TCONS_00022198 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022198
Unique NameTCONS_00022198
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2306

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022198 ID=TCONS_00022198|Name=TCONS_00022198|organism=Clytia hemisphaerica|type=transcript|length=2306bp
GGGCGTATCATGGACAAAAATATCACGTTTCATCGAATGATTGCTTACAT
GATTTGTTTTGCAACAGCCTTACATTTGGGTGCACATATCTTCAACTTTG
AATATCTCATTGCAAGTAGAGATGCAACTACTGGCTTAACTAAATACttg
aatgatttcaaagatggCGAAGATAAAGACCGATTAAATCCCATAGAATC
TGCTGGATTGGATCCTGTTTTGGAGTTACTTCAAACTGTGGCTGGAATCA
CAGGAGTCATTATTACTATTTCTCTTATTACTATGgtATCTTCTTCAACC
GAGTTGATCAGacgttcatattttgaagtattttggtTCACCCATCATTT
GTTTGTTGTCTTTTTCATCGGAATGCTTTTCCATGGCTTCGGTGAACTTC
TACGATCCCAAAACAACACGTCTGAACACAATCCTGAATATTGTTCCCAA
GATGACCGATACAATACTGACTCAGAATGTCAGAAACCTCCACGATTCAG
TGCTGCAGGACCACAGTCTTGGAAATGGATTATTGCTCCGATGGGGTTGT
ACTTGATTGAACGTTGCATTCGATTCTACAGATCTTTCCAAACTTGCGAG
GTTAAAAAGGTTGTTAAGCATCCATCGAAAGTCATTGAAGTTCAAATGAG
GAAGCCTGGATTCAGAGCACAAGCTGGCCAGTACATCTTTTTACATTGTC
CAAGTATCTCACCTTTGGAATGGCATCCGTTTACTCTGACATCGTGTCCA
GAAGAAGATTTCTTTTCGGTCCATATTCGTATTGTTGGGGACTGGACTCA
GGCTTTGTCGAATTCTTGTGGTAATGACACTGATAACGTTGATGTCTCCA
AAATTCCAAGatTGGCATGTGATGGACCATTCGGAACTGCTAGTACTGAC
GTCTTCCGCCATGAAAATGTCATTTGTTGCGGAGCTGGTATTGGAGTCAC
GCCCTTCGCCTCCATTCTCAAATCCATCTGGTACCGTCAACAGAGAAAGG
ATACAACCCTGAGAATCAAGAAAGTTTATTTCTATTGGATTTGTCCAGAC
ACTAATGCTTTTGAATGGTTCTCTGATCTCCTCCAATCTCTTGAGCAACA
GaTGATGGAGAAAGGCGAGATGGGATTTTTGGAATATAATATTTATTTGA
CCAGAGGTTGGGGAAAGGGTGATGCACGCAACATTATTCTGCATGAAAAT
GATGAAGAGGACGTCATCACAGGtctcaaacaaaaaacaaatttcgGACG
TCCGAACTGGGATGAGATTTTCAGAACTACTGCTATTAAACATAAAGGAT
CTGATGTTGGTGTGTTCTTTTGTGGGCCAGCCATCCTTTCGCACACTTTA
CACGAGATGTCCAATAAGCATAGCAACGAAACGACCAAATTCTATTAtaa
caaggaaaatttctaagtGGGTTTAAATTGGATTGGATCATATATTATTG
GTTTATAATCAAGGATGGTTTTGTTGATATagaaactttttccaaaatat
tttttggtctTCGCGAGACTGAATCTCATACACTTGGAGAtgaaatatta
tcaaataatagCAAAAGCTTTTGAAATGGTTGTAAtcgttttaatttttg
attatcACATTGaaggaattttttgaatttcaatttcttcaattcaaaat
ttggtaaaaaacaAGGATTATGATTTTATCTTCAAAATGTTGAATTGTGA
ATCACCTAATTTTGAAAACCTTTTGCAAAGTAAAGAACAGTGCCAATAGA
ATAAAAGCCAACAGTAGAATAGATGTTTTACAGAAATTGTCCACTGCTTT
TTACGTAAACACCATACTGTCCAAGACCAGGGCCTAAAAACTTTGGTGAC
AGAGatttaccaaaaaatattttttgtataattataagaaatattaaata
tttattttttagcttATTATTTTTGTTCCTCACAATaaagcaaaaacatt
ttctgtttatATCAGCAGTTCAACATTCGAAACTGAATTTCAAGAGTATG
GGTGGGGCTTAGATAACGCCCCTAGATATATGAGACGCTTTTTTTCTATT
CGCTTTCAGTTTGAAAGTCGATTCAACTTGATCTTCACAgcaaaatttca
caaattttagCACATGTTTGATGAATTTTTCATCGTTTTTTTCTAGATTA
TGTAGCTTTTAATATgatgtaaatataaaaataatgtattttttttacca
aggataattattctttttgtatttttctggATAATGATTTATAtggtaat
tttttgttttgttttttttcggtcCATGTGTTTTTGCATTGAATATTTTA
