TCONS_00021962 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021962
Unique NameTCONS_00021962
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021962 ID=TCONS_00021962|Name=TCONS_00021962|organism=Clytia hemisphaerica|type=transcript|length=164bp
GTGACagtcaaaaatatgaaataaatatGAATATTAAACCAAAAGAGATT
ATTGTTCTATCGTCGGGTGATGAAGATTTCAATATAGTGAGGGAGAATGA
CAAAGTTAAAAACGAAGAATCATCGGATGCAAGCAGCAATGAATCAGAAA
CTTCTGATGATGAT
Run BLAST on NCBI

transcript from alignment at sc0000400:225002..225165

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021962 ID=TCONS_00021962|Name=TCONS_00021962|organism=Clytia hemisphaerica|type=transcript|length=164bp|location=Sequence derived from alignment at sc0000400:225002..225165 (Clytia hemisphaerica)
ATCATCATCAGAAGTTTCTGATTCATTGCTGCTTGCATCCGATGATTCTT
CGTTTTTAACTTTGTCATTCTCCCTCACTATATTGAAATCTTCATCACCC
GACGATAGAACAATAATCTCTTTTGGTTTAATATTCatatttatttcata
tttttgactGTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012328XLOC_012328Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021962-exon-sc0000400-1491911889:225002..225165TCONS_00021962-exon-sc0000400-1491911889:225002..225165Clytia hemisphaericaexon
TCONS_00021962-exon-sc0000400-1510915933:225002..225165TCONS_00021962-exon-sc0000400-1510915933:225002..225165Clytia hemisphaericaexon
TCONS_00021962-exon-sc0000400-1575043694:225002..225165TCONS_00021962-exon-sc0000400-1575043694:225002..225165Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000400supercontigsc0000400:225002..225165 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021962 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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