TCONS_00022211 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022211
Unique NameTCONS_00022211
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1552

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022211 ID=TCONS_00022211|Name=TCONS_00022211|organism=Clytia hemisphaerica|type=transcript|length=1552bp
acaaatttgattattttattaaaattttgctgacatcagtttcagacgag
ttgggtgtatataacaccgtataattcctttaaaCAGAAGATACTGATGG
TTTCCCTATCATAGTTGTCTGACATTATTTTGGTTTCAATTTATTTTAAG
GCAatagttatttaaaaaatggtGAAACTCCATGTCAAAAAAGGtgatca
aagtcaatttctctaTGAAACAACAGTAGAGGAAAATATTGGAGAATTGA
TAAACAAATTGGTTGAGATTTTCAATGGCCGGTTGAAAATTGACCGACTT
TTCTATGAACTGGAGACACTGGCGAAACATGGTACAACATTACCACCCAA
TATGCAAGGGTTAACAGATGACCAAATAGAGGAGTTACACTTAGAAGACA
AATGGTCAAAAACCTGTATTCCTCAGGGAGGAGACTGTAAATCAGCTGTG
GATCCCGTGGGTAGGAGAAATGGAAAAGCACCTTGTGATAAAATGGCTGA
GCTTCTTCATCGGACGCGAGAAGAAGCAAGAACAACGGTCTCTAAGGACT
TAGTAACAGCCAACAAGTGTTTGACAGAGAAAGATGTTCAAGAGGCAATT
GACAAGATGAGAGGAAGTGTCATGATCGTTTATCCAATGGGATTGCCTCC
CCATGATCCAATCAAAATGGAGTTTGATAATGAAGAAGATCTCACCGGAA
CACAAGCTTCTAAAGAAGTGCTAGACGAAGCCAATACGTCAATATGGTGG
GCAAGCAAAGAAATGACTAATGATAAAAAACTGAAAGATTACATCggtaa
aaatgagaaaactaaAATCATTGTTAAACTACAAAAGAAAGGGCAAGGAG
CACCTCAACGTGAACCAGCTGTCTCAGAGGACGAACAAAAAAGAATGATG
GCGTATTATCACAAGCGACAAGAAGATTTAAAGaaacttGAAACGGAGGA
CAGCGATGCATATTTAAATTCAGCATGGTCTGATCCTAGTCAACTCAAAA
GACAATTTCAAGGATTGAATAGTGTGTCTTGGAGACCAAAGTAATATCAC
ACAATAATTTCAAGTCGACTTTGATTCGTCAATTCATTTATGGACTCAGC
TTGCATAGCAAAGCATTGGTCATATGTCACTGAACCTCAGGAGAGCATGT
CAATCAAGGATATAATCATGAACAGTCAAACTATTTTTTGGAGGATTTAC
GTGAGTTTTCCATGTAATTTTTactctaatttttttggtctgtaaatttt
taCCATAAATTATAGTTTGTAAATAACCATTCTGTAACTCAAGCACATAG
CAATATATATAAGATTTCaaagttttatgaaaagaaTTCCAAACCTTCAT
ATAGGAAGGTAAAGTAGATATGAGCATTGTCTTTCAATTTTTGGATAAAT
ATTTGAGCCTTTAGCGGAGGTGGTCGAGGGGAGACTGACCATTAACTTAT
AATGCTTTCTTTGAATTTGAGTTGAAGAGATTCTAACCAGAGGTAATGGC
AAGTTAACAACTATTTGTGCTACTCATTAACTGGCTGTGTAAGAAATAGG
GC
Run BLAST on NCBI

protein sequence of TCONS_00022211-protein

>TCONS_00022211-protein ID=TCONS_00022211-protein|Name=TCONS_00022211-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MVKLHVKKGDQSQFLYETTVEENIGELINKLVEIFNGRLKIDRLFYELET
LAKHGTTLPPNMQGLTDDQIEELHLEDKWSKTCIPQGGDCKSAVDPVGRR
NGKAPCDKMAELLHRTREEARTTVSKDLVTANKCLTEKDVQEAIDKMRGS
VMIVYPMGLPPHDPIKMEFDNEEDLTGTQASKEVLDEANTSIWWASKEMT
NDKKLKDYIGKNEKTKIIVKLQKKGQGAPQREPAVSEDEQKRMMAYYHKR
QEDLKKLETEDSDAYLNSAWSDPSQLKRQFQGLNSVSWRPK
Run BLAST on NCBI