TACAAA
Run BLAST on NCBI

transcript from alignment at sc0000408:122993..131903+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022198 ID=TCONS_00022198|Name=TCONS_00022198|organism=Clytia hemisphaerica|type=transcript|length=8911bp|location=Sequence derived from alignment at sc0000408:122993..131903+ (Clytia hemisphaerica)
GGGCGTATCATGGACAAAAATATCACGTTTCATCGAATGATTGCTTACAT
GATTTGTTTTGCAACAGGTAGGTCTTCCTTCAAGATATTTTTCTAGTTTA
ACTTGCATAATGAAGATCAGTTGTTAGTTGTTAGCTGGTGTTtgtctcaa
aatttcattcataCTCAATATAATTATTTGATATCAAGGAAGGAGTCTTC
CTTATTAAGGGAAAGGGTAGACAAATCTCATCTATCCAATCTTTTACATC
TTACCTCACCATATTCACCTTTTTCTTGTTATATTAGCCTTACATTTGGG
TGCACATATCTTCAACTTTGAATATCTCATTGCAAGTAGAGATGCAACTA
CTGGCTTAACTAAATACttgaatgatttcaaagatggCGAAGATAAAGAC
CGATTAAATCCCATAGAATCTGCTGGATTGGTAGGTCAAAActcttattt
tcttatttttttgaccGAGTTGGTTTTAGTTCTTTGTTATATGAATCTGC
CTTCCTGTGCTCAAaccagaagaagaaaaattttaaagaattattATTGT
TCTCTTATGATAATCACATTAAATTTATTGATGTACAAGTAAAACAAAGT
TTTCAACTTTCTCAACataaattttgttgtttacATGATGTATACATGTg
tattatttcttattttagGATCCTGTTTTGGAGTTACTTCAAACTGTGGC
TGGAATCACAGGAGTCATTATTACTATTTCTCTTATTACTATGGTAAGAG
AACATCATATTGATGAAGAATTGATGAAAGTAGAGGGCTATGTGTAATTT
TTTCTTGCACCTTGTAGCAGATGTGATGGGACCATAAAACACATAACTTG
GTTAAAGTTTACCGGTTAGGATTGATGTCAAAATTCTCTCAAGTCTGTGA
TAAAATTAATACAACGACTTCAGACATTTGACAGCAATCCTACATGGTAA
TCTCTCTAACCCAGTTTTCTCAGGTTTTTATCATACTACTTCAACCCTGA
GATCTCTGGCATCTTGCAAAGGGTAAAAAGCAAAGTTGTTTCGAATCTGA
TATAGAATAGTCTAGTACATAAACAAATTCTATATTACAAATTATTCGGA
CTTCAAAACtcacaaaacaaattttaaagcaAGCTATAAAtcctttcaat
ttcatttttaggtATCTTCTTCAACCGAGTTGATNCCGAGTTGGTTTTAG
TTCTTTGTTATATGAATCTGCCTTCCTGTGCTCAAaccagaagaagaaaa
attttaaagaattattATTGTTCTCTTATGATAATCACATTAAATTTATT
GATGTACAAGTAAAACAAAGTTTTCAACTTTCTCAACataaattttgttg
tttacATGATGTATACATGTgtattatttcttattttagGATCCTGTTTT
GGAGTTACTTCAAACTGTGGCTGGAATCACAGGAGTCATTATTACTATTT
CTCTTATTACTATGGTAAGAGAACATCATATTGATGAAGAATTGATGAAA
GTAGAGGGCTATGTGTAATTTTTTCTTGCACCTTGTAGCAGATGTGATGG
GACCATAAAACACATAACTTGGTTAAAGTTTACCGGTTAGGATTGATGTC
AAAATTCTCTCAAGTCTGTGATAAAATTAATACAACGACTTCAGACATTT
GACAGCAATCCTACATGGTAATCTCTCTAACCCAGTTTTCTCAGGTTTTT
ATCATACTACTTCAACCCTGAGATCTCTGGCATCTTGCAAAGGGTAAAAA
GCAAAGTTGTTTCGAATCTGATATAGAATAGTCTAGTACATAAACAAATT
CTATATTACAAATTATTCGGACTTCAAAACtcacaaaacaaattttaaag
caAGCTATAAAtcctttcaatttcatttttaggtATCTTCTTCAACCGAG
TTGATCAGGTATATATTAGGAATTTCCATTTTCGAGTGACTTAAAAGTTT
CTTTGAGAATTTATTGTGCAGTTTCTTGAGTAAAAAATTCCACCTCATCG
CCTCCCTCCAGGATGTCTGACAGCATGTGAAAACTAACCATTTATGATGG
ATAATTCTCTTATGATATTTAtctgacatttttttattttttagacgttc
atattttgaagtattttggtTCACCCATCATTTGTTTGTTGTCTTTTTCA
TCGGAATGCTTTTCCATGGCTTCGGGTGAGTTGATATTCTCAGAAGGAGT
GATTTCAGACTAGTCATTCATATATAAAACACTGCATAAAGCTTCTCCTT
