TCONS_00022147 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022147
Unique NameTCONS_00022147
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2613

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022147 ID=TCONS_00022147|Name=TCONS_00022147|organism=Clytia hemisphaerica|type=transcript|length=2613bp
cgaaaaaacattgcgtgaatgcgtgaatttgggaaaaaaatttgcgtgat
tgcgtcAATTGAAAGTCCGCCGGAGGGGGGCCTCTTTTACCAAAGGATTT
GAGGTCTTTACACCAAATACATCAAGCAACTATTGCAGCATAATGGATTT
GGTTGGTGATACCTAGGGCAATTAAGTTATATTTCTGAAGCTATTGCGCT
GGTCGATTgtattttgacgtcatttaacTCATGTAAACTTGAGCACACTG
ACCTTTATGTACCCTGGacaaagtttctcaatcccggtcaagcaaaatct
ttgatcggagtttgttttttgaaagtgCACTTCTCAATACAGAAGAAACC
GGCGcttttctcttgattatacccctgtctccttaaaagatgtgttctga
aactttctagggttacctagacaacaaacACACGTTTgatcttgattata
cccctatctcgtcagaacacatcattatttctagctaACTAATTTACACA
GAtcttatcagaacagatcaaaatttctagctacTGAAACATACTCCTAG
GACACATCGGTAAAAGGGTCGTCTCTCCGGCTGCTTTTGTCAATAGCGTT
GTAAATGTaccgagagcgctagatctactttccttGAATTTATAGTTTTG
AAGATGCAGCGCCGttaaactttaatttttaacactgcaatggcttcttt
gcgggtaccactgAAAATAACTCTGAGCAAAGATTGTGGATATGGTTTGG
TCCAaaataaagCTGTTGACTCTATAGCAATGTCATTTCAAGACGATATA
CTATCCACCCACAATGAGAAGCGAAAAAAGCACGGTGCACCACCATTGAA
ATGGTCCGACACATTGGAAAGGAAAGCTACAAAGTGGGCGCAACATTTGG
CCAAAATTGATCAGTTGAAGCATGAACAAAATGTGGAGGAAGGAGAAAAT
ATCGCCATGGCCGGAGGGAAAGATTTGACTGGTGAAGGCGCGACAACCAT
GTGGTATGACGAAATTAAAGATTACAATTTCAATAAGCAAGGTGGATTCA
ACTCAAAAACAGGTCACTTCACTCAGATTGTCTGGGTTGCAAGTAAACAA
ATCGGAGCTGGAATTGCAAAATCCAAATCTGGACGTACCTATGTCGTCGC
TAAATATCTACCAGCAGGGAATATGATGGGTAACTTTCCTGCCAATGTGA
AACCATTAGgaagtgcactttccaaagatCAAAACGCCAATGGCTCACCA
ATGACAATTGCAGATCCAAAACCAACTCAAAAGAAAAGAACTACAACAAG
CACACCGAACCGGCAAACTACCACGCAAGGACGCCCTGCCATCCCGTTGC
TGGCTATCATGTCTTTCATCGCTGGTTTAGCATCGTTCGCTCTTTACTTA
GCAGCTCTCGTTGGTACGCACTGGGAAAAGGGCGACGCATCAAACCATTT
AGGTTTATGGAAATGGTGCGATATCAATGAATGTATCGCAATACAAGATG
TACCACACGCATTACGAGCAACACAGAGTTTAAGTATCCTAGCAGCGGTT
GCTGTATTCTTAGCTCTTGTACTAACTGTTGGGAAAATGGTTTCGCCGAA
GATAAGATATTTAGTACCAGCTTCTGTTTTCGTCATGGGAGGTTTATTTG
GGATCGTATCAGCGGCTGTTTATACTGCAGAAGTTTCAGACTCTAGCCTG
GATTATGGATGGTCATATGCACTAGCCTGGGTTGGAGTCAGTTTTGCAGT
ACTTGCAAGTATATTGATGATAGCTTCTCGATAACGCTTGGTAATCAagg
gcctatttgtttcatcGCTATTTTTACTGCATTTACTACAACTGcactca
tttcaatttttttctgtccAAAttttaagcactttttgtaaataaatttg
CAAACTCCCTATCagtaaaaatagtaaaaacctCAACCTTCTGCAAGCAA
TTGCATCTGAAATCAGACTGGATGATGTTTTCTGGATGTTTTCTTAGCCA
GATTGCCAATTTTAAGCCAATAAAGTTAGAGGTGAAGAGCTGAAACTGTA
GCTTGCTCCACACACGGGTCTATATCTGAAATCAAAATAGCAGttatttt
cataatggcggaatAGTGGTCACACAGCCGTGAATAAACAATTGATTGAA
