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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022134 ID=TCONS_00022134|Name=TCONS_00022134|organism=Clytia hemisphaerica|type=transcript|length=3760bp
TAGCCATTGCATTTGATGAAATACATTTACCTAACTTGATTATATCTTAT
TGATGAAAGGTATTACATTATAATAAGCTTAAATATAGTACTAACTCTCT
AAGATCTGGACATGTTCAACAAATATCAAATGTccgaattcatgatatgt
accatTGCAATGCCTGAAAGGTACCctacagctgattggttgcaagtgac
gtattgactgattttacgtcatttacaaccaatcagttgttgggtccgtg
atgtaatctcagaagacattgtaatggtgcatatcatggttTTTCATGct
ttgttaagttacgtaacttccgTCATTAACATTCGAATCTGTAAAAtgga
acgtttgcttccataatggcggaaattacgtaaacttaataaaacatgaa
aaccTCTTTATTCGAGCGCGCAAATACAGCGACTTCTGATATTTGCGACA
TCATTAAAACACTGGATACACTAGAATCCAATCTCTTTTCAAATTCATGC
AGTTTTTGACGAGGCGCACATACCATTGACTGTGCGcgcaattgaaaaaa
atatatatgaaaaataaactttatgCATATACTAAAATAAACAtgaataa
ataattttaaaaaatgttgaatgaaaatatgACTGACCCCTTTACCTCGT
GCGACCGATGAATATCAttgcttaaaggttttatttttacataagtgttc
ccgtttcatatcagacacatatttcatatcaggacagtgtctgtctattg
ttatattgtgctgatataaacaaaaagatgtttttcttttcctctttctg
accaatcttgctccacattcgtgtcaatccaaCTGAAAAAGCTTGTGGAT
GAGCaagttgatgagtaagcaaacgatatcactcttattaaaaaaaaacc
tttaaatttcatatcattgCCCATAGTGAAATCTAAATatcctttttgaa
aattaccaCAAGCCCATCTGAGGTCCCTTCCCACCAAAAAGTTATGTAAT
AAAGAAGGAAAAGGATAGTCTGCAGTGAGTGGGATTCTCTTCAAGTTAAC
TGGATTTACAAAGCGTTTCAACGTGCAGGAGTCGGTGATTTAGTGATGAA
TTGTAAATTGATTATTCTATCTAGGACAATGCACTGGAAATGCTTATTAA
GCAACGCTGCAAAAAGCTTGCAAAAGGCAACAAcatttaatcggattaat
tttcgggagaatagaaaaaaaagcgGGAAACTTAGTGCGCACCTcatgat
ttttagaaaatagaagctttttaagttttttgacgcaaattcgatttttt
cgctACTGCAAAAGCTTGGAAGGTTTAAAGTGACATCAAAATAATCGAAT
GTTtcagcccgaaaacctgggctccaaaagtcgcaaagtgggaTAGACGT
TAGAGCGTAGAAAAAAAGCCGTGGCATCTGGTATAGGCTAGGGGAACGTT
TTGAAAATTTCGCGTACATTTAATTTCACGAATCTGCTAAGAATTCTTGA
AAATTGCCTGAAAACcctatttcttttcaaaaatagcaaattcactggtt
aaaaaaaaacaaattcaaaatctctGCGAGTCAGTTATTAAACGTGATTT
CGCGAGATTTATTATCGCAAAAAAGCAATACCTCATTACACTTATATACC
TAAtcaaactaaagtctgtccagatataattggcagtggaaacaagaatg
cctgtaacttttaatagccaaatataattatggaatttttttttgcttgt
tttagaaaatcaagagcgctatatttcaatgtattttttgttgaaaaatt
cgcgattcttaacggttaaatttgcgattgcaaaaattgagcattttttc
tacttatgctataaccttcatttttacaccagtggtagttcaactttagg
ttaagaagtttgtaaaatttcaaggcaaacagaaaagtccttcggaagat
atgggacccgaaatcctccttggtagcacttttctgtgaaatatcaaatc