CCCTGGCCGAGGCAAAACGTGCAGTGAGTGAGTCATTGCAGTGTCAAAAT
GCTTCAACTAACCCCACTACCTTTTTaaagaaacatttttatgaGAACAC
CAGGTCAAACTTGATTAAACCTACGAATAATCAGAATCTCATTACGACAC
AACAAAAAATTGATATCATTATGAACAAATTGCACCCTTTTAGTGAACTT
CTACGATCCCAAAACAACACGTCTGAACACAATCCTGAATATTGTTCCCA
AGATGACCGATACAATACTGACTCAGAATGTCAGAAACCTCCACGATTCA
GTGCTGCAGGACCACAGGTGAGagattttgaatcttttttttgacacttt
ttcaatacctttttgttttcttggctGGGATGATCTTATCTTGATCTTAG
CATGGGTCGCTATAGTCCTACCAATACAGGACCAAAATTATGACATTTCT
GGGTTAAAATAGTAGGCGTATTCAGAAATTCTCTATCCTGTGATATTCTA
AGTATGAGGGGTCATTAATTCCACTTAACCGACCTGAAGGTAGGTATCTC
TATCCAAGATGGCAACTTATCATCCAGTAGAATATGTAACAGATTTCAGG
GAATAGAATACTagatatgaaatatttttcaatcgttaTAGTCTTGGAAA
TGGATTATTGCTCCGATGGGGTTGTACTTGATTGAACGTTGCATTCGATT
CTACAGATCTTTCCAAACTTGCGAGGTTAAAAAGGTAAATACTCTTTATT
GGTGAAATTGAGTTTATCAAACCTTATACATATTTTCTTTTATTGCTACT
GTATATTGCCTTTATTTACCATGCAACTCATTGCAATAAATCCACCAAGT
GAATGTTAAAAAGAAATTGTCATGTTGTACATTTGTTAAATTATATCATT
CTTTAGGTTGTTAAGCATCCATCGAAAGTCATTGAAGTTCAAATGAGGAA
GCCTGGATTCAGAGCACAAGCTGGCCAGGTAGGTCGCTATTCAGAATATG
CACCACTGCAGTGTCTTAAGAGATTTTTACAATGTTTTTACCCAATACGT
CATTTTAAACCAATCATATTTCGTAAAAGTGACGTGTTgcgtggaaaatt
ttgaaatttttaggaagacattgcagtggtgcatatcctGAACTGTTGCA
CATGGTCTGTGTTTGCTGCAGTCACTGTTGAAAAGTCTGCATGGAAAAGT
GTCTTATTTGTTATTATGCTCGTCCTCCAACGAAAAAGTTTCTTCTAGAA
ATTTAGGTTTATATAGGAAGTatgaccatgttcgcacgtgacggttctGT
TTCGCTTCAAAACGATatttctattggttacatttcagtgttacgtcact
tctaaccaatagaatggcttcatttcgtttcggagcgaaacagaACCGTC
ATGTGCGAACATGAtctatatctatagaggtcttcGAACCAGACTACTTT
GCGATGCACTCGCAAGGAAAAGGAGTGCAtctgtttgtttgaaaatgtca
aaataggACAAACTTTGGTAATGAACTTGAAATCGTTGTAGATATCGGGA
CTTTTACAGGGACACACATTATCATCTTTCAAGGCTGATTTAGTATAAGG
aatttatataaaatatttgaGTGATTTTGATATGAAGGAACATGACATAA
ACGCTTGTTGCAATAAATGCAAAATTCTAATTGAGTTTTTCTCTGCATAA
ATAGAATGAATGTCACCTCACTTTATAACTGTTTATTTTCTATAGTAAGT
GAGTCACACTTTGACAGTGAGGCATTCTTGCATCCTACTGCGAAGTCTAG
TATAATTTTAATAGATGCTTATCACACTGTGGTTAGAAATCGTTCACATT
TTTCTAATCTTCTGCCACAGGCACAGAGTGTAAGCACAATTAATCTTTAA
AGACTATATATGTTACATACGGTGCATACTGTtatgacacattctcttta
taaGCAGCCCCCAAATTTTGGGCTAAGGctgaagttatttttcattccTT
AAATTCCATTCCTTCTCCTGATATTACACTTGGatcaagggctatcgttt
gccttcacgaaaaagtaaaaaaaaaattggctgatTTAAGGGGTCGAGAT
GGGATCCTTGTGTAatcatgatttttgtttttcttatattgCAGTACATC
TTTTTACATTGTCCAAGTATCTCACCTTTGGAATGGCATCCGTTTACTCT
GACATCGGTGAGtattaaatatttaaaagatAACATTTTAATCTAAACTC
TTCGAATAATAACGTCATGGCCTAGCAGGAGgttaattgtatttttgtaN
CCTAAACTCTTCGAATAGTAACGTCATGGCCTAGCAGGAGgttaattgta
tttttgtaagTTACGTAAATTTGCTTATATACTTTACActatttcatcaa
aaattacaaaacttcATACATTATAACTAATATGGGGAACTGAAtttgtt
ttccatttttatGTTTCACCATGTTTTCACCATTTAGATCCAACTGGAAC
CTTTAAAAAGGCCTGGGAGAATATTCTGTTTCTAGAATGTCGttttctta
aatattttttttcaaattcaagccaAACGTCTGTTTAAGATGATTTTCTC