transcript from alignment at sc0000408:168385..171900+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022211 ID=TCONS_00022211|Name=TCONS_00022211|organism=Clytia hemisphaerica|type=transcript|length=3516bp|location=Sequence derived from alignment at sc0000408:168385..171900+ (Clytia hemisphaerica)
acaaatttgattattttattaaaattttgctgacatcagtttcagacgag
ttgggtgtatataacaccgtataattcctttaaaCAGAAGATACTGATGG
TTTCCCTATCATAGTTGTCTGACATTATTTTGGTTTCAATTTATTTTAAG
GCAatagttatttaaaaaatggtGAAACTCCATGTCAAAAAAGGtgatca
aagtcaatttctctaTGAAACAACAGTAGAGGAAAATATTGGAGAATTGA
TAAACAAATTGGTTGAGATTTTCAATGGCCGGTTGAAAATTGACCGACTT
TTCTATGGtaagttttcattttccataGTCTCACTAAGGACAAAGCAAGA
ATAAAAAGTCTCTCTATGAATAATGTTACAAAAACTGCCTCAGGTTAATT
TTTATCTCTTAAATAAGGATAATTTGTTAGAGGTCTGGTCACCACTCAAC
CGACAAGCTTAAAACAACCTAGTACCCCCTATTCCCCCAGGTTCATTCAG
TTCTTGATTTTTAAGATCAAGCTACTTACATTTTACTTTTCAGAACTGGA
GACACTGGCGAAACATGGTACAACATTACCACCCAATATGCAAGGGTTAA
CAGATGACCAAATAGAGGAGTTACACTTAGAAGACAAATGGTCAAAAACC
TGTATTCCTCAGGGAGGAGACTGTAAATCAGCTGTGGATCCCGTGGGTAG
GAGAAATGGAAAAGCACCTTGTGATAAAATGGCTGAGCTTCTTCATCGGA
CGCGAGAAGAAGCAAGAACAACGGTCTCTAAGGTTCGtgttatctttaaa
aaaagactTCTCCAGTCCATACGTAACTTTTAAGGTTGGTAGGATAAATg
tataaaagttttgaaattaaaaaaacatatgACTTTATTGGTCATCTATA
CTATAACATGGAAATTCCTTGCTCTACTGGGCgactttgtttttattctt
cAATTACCATACCTGGATTTCATCTTCGTTTGTCCATACTCTGTTGACTG
CCTGCTTTTATAGATTAGTTTTGTAGGACTGTCTCGATTACTTCGTATCA
AAAACCTTTCCATCCCTTTAAGGACTTAGTAACAGCCAACAAGTGTTTGA
CAGAGAAAGATGTTCAAGAGGCAATTGACAAGATGAGAGGAAGTGTCATG
ATCGTTTATCCAATGGGATTGCCTCCCCATGATCCAATCAAAATGGAGTT
TGATAATGAAGAAGATCTCACCGGAACACAAGTTGGTATTCTTTAGCACT
GGATATTTCTgcattatttatttctatacTGTGAATCGAGCAGGGAAAGC
TGACCCAAAGAAGTATCTTTTACTTTCATGTTCTTTAAGGGTTTTAAGGC
TACATCCTAAGCCCTTTGAAAACTTTTCCTGACAATCATGTATGGATTTG
TAATGATAGTTTGCCCAGTGACTCCTTGATTGGTCAAACAAACCCAAAAT
AAACCTTTATGTTAAATTCATTACAGTTAAAATCGCACAATGTAAACAGA
TCAAGAAATAGATATTCAAGGGATATTCTTTGCACTGAATGTAACTTAAG
TCATTATATCTAATTTAATACATCCTCCTACGGTACAATTTTTTAGGCTT
CTAAAGAAGTGCTAGACGAAGCCAATACGTCAATATGGTGGGCAAGCAAA
GAAATGACTAATGATAAAAAACTGAAAGATTACATCggtaaaaatgagaa
aactaaAATCATTGTTAAACTACAAAAGGTTAGTGTCCATTTTGTCGATA
AAATGCACTCTATTGCAATTTTCAAATGGGTATTGGGTATAGGAGTGTAT
TGATTAGTGCATAGTGGAAAGCCTAGTTAATCCGATAAACGCGTAGTGAA
TGTCGAGTTATAGAGCCGGGAAAGAAAATGTAAGTGTAACTCGATTACGG
TGGATGCGAAATAAGTACACATGCTGATGCTAAGTTCTTTGGAAGTAACT
TTCCATTTGTTCCCTTTTGAggaagaaaattatgaaattctaATTCAAAC
ACCGAATACAAtgagaattttcaaataaaggtcaatgtaacaacaaaaga