tccaacttattactaaaaacggggattgtgttatctttttttaacagtgc
aatcaaaagttggaaaatgttaagtgttggtgcattggtattattggtat
cattgattatttcgcaACGAAGatacagtataattgtttttattgaaaag
ataagcatgaacttatattgcctttgttatttttaagtcattaaagaact
ttgctaattcccaaaacactaaacactgtttggctatgaggtcattaaag
agatcgtaaaatgttttatgatcaaaaaactgttttatcaatcatatcac
tacccccgtttttagtaataagttggagatttgatatttcacagaaaagt
gctaccaaggggtatttcgggtcccatatcttccgaaggacttttctgtt
tgccttgaaatttaacaaactttttaacCTAAGGATGAACTActactggt
gtaaaaatgaacgttatagcataagtagaaaaaaaactcaatttttgcaa
tcgcaaatttaaccgctaaaaatcgcgaatttttcaaccaaaattacatt
gaaatatagcgctctagattctctaaaacaagcaaaaaaatttccataat
tatatttgactgtcaaaagttacaggcattcttgtttccactgccaatta
tatctggactgACTTTATTAACATGAATTTGTTATCTCATAAATACAATC
GTTTATTAACAAATTTGGGTCGAGGTAATTTTCGAAAACCCTGCCTTAAT
TAATTGTCGAACTATTTTTCCCTGCGTTAAATACTTGACTAGTTATAAAA
TGTGATAAGGTAATTCGTGAAAAACGCGAAATTACATCtcgtgaaaatta
atccgattactGTAGACGTTTAGTGCAAGCTGGGAAATAATCTAACTAAA
AGTATACCctctcaataaaaaaatgctttaACGTCCTCGTTTCCTGCGTA
TTATCACCTTTTTATGCTTATTGATAGCGACGGacagataatattctctg
gcgccTATCAGTAGCATAAATAAAGTCTGTTATACACGTGGAGGATTTGT
GATTTAACGTCTAAGCTGAAATTCAGTGATCTCATCTGGATCATCAGTCC
ATTGAGCTAATGGTACATTATCCTCGTGTAGTCTCCTGTACTTAGACGAT
TCCACAAAATTACGGTAACACGAGATAGTGCAACCCAGTATAACAATTAA
TACAAAGATACCACATATAGATAATAACGCAATGATAAGTGCAGGGTTCT
TCATGATCACAGAAAATAGATTTTTCTCTTGTACAATATGCTCAATGCGA
GCTAAGGACCCATTATTAAGGTGTGGCTCAATGTCTAGTACGTGACATAA
TAGAGCACAGATATCGATATTTTGAACTTcaccaatttttaaatttttct
tgaaagccGGACCACGTGCTATAAAGATCCCATGCATTTCCTTCATGTCG
TTATCGTAACCATGGTCCCCATGTGGGATCCAGGTCCCGTTGTTAAGCGC
AAAATAATAAGTTGGATCAGAAAGAGCGATAATTTCAGGTATACGTCTAT
TATTTTTGTAATGCCATCGTTCGGGGATGtcttttttataatatacattt
aaatgttcaattttcttcaGTGCTTTATATACTTCTTCTTTTTTACCTTC
AAGCGGTCGAACATGAAGTAGCACACCGTGACTATCAAGATGAAAATCGG
ACGTGTTGTTCAGGTAATCTGAAAGGTATTTGACGTTTTGGCGAGGGATC
GGTAGAAANN Run BLAST on NCBI protein sequence of TCONS_00022134-protein >TCONS_00022134-protein ID=TCONS_00022134-protein|Name=TCONS_00022134-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
FLPIPRQNVKYLSDYLNNTSDFHLDSHGVLLHVRPLEGKKEEVYKALKKI
EHLNVYYKKDIPERWHYKNNRRIPEIIALSDPTYYFALNNGTWIPHGDHG
YDNDMKEMHGIFIARGPAFKKNLKIGEVQNIDICALLCHVLDIEPHLNNG
SLARIEHIVQEKNLFSVIMKNPALIIALLSICGIFVLIVILGCTISCYRN
