|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021920 ID=TCONS_00021920|Name=TCONS_00021920|organism=Clytia hemisphaerica|type=transcript|length=1141bp
gtattttgattaCATCTTTGTGATAAAGTAATATACTTGATTGATTGATA
GGAACGTTTGTCAAAAGCATCTGCTAGTCTGTTGCTAGTCCTTTTTCCCT
TGTTTTTGGGATAGCAGTCTTGGTAAAACGCTAGTATTTTTTTATGGATT
ATGGCAAACGTAAAGAGcaataaaaaggagaaaatcaaaaaatttatcca
ctcAGCAGCAACTAATCTAACATACatggatatttttattccagcTGCCC
TACCTTCAACATACCATGGTCAAAACAAAccgaagaaaaatcaaaatggt
ggAAAACAGAAAATTAGACTCGATCACCCAGATTTGGGAAAAGGTGGAAG
TCAAAAGGCTTATTATTGGTATCAGATGACTGGCAAAGACAAACATGTCG
TCCCTACAGCTAAAGATGAAATAAAACCTACAGAAAAGAAACGAAATTCA
TTGGTCATGAAAACAAGGAAAATACAAGTCCAACCTTCCAACCTTGGTAA
AAGTGAAAATACTCCAGATGGGAATATTTCAACGAAAAGTATCAACAATG
ATGAAGAAGCTATGAAACGGGTAGATGATCTAGAGGCTGAGAAGACAAGC
CTGGTTGAACTTTTACAAGTTCTACCCTCTAGTTGTAAGATACCAGAACG
CATTAAAACACCTATACAATCTTCACCAGAACCTAATCAAGAGGTCAATT
TACCCTCCACTGAACCAAAGAAAATCGTAGCTTTTTTACCAAGAGTTATC
GAAGTCCAACCATATAGCAATGAGAACGATGATATTCAAAATTCGGACAA
TGTACAATTTTCGGACGATATAGAAAGTCTTGATTCTGATCGGATTGACG
ACGAATGTTTAAAAAGGAATAATATTGAAATTAAAGAATTTCTGTTTGAC
TGTAATAAAACCGATGACTCTAGACAAGACCCTCCTGGTTATATTCCAAA
GTATAAACCATACGTACCTATGTCGTATGATATTTATCCTTATAAATAAT
GAAAAGACAACACTTAGACCATGTATGGATGTTACGGTTTCGTATCGTTC
CGGTATGGTTTCCGTTACGGATCTAGAATGCTCATATTGGTTTcagaacg
tttcggagcaagaaaacggagcagttccgtccCGATGAAAA Run BLAST on NCBI transcript from alignment at sc0000400:187565..188705+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021920 ID=TCONS_00021920|Name=TCONS_00021920|organism=Clytia hemisphaerica|type=transcript|length=1141bp|location=Sequence derived from alignment at sc0000400:187565..188705+ (Clytia hemisphaerica)
gtattttgattaCATCTTTGTGATAAAGTAATATACTTGATTGATTGATA
GGAACGTTTGTCAAAAGCATCTGCTAGTCTGTTGCTAGTCCTTTTTCCCT
TGTTTTTGGGATAGCAGTCTTGGTAAAACGCTAGTATTTTTTTATGGATT
ATGGCAAACGTAAAGAGcaataaaaaggagaaaatcaaaaaatttatcca
ctcAGCAGCAACTAATCTAACATACatggatatttttattccagcTGCCC
TACCTTCAACATACCATGGTCAAAACAAAccgaagaaaaatcaaaatggt
ggAAAACAGAAAATTAGACTCGATCACCCAGATTTGGGAAAAGGTGGAAG
TCAAAAGGCTTATTATTGGTATCAGATGACTGGCAAAGACAAACATGTCG
TCCCTACAGCTAAAGATGAAATAAAACCTACAGAAAAGAAACGAAATTCA
TTGGTCATGAAAACAAGGAAAATACAAGTCCAACCTTCCAACCTTGGTAA
AAGTGAAAATACTCCAGATGGGAATATTTCAACGAAAAGTATCAACAATG
ATGAAGAAGCTATGAAACGGGTAGATGATCTAGAGGCTGAGAAGACAAGC
CTGGTTGAACTTTTACAAGTTCTACCCTCTAGTTGTAAGATACCAGAACG
CATTAAAACACCTATACAATCTTCACCAGAACCTAATCAAGAGGTCAATT
TACCCTCCACTGAACCAAAGAAAATCGTAGCTTTTTTACCAAGAGTTATC
GAAGTCCAACCATATAGCAATGAGAACGATGATATTCAAAATTCGGACAA
TGTACAATTTTCGGACGATATAGAAAGTCTTGATTCTGATCGGATTGACG
ACGAATGTTTAAAAAGGAATAATATTGAAATTAAAGAATTTCTGTTTGAC
TGTAATAAAACCGATGACTCTAGACAAGACCCTCCTGGTTATATTCCAAA
GTATAAACCATACGTACCTATGTCGTATGATATTTATCCTTATAAATAAT
GAAAAGACAACACTTAGACCATGTATGGATGTTACGGTTTCGTATCGTTC
CGGTATGGTTTCCGTTACGGATCTAGAATGCTCATATTGGTTTcagaacg
tttcggagcaagaaaacggagcagttccgtccCGATGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021920-exon-sc0000400-1491911889:187565..188705 | TCONS_00021920-exon-sc0000400-1491911889:187565..188705 | Clytia hemisphaerica | exon |
| TCONS_00021920-exon-sc0000400-1510915933:187565..188705 | TCONS_00021920-exon-sc0000400-1510915933:187565..188705 | Clytia hemisphaerica | exon |
| TCONS_00021920-exon-sc0000400-1575043694:187565..188705 | TCONS_00021920-exon-sc0000400-1575043694:187565..188705 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000400 | supercontig | sc0000400:187565..188705 + |
Blast
The following BLAST results are available for this feature:
|
