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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022026 ID=TCONS_00022026|Name=TCONS_00022026|organism=Clytia hemisphaerica|type=transcript|length=933bp
aaaacataattttagaaCCCTCGTCCTAGGGTCCTTCGACTACCTTTTTC
GTTTTACAATCTCACGTAAGTAGCTAAGCATACATAAGCACAATTATGTA
AATAACTTTCAATTCTAAGGACTCAACTTTACTGATAACTGAGCTGGGAC
TCGATTGCTCAAAAGCATAATGACATTGACAGATTACATCGTTTAAAATT
TAGACATACTACTACTGAAATGTTGTTGGCAAAAAGTCTTTGTATGTAAA
GGAGTTAAAATATCTGTGTTCAGTTCACACCAGGCGTTCTCATAATATTC
ATGGTATAAACGCCTTTATTGTTACCATGTTATATTCAAtatactctttt
ttataagcataacgtttataaggatacttaggctcaaattcggtaaaaag
caagcataatgctaagcattGCTCATCATATTGAGCCTTGACCCGTCCCA
ATCTTCccgtattcttataaaaaagtgtaaaaaaccttaCTGAACCTATA
TATTGGTTTTTGgaacatcatttttttcaaaaagtgaaaaagtctTTTTG
TTTGTTATGTTAAAGTGTGAAATCGCTACAACTCACAACCACAGCGGTTC
actgagaatttcaaaaatataaaattttttgaggtttttcaTTGTAATAA
AGTCTTTTCGCTTTTCAAGatacatttttgtattttgcctTTAACCTGTG
TCTCAGTAGAGCAAGTTTgatgtgaaattttttccaGACAAGTGAGAACC
CTTGTTTTATCTAATGGTCTAATATATCACGTGAAATATATTCTTCTCGG
aggttattattatttttggaaCCTTTTAGTATAACATCTTGTAGatttaa
ttgtatttttttctgctgaaaatttgatatcatttttatatgagtttttt
tttattatgacTGTCAATCTGTTGAAAAACGAG Run BLAST on NCBI transcript from alignment at sc0000403:208873..209877+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022026 ID=TCONS_00022026|Name=TCONS_00022026|organism=Clytia hemisphaerica|type=transcript|length=1005bp|location=Sequence derived from alignment at sc0000403:208873..209877+ (Clytia hemisphaerica)
aaaacataattttagaaCCCTCGTCCTAGGGTCCTTCGACTACCTTTTTC
GTTTTACAATCTCACGTAAGTAGCTAAGCATACATAAGCACAATTATGTA
AATAACTTTCAATTCTAAGGACTCAACTTTACTGATAACTGAGCTGGGAC
TCGATTGCTCAAAAGCATAATGACATTGACAGATTTCATCGTTTAAAATT
TAGACATANACTGAGCTGGGACTCGAATGCTCAAAAACATAATGACATTG
ACAGATTACATCGTTTAAAATTTAGACATACTACTACTGAAATGTTGTTG
GCAAAAAGTCTTTGTATGTAAAGGAGTTAAAATATCTGTGTTCAGTTCAC
ACCAGGCGTTCTCATAATATTCATGGTATAAACGCCTTTATTGTTACCAT
GTTATATTCAAtatactcttttttataagcataacgtttataaggatact
taggctcaaattcggtaaaaagcaagcataatgctaagcattGCTCATCA
TATTGAGCCTTGACCCGTCCCAATCTTCccgtattcttataaaaaagtgt
aaaaaaccttaCTGAACCTATATATTGGTTTTTGgaacatcatttttttc
aaaaagtgaaaaagtctTTTTGTTTGTTATGTTAAAGTGTGAAATCGCTA
CAACTCACAACCACAGCGGTTCactgagaatttcaaaaatataaaatttt
ttgaggtttttcaTTGTAATAAAGTCTTTTCGCTTTTCAAGatacatttt
tgtattttgcctTTAACCTGTGTCTCAGTAGAGCAAGTTTgatgtgaaat
tttttccaGACAAGTGAGAACCCTTGTTTTATCTAATGGTCTAATATATC
ACGTGAAATATATTCTTCTCGGaggttattattatttttggaaCCTTTTA
GTATAACATCTTGTAGatttaattgtatttttttctgctgaaaatttgat
atcatttttatatgagtttttttttattatgacTGTCAATCTGTTGAAAA
ACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022026-exon-sc0000403-1491911889:208873..209038 | TCONS_00022026-exon-sc0000403-1491911889:208873..209038 | Clytia hemisphaerica | exon |
| TCONS_00022026-exon-sc0000403-1510915933:208873..209038 | TCONS_00022026-exon-sc0000403-1510915933:208873..209038 | Clytia hemisphaerica | exon |
| TCONS_00022026-exon-sc0000403-1575043694:208873..209038 | TCONS_00022026-exon-sc0000403-1575043694:208873..209038 | Clytia hemisphaerica | exon |
| TCONS_00022026-exon-sc0000403-1491911889:209111..209877 | TCONS_00022026-exon-sc0000403-1491911889:209111..209877 | Clytia hemisphaerica | exon |
| TCONS_00022026-exon-sc0000403-1510915933:209111..209877 | TCONS_00022026-exon-sc0000403-1510915933:209111..209877 | Clytia hemisphaerica | exon |
| TCONS_00022026-exon-sc0000403-1575043694:209111..209877 | TCONS_00022026-exon-sc0000403-1575043694:209111..209877 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403 | supercontig | sc0000403:208873..209877 + |
Blast
The following BLAST results are available for this feature:
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