FVESSKYRRLHEDNVPLAQWTDDPDEITEFQLRR Run BLAST on NCBI transcript from alignment at sc0000405:182895..186654 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022134 ID=TCONS_00022134|Name=TCONS_00022134|organism=Clytia hemisphaerica|type=transcript|length=3760bp|location=Sequence derived from alignment at sc0000405:182895..186654 (Clytia hemisphaerica)
NNTTTCTACCGATCCCTCGCCAAAACGTCAAATACCTTTCAGATTACCTG
AACAACACGTCCGATTTTCATCTTGATAGTCACGGTGTGCTACTTCATGT
TCGACCGCTTGAAGGTAAAAAAGAAGAAGTATATAAAGCACtgaagaaaa
ttgaacatttaaatgtatattataaaaaagaCATCCCCGAACGATGGCAT
TACAAAAATAATAGACGTATACCTGAAATTATCGCTCTTTCTGATCCAAC
TTATTATTTTGCGCTTAACAACGGGACCTGGATCCCACATGGGGACCATG
GTTACGATAACGACATGAAGGAAATGCATGGGATCTTTATAGCACGTGGT
CCggctttcaagaaaaatttaaaaattggtgAAGTTCAAAATATCGATAT
CTGTGCTCTATTATGTCACGTACTAGACATTGAGCCACACCTTAATAATG
GGTCCTTAGCTCGCATTGAGCATATTGTACAAGAGAAAAATCTATTTTCT
GTGATCATGAAGAACCCTGCACTTATCATTGCGTTATTATCTATATGTGG
TATCTTTGTATTAATTGTTATACTGGGTTGCACTATCTCGTGTTACCGTA
ATTTTGTGGAATCGTCTAAGTACAGGAGACTACACGAGGATAATGTACCA
TTAGCTCAATGGACTGATGATCCAGATGAGATCACTGAATTTCAGCTTAG
ACGTTAAATCACAAATCCTCCACGTGTATAACAGACTTTATTTATGCTAC
TGATAggcgccagagaatattatctgtCCGTCGCTATCAATAAGCATAAA
AAGGTGATAATACGCAGGAAACGAGGACGTtaaagcatttttttattgag
agGGTATACTTTTAGTTAGATTATTTCCCAGCTTGCACTAAACGTCTACa
gtaatcggattaattttcacgaGATGTAATTTCGCGTTTTTCACGAATTA
CCTTATCACATTTTATAACTAGTCAAGTATTTAACGCAGGGAAAAATAGT
TCGACAATTAATTAAGGCAGGGTTTTCGAAAATTACCTCGACCCAAATTT
GTTAATAAACGATTGTATTTATGAGATAACAAATTCATGTTAATAAAGTc
agtccagatataattggcagtggaaacaagaatgcctgtaacttttgaca
gtcaaatataattatggaaatttttttgcttgttttagagaatctagagc
gctatatttcaatgtaattttggttgaaaaattcgcgatttttagcggtt
aaatttgcgattgcaaaaattgagttttttttctacttatgctataacgt
tcatttttacaccagtagTAGTTCATCCTTAGgttaaaaagtttgttaaa
tttcaaggcaaacagaaaagtccttcggaagatatgggacccgaaatacc
ccttggtagcacttttctgtgaaatatcaaatctccaacttattactaaa
aacgggggtagtgatatgattgataaaacagttttttgatcataaaacat
tttacgatctctttaatgacctcatagccaaacagtgtttagtgttttgg
gaattagcaaagttctttaatgacttaaaaataacaaaggcaatataagt
tcatgcttatcttttcaataaaaacaattatactgtatCTTCGTtgcgaa
ataatcaatgataccaataataccaatgcaccaacacttaacattttcca
acttttgattgcactgttaaaaaaagataacacaatccccgtttttagta
ataagttggagatttgatatttcacagaaaagtgctaccaaggaggattt
cgggtcccatatcttccgaaggacttttctgtttgccttgaaattttaca
aacttcttaacctaaagttgaactaccactggtgtaaaaatgaaggttat
agcataagtagaaaaaatgctcaatttttgcaatcgcaaatttaaccgtt
