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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022128 ID=TCONS_00022128|Name=TCONS_00022128|organism=Clytia hemisphaerica|type=transcript|length=1263bp
GCAAAAGAAATCACATTCTTATTTGGGACGTGGGTCTTCTACCGTACACA
TTCAAGAATGGGAAACGGGAAACATGAGAAGTCCGAGATGCGTTGTGATG
AAGAGCGTTTATTGTTGAACCTCTGTAGAAAAGGTGCATATAAGCAACTA
TGTGTGCTATTGCTGAATTTGAGTCCATACCCGCTTTAAGAGTACATACT
TTTTTTGCTACCATATGGAAACCACACTCAAGGAAATTACTCTTAAGTAC
GCCGACATGGCAACAAAGAAGGATGCACGCACAAGGCGAATTGATTCAAT
AAGCGAGCTCTAAAGACCTTGTGTAGACCTGATTCGATATTGGGTGTATG
AAACTTATTTTTGCCTTTGAGGTGTAATTAGAGGCGGTGTACAGTCTGTC
CCGAAAAAAAGCggacaattttttatttaaagttatCCTCATAATTTAag
acaaattttatgacttatatacttaatatttcgatttcaaaacaccccct
tctcacagacccggtaggatgtTTTCAGCaagtgggaataaaaataacgg
actgaaactcgatggggattgatattcctatattttttatggttggggat
ttcaattcttttgttttcaaatcaaaattcagtggggatgggaaaaatag
taaaaaaaagtagtAAGGATGtgttgatttgattattttcagtggggacg
aaaattggagaattttccaccgggacgaTTTCTTTGGCCGATTTCTCCAG
TGGATctgcgagaagggggtgtctcaAGACCCTCATTCATAACTCTTAAT
TTTGGGATTTTAATACCTATTGATTACAAAGAGAATTATAATCTCTACTT
CTATTCTAAGCTCAGTTTAGGtaatgagttttgaggattttaattTATAT
AAAGATTTTTTCGGGGCACACTGTATAATAAATAGCAAAACAGTTTGATT
TTAACCTAAAAGTGGCCCTaaattcttttatcatttttactaaaaacttc
aggccgccattttgaagcctattgaaattttgaatgcaGTTTTTTTATGG
ATTGCCAATTTTTTAGAGAAATTATcttgtaaataaattttattttttca
gagatTGCTAACTAAAGAAACACCTGTAAAATTTTATCGCGATGCACTTT
TTACAGAAATTTAGTTATTAATTGTTCGGGATAAGGGGACTAATATTTCC
TAGGagactagactagagtctacttctggctgaatttagctttttgataa
tttttaatgacgc Run BLAST on NCBI transcript from alignment at sc0000405:39112..40374 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022128 ID=TCONS_00022128|Name=TCONS_00022128|organism=Clytia hemisphaerica|type=transcript|length=1263bp|location=Sequence derived from alignment at sc0000405:39112..40374 (Clytia hemisphaerica)
gcgtcattaaaaattatcaaaaagctaaattcagccagaagtagactcta
gtctagtctCCTAGGAAATATTAGTCCCCTTATCCCGAACAATTAATAAC
TAAATTTCTGTAAAAAGTGCATCGCGATAAAATTTTACAGGTGTTTCTTT
AGTTAGCAatctctgaaaaaataaaatttatttacaagATAATTTCTCTA
AAAAATTGGCAATCCATAAAAAAACtgcattcaaaatttcaataggcttc
aaaatggcggcctgaagtttttagtaaaaatgataaaagaatttAGGGCC
ACTTTTAGGTTAAAATCAAACTGTTTTGCTATTTATTATACAGTGTGCCC
CGAAAAAATCTTTATATAaattaaaatcctcaaaactcattaCCTAAACT
GAGCTTAGAATAGAAGTAGAGATTATAATTCTCTTTGTAATCAATAGGTA
TTAAAATCCCAAAATTAAGAGTTATGAATGAGGGTCTtgagacaccccct
tctcgcagATCCACTGGAGAAATCGGCCAAAGAAAtcgtcccggtggaaa
attctccaattttcgtccccactgaaaataatcaaatcaacaCATCCTTa
ctacttttttttactatttttcccatccccactgaattttgatttgaaaa
caaaagaattgaaatccccaaccataaaaaatataggaatatcaatcccc
atcgagtttcagtccgttatttttattcccacttGCTGAAAacatcctac
cgggtctgtgagaagggggtgttttgaaatcgaaatattaagtatataag
tcataaaatttgtctTAAATTATGAGGataactttaaataaaaaattgtc
cGCTTTTTTTCGGGACAGACTGTACACCGCCTCTAATTACACCTCAAAGG
CAAAAATAAGTTTCATACACCCAATATCGAATCAGGTCTACACAAGGTCT
TTAGAGCTCGCTTATTGAATCAATTCGCCTTGTGCGTGCATCCTTCTTTG
TTGCCATGTCGGCGTACTTAAGAGTAATTTCCTTGAGTGTGGTTTCCATA
TGGTAGCAAAAAAAGTATGTACTCTTAAAGCGGGTATGGACTCAAATTCA
GCAATAGCACACATAGTTGCTTATATGCACCTTTTCTACAGAGGTTCAAC
AATAAACGCTCTTCATCACAACGCATCTCGGACTTCTCATGTTTCCCGTT
TCCCATTCTTGAATGTGTACGGTAGAAGACCCACGTCCCAAATAAGAATG
TGATTTCTTTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022128-exon-sc0000405-1491911889:39112..40374 | TCONS_00022128-exon-sc0000405-1491911889:39112..40374 | Clytia hemisphaerica | exon |
| TCONS_00022128-exon-sc0000405-1510915933:39112..40374 | TCONS_00022128-exon-sc0000405-1510915933:39112..40374 | Clytia hemisphaerica | exon |
| TCONS_00022128-exon-sc0000405-1575043694:39112..40374 | TCONS_00022128-exon-sc0000405-1575043694:39112..40374 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000405 | supercontig | sc0000405:39112..40374 . |
Blast
The following BLAST results are available for this feature:
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