCATTATTTTGct
aaaacacttttaaaagCAAGAACATTTATTTCTGTATGAAGAGTTTGACG
CAATGGCGTatttaagcccgaagggctaatagcgaatctccttggtagaa
TTTGAaaccaacaaatcctaccaaagctgCGTGGCTTAGAGCGGCCCGCC
TGATTTTAACACATATGGcagattgaaacaaaaatttaccactgaatttc
gaaaaaaatatcactcggAAACAAAGGAATTGAAAGATTCAATCCGTCGA
CAATAACACGTGGCATATCTTAGGGCTTccctttttcttgcctgagaaag
gttagagatttgcttctagccctttgggcttatacttcattgcttTGACG
GGCGGCAATGCTTGTTAAAGTTTACCATACATATATTTTGAAGACCTTAT
TGGACAGTTTGCTAATTAcgtttatattttcttttaattttaggCAAGGG
GAGGGAATGACAGGCCCATATTTCCAACACAACATATACAATATGAGCAG
CGAACCACATTTCCGGTCTGAAAGTCCAATTCCTCGTAGTCCACGATTCG
GTAGTTTACGACGACGAAAACGCATCGACCGAGAATATTTTGATGATACG
AGTGAAGGCTCGGATGGGAGGACGAGTTCCGACGAATATGAATCTTCATC
AAATCAAACATCGAAAAAAATGGACGATAATAACAACACAAATCAAAAGA
ATCGAAAAAACAGTCATTTTGCTTTTAGTAATGTTaagaaaaagattacg
tcaaCTTTTCAGCGTCGGCATTCTGTGTCAATGCACCCTCCCTCAGCGAC
AGTTCAAGGTAAACAATTACCGATTCGACGATCGTCAACGACCGGAAATC
AATCACCAAGACTTTTACGTCAATCTTCGTTTGATGAGAGCCATACCGCC
GTACATAAACGTAAAACGTCGCTACGACGACAAGTTACCATGGCAGCTGT
ACGTTTACACGAACAAAGTCAAGTCAGCGGTAGTAACCCAATGTTAGAca
gaattttacaaaaaagcCAATTTCAACTTGAATCAAGTTCCTCTACACCG
GATATTAAATCACATTTATCTTTGAAAAAGAcacatttaaaaacatttaa
aattcaTATACTTGGAAGCAAGTCCGTCGGAAAAACAGGTTGGTATCGCC
TTCTTATGTTCTTTGGAAGTAACACTCgctaatttatcaatttttctgat
tttacgGTTCCACACGAAGCTTAGAAATGATGTAGCAGCACATTCCTCAT
TTTATTGGATTTGCTTGATTAATTTTTGCCAATcgcataaaataaatttt
agtcatttttaatcaattatagaaatatttcatgtttttcagCTCTGACG
GTGCGTTTTCTAACGGGAAGATACATTCACGAATATAAATCAGCAGCAGG
TAAGCAACGACGTCATTAAGACGTTATTGAGTGTTTAGCAAAGGACCTAA
GTAAAATACTTGATAAGACTCTCATGGATCGGTCCACTCCAAATCTAATA
TTTGAGTCATAAAAAGGATCACGCCATTACACCAAAAAATAGGCCCACTC
ACACTATCGCGCAAGCGACTGAGGAGGCGTGGTAATAAAAGGCTAAGATT
AAGATCATAGTCATGATGTCTCTCTTTAACTTTAATCCCTGCTAGCTAGA
GGACTATGAGCTGGTAAGATTCGATAAACTGAGGTTAAAGGTGAACTTTG
CAATAATCTATATTTTTCCGACGTTTTATTTTGTAGAAGAAACATACACA
CGTGTGATGAAatatgaagatgaagaagtcaATGTTAAAATACTCATCAA
TGATATTGAATCTATGGTGAGTTAAATatggtttttatgaaattttttga
acaGCAGGATGTAAACAATACCTCTTGTCTTATAAATCCTTTGGTACAAA
TGCATTTTCAACAAATGCTAGGATTCGTatcttattttttgacaaaaatt
agcACTTTGGTTGACGCTACAATGCATTCTAAAACGGATCGAAAtcaact
tttgtttttattttcatatgaCTTTTTCTTGTTCAAGCTTTTTCTGAACA
CTTTTAACAATACCtttttctcacagacccggtggggtTTTACCAgctag
tggggataaaattaacggaccaaaactcgatgagATTGacattcccatgt
tttttatggctggggatttgaattcctttgttttccAGCCAGAAAAGGGG
ATGACATTCTAGGtaatttttccagtgagaagggttcccagtgggtctgt
gagaagagggtgtttgACAATGTCATGTAAATTTACAAATGTAATAAAAT
TGGGTAAATTGTATGATTCAGATACAGATGGGTAGaagatttaaaacaaa