aagaatcgcgaatttttcaacaaaaaatacattgaaatatagcgctcttg
attttctaaaacaagcaaaaaaaaattccataattatatttggctattaa
aagttacaggcattcttgtttccactgccaattatatctggacagacttt
agtttgaTTAGGTATATAAGTGTAATGAGGTATTGCTTTTTTGCGATAAT
AAATCTCGCGAAATCACGTTTAATAACTGACTCGCagagattttgaattt
gtttttttttaaccagtgaatttgctatttttgaaaagaaataggGTTTT
CAGGCAATTTTCAAGAATTCTTAGCAGATTCGTGAAATTAAATGTACGCG
AAATTTTCAAAACGTTCCCCTAGCCTATACCAGATGCCACGGCTTTTTTT
CTACGCTCTAACGTCTAtcccactttgcgacttttggagcccaggttttc
gggctgaAACATTCGATTATTTTGATGTCACTTTAAACCTTCCAAGCTTT
TGCAGTagcgaaaaaatcgaatttgcgtcaaaaaacttaaaaagcttcta
ttttctaaaaatcatgAGGTGCGCACTAAGTTTCCcgcttttttttctat
tctcccgaaaattaatccgattaaatgTTGTTGCCTTTTGCAAGCTTTTT
GCAGCGTTGCTTAATAAGCATTTCCAGTGCATTGTCCTAGATAGAATAAT
CAATTTACAATTCATCACTAAATCACCGACTCCTGCACGTTGAAACGCTT
TGTAAATCCAGTTAACTTGAAGAGAATCCCACTCACTGCAGACTATCCTT
TTCCTTCTTTATTACATAACTTTTTGGTGGGAAGGGACCTCAGATGGGCT
TGtggtaattttcaaaaaggatATTTAGATTTCACTATGGGcaatgatat
gaaatttaaaggtttttttttaataagagtgatatcgtttgcttactcat
caacttGCTCATCCACAAGCTTTTTCAGttggattgacacgaatgtggag
caagattggtcagaaagaggaaaagaaaaacatctttttgtttatatcag
cacaatataacaatagacagacactgtcctgatatgaaatatgtgtctga
tatgaaacgggaacacttatgtaaaaataaaacctttaagcaaTGATATT
CATCGGTCGCACGAGGTAAAGGGGTCAGTcatattttcattcaacatttt
ttaaaattatttattcaTGTTTATTTTAGTATATGcataaagtttatttt
tcatatatatttttttcaattgcgCGCACAGTCAATGGTATGTGCGCCTC
GTCAAAAACTGCATGAATTTGAAAAGAGATTGGATTCTAGTGTATCCAGT
GTTTTAATGATGTCGCAAATATCAGAAGTCGCTGTATTTGCGCGCTCGAA
TAAAGAggttttcatgttttattaagtttacgtaatttccgccattatgg
aagcaaacgttccaTTTTACAGATTCGAATGTTAATGAcggaagttacgt
aacttaacaaagCATGAAAaaccatgatatgcaccattacaatgtcttct
gagattacatcacggacccaacaactgattggttgtaaatgacgtaaaat
cagtcaatacgtcacttgcaaccaatcagctgtagGGTACCTTTCAGGCA
TTGCAatggtacatatcatgaattcggACATTTGATATTTGTTGAACATG
TCCAGATCTTAGAGAGTTAGTACTATATTTAAGCTTATTATAATGTAATA
CCTTTCATCAATAAGATATAATCAAGTTAGGTAAATGTATTTCATCAAAT
GCAATGGCTA Coding sequence (CDS) from alignment at sc0000405:182895..186654 >TCONS_00022134 ID=TCONS_00022134|Name=TCONS_00022134|organism=Clytia hemisphaerica|type=CDS|length=705bp|location=Sequence derived from alignment at sc0000405:182895..186654 (Clytia hemisphaerica)
TTTCTACCGATCCCTCGCCAAAACGTCAAATACCTTTCAGATTACCTGAA
CAACACGTCCGATTTTCATCTTGATAGTCACGGTGTGCTACTTCATGTTC
GACCGCTTGAAGGTAAAAAAGAAGAAGTATATAAAGCACtgaagaaaatt
