TCONS_00022133 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022133
Unique NameTCONS_00022133
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022133 ID=TCONS_00022133|Name=TCONS_00022133|organism=Clytia hemisphaerica|type=transcript|length=122bp
TACCCATTTAACTTTAATCATAAAAACATTTCTCCATTATTTGCTTGGAA
TGTCATCAAAATCTCCCAActgaattttctaattttctttttaattttct
ttttcattcatttattcTCTAT
Run BLAST on NCBI

transcript from alignment at sc0000405:168834..168955

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022133 ID=TCONS_00022133|Name=TCONS_00022133|organism=Clytia hemisphaerica|type=transcript|length=122bp|location=Sequence derived from alignment at sc0000405:168834..168955 (Clytia hemisphaerica)
ATAGAgaataaatgaatgaaaaagaaaattaaaaagaaaattagaaaatt
cagTTGGGAGATTTTGATGACATTCCAAGCAAATAATGGAGAAATGTTTT
TATGATTAAAGTTAAATGGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012412XLOC_012412Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022133-exon-sc0000405-1491911889:168834..168955TCONS_00022133-exon-sc0000405-1491911889:168834..168955Clytia hemisphaericaexon
TCONS_00022133-exon-sc0000405-1510915933:168834..168955TCONS_00022133-exon-sc0000405-1510915933:168834..168955Clytia hemisphaericaexon
TCONS_00022133-exon-sc0000405-1575043694:168834..168955TCONS_00022133-exon-sc0000405-1575043694:168834..168955Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:168834..168955 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022133 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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