aatacgaaaaaaaatACTCTAAAACTCTTGGACAAATATTTCATCCTGTT
CTGGAGGAGTCACAGAAAGTGAGCCACAAGTCAAAAATACACATGAATTG
AAATGATAAAGGATGATATCAATATTTTAGTGGCAATGCTCTTTGTTATA
CGTTTTAGAGAATTAAATTGATGCTAAgtagattaaaaataatttgaaga
taATTTCTTGCATGTAATAATGCTGCGGGAGTCAATCGGAAATAATAAAG
TATGTCTTCCAAATCAGATAGACAATGGATTTAATGTTTCCTAATCAGCG
GAAGTGAGAATTACAAAGAAATCGTCAGCCAACAccaaaccaaaccaaac
gcCCACGATTCATTCTGctcttcaaaaaaccttttcgTGTGTCTCTACAA
TAAGAGTCTGGTAATTGCTACCAAATTCAGTTGTTTTGTAGACTTTAGAG
ACAAGTGCGTAACGTTTGTGAGGTTCATGTAACGATAAAAAATACAACAC
AATATTTCAAGATTATGCGATACTTTCCGGCACCCGAGACCAGGGCTAAA
ACTCatcaaataaaatataaataaaaatatcctTGATGTTCACCCTGGGA
ACGAAGGTGGCTACACAGTACAGCGTATTTGATTAGCATCTATGGCAAAT
CTTTACCGCGATGTATTTTCGATAAAATAGAGTGCATTTTAGTTTGTGAA
CTGCGCAGCAGGACGGCTCTGTGGAAAATATATGTAAACAAAGTGTAAGG
AGGTTTAAGCATTGAACATATAACTTTGTACTTCAAGAAGAGGCAAAAAA
CGAGCCTTGAAAGTAAGAAATTAGAAACCTGTCGGTAAATTATTAAAACC
TCGTATTTTATGTTAAGTGTATGGTTAGTAAAATCAACAAATAACTTTCA
GGTACGGAAATACCAAAgtaacctcaaatcaaaacaaaacattaggTAAT
TTTACTCACGACCATCACAAAAGTCCTTTAGGGGAttacaatgtttttat
tttttggtgtATTTTGTATTCTCTCGTGTTTTCATTGCAACATCTCTACA
TTCCAGGAGTATCAAATTAAATCTTGGCGTCAAGACTTATCTTTAGGAGC
CATAGAGCCTCTCACATCAGTACTGTTACTGCATAGTCTAGCATACTAGA
GACGAAGGGAAAAATTGTAGTCTATTCAAACTGATATTATTCCGTTAcga
ttatcgtattatcatctaacacccatattactgtattacataGATTGTGA
ATGACTCCAGTCTATTACTTCAAAGAAAACAATCTACATGGGGTTGCAAC
CGTTTCTTAAACCTCGAATCAAGTCTCAAaacacccctatctcacagccc
ctgtgtaactttttttctcagtggggataaaaattcttattgaaatcata
acggggatagaaattcctttgttctaaggttaaaaaattcagtggcaaTG
GATTTGAAGCGcagtttttaaatattgaatttcgaatgtggatgaaataa
aagttaatttccaAGTGGAACTGAAACTCTAAGGTATTTTCCAACCggga
aaaactttttgtcaatctttccagtggggctgggctcccagcgggtctgt
gacagaGGGATACCTCAAAGGAatttaaaaagatttcaaagttaaAAATA
CATCATTTTCGAGTTTCAAAAATGAGTAATTCTGGGAATCTTAGTCATCA
TCATTTAATTGACtttaaaatatcactttttgCGGTTATTTTCAATATCC
TGTTATTATTTCTCATAAATTACATAGAGAGGTACAATCTCATTTgaagt
gtttttcaaaataaaagccaTACCTAACGACCATAACACTGACTCAATTT
GTATTACGTAGTGCTTAGTCTTTTATTgggcttattatatgcttaattTA
GAAAGTAAAGTTTGATTTACTCAAATCTCTCTGAGCATCTGATAATAATT
CAAGAAGATCAACAATAAAAAGACTTCACCAAGGTTTTGGTGTTGGTAAA
CTAAATTGTTTCAAACTTCTCATTTATTGctttatggacgttgtgaatgt
tagGCGGACGTTCAAACAACATATCATCTGTCAGCTATGTGACCAGTATT
GATGACAAATTAAAAGCATGAGTTTTGAAAAGCCGGTCACATAGATTCTA
GATATGAATTCTTTTACCACGTTCGAGCGTGGGTTGAACTTCCTGATGTG
ATCTACAATTTCTTAATTCAATATgtcatttataaaaatattcataaatT
GTAATAGATTTGCGGCAGGCAAAATCCTATCGGGAAATGTTCTTTGATAG
ATTtccttaaaatataaatatttgatACTTTAATCTTGGAATGACGAAAT