aaatgtcttGGTAGCCCACATTTCACACAGTGGTCAGCATTGAACCACAA
ACTATTGGTATAAAACCCTGTATTGTCATTTTCTATCTTTCGTTTACCAG
AAAGGGCAAGGAGCACCTCAACGTGAACCAGCTGTCTCAGAGGACGAACA
AAAAAGAATGATGGCGTATTATCACAAGCGACAAGAAGATTTAAAGGTAA
AACTTGTTCGTGGATTTTCGCCCTTTAAATGTGTAATAAAATGAATAAGA
TATTGCCTTTCAACAATGTGTGAGCCTCTTTTCGACACAAACCAGCTATT
TGTAACTCTTTCACCTTCACTTATATGGAGGAGAAGACATCTCTGGAGAT
TGGTCCCATCGAGTCCTGTAGATCTATCAATGacagatttttaatttttt
gacatattgaatctgatttctaaaataaaatgtaCTTTAATGGTGTTTGT
ACTGCCAGCTTATTGCATTTGTTTGCAATgttacaatttttcaaagttca
tGCAACGAAAATCCTTCCAATAGACGATACAAATGAATACGTGTctgcaa
gtgtctgcccctatatcaggctcgcattatgcttagcattctattgttct
caaacaatagagccattgtttaggtaccaaaaactgacccttatatgctt
ataaacgttatgcttatagaaaGAAAACATGTATTCGATTTCTGTCTTCT
AAGTTGATAGGATTTTGGTTAAATGACCgactaaataaaaaatctgattt
tttcgTCAAGATTCAAACTAGATTGCGACACTGGTCATGTGAATAATCTA
CTCAGCAGGTTCGAATGTATTTTCATTCCATTtgctttttatttcagaaa
cttGAAACGGAGGACAGCGATGCATATTTAAATTCAGCATGGTCTGATCC
TAGTCAACTCAAAAGACAATTTCAAGGATTGAATAGTGTGTCTTGGAGAC
CAAAGTAATATCACACAATAATTTCAAGTCGACTTTGATTCGTCAATTCA
TTTATGGACTCAGCTTGCATAGCAAAGCATTGGTCATATGTCACTGAACC
TCAGGAGAGCATGTCAATCAAGGATATAATCATGAACAGTCAAACTATTT
TTTGGAGGATTTACGTGAGTTTTCCATGTAATTTTTactctaattttttt
ggtctgtaaatttttaCCATAAATTATAGTTTGTAAATAACCATTCTGTA
ACTCAAGCACATAGCAATATATATAAGATTTCaaagttttatgaaaagaa
TTCCAAACCTTCATATAGGAAGGTAAAGTAGATATGAGCATTGTCTTTCA
ATTTTTGGATAAATATTTGAGCCTTTAGCGGAGGTGGTCGAGGGGAGACT
GACCATTAACTTATAATGCTTTCTTTGAATTTGAGTTGAAGAGATTCTAA
CCAGAGGTAATGGCAAGTTAACAACTATTTGTGCTACTCATTAACTGGCT
GTGTAAGAAATAGGGC

Coding sequence (CDS) from alignment at sc0000408:168385..171900+

>TCONS_00022211 ID=TCONS_00022211|Name=TCONS_00022211|organism=Clytia hemisphaerica|type=CDS|length=5256bp|location=Sequence derived from alignment at sc0000408:168385..171900+ (Clytia hemisphaerica)
atggtGAAACTCCATGTCAAAAAAGGtgatcaaagtcaatttctctaTGA
AACAACAGTAGAGGAAAATATTGGAGAATTGATAAACAAATTGGTTGAGA
TTTTCAATGGCCGGTTGAAAATTGACCGACTTTTCTATGAACTGGAGACA
CTGGCGAAACATGGTACAACATTACCACCCAATATGCAAGGGTTAACAGA
TGACCAAATAGAGGAGTTACACTTAGAAGACAAATGGTCAAAAACCTGTA
TTCCTCAGGGAGGAGACTGTAAATCAGCTGTGGATCCCGTGGGTAGGAGA
AATGGAAAAGCACCTTGTGATAAAATGGCTGAGCTTCTTCATCGGACGCG
AGAAGAAGCAAGAACAACGGTCTCTAAGGACTTAGTAACAGCCAACAAGT
GTTTGACAGAGAAAGATGTTCAAGAGGCAATTGACAAGATGAGAGGAAGT
GTCATGATCGTTTATCCAATGGGATTGCCTCCCCATGATCCAATCAAAAT
GGAGTTTGATAATGAAGAAGATCTCACCGGAACACAAGCTTCTAAAGAAG
TGCTAGACGAAGCCAATACGTCAATATGGTGGGCAAGCAAAGAAATGACT