gaacatttaaatgtatattataaaaaagaCATCCCCGAACGATGGCATTA
CAAAAATAATAGACGTATACCTGAAATTATCGCTCTTTCTGATCCAACTT
ATTATTTTGCGCTTAACAACGGGACCTGGATCCCACATGGGGACCATGGT
TACGATAACGACATGAAGGAAATGCATGGGATCTTTATAGCACGTGGTCC
ggctttcaagaaaaatttaaaaattggtgAAGTTCAAAATATCGATATCT
GTGCTCTATTATGTCACGTACTAGACATTGAGCCACACCTTAATAATGGG
TCCTTAGCTCGCATTGAGCATATTGTACAAGAGAAAAATCTATTTTCTGT
GATCATGAAGAACCCTGCACTTATCATTGCGTTATTATCTATATGTGGTA
TCTTTGTATTAATTGTTATACTGGGTTGCACTATCTCGTGTTACCGTAAT
TTTGTGGAATCGTCTAAGTACAGGAGACTACACGAGGATAATGTACCATT
AGCTCAATGGACTGATGATCCAGATGAGATCACTGAATTTCAGCTTAGAC
GTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022134-exon-sc0000405-1491911889:182895..186654 | TCONS_00022134-exon-sc0000405-1491911889:182895..186654 | Clytia hemisphaerica | exon |
| TCONS_00022134-exon-sc0000405-1510915933:182895..186654 | TCONS_00022134-exon-sc0000405-1510915933:182895..186654 | Clytia hemisphaerica | exon |
| TCONS_00022134-exon-sc0000405-1575043694:182895..186654 | TCONS_00022134-exon-sc0000405-1575043694:182895..186654 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000405 | supercontig | sc0000405:182895..186654 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002591 | Phosphodiest/P_Trfase |
| IPR017849 | Alkaline_Pase-like_a/b/a |
| IPR017850 | Alkaline_phosphatase_core |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008152 | metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008152 |
metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
BLAST of TCONS_00022134 vs. Swiss-Prot (Human)
Match: ENPP5 (Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 OS=Homo sapiens GN=ENPP5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.395e-25 Identity = 56/128 (43.75%), Postives = 81/128 (63.28%), Query Frame = -3
Query: 3282 VRPLEGKKEEVYKALKKIE-HLNVYYKKDIPERWHYKNNRRIPEIIALSDPTYYFALNNGTWIPHGDHGYDNDMKEMHGIFIARGPAFKKNLKIGEVQNIDICALLCHVLDIEPHLNNGSLARIEHIV 3662
+ P EGK +EVY+AL +L VY K+D+PERWHYK N RI IIA++D ++ N G+HGYDN + +MH IF+A GPAF+KN + + D+ LLCH+L+I +NGS ++ ++
Sbjct: 272 ILPKEGKFDEVYEALTHAHPNLTVYKKEDVPERWHYKYNSRIQPIIAVADEGWHILQNKSDDFLLGNHGYDNALADMHPIFLAHGPAFRKNFSKEAMNSTDLYPLLCHLLNITAMPHNGSFWNVQDLL 399
The following BLAST results are available for this feature:
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