TCGGTTGATGTTTACTTTAAGTAAATACGCCTACTCCTTATCTCATTCGT
TATATCCGAACATATTGCCCTATCGAATTATCAAACTTCCAAATTACATT
ATTTTTGACATGTTTTCAATAAACTTCACTCTGCCCTAAAACGGCTTAAA
Gtatgtccagatataattggcagtggagacaagaatgcctgtaacttttg
atagtcaaatataattatgaaaatttttttttgcttgttttagagaatca
aaagcgctatattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNaataccccttggtagcacttttctgtgaaatatcaaatctcc
aatttattactaaaaacgggggttatgttatcttttttgaacagtgcaag
taaaagttggaaagtgtcggtttattggtattattggtatcattgattat
ttcgaaacgaagtgaaatcacagtataattgcttttattgaaaagataag
catgaacttatattgcctttgttatttNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagtgctaccaagg
ggtatttcgggtcccatatcttccgaaggacttttctgtttgccttgaaa
tttaaaaaacttcttaacctaaggtcgAACTatcactggtgtaaaaatga
atgttatagcataagtggaaaaaagctcaatttttgcaatcgtaaattta
accgctaaaagttgcgaatttttcaaccaaaaatacattcaaatatagcg
cttttgattctctaaaacaaccaaaaaaaaattccataattatatttgac
tatcaaaagttacaggcattcttgtttccactgccaattatatctggaca
gactttagttataTTCTTCAGTTTCCATTCTTGTTTTTTACCCAACGCCC
TTCATTTTATATCGGATAGTTATTTACACATTGAGCTCCAGGATCTGAGA
CAGGGTTGTTCATCTCACAGTTTTGAACATAAAGCCTGGACAAATGTaga
gttatcgtccgttacagtgatagtaaaggcggcaAAGTATGGCGGTaggg
cgttatggcggtatacagAAAAAATCGgtgggagagtttcgaagaaacga
ctGGCAAACTCTAATGGCTATAAACTCTTTTCagcccgtttgcgaatttt
cttcggctttgttcttattttttagataGTGACTTGTcatagactatagc
atagtctaggaCAATTGGTATTGGTATAAGTTATAGTCTCAGAACAAGTT
GAAAATGCTATTATATCCAAtgtaaaatctaaaatatttcattaaCTTCC
TTTCTTCGTTTTTAGGAAAATGACATTGAACTTGGTCAAAATTCTGGCAT
CATGATTTTATACTCCATCGTTGACCGCACCTCATATGATTATgcgaaat
ttgttttaaattatTTATCAGAGAACAATATAACTGGTTACTACCCTGTC
ATGCTAATGGGTACTAAACGAGATCTATCACGCATGCGTCAGGTGGACCG
CAAGGAATCATTCAAGGTTGCTACACAATACAATTGTACACCTTTTGACG
TTTCGTCGGCAAGTAATCGACGTGTGACGGAAAGTTTTCATGCAATGTTC
CGACAAATTGAAATTCGAAATTTATTGAATCAAAATGAAGGTATTGACGC
ACCTACCATCGTTAATCCACCTATTGTTGCAAGGTCAGGTAAACTCCGGT
ATGGAACTGCATAGGAAAATTCAATCACAAAATAAGAGTCGAATGAATTT
TAACATAACACGGATTTTTAAATGAAGCCGCTGGATTAGAGACAAGATAA
GAGAGAATAACAAATTTATTGAATTATTAATATTATATTGTAACTCTCTC
CTCAAAATCGGCTGTCACAATAATAATTCgatatcatttttattttaaac
ttgTCGATATGTATATATAAGATTTGTAATttcatttcgaaaaataaagc
TGTGCTTTCTAATGAAACGAACCAAAAGAAGTGACATAGAAGTGATAAAA
ACCCATACTCTAAAACCCCATTGGGGCTTAGAGAATG Coding sequence (CDS) from alignment at sc0000400:65958..75844+ >TCONS_00021916 ID=TCONS_00021916|Name=TCONS_00021916|organism=Clytia hemisphaerica|type=CDS|length=6405bp|location=Sequence derived from alignment at sc0000400:65958..75844+ (Clytia hemisphaerica)