AGGGGATTCCTCAAATTGTCCTTGAGAGAATTGCAATTGTTTGAAAATCG
TATTATCGTTAAAGGGGAATTGTTTTGGTTATAATTCTTTAGAGGTTATT
GTTTgggaaaattaacaaaaacaaataaaaagtgTTATAATATCGTTCCT
GTTCGTTATAGTGTCCAGAAGAAGATTTCTTTTCGGTCCATATTCGTATT
GTTGGGGACTGGACTCGTAAGTCATTATCGCCTGCTATGTTCTATTTTTA
TCATCCATGGCTTGAAAAATAAAGTTTGCGTCAAAATGACAATGACTTAG
CTCATTATTTAGTTTGATTTTCTCACGAGAAGTTGTAAGTCTAATGGTTA
ATGTTACAAAAGGATGTTTTAGACCAACTTCTATTTATCCTTTTTAAAAC
TGTTTCCTAATACCCAACATATAAACATTTATCATTCGATTTCCAAACAG
AGGCTTTGTCGAATTCTTGTGGTAATGACACTGATAACGTTGATGTCTCC
AAAATTCCAAGGTAAACGAAACAACTTCTCCTTGATGGTAACTCTGCTCC
CTTACTGTAATCACTACCTATATACTTTATTTATTCGAAATTAGAAATGT
CGTCTATCTGTTAGTTGGATTATAATTAGATGTTAGATCTGGAAAAGATA
AATGATTATGCTTTGTAGTTTTTGacgcttttttttcttttttacttttt
ttcagatTGGCATGTGATGGACCATTCGGAACTGCTAGTACTGTAAGTGT
TACATTAATTGTGTAGTAGTGTAATGGGTATCGATCTTGACTGCCGTCCA
GGAGGGTGGATTTCGATCGACACTTGGTGCTGTAATTCACCTGGAAAAGA
ATGTACCTTTTCccaggtcaacccataccatgagAGGGAAATCGGGTAGA
CAAAAACTCAAGAAGCCTATCGGTGACTGTGCTAGACATCGATTCCGTAA
TACATTCTGGATGGCCACTCTTCTTGCTCCCTGGTGGTTCACGCCCAAAC
TGTGGGCCAATATCGCTAAAGCCATAGAGCCTAGAATGCTCTGTTCACAA
CTGGGCATCTATAATTACAAAAAAGGTCCACGAACTAAGAGCAACAGAAG
GCCCAAAATCAACAAATCATAGATATGAATACTCAAAgctataaatatat
aaatatgtTTAGAAAATTGATTTCACCGATTTTTCTTTGTAGGACGTCTT
CCGCCATGAAAATGTCATTTGTTGCGGAGCTGGTATTGGAGTCACGCCCT
TCGCCTCCATTCTCAAATCCATCTGGTAAGATATTCAAAATTCTAAACTT
GTTTCTAGTACAAATTGATTCGATGTTAAGAAGCAAAGTGATTGATTATG
AGGCCTCATTCCAAACTTCCTTCTTTAGTGTTTCGTTCCTTTAGATAGTG
GGTCAAGCTGCCCATAAAACCTCGCAATATAGTTGATCATCTAAAAtccc
tttattatttttttcactgaGTTGATATTGGAAAATAACAACTCTACAAG
CTTGTTTAAGACTCTCTCTTCTGTTAAAGTTCTTGCTCTTCTTTAAAGGT
ACCGTCAACAGAGAAAGGATACAACCCTGAGAATCAAGAAAGTTTATTTC
TATTGGATTTGTCCAGACNTACCGTCAACAGAGAAAGGATACCACCCTGA
GAATCAAGAAAGTTTATTTCTATTGGATTTGTCCAGACACTAATGCTTTT
GAATGGTTCTCTGATCTCCTCCAATCTCTTGAGCAACAGGTTTGTATTCT
AAACATATTTTCCATTCACGATAGCTATTAATAAAACGGCTCTGTTCTTT
AATAAAAAGTTGAGGATAAAAAGAACTGAGTAGTTGTGATACTCAAACAA
GACTTATTTCGGTTTCCTTCGCCTAGTATAATTAGATGAACTCTCCATTC
CGACTCAACCTACAAGCCACCGCGCCGATTTAAAAAAACCTTGAAGAGAA
TTGTGTAGTCATTTCTGATTTTTGTCGAAAGCAACATTTACTTCATTTAT
GGTTTGGAATTTTCGGAATAAGgaataattcaattttattttttgtttat
tagaTGATGGAGAAAGGCGAGATGGGATTTTTGGAATATAATATTTATTT
GACCAGAGGTTGGGGAAAGGGTGATGTGAGTATTTTTTTGATCCTTTTGA
AGAGCGTCCGTATCAATCTGTCTTGCGTCATTGTATCTCGATCTCTTCCA
CAACTCGAACGATTATTTGAAACAGAAACTGTGCAATATATATATTTCAT
CTTTCTTTGCAGGCACGCAACATTATTCTGCATGAAAATGATGAAGAGGA
CGTCATCACAGGtctcaaacaaaaaacaaatttcgGACGTCCGAACTGGG
ATGAGATTTTCAGAACTACTGCTATTAAACATAAAGGGTAAGATATTGCA
TCAAGATCAGGCCCTTAGAACATTCTTTAGACTTTTGCTAAACATATTTC
TGACANTATCAAGATCAGGCCCTTAGAATAGTCTTTAGACTTTTGCTAAA
CATATTTCTGACACCTGAGTTTACTGCAGCATGGTGTAGTAGGAATTGTG
TTTTGGGCCTTTCCAGAAAAGATTGTCTTGGGTTTTTGAGGACCTCAATT
