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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022106 ID=TCONS_00022106|Name=TCONS_00022106|organism=Clytia hemisphaerica|type=transcript|length=576bp
AAAGTAGCGCAAAAAAAGCCCAGTAGAAATACACTGGCTTTTTTTTGGAA
TTCTATGCATTTACACTTGggtgaaaaattagaaatggttttaaaatcaa
ttaacaccattttttttttgtttagaatCAGTAATAAGAAGACGGATCAA
AATTCAATAAGATATACCAGttttcatttttatgggAATACAATTGCGAT
CATTTATCCAGGTTACATTTTCCAACGTCGTAATATCATATTGATACACA
TCCATTGGTGAAGGCGAGAATCTGGAAACCCTCTGGAGAATACCCTCGTA
TCAGAAATCCGGTGGAGCACTCCGCCAGCCtccgccccactggaaaattt
agccaaaaaaTAACCTGAAGTTTTAACCCACCTTAAAACAACCAAATAAT
GACTTTACTCCTCATTTTTATCCACACTGAAGGAAAAAATCTTCACCGGG
GCGGCATTGAGACAGTGGCGTGTGAGTgagagaatgaaaaaaaaaacgcc
aatagaaagaaaagaaagaccaaCGAAGTTACAGTCTATTCATTAATTTG
ATTGTAATGATCAATGgcctcatttt Run BLAST on NCBI transcript from alignment at sc0000405:282412..283256+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022106 ID=TCONS_00022106|Name=TCONS_00022106|organism=Clytia hemisphaerica|type=transcript|length=845bp|location=Sequence derived from alignment at sc0000405:282412..283256+ (Clytia hemisphaerica)
AAAGTAGCGCAAAAAAAGCCCAGTAGAAATACACTGGCTTTTTTTTGGAA
TTCTATGCATTTACACTTGggtgaaaaattagaaatggttttaaaatcaa
ttaacaccattttttttttgtttagaatCAGTAATAAGAAGACGGATCAA
AATTCAATAAGATATACCAGGTAATCCTTTTTTATTGtctttgtattttg
atttggaaTTTAAACACGCGTTCTTCTTGTGCTCTGGGATGGGAGAAGGT
ATTTATCCACGCGGCCATAATTTCGATTTTCTGATGCGGAACAATACGAA
ACTTAGAATACGGGCATTGTGATAACGATGTTTCGGAATCCTGATCTTGC
CACTCTATGCTTATTTTTAGTTCTTCAGCGGTCTAGATTGGATGAATCAC
AACAATCCTTCCCTCgctatttcttctttttcttttcagttttcattttt
atgggAATACAATTGCGATCATTTATCCAGGTTACATTTTCCAACGTCGT
AATATCATATTGATACACATCCATTGGTGAAGGCGAGAATCTGGAAACCC
TCTGGAGAATACCCTCGTATCAGAAATCCGGTGGAGCACTCCGCCAGCCt
ccgccccactggaaaatttagccaaaaaaTAACCTGAAGTTTTAACCCAC
CTTAAAACAACCAAATAATGACTTTACTCCTCATTTTTATCCACACTGAA
GGAAAAAATCTTCACCGGGGCGGCATTGAGACAGTGGCGTGTGAGTgaga
gaatgaaaaaaaaaacgccaatagaaagaaaagaaagaccaaCGAAGTTA
CAGTCTATTCATTAATTTGATTGTAATGATCAATGgcctcatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022106-exon-sc0000405-1491911889:282412..282581 | TCONS_00022106-exon-sc0000405-1491911889:282412..282581 | Clytia hemisphaerica | exon |
| TCONS_00022106-exon-sc0000405-1510915933:282412..282581 | TCONS_00022106-exon-sc0000405-1510915933:282412..282581 | Clytia hemisphaerica | exon |
| TCONS_00022106-exon-sc0000405-1575043694:282412..282581 | TCONS_00022106-exon-sc0000405-1575043694:282412..282581 | Clytia hemisphaerica | exon |
| TCONS_00022106-exon-sc0000405-1491911889:282851..283256 | TCONS_00022106-exon-sc0000405-1491911889:282851..283256 | Clytia hemisphaerica | exon |
| TCONS_00022106-exon-sc0000405-1510915933:282851..283256 | TCONS_00022106-exon-sc0000405-1510915933:282851..283256 | Clytia hemisphaerica | exon |
| TCONS_00022106-exon-sc0000405-1575043694:282851..283256 | TCONS_00022106-exon-sc0000405-1575043694:282851..283256 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000405 | supercontig | sc0000405:282412..283256 + |
Blast
The following BLAST results are available for this feature:
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