ATGGTTGCGGCTGTTCGAAAAAGTGCAATTGTTCCACCACCCCAAACCGG
gCAAGGGGAGGGAATGACAGGCCCATATTTCCAACACAACATATACAATA
TGAGCAGCGAACCACATTTCCGGTCTGAAAGTCCAATTCCTCGTAGTCCA
CGATTCGGTAGTTTACGACGACGAAAACGCATCGACCGAGAATATTTTGA
TGATACGAGTGAAGGCTCGGATGGGAGGACGAGTTCCGACGAATATGAAT
CTTCATCAAATCAAACATCGAAAAAAATGGACGATAATAACAACACAAAT
CAAAAGAATCGAAAAAACAGTCATTTTGCTTTTAGTAATGTTaagaaaaa
gattacgtcaaCTTTTCAGCGTCGGCATTCTGTGTCAATGCACCCTCCCT
CAGCGACAGTTCAAGGTAAACAATTACCGATTCGACGATCGTCAACGACC
GGAAATCAATCACCAAGACTTTTACGTCAATCTTCGTTTGATGAGAGCCA
TACCGCCGTACATAAACGTAAAACGTCGCTACGACGACAAGTTACCATGG
CAGCTGTACGTTTACACGAACAAAGTCAAGTCAGCGGTAGTAACCCAATG
TTAGAcagaattttacaaaaaagcCAATTTCAACTTGAATCAAGTTCCTC
TACACCGGATATTAAATCACATTTATCTTTGAAAAAGAcacatttaaaaa
catttaaaattcaTATACTTGGAAGCAAGTCCGTCGGAAAAACAGCTCTG
ACGGTGCGTTTTCTAACGGGAAGATACATTCACGAATATAAATCAGCAGC
AGAAGAAACATACACACGTGTGATGAAatatgaagatgaagaagtcaATG
TTAAAATACTCATCAATGATATTGAATCTATGGAAAATGACATTGAACTT
GGTCAAAATTCTGGCATCATGATTTTATACTCCATCGTTGACCGCACCTC
ATATGATTATgcgaaatttgttttaaattatTTATCAGAGAACAATATAA
CTGGTTACTACCCTGTCATGCTAATGGGTACTAAACGAGATCTATCACGC
ATGCGTCAGGTGGACCGCAAGGAATCATTCAAGGTTGCTACACAATACAA
TTGTACACCTTTTGACGTTTCGTCGGCAAGTAATCGACGTGTGACGGAAA
GTTTTCATGCAATGTTCCGACAAATTGAAATTCGAAATTTATTGAATCAA
AATGAAGGTATTGACGCACCTACCATCGTTAATCCACCTATTGTTGCAAG
GTCAGGTAAACTCCGGTATGGAACTGCATAGATGGTTGCGGCTGTTCGAA
AAAGTGCAATTGTTCCACCACCCCAAACCGGgCAAGGGGAGGGAATGACA
GGCCCATATTTCCAACACAACATATACAATATGAGCAGCGAACCACATTT
CCGGTCTGAAAGTCCAATTCCTCGTAGTCCACGATTCGGTAGTTTACGAC
GACGAAAACGCATCGACCGAGAATATTTTGATGATACGAGTGAAGGCTCG
GATGGGAGGACGAGTTCCGACGAATATGAATCTTCATCAAATCAAACATC
GAAAAAAATGGACGATAATAACAACACAAATCAAAAGAATCGAAAAAACA
GTCATTTTGCTTTTAGTAATGTTaagaaaaagattacgtcaaCTTTTCAG
CGTCGGCATTCTGTGTCAATGCACCCTCCCTCAGCGACAGTTCAAGGTAA
ACAATTACCGATTCGACGATCGTCAACGACCGGAAATCAATCACCAAGAC
TTTTACGTCAATCTTCGTTTGATGAGAGCCATACCGCCGTACATAAACGT
AAAACGTCGCTACGACGACAAGTTACCATGGCAGCTGTACGTTTACACGA
ACAAAGTCAAGTCAGCGGTAGTAACCCAATGTTAGAcagaattttacaaa
aaagcCAATTTCAACTTGAATCAAGTTCCTCTACACCGGATATTAAATCA
CATTTATCTTTGAAAAAGAcacatttaaaaacatttaaaattcaTATACT
TGGAAGCAAGTCCGTCGGAAAAACAGCTCTGACGGTGCGTTTTCTAACGG
GAAGATACATTCACGAATATAAATCAGCAGCAGAAGAAACATACACACGT
GTGATGAAatatgaagatgaagaagtcaATGTTAAAATACTCATCAATGA
TATTGAATCTATGGAAAATGACATTGAACTTGGTCAAAATTCTGGCATCA
TGATTTTATACTCCATCGTTGACCGCACCTCATATGATTATgcgaaattt
gttttaaattatTTATCAGAGAACAATATAACTGGTTACTACCCTGTCAT