TAtggaaaatatttagatttGTGATTTGACAGGTATATAGGAGTTTTTAT
TCTTTCTTCTTACGCTTGCTTCATTCTCGAGAATGGtttcaattttaaaa
tgttCAATATTCCGTCATATTGATCGATGAACTTTTTGACCTCCTCGACC
AGGATCATTCATGAGCTTTGGCGAATGATTCTCTCGACCTCCACAAAAAC
GACCTTATCTTCGACTAATCCCTCTGAATATTCAGACTTTTTATCATGTG
TTTACTCCCTGGATGTCTGCAATATCATCAAGACCCCCAtactttttttg
gggggggagCCTAATTGTTCTTCCAAATATGAAATAGGCTTAATATTTGG
ATAATCTTTTCGATAAtacaagaaaaattaaactGGGTTTGATTAATCTt
tggaaaaagtgtttaaaattAAGACTGAACTTTTGTTCATCTCTGGTTTC
TAGATCTGATGTTGGTGTGTTCTTTTGTGGGCCAGCCATCCTTTCGCACA
CTTTACACGAGATGTCCAATAAGCATAGCAACGAAACGACCAAATTCTAT
TAtaacaaggaaaatttctaagtGGGTTTAAATTGGATTGGATCATATAT
TATTGGTTTATAATCAAGGATGGTTTTGTTGATATagaaactttttccaa
aatattttttggtctTCGCGAGACTGAATCTCATACACTTGGAGAtgaaa
tattatcaaataatagCAAAAGCTTTTGAAATGGTTGTAAtcgttttaat
ttttgattatcACATTGaaggaattttttgaatttcaatttcttcaattc
aaaatttggtaaaaaacaAGGATTATGATTTTATCTTCAAAATGTTGAAT
TGTGAATCACCTAATTTTGAAAACCTTTTGCAAAGTAAAGAACAGTGCCA
ATAGAATAAAAGCCAACAGTAGAATAGATGTTTTACAGAAATTGTCCACT
GCTTTTTACGTAAACACCATACTGTCCAAGACCAGGGCCTAAAAACTTTG
GTGACAGAGatttaccaaaaaatattttttgtataattataagaaatatt
aaatatttattttttagcttATTATTTTTGTTCCTCACAATaaagcaaaa
acattttctgtttatATCAGCAGTTCAACATTCGAAACTGAATTTCAAGA
GTATGGGTGGGGCTTAGATAACGCCCCTAGATATATGAGACGCTTTTTTT
CTATTCGCTTTCAGTTTGAAAGTCGATTCAACTTGATCTTCACAgcaaaa
tttcacaaattttagCACATGTTTGATGAATTTTTCATCGTTTTTTTCTA
GATTATGTAGCTTTTAATATgatgtaaatataaaaataatgtattttttt
taccaaggataattattctttttgtatttttctggATAATGATTTATAtg
gtaattttttgttttgttttttttcggtcCATGTGTTTTTGCATTGAATA
TTTTATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012450XLOC_012450Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022198-exon-sc0000408-1491911889:122993..123059TCONS_00022198-exon-sc0000408-1491911889:122993..123059Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:122993..123059TCONS_00022198-exon-sc0000408-1510915933:122993..123059Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:122993..123059TCONS_00022198-exon-sc0000408-1575043694:122993..123059Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:123280..123422TCONS_00022198-exon-sc0000408-1491911889:123280..123422Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:123280..123422TCONS_00022198-exon-sc0000408-1510915933:123280..123422Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:123280..123422TCONS_00022198-exon-sc0000408-1575043694:123280..123422Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:124382..124456TCONS_00022198-exon-sc0000408-1491911889:124382..124456Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:124382..124456TCONS_00022198-exon-sc0000408-1510915933:124382..124456Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:124382..124456TCONS_00022198-exon