|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022132 ID=TCONS_00022132|Name=TCONS_00022132|organism=Clytia hemisphaerica|type=transcript|length=895bp
AAATAGGGAGATATGCAAATGAACTAAAATCTACGCAATGATGTAGAAAT
TCGAGATCTCAAATATCTACTACTATGCGTAGAAATAGTCATAAACCTTG
CAAGTGTagtatgacgtaatgttattgCTGAAAGGAAATCGAAATGGCGA
ACCTTGCAGTGGGAACAAAAAGTAGAACGaaaaatgaataatgaaaagTT
TAGGCAATTCAGATGGGAATTCCAATTAGGTAACCTGATGATGGTGTCTG
AGGCAGGCTAGGTGAATTGATTAGGCAGATCATATATTGGTTGGGCAAAT
TGCATTATTCCAATTGGTACTGCAGATGATGATCTTGCATGGCATGGGAC
GACATGGCATGACATGATGGGCTAGGCTGGATCACAAATCAAATATATGT
TGTGGGATCAATCATCTGGGATGATGGGATAGGAGGATCAGTTGGGTAAA
ATCAGCCAACACTGAATCATCTGGTTATAGGGTGGGGAATGGCTAGAGGT
AGGACAGGATGGGATTGGCTTGTTATGATGGATTCAGCTGGGTTTCTGGG
ATCTGATCTGATCTGTGGATGGATGGAATTTGACGCATATTAGAGTAGGG
TGGAATTTGGCAGGATAGGGTTGAATTTGCAGGATGAGTTAGGGATCGCA
TTGTATTGGATGGGATTCGGGATTGGCTGTGTAGTAGGGTGGGATCTTCT
GGGTGTTCTGGGTGGATGGATGTATGGAATTCATTGGGAAGGGATGGATG
AGTTTGGCTGGGTAAAGGGTGGGATCGTCTGGGTGGATGGATGTATGGAA
TTCATTGGGAAAGGATGAGATGGGATCAGCTGGATAAATGTGATTGGCTG
GGTACGCTGGAATCAACTGGGTACGGTGAAATCAGCTGGGCACGG Run BLAST on NCBI transcript from alignment at sc0000405:167071..167965 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022132 ID=TCONS_00022132|Name=TCONS_00022132|organism=Clytia hemisphaerica|type=transcript|length=895bp|location=Sequence derived from alignment at sc0000405:167071..167965 (Clytia hemisphaerica)
CCGTGCCCAGCTGATTTCACCGTACCCAGTTGATTCCAGCGTACCCAGCC
AATCACATTTATCCAGCTGATCCCATCTCATCCTTTCCCAATGAATTCCA
TACATCCATCCACCCAGACGATCCCACCCTTTACCCAGCCAAACTCATCC
ATCCCTTCCCAATGAATTCCATACATCCATCCACCCAGAACACCCAGAAG
ATCCCACCCTACTACACAGCCAATCCCGAATCCCATCCAATACAATGCGA
TCCCTAACTCATCCTGCAAATTCAACCCTATCCTGCCAAATTCCACCCTA
CTCTAATATGCGTCAAATTCCATCCATCCACAGATCAGATCAGATCCCAG
AAACCCAGCTGAATCCATCATAACAAGCCAATCCCATCCTGTCCTACCTC
TAGCCATTCCCCACCCTATAACCAGATGATTCAGTGTTGGCTGATTTTAC
CCAACTGATCCTCCTATCCCATCATCCCAGATGATTGATCCCACAACATA
TATTTGATTTGTGATCCAGCCTAGCCCATCATGTCATGCCATGTCGTCCC
ATGCCATGCAAGATCATCATCTGCAGTACCAATTGGAATAATGCAATTTG
CCCAACCAATATATGATCTGCCTAATCAATTCACCTAGCCTGCCTCAGAC
ACCATCATCAGGTTACCTAATTGGAATTCCCATCTGAATTGCCTAAActt
ttcattattcatttttCGTTCTACTTTTTGTTCCCACTGCAAGGTTCGCC
ATTTCGATTTCCTTTCAGcaataacattacgtcatactACACTTGCAAGG
TTTATGACTATTTCTACGCATAGTAGTAGATATTTGAGATCTCGAATTTC
TACATCATTGCGTAGATTTTAGTTCATTTGCATATCTCCCTATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022132-exon-sc0000405-1491911889:167071..167965 | TCONS_00022132-exon-sc0000405-1491911889:167071..167965 | Clytia hemisphaerica | exon |
| TCONS_00022132-exon-sc0000405-1510915933:167071..167965 | TCONS_00022132-exon-sc0000405-1510915933:167071..167965 | Clytia hemisphaerica | exon |
| TCONS_00022132-exon-sc0000405-1575043694:167071..167965 | TCONS_00022132-exon-sc0000405-1575043694:167071..167965 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000405 | supercontig | sc0000405:167071..167965 . |
Blast
The following BLAST results are available for this feature:
|