AGTtactttttaagatttaaagcaCAACCAGGGATCATCAAGGCAGACAA
CAAAACTTACAATATTTgctatcattttcaaagttttcatggaATTTCAA
GCACTTTTAGCAGATAGCATCTACAGCATTTGTAGTAAGTGAAACAAATA
GGCCCCAAATAAGACACCTGATCTCCCAAGAAGAAGAGCtcgaaaatatt
tcaatttcatgtTTCTCGGTCGTTAACTACAACTACTTCATTTATGCTGT
atagatttatttatttgtaacaaaaaatatgaactcgaaaaaaaaatcaa
tttggtTTTTGTATCACAAATGGACGTCTACATTCGTTGCCCCAaactcg
tacccagagccacttgtaCCACTTTTTAGTTTTACTGATGATGGACGTAA
TACAACCCTTTCGTGAGCGTAAATGCTAGCTAGCCATGCCTGGGGGTACT
AGCTTTGCGAGAT
Run BLAST on NCBI

transcript from alignment at sc0000406:22499..32563+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022147 ID=TCONS_00022147|Name=TCONS_00022147|organism=Clytia hemisphaerica|type=transcript|length=10065bp|location=Sequence derived from alignment at sc0000406:22499..32563+ (Clytia hemisphaerica)
cgaaaaaacattgcgtgaatgcgtgaatttgggaaaaaaatttgcgtgat
tgcgtcAATTGAAAGTCCGCCGGAGGGGGGCCTCTTTTACCAAAGGATTT
GAGGTCTTTACACCAAATACATCAAGCAACTATTGCAGCATAATGGATTT
GGTTGGTGATACCTAGGGCAATTAAGTTATATTTCTGAAGCTATTGCGCT
GGTCGATTgtattttgacgtcatttaacTCATGTAAACTTGAGCACACTG
ACCTTTATGTACCCTGGacaaagtttctcaatcccggtcaagcaaaatct
ttgatcggagtttgttttttgaaagtgCACTTCTCAATACAGAAGAAACC
GGCGcttttctcttgattatacccctgtctccttaaaagatgtgttctga
aactttctagggttacctagacaacaaacACACGTTTgatcttgattata
cccctatctcgtcagaacacatcattatttctagctaACTAATTTACACA
GAtcttatcagaacagatcaaaatttctagctacTGAAACATACTCCTAG
GACACATCGGTAAAAGGGTCGTCTCTCCGGCTGCTTTTGTCAATAGCGTT
GTAAATGTaccgagagcgctagatctactttccttGAATTTATAGTTTTG
AAGATGCAGCGCCGttaaactttaatttttaacactgcaatggcttcttt
gcgggtaccactgAAAATAACTCTGAGCAAAGATTGTGGATATGGTTTGG
TCCAaaataaaggtcagtgcttgAATCTCATCCTCATGCATGTAGTGTTA
GGATTAATTTCTGTATTCGTAGACATCATGTTATGGAAATTCACtttgct
gttaaagcgattcaTTTTTGTACACCATTTTAGCTGTTGACTCTATAGCA
ATGTCATTTCAAGACGATATACTATCCACCCACAATGAGAAGCGAAAAAA
GCACGGTGCACCACCATTGAAATGGTCCGACACATTGGAAAGGAAAGCTA
CAAAGTGGGCGCAACATTTGGCCAAAATTGATCAGTTGAAGCATGAACAA
AATGTGGAGGAAGGAGAAAATATCGCCATGGCCGGAGGTAATGCCTTTCA
AAATCtcgtttttttttgcactttttcaTCATAAAGCAAATTGTAACTTG
GAAGAatatttgagttttcaaaagtttttttcttcttttagtgCTTTTGC
ATCAAGAAGTCagtattaaaatttttgataaccAAGGCTCGTAAAATGGC
TATTTTACACGAGTTTTAGCGGCCGTAGTGCAAAGATAAGAGACCTTTAG
CATCTAGAACGGCGACTTGAACTAGGACGTGAGgtaaatcttaaaatcaa
atgGCGAATCTTTTATCTAGATTtaatcatggaggtataaagaaagacag
gagaagtatgctattgtaaccaagctcgccctacgattaaaaaagttacg
atgtatgcatgctcataatctcatataNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNttatttcatcgggcgagctta
gaatttcttttgatacattttataaaagaaatcaaaagaccaattaccga
cacattcaactcctgttttctttatacctctatgatttAATATGACATGG
ACAAATTTGAAATGTAGTCAAGTTTTTGTGATAAATGACGTTATAATTTT