-sc0000408-1575043694:124382..124456Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:124875..124900TCONS_00022198-exon-sc0000408-1491911889:124875..124900Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:124875..124900TCONS_00022198-exon-sc0000408-1510915933:124875..124900Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:124875..124900TCONS_00022198-exon-sc0000408-1575043694:124875..124900Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:125087..125167TCONS_00022198-exon-sc0000408-1491911889:125087..125167Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:125087..125167TCONS_00022198-exon-sc0000408-1510915933:125087..125167Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:125087..125167TCONS_00022198-exon-sc0000408-1575043694:125087..125167Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:125436..125559TCONS_00022198-exon-sc0000408-1491911889:125436..125559Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:125436..125559TCONS_00022198-exon-sc0000408-1510915933:125436..125559Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:125436..125559TCONS_00022198-exon-sc0000408-1575043694:125436..125559Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:125884..125976TCONS_00022198-exon-sc0000408-1491911889:125884..125976Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:125884..125976TCONS_00022198-exon-sc0000408-1510915933:125884..125976Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:125884..125976TCONS_00022198-exon-sc0000408-1575043694:125884..125976Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:126149..126220TCONS_00022198-exon-sc0000408-1491911889:126149..126220Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:126149..126220TCONS_00022198-exon-sc0000408-1510915933:126149..126220Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:126149..126220TCONS_00022198-exon-sc0000408-1575043694:126149..126220Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:127387..127449TCONS_00022198-exon-sc0000408-1491911889:127387..127449Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:127387..127449TCONS_00022198-exon-sc0000408-1510915933:127387..127449Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:127387..127449TCONS_00022198-exon-sc0000408-1575043694:127387..127449Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:128004..128058TCONS_00022198-exon-sc0000408-1491911889:128004..128058Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:128004..128058TCONS_00022198-exon-sc0000408-1510915933:128004..128058Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:128004..128058TCONS_00022198-exon-sc0000408-1575043694:128004..128058Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