GCTAATGGGTACTAAACGAGATCTATCACGCATGCGTCAGGTGGACCGCA
AGGAATCATTCAAGGTTGCTACACAATACAATTGTACACCTTTTGACGTT
TCGTCGGCAAGTAATCGACGTGTGACGGAAAGTTTTCATGCAATGTTCCG
ACAAATTGAAATTCGAAATTTATTGAATCAAAATGAAGGTATTGACGCAC
CTACCATCGTTAATCCACCTATTGTTGCAAGGTCAGGTAAACTCCGGTAT
GGAACTGCATAGATGGTTGCGGCTGTTCGAAAAAGTGCAATTGTTCCACC
ACCCCAAACCGGgCAAGGGGAGGGAATGACAGGCCCATATTTCCAACACA
ACATATACAATATGAGCAGCGAACCACATTTCCGGTCTGAAAGTCCAATT
CCTCGTAGTCCACGATTCGGTAGTTTACGACGACGAAAACGCATCGACCG
AGAATATTTTGATGATACGAGTGAAGGCTCGGATGGGAGGACGAGTTCCG
ACGAATATGAATCTTCATCAAATCAAACATCGAAAAAAATGGACGATAAT
AACAACACAAATCAAAAGAATCGAAAAAACAGTCATTTTGCTTTTAGTAA
TGTTaagaaaaagattacgtcaaCTTTTCAGCGTCGGCATTCTGTGTCAA
TGCACCCTCCCTCAGCGACAGTTCAAGGTAAACAATTACCGATTCGACGA
TCGTCAACGACCGGAAATCAATCACCAAGACTTTTACGTCAATCTTCGTT
TGATGAGAGCCATACCGCCGTACATAAACGTAAAACGTCGCTACGACGAC
AAGTTACCATGGCAGCTGTACGTTTACACGAACAAAGTCAAGTCAGCGGT
AGTAACCCAATGTTAGAcagaattttacaaaaaagcCAATTTCAACTTGA
ATCAAGTTCCTCTACACCGGATATTAAATCACATTTATCTTTGAAAAAGA
cacatttaaaaacatttaaaattcaTATACTTGGAAGCAAGTCCGTCGGA
AAAACAGCTCTGACGGTGCGTTTTCTAACGGGAAGATACATTCACGAATA
TAAATCAGCAGCAGAAGAAACATACACACGTGTGATGAAatatgaagatg
aagaagtcaATGTTAAAATACTCATCAATGATATTGAATCTATGGAAAAT
GACATTGAACTTGGTCAAAATTCTGGCATCATGATTTTATACTCCATCGT
TGACCGCACCTCATATGATTATgcgaaatttgttttaaattatTTATCAG
AGAACAATATAACTGGTTACTACCCTGTCATGCTAATGGGTACTAAACGA
GATCTATCACGCATGCGTCAGGTGGACCGCAAGGAATCATTCAAGGTTGC
TACACAATACAATTGTACACCTTTTGACGTTTCGTCGGCAAGTAATCGAC
GTGTGACGGAAAGTTTTCATGCAATGTTCCGACAAATTGAAATTCGAAAT
TTATTGAATCAAAATGAAGGTATTGACGCACCTACCATCGTTAATCCACC
TATTGTTGCAAGGTCAGGTAAACTCCGGTATGGAACTGCATAGATGGTTG
CGGCTGTTCGAAAAAGTGCAATTGTTCCACCACCCCAAACCGGgCAAGGG
GAGGGAATGACAGGCCCATATTTCCAACACAACATATACAATATGAGCAG
CGAACCACATTTCCGGTCTGAAAGTCCAATTCCTCGTAGTCCACGATTCG
GTAGTTTACGACGACGAAAACGCATCGACCGAGAATATTTTGATGATACG
AGTGAAGGCTCGGATGGGAGGACGAGTTCCGACGAATATGAATCTTCATC
AAATCAAACATCGAAAAAAATGGACGATAATAACAACACAAATCAAAAGA
ATCGAAAAAACAGTCATTTTGCTTTTAGTAATGTTaagaaaaagattacg
tcaaCTTTTCAGCGTCGGCATTCTGTGTCAATGCACCCTCCCTCAGCGAC
AGTTCAAGGTAAACAATTACCGATTCGACGATCGTCAACGACCGGAAATC
AATCACCAAGACTTTTACGTCAATCTTCGTTTGATGAGAGCCATACCGCC
GTACATAAACGTAAAACGTCGCTACGACGACAAGTTACCATGGCAGCTGT
ACGTTTACACGAACAAAGTCAAGTCAGCGGTAGTAACCCAATGTTAGAca
gaattttacaaaaaagcCAATTTCAACTTGAATCAAGTTCCTCTACACCG
GATATTAAATCACATTTATCTTTGAAAAAGAcacatttaaaaacatttaa
aattcaTATACTTGGAAGCAAGTCCGTCGGAAAAACAGCTCTGACGGTGC
GTTTTCTAACGGGAAGATACATTCACGAATATAAATCAGCAGCAGAAGAA
ACATACACACGTGTGATGAAatatgaagatgaagaagtcaATGTTAAAAT
ACTCATCAATGATATTGAATCTATGGAAAATGACATTGAACTTGGTCAAA
ATTCTGGCATCATGATTTTATACTCCATCGTTGACCGCACCTCATATGAT
TATgcgaaatttgttttaaattatTTATCAGAGAACAATATAACTGGTTA
CTACCCTGTCATGCTAATGGGTACTAAACGAGATCTATCACGCATGCGTC
AGGTGGACCGCAAGGAATCATTCAAGGTTGCTACACAATACAATTGTACA
CCTTTTGACGTTTCGTCGGCAAGTAATCGACGTGTGACGGAAAGTTTTCA
TGCAATGTTCCGACAAATTGAAATTCGAAATTTATTGAATCAAAATGAAG
GTATTGACGCACCTACCATCGTTAATCCACCTATTGTTGCAAGGTCAGGT
AAACTCCGGTATGGAACTGCATAGATGGTTGCGGCTGTTCGAAAAAGTGC
AATTGTTCCACCACCCCAAACCGGgCAAGGGGAGGGAATGACAGGCCCAT
ATTTCCAACACAACATATACAATATGAGCAGCGAACCACATTTCCGGTCT
GAAAGTCCAATTCCTCGTAGTCCACGATTCGGTAGTTTACGACGACGAAA
ACGCATCGACCGAGAATATTTTGATGATACGAGTGAAGGCTCGGATGGGA
GGACGAGTTCCGACGAATATGAATCTTCATCAAATCAAACATCGAAAAAA
ATGGACGATAATAACAACACAAATCAAAAGAATCGAAAAAACAGTCATTT
TGCTTTTAGTAATGTTaagaaaaagattacgtcaaCTTTTCAGCGTCGGC
ATTCTGTGTCAATGCACCCTCCCTCAGCGACAGTTCAAGGTAAACAATTA
CCGATTCGACGATCGTCAACGACCGGAAATCAATCACCAAGACTTTTACG
TCAATCTTCGTTTGATGAGAGCCATACCGCCGTACATAAACGTAAAACGT
CGCTACGACGACAAGTTACCATGGCAGCTGTACGTTTACACGAACAAAGT
CAAGTCAGCGGTAGTAACCCAATGTTAGAcagaattttacaaaaaagcCA
ATTTCAACTTGAATCAAGTTCCTCTACACCGGATATTAAATCACATTTAT
CTTTGAAAAAGAcacatttaaaaacatttaaaattcaTATACTTGGAAGC
AAGTCCGTCGGAAAAACAGCTCTGACGGTGCGTTTTCTAACGGGAAGATA
CATTCACGAATATAAATCAGCAGCAGAAGAAACATACACACGTGTGATGA
AatatgaagatgaagaagtcaATGTTAAAATACTCATCAATGATATTGAA
TCTATGGAAAATGACATTGAACTTGGTCAAAATTCTGGCATCATGATTTT
ATACTCCATCGTTGACCGCACCTCATATGATTATgcgaaatttgttttaa
attatTTATCAGAGAACAATATAACTGGTTACTACCCTGTCATGCTAATG
GGTACTAAACGAGATCTATCACGCATGCGTCAGGTGGACCGCAAGGAATC
ATTCAAGGTTGCTACACAATACAATTGTACACCTTTTGACGTTTCGTCGG
CAAGTAATCGACGTGTGACGGAAAGTTTTCATGCAATGTTCCGACAAATT
GAAATTCGAAATTTATTGAATCAAAATGAAGGTATTGACGCACCTACCAT
CGTTAATCCACCTATTGTTGCAAGGTCAGGTAAACTCCGGTATGGAACTG
CATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021916-exon-sc0000400-1491911889:65958..66466 | TCONS_00021916-exon-sc0000400-1491911889:65958..66466 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1510915933:65958..66466 | TCONS_00021916-exon-sc0000400-1510915933:65958..66466 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1575043694:65958..66466 | TCONS_00021916-exon-sc0000400-1575043694:65958..66466 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1491911889:68651..69345 | TCONS_00021916-exon-sc0000400-1491911889:68651..69345 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1510915933:68651..69345 | TCONS_00021916-exon-sc0000400-1510915933:68651..69345 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1575043694:68651..69345 | TCONS_00021916-exon-sc0000400-1575043694:68651..69345 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1491911889:69550..69606 | TCONS_00021916-exon-sc0000400-1491911889:69550..69606 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1510915933:69550..69606 | TCONS_00021916-exon-sc0000400-1510915933:69550..69606 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1575043694:69550..69606 | TCONS_00021916-exon-sc0000400-1575043694:69550..69606 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1491911889:69944..70023 | TCONS_00021916-exon-sc0000400-1491911889:69944..70023 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1510915933:69944..70023 | TCONS_00021916-exon-sc0000400-1510915933:69944..70023 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1575043694:69944..70023 | TCONS_00021916-exon-sc0000400-1575043694:69944..70023 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1491911889:75123..75844 | TCONS_00021916-exon-sc0000400-1491911889:75123..75844 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1510915933:75123..75844 | TCONS_00021916-exon-sc0000400-1510915933:75123..75844 | Clytia hemisphaerica | exon |
| TCONS_00021916-exon-sc0000400-1575043694:75123..75844 | TCONS_00021916-exon-sc0000400-1575043694:75123..75844 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000400 | supercontig | sc0000400:65958..75844 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007165 |
signal transduction |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
BLAST of TCONS_00021916 vs. Swiss-Prot (Human)
Match: RERG (Ras-related and estrogen-regulated growth inhibitor OS=Homo sapiens GN=RERG PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.051e-20 Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 1165 KIHILGSKSVGKTALTVRFLTGRYIHEYKSAAEETYTRVMKYEDEEVNVKILINDIESMENDIE----LGQNSGIMILYSIVDRTSYDYAKFVLNYLSENNITGYYPVMLMGTKRDLSRMRQVDRKESFKVATQYNCTPFDVSSASNR-RVTESFHAMFRQIEIRNLL 1653
K+ I G VGK+AL VRFLT R+I EY E TY +DE V+++IL D E+ I+ + G +++Y I DR S++ + N L E ++L+G K DL RQV +E K+AT+ C ++ S+ + +TE F+ + R++ R ++
Sbjct: 8 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEIL--DTAGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMV 173
The following BLAST results are available for this feature:
|