CGAGGGATTCATGTCATTTAAAACTATTGTACTCTTCCTTTATCGTTATC
GTCCAAAATACGaggtcaaaaaagaattttcaatttgCTTTGAGATTTGA
AAACGTCGACTAATTACCCTATTATAAGTCACTATTCTCATGAGAGATTG
ATGTGAAAAGAATAGAATCTATAGTTGCAATCCAGATATCAATCCATAAG
GGCTTTCTATTTTGTTCAATTCTGCCTTACATTTTCAAAGTTGCCGTCCT
AGATGCTAAAGGTTCTTATAGAGCATTCGGCTACGGTGCACAATGTCGTG
GCTTCTATCCCTGGCCAAGTCATAACAAAGATTCTAAGATAGCCTCCAAA
ATGCCTCACTGCTTcaatgctcagcaattaagagaatgaTCGATAGTTAG
TGAAGCAATCTGAGGAAAAAGATTGGCGTCCGCCCCCACCCTCTGGTAGA
TGGTAGATAGCTCTCGAAAGGGGAGCCTTCGGCTGCGGTGGCAAACTTTA
GTACTCGATCTTATGGTTAACAAGCATCCTTTTACGTGTCATTTACAGGG
AAAGATTTGACTGGTGAAGGCGCGACAACCATGTGGTATGACGAAATTAA
AGATTACAATTTCAATAAGCAAGGTGGATTCAACTCAAAAACAGGTCACT
TCACTCAGGTTTGAATACTACTATCGTTAAATCTTCATTATTACTGCATA
CAATCTTGTTATCAAAACTCTCTCATTAAAAACTCTCCTATCATTTACAA
TATGCCccgaaaaaaagtgtacaaatttTTCTATGGAGTAATCATCAATT
ctttcaatcaatagatattcaattcccaagatgattAAAAAGGTTTTTGA
GAATGAAATATTAAGTATAAGAGTCATAAAAGTTGGCATAGattatgagg
attttacttgATATAAACATCTGTCCGCTTTTTTGGAACACACTGTACAT
ACACAGTTTTAAACAAAGgaaaaacaactttttaaaaatttatttgttta
atTATTCCGGAAAAATCTTCTTTAGATTGTCTGGGTTGCAAGTAAACAAA
TCGGAGCTGGAATTGCAAAATCCAAATCTGGACGTACCTATGTCGTCGCT
AAATATCTACCAGCAGGTAATATCATAACTCCTCTGTTTAAGTGACGTAA
TGCTTAAATTCCTTATGCTGAAATCTTTCAAGAAAATTCACATCTTTAGT
CGAATAACTGAAATTTTGTAGCTATTTACTTACTCTCCAGGTACACGCCA
CACGCCACATGCCATATGCTAGTTAAGATATTCAGAGTGTTACTGTTGTT
ATTGTTGTACTCTCTTATTCATTAAACCTGCTTAATACAGTAGCATGTAT
TGAAGTTGTCTGTACAAAGACAACTCGGTATCTACGACTAATTTCCAAAT
TAAATATCGTAGAGGGtatgttgtcattgtcttttctggttTGAGATTTC
TCAAACCGACCGCAGcaatggagtgttggtgagagaggagAGACGATGGC
agaagtaagtaagtaagtaatagtttatttcatgttgacgaaaaggtagc
aacaaaggctaataaaagtcaacgctactttacaattaaaaaaaactaat
gNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAACTAATGTTTTGTTGGCAGCTCATCGTCGCTGCTACTGAGGct
agatattgacagcttttggttggcaaagtttttgtttgtttttatcaagc
gAAGGTTATCTGTCTGGGACTTCCTCTCACACGCCAAATGAAATCACCAT
TACATTCGGAGTTCCATTTCTTAGCTTTTTCGCAcatctctttgattttt
cttctttcattgatgGTGAAATCATCAGTGATGCTTAGATGATTTCCAAG
CCACTTCAacttttttaaggctttaaggttgctcatgattctttcttttt
cttcttcactttgcaAGGTCACCTTTATCGGACGATTTTTCCTCGGCCCA
TTTTCATGTTCGAACCCAATACGATGTTGATGCGTTGGTTTGATGTCGCG
GATGTCGCGGATGCCGATATCTTTGAGCAGATcctcaatttcctttttgt
tCTTGATCTTCTTCTTTCGTTTCTTCAACTTGTTTAGGGAGTCCatgaat
tatgtttttttttcttgatttgatgTCTCGTTTTCTCTCCTCtcctcttc
tttttgttccgcgacaacagatttaagattttccttGTGTGCTTTGGCTA
TATCAGCGTAGGTTTTACGGGATGACtctttcataaaatcttttgtctgt
tgtatctcttcttttatcattttccttgttttggcTTCTAAGTCGGTCAT
CTTTAGTGTTAGGATTGTTTCgatatggcgcgccaaagcggaaataaata
ctatctctcaTTTCGCGAcaatatctttcatttcgcgacactatctttca
tttcgcgacactatcttttatttcgcgacactatctttcatttcgcgaca
ctatctttattAAAACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNccgcgaaatgaaagatagtgccgcga
aatgaaagatagtgccgcgaaatgaaagatagtgtcgcgaaatggaAGAT
AGTGTCGcaaaatgaaagatagtatttatttccgctttggcgcgccatag
ttTCGATGTCGTTGTTGATGACTTTGCGGTTTTTGGTCAgttcttttttg
agttttttgatttcGTTGTCTTTCTTAGCAATCTGTTCTTGCATCATATG
GTACTTGTTTTCTCCGATTTTACTTCTTAAGGATCTCGTTATTCGCACAC
AATTGTGACATACGTATTGATTATTATAAGTGTTAGCGAAGATTTACAGT
TGGTAAAGTGGCAATTGTGTGCACTCGTAATTTACCATACGTTGACAGCT
ACGGCATTTGAGTCGATTTTGATCTTCATCATCATCTCGTAGCCAGAGTC
ACTGGCAtaatctttttgattttactgatggactcAAAAATATCGAGATT
TGTAAAATGAACTTTGGCTGGATACCAACAGAGTGATCAAAAAATCGCGT
GCTGGGATGGAGATAGGCTACATCAATACACGTAACAAGGGTGCATGTTG
CAGTTGTGTTTGCTGCTTCAATCGGTGGGTCTTGGGTGTTTTTGTCGCGA
TTTTTATCATATTTAGCGaatttcgatgattttttgagtttccaccattt
ttttgaaagcgATGCAGAACACGTCTTAActaagtgacgtcaaaaagaag
TGCTGCTAtctataaatcatacttcatggCAGAGGTCTCCATACggcaaa
ttttttatcaaacagacaattgCGTACAGAGTAGTATTCAAGAGGCCTCT
TTGCTAAAAATTCGGCCTTAAAATCATGGATGAGTTTATTCTTCATTCAA
TATTCCAGTAAGCACTCACTTAACTAATATAGAGAACTTTTCCCTAGGGA
ATATGATGGGTAACTTTCCTGCCAATGTGAAACCATTAGgaagtgcactt
tccaaagatCAAAACGCCAATGGCTCACCAATGACAATTGCAGATCCAAA
ACCAACTCAAAAGAAAAGAACTACAACAAGCACACCGAACCGGCAAACTA
CCACGCAAGGTACCGTTACatttttaccttattacacaaatataactaaa
gtcattttattaacacgaattgaaaaatttcaaccccccccctcttaatt
aaaaccagccggtgtttccttgaaaaagcagaaaaattcgtgttaatttc
agatATCGTCCAAATTTCAAGGCTGTTGAATACTTggctagtaatattcg
tgtaataaggtataccGAGTTTTACCTTATAGAGAGATGAGTGCTCCGAG
CCACGTTAATGATAAAAGTTttattaatcgtggacattttGCCTGTGTTT
TCAAATATCTTGATCTTAAACGTCACTTTtcgaaaacattcgaaaatctt
tttttgttcaaatttctcACTTCAATGCAGCGATgcagcaattttttttc
ggacacttcggtgtgtttttcggacaaatatgacggtctcaggccaAAAT
CTtagggtcaaaatttaatgaaaattttagcttgacaAAAGagctgttgt
atatttttggaaagctctcaaaaaattaagagtagagatatattgcaaga
aTAGGTGATTtttgtacctaactcgagatattttacttcaaaaagtgcaa
aaagtggagcaaatagctgtttctggctgaaaaacactatttttaagGCT
CAATATCTTGAATTACCCGAAAAATTCAAGGCTCTGTTATAAAAAACGAA
GGATATCTCAGATTGTTTGCTGATTccgacaaaaataaacaatgtccact
taagggaacttattgcGGCgagtttttacaaaattctCCAAACTTTATCT
TCGCATTACAAAATTGCTGCCTTGTTAAAATTAAAGATTGACGTTTACTT
GCCAAAGAAAgttcttttcaaaatcaaattgtTTTACGATTTGTGCTCCT
TGCATGAATTAGTTCTCACCAAAAAGGTTTGCGCAGCGCAATGGGCCTTT
AAAACACAACTGGtcgaaaaaatttgacttttgcgCCTATGGGCGCAATT
ATCAATCAACGAttccaggctaaaatcgaactacctgactttctattgtg
cgcatgtgtaagaaaaaaccacatataattaatacctcttatggtcaaat
ctttctttcttcattagtagaaaaaagtttaaagtaaTTATAAACCTTTA
TTGCTCGCCCGACTCGAGTCAATACATTGAATTTGCTTTTGTGGTATGGC
GATTCTGCAGCGGAAAAATATGCTGACAGTGCCAACACTGCTGTGCCTTT
ACGCGGAGGGTCGGATAACGCCGCTTCTGTCTTTGTATAACCTTGACTTg
atcaaaaaaataacaattatcTTTCTTTCAGGACGCCCTGCCATCCCGTT