:128293..128353TCONS_00022198-exon-sc0000408-1491911889:128293..128353Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:128293..128353TCONS_00022198-exon-sc0000408-1510915933:128293..128353Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:128293..128353TCONS_00022198-exon-sc0000408-1575043694:128293..128353Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:128548..128584TCONS_00022198-exon-sc0000408-1491911889:128548..128584Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:128548..128584TCONS_00022198-exon-sc0000408-1510915933:128548..128584Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:128548..128584TCONS_00022198-exon-sc0000408-1575043694:128548..128584Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:129035..129117TCONS_00022198-exon-sc0000408-1491911889:129035..129117Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:129035..129117TCONS_00022198-exon-sc0000408-1510915933:129035..129117Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:129035..129117TCONS_00022198-exon-sc0000408-1575043694:129035..129117Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:129391..129460TCONS_00022198-exon-sc0000408-1491911889:129391..129460Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:129391..129460TCONS_00022198-exon-sc0000408-1510915933:129391..129460Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:129391..129460TCONS_00022198-exon-sc0000408-1575043694:129391..129460Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:129531..129581TCONS_00022198-exon-sc0000408-1491911889:129531..129581Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:129531..129581TCONS_00022198-exon-sc0000408-1510915933:129531..129581Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:129531..129581TCONS_00022198-exon-sc0000408-1575043694:129531..129581Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:129896..129967TCONS_00022198-exon-sc0000408-1491911889:129896..129967Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:129896..129967TCONS_00022198-exon-sc0000408-1510915933:129896..129967Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:129896..129967TCONS_00022198-exon-sc0000408-1575043694:129896..129967Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:130105..130229TCONS_00022198-exon-sc0000408-1491911889:130105..130229Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:130105..130229TCONS_00022198-exon-sc0000408-1510915933:130105..130229Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:130105..130229TCONS_00022198-exon-sc0000408-1575043694:130105..130229Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1491911889:130896..131903TCONS_00022198-exon-sc0000408-1491911889:130896..131903Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1510915933:130896..131903TCONS_00022198-exon-sc0000408-1510915933:130896..131903Clytia hemisphaericaexon