AATGATAAAAAACTGAAAGATTACATCggtaaaaatgagaaaactaaAAT
CATTGTTAAACTACAAAAGAAAGGGCAAGGAGCACCTCAACGTGAACCAG
CTGTCTCAGAGGACGAACAAAAAAGAATGATGGCGTATTATCACAAGCGA
CAAGAAGATTTAAAGaaacttGAAACGGAGGACAGCGATGCATATTTAAA
TTCAGCATGGTCTGATCCTAGTCAACTCAAAAGACAATTTCAAGGATTGA
ATAGTGTGTCTTGGAGACCAAAGTAAatggtGAAACTCCATGTCAAAAAA
GGtgatcaaagtcaatttctctaTGAAACAACAGTAGAGGAAAATATTGG
AGAATTGATAAACAAATTGGTTGAGATTTTCAATGGCCGGTTGAAAATTG
ACCGACTTTTCTATGAACTGGAGACACTGGCGAAACATGGTACAACATTA
CCACCCAATATGCAAGGGTTAACAGATGACCAAATAGAGGAGTTACACTT
AGAAGACAAATGGTCAAAAACCTGTATTCCTCAGGGAGGAGACTGTAAAT
CAGCTGTGGATCCCGTGGGTAGGAGAAATGGAAAAGCACCTTGTGATAAA
ATGGCTGAGCTTCTTCATCGGACGCGAGAAGAAGCAAGAACAACGGTCTC
TAAGGACTTAGTAACAGCCAACAAGTGTTTGACAGAGAAAGATGTTCAAG
AGGCAATTGACAAGATGAGAGGAAGTGTCATGATCGTTTATCCAATGGGA
TTGCCTCCCCATGATCCAATCAAAATGGAGTTTGATAATGAAGAAGATCT
CACCGGAACACAAGCTTCTAAAGAAGTGCTAGACGAAGCCAATACGTCAA
TATGGTGGGCAAGCAAAGAAATGACTAATGATAAAAAACTGAAAGATTAC
ATCggtaaaaatgagaaaactaaAATCATTGTTAAACTACAAAAGAAAGG
GCAAGGAGCACCTCAACGTGAACCAGCTGTCTCAGAGGACGAACAAAAAA
GAATGATGGCGTATTATCACAAGCGACAAGAAGATTTAAAGaaacttGAA
ACGGAGGACAGCGATGCATATTTAAATTCAGCATGGTCTGATCCTAGTCA
ACTCAAAAGACAATTTCAAGGATTGAATAGTGTGTCTTGGAGACCAAAGT
AAatggtGAAACTCCATGTCAAAAAAGGtgatcaaagtcaatttctctaT
GAAACAACAGTAGAGGAAAATATTGGAGAATTGATAAACAAATTGGTTGA
GATTTTCAATGGCCGGTTGAAAATTGACCGACTTTTCTATGAACTGGAGA
CACTGGCGAAACATGGTACAACATTACCACCCAATATGCAAGGGTTAACA
GATGACCAAATAGAGGAGTTACACTTAGAAGACAAATGGTCAAAAACCTG
TATTCCTCAGGGAGGAGACTGTAAATCAGCTGTGGATCCCGTGGGTAGGA
GAAATGGAAAAGCACCTTGTGATAAAATGGCTGAGCTTCTTCATCGGACG
CGAGAAGAAGCAAGAACAACGGTCTCTAAGGACTTAGTAACAGCCAACAA
GTGTTTGACAGAGAAAGATGTTCAAGAGGCAATTGACAAGATGAGAGGAA
GTGTCATGATCGTTTATCCAATGGGATTGCCTCCCCATGATCCAATCAAA
ATGGAGTTTGATAATGAAGAAGATCTCACCGGAACACAAGCTTCTAAAGA
AGTGCTAGACGAAGCCAATACGTCAATATGGTGGGCAAGCAAAGAAATGA
CTAATGATAAAAAACTGAAAGATTACATCggtaaaaatgagaaaactaaA
ATCATTGTTAAACTACAAAAGAAAGGGCAAGGAGCACCTCAACGTGAACC
AGCTGTCTCAGAGGACGAACAAAAAAGAATGATGGCGTATTATCACAAGC
GACAAGAAGATTTAAAGaaacttGAAACGGAGGACAGCGATGCATATTTA
AATTCAGCATGGTCTGATCCTAGTCAACTCAAAAGACAATTTCAAGGATT
GAATAGTGTGTCTTGGAGACCAAAGTAAatggtGAAACTCCATGTCAAAA
AAGGtgatcaaagtcaatttctctaTGAAACAACAGTAGAGGAAAATATT
GGAGAATTGATAAACAAATTGGTTGAGATTTTCAATGGCCGGTTGAAAAT
TGACCGACTTTTCTATGAACTGGAGACACTGGCGAAACATGGTACAACAT
TACCACCCAATATGCAAGGGTTAACAGATGACCAAATAGAGGAGTTACAC
TTAGAAGACAAATGGTCAAAAACCTGTATTCCTCAGGGAGGAGACTGTAA
ATCAGCTGTGGATCCCGTGGGTAGGAGAAATGGAAAAGCACCTTGTGATA
AAATGGCTGAGCTTCTTCATCGGACGCGAGAAGAAGCAAGAACAACGGTC
TCTAAGGACTTAGTAACAGCCAACAAGTGTTTGACAGAGAAAGATGTTCA
AGAGGCAATTGACAAGATGAGAGGAAGTGTCATGATCGTTTATCCAATGG
GATTGCCTCCCCATGATCCAATCAAAATGGAGTTTGATAATGAAGAAGAT
CTCACCGGAACACAAGCTTCTAAAGAAGTGCTAGACGAAGCCAATACGTC
AATATGGTGGGCAAGCAAAGAAATGACTAATGATAAAAAACTGAAAGATT
ACATCggtaaaaatgagaaaactaaAATCATTGTTAAACTACAAAAGAAA
GGGCAAGGAGCACCTCAACGTGAACCAGCTGTCTCAGAGGACGAACAAAA
AAGAATGATGGCGTATTATCACAAGCGACAAGAAGATTTAAAGaaacttG
AAACGGAGGACAGCGATGCATATTTAAATTCAGCATGGTCTGATCCTAGT
CAACTCAAAAGACAATTTCAAGGATTGAATAGTGTGTCTTGGAGACCAAA
GTAAatggtGAAACTCCATGTCAAAAAAGGtgatcaaagtcaatttctct
aTGAAACAACAGTAGAGGAAAATATTGGAGAATTGATAAACAAATTGGTT
GAGATTTTCAATGGCCGGTTGAAAATTGACCGACTTTTCTATGAACTGGA
GACACTGGCGAAACATGGTACAACATTACCACCCAATATGCAAGGGTTAA
CAGATGACCAAATAGAGGAGTTACACTTAGAAGACAAATGGTCAAAAACC
TGTATTCCTCAGGGAGGAGACTGTAAATCAGCTGTGGATCCCGTGGGTAG
GAGAAATGGAAAAGCACCTTGTGATAAAATGGCTGAGCTTCTTCATCGGA
CGCGAGAAGAAGCAAGAACAACGGTCTCTAAGGACTTAGTAACAGCCAAC
AAGTGTTTGACAGAGAAAGATGTTCAAGAGGCAATTGACAAGATGAGAGG
AAGTGTCATGATCGTTTATCCAATGGGATTGCCTCCCCATGATCCAATCA
AAATGGAGTTTGATAATGAAGAAGATCTCACCGGAACACAAGCTTCTAAA
GAAGTGCTAGACGAAGCCAATACGTCAATATGGTGGGCAAGCAAAGAAAT
GACTAATGATAAAAAACTGAAAGATTACATCggtaaaaatgagaaaacta
aAATCATTGTTAAACTACAAAAGAAAGGGCAAGGAGCACCTCAACGTGAA
CCAGCTGTCTCAGAGGACGAACAAAAAAGAATGATGGCGTATTATCACAA
GCGACAAGAAGATTTAAAGaaacttGAAACGGAGGACAGCGATGCATATT
TAAATTCAGCATGGTCTGATCCTAGTCAACTCAAAAGACAATTTCAAGGA
TTGAATAGTGTGTCTTGGAGACCAAAGTAAatggtGAAACTCCATGTCAA
AAAAGGtgatcaaagtcaatttctctaTGAAACAACAGTAGAGGAAAATA
TTGGAGAATTGATAAACAAATTGGTTGAGATTTTCAATGGCCGGTTGAAA
ATTGACCGACTTTTCTATGAACTGGAGACACTGGCGAAACATGGTACAAC
ATTACCACCCAATATGCAAGGGTTAACAGATGACCAAATAGAGGAGTTAC
ACTTAGAAGACAAATGGTCAAAAACCTGTATTCCTCAGGGAGGAGACTGT
AAATCAGCTGTGGATCCCGTGGGTAGGAGAAATGGAAAAGCACCTTGTGA
TAAAATGGCTGAGCTTCTTCATCGGACGCGAGAAGAAGCAAGAACAACGG
TCTCTAAGGACTTAGTAACAGCCAACAAGTGTTTGACAGAGAAAGATGTT
CAAGAGGCAATTGACAAGATGAGAGGAAGTGTCATGATCGTTTATCCAAT
GGGATTGCCTCCCCATGATCCAATCAAAATGGAGTTTGATAATGAAGAAG
ATCTCACCGGAACACAAGCTTCTAAAGAAGTGCTAGACGAAGCCAATACG
TCAATATGGTGGGCAAGCAAAGAAATGACTAATGATAAAAAACTGAAAGA
TTACATCggtaaaaatgagaaaactaaAATCATTGTTAAACTACAAAAGA
AAGGGCAAGGAGCACCTCAACGTGAACCAGCTGTCTCAGAGGACGAACAA
AAAAGAATGATGGCGTATTATCACAAGCGACAAGAAGATTTAAAGaaact
tGAAACGGAGGACAGCGATGCATATTTAAATTCAGCATGGTCTGATCCTA
GTCAACTCAAAAGACAATTTCAAGGATTGAATAGTGTGTCTTGGAGACCA
AAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012454XLOC_012454Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022211-proteinTCONS_00022211-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022211-exon-sc0000408-1491911889:168385..168691TCONS_00022211-exon-sc0000408-1491911889:168385..168691Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1510915933:168385..168691TCONS_00022211-exon-sc0000408-1510915933:168385..168691Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1575043694:168385..168691TCONS_00022211-exon-sc0000408-1575043694:168385..168691Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1491911889:168928..169166TCONS_00022211-exon-sc0000408-1491911889:168928..169166Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1510915933:168928..169166TCONS_00022211-exon-sc0000408-1510915933:168928..169166Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1575043694:168928..169166TCONS_00022211-exon-sc0000408-1575043694:168928..169166Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1491911889:169457..169615TCONS_00022211-exon-sc0000408-1491911889:169457..169615Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1510915933:169457..169615TCONS_00022211-exon-sc0000408-1510915933:169457..169615Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1575043694:169457..169615TCONS_00022211-exon-sc0000408-1575043694:169457..169615Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1491911889:169981..170112TCONS_00022211-exon-sc0000408-1491911889:169981..170112Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1510915933:169981..170112TCONS_00022211-exon-sc0000408-1510915933:169981..170112Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1575043694:169981..170112TCONS_00022211-exon-sc0000408-1575043694:169981..170112Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1491911889:170535..170630TCONS_00022211-exon-sc0000408-1491911889:170535..170630Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1510915933:170535..170630TCONS_00022211-exon-sc0000408-1510915933:170535..170630Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1575043694:170535..170630TCONS_00022211-exon-sc0000408-1575043694:170535..170630Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1491911889:171282..171900TCONS_00022211-exon-sc0000408-1491911889:171282..171900Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1510915933:171282..171900TCONS_00022211-exon-sc0000408-1510915933:171282..171900Clytia hemisphaericaexon
TCONS_