GCTGGCTATCATGTCTTTCATCGCTGGTTTAGCATCGTTCGCTCTTTACT
TAGCAGCTCTCGTTGGTACGCACTGGGAAAAGGGCGACGCATCAAACCAT
TTAGGTTTATGGAAATGGTGCGATATCAATGAATGTATCGCAATACAAGA
TGTACCACACGCATTACGAGCAACACAGAGTTTAAGTATCCTAGCAGCGG
TTGCTGTATTCTTAGCTCTTGTACTAACTGTTGGGAAAATGGTTTCGCCG
AAGATAAGATATTTAGTACCAGCTTCTGTTTTCGTCATGGGAGGTTTATT
TGGGATCGTATCAGCGGCTGTTTATACTGCAGAAGTTTCAGACTCTAGCC
TGGATTATGGATGGTCATATGCACTAGCCTGGGTTGGAGTCAGTTTTGCA
GTACTTGCAAGTATATTGATGATAGCTTCTCGATAACGCTTGGTAATCAa
gggcctatttgtttcatcGCTATTTTTACTGCATTTACTACAACTGcact
catttcaatttttttctgtccAAAttttaagcactttttgtaaataaatt
tgCAAACTCCCTATCagtaaaaatagtaaaaacctCAACCTTCTGCAAGC
AATTGCATCTGAAATCAGACTGGATGATGTTTTCTGGATGTTTTCTTAGC
CAGATTGCCAATTTTAAGCCAATAAAGTTAGAGGTGAAGAGCTGAAACTG
TAGCTTGCTCCACACACGGGTCTATATCTGAAATCAAAATAGCAGttatt
ttcataatggcggaatAGTGGTCACACAGCCGTGAATAAACAATTGATTG
AAAGTtactttttaagatttaaagcaCAACCAGGGATCATCAAGGCAGAC
AACAAAACTTACAATATTTgctatcattttcaaagttttcatggaATTTC
AAGCACTTTTAGCAGATAGCATCTACAGCATTTGTAGTAAGTGAAACAAA
TAGGCCCCAAATAAGACACCTGATCTCCCAAGAAGAAGAGCtcgaaaata
tttcaatttcatgtTTCTCGGTCGTTAACTACAACTACTTCATTTATGCT
GTatagatttatttatttgtaacaaaaaatatgaactcgaaaaaaaaatc
aatttggtTTTTGTATCACAAATGGACGTCTACATTCGTTGCCCCAaact
cgtacccagagccacttgtaCCACTTTTTAGTTTTACTGATGATGGACGT
AATACAACCCTTTCGTGAGCGTAAATGCTAGCTAGCCATGCCTGGGGGTA
CTAGCTTTGCGAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012421XLOC_012421Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022147-exon-sc0000406-1491911889:22499..23260TCONS_00022147-exon-sc0000406-1491911889:22499..23260Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1510915933:22499..23260TCONS_00022147-exon-sc0000406-1510915933:22499..23260Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1575043694:22499..23260TCONS_00022147-exon-sc0000406-1575043694:22499..23260Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1491911889:23382..23585TCONS_00022147-exon-sc0000406-1491911889:23382..23585Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1510915933:23382..23585TCONS_00022147-exon-sc0000406-1510915933:23382..23585Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1575043694:23382..23585TCONS_00022147-exon-sc0000406-1575043694:23382..23585Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1491911889:25747..25856TCONS_00022147-exon-sc0000406-1491911889:25747..25856Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1510915933:25747..25856TCONS_00022147-exon-sc0000406-1510915933:25747..25856Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1575043694:25747..25856TCONS_00022147-exon-sc0000406-1575043