TCONS_00022198-exon-sc0000408-1575043694:130896..131903TCONS_00022198-exon-sc0000408-1575043694:130896..131903Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:122993..131903 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.68728	7.71582	33.4193	38.278	2.6232	2.6646	6.56128	6.63736	12.9597	14.927	23.1985	11.4831	28.7416	26.8322	10.0702	12.6738	23.0309	27.2497	28.133	26.4514	26.239	28.6959	12.4256	15.0573	27.9453	25.2664	24.2297	21.3918	25.3435	15.3939
Blast
[Close]
BLAST of TCONS_00022198 vs. Swiss-Prot (Human)
Match: CY24B (Cytochrome b-245 heavy chain OS=Homo sapiens GN=CYBB PE=1 SV=2)

HSP 1 Score: 483.797 bits (1244), Expect = 2.386e-161
Identity = 244/484 (50.41%), Postives = 324/484 (66.94%), Query Frame = 1 
Query:    4 RIMDKNITFHRMIAYMICFATALHLGAHIFNFEYLIASR-DATTGLTKYLNDFKDGEDKDRLNPIES------AGLDPVLELLQXXXXXXXXXXXXSLITMVSSSTELIRRSYFEVFWFTHHLFVVFFIGMLFHGFGELLRSQNNTS--EHNPEYCSQD-DRYNTDSECQKPPRFSAAGPQSWKWIIAPMGLYLIERCIRFYRSFQTCEVKKVVKHPSKVIEVQMRKPGFRAQAGQYIFLHCPSISPLEWHPFTLTSCPEEDFFSVHIRIVGDWTQALSNSCGNDTDNV-DVSKIPRLACDGPFGTASTDVFRHENVICCGAGIGVTPFASILKSIWYRQQRKDTTLRIKKVYFYWICPDTNAFEWFSDLLQSLEQQMMEKGEMGFLEYNIYLTRGWGKGDARNIILHENDEEDVITGLKQKTNFGRPNWDEIFRTTAIKHKGSDVGVFFCGPAILSHTLHEMSNKHSNETTK---FYYNKENF 1413
            R +D+N+TFH+M+A+MI   +A+H  AH+FN E+ + +R + +   +  L++  D +++  LN           GL   + LL  + G+   +    LI +++SST+ IRRSYFEVFW+THHLFV+FFIG+  HG   ++R Q   S   HN   C Q    +    EC   P+F+   P +WKWI+ PM LYL ER +RF+RS Q   + KVV HP K IE+QM+K GF+ + GQYIF+ CP +S LEWHPFTLTS PEEDFFS+HIRIVGDWT+ L N+CG D     D  K+P++A DGPFGTAS DVF +E V+  GAGIGVTPFASILKS+WY+     T L++KK+YFYW+C DT+AFEWF+DLLQ LE QM E+   GFL YNIYLT GW +  A +  +H ++E+DVITGLKQKT +GRPNWD  F+T A +H  + +GVF CGP  L+ TL + S  +S    +   F +NKENF
Sbjct:   92 RQLDRNLTFHKMVAWMIALHSAIHTIAHLFNVEWCVNARVNNSDPYSVALSELGDRQNESYLNFARKRIKNPEGGLYLAVTLLAGITGVVITL---CLILIITSSTKTIRRSYFEVFWYTHHLFVIFFIGLAIHGAERIVRGQTAESLAVHNITVCEQKISEWGKIKEC-PIPQFAGNPPMTWKWIVGPMFLYLCERLVRFWRSQQKVVITKVVTHPFKTIELQMKKKGFKMEVGQYIFVKCPKVSKLEWHPFTLTSAPEEDFFSIHIRIVGDWTEGLFNACGCDKQEFQDAWKLPKIAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQMQERNNAGFLSYNIYLT-GWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVHFIFNKENF 570
The following BLAST results are available for this feature:
BLAST of TCONS_00022198 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CY24B2.386e-16150.41Cytochrome b-245 heavy chain OS=Homo sapiens GN=CY... [more]
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