694:25747..25856Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1491911889:26224..26314TCONS_00022147-exon-sc0000406-1491911889:26224..26314Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1510915933:26224..26314TCONS_00022147-exon-sc0000406-1510915933:26224..26314Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1575043694:26224..26314TCONS_00022147-exon-sc0000406-1575043694:26224..26314Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1491911889:29796..29957TCONS_00022147-exon-sc0000406-1491911889:29796..29957Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1510915933:29796..29957TCONS_00022147-exon-sc0000406-1510915933:29796..29957Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1575043694:29796..29957TCONS_00022147-exon-sc0000406-1575043694:29796..29957Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1491911889:31280..32563TCONS_00022147-exon-sc0000406-1491911889:31280..32563Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1510915933:31280..32563TCONS_00022147-exon-sc0000406-1510915933:31280..32563Clytia hemisphaericaexon
TCONS_00022147-exon-sc0000406-1575043694:31280..32563TCONS_00022147-exon-sc0000406-1575043694:31280..32563Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000406supercontigsc0000406:22499..32563 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.122311	0.410334	0.298898	0.369289	0.972586	0.64146	0.784032	0.64616	0.214703	0.539193	0.35112	0.66124	0.69286	0.64988	0.136075	0.192185	0.0603147	0.210816	0.621372	0.777342	0.185161	0.237551	0.894408	0.566515	3.9251	0.721012	1.61282	0.453571	0.23998	0.291405
Blast
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BLAST of TCONS_00022147 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.129e-31
Identity = 67/150 (44.67%), Postives = 91/150 (60.67%), Query Frame = 3 
Query:  771 SIAMSFQDDILSTHNEKRKKHGAPPLKWSDTLERKATKWAQHLAKIDQLKHEQNVEEG---ENIAMAGGKDLTGEGATTMWYDEIKDYNFNKQGGFNSKTGHFTQIVWVASKQIGAGIAKSKSGRTYVVAKYLPAGNMM--GNFPANVKP 1205
            S +  F +++L  HNE R+KHG PPLK    L R+A ++++ LA    LKH      G   EN+A A   D TG+     WY EIK+YNF +Q GF S TGHFT +VW  +K++G G A +  G ++VVA+Y PAGN++  G F  NV P
Sbjct:    4 SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNF-QQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLP 151
The following BLAST results are available for this feature:
BLAST of TCONS_00022147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR11.129e-3144.67Golgi-associated plant pathogenesis-related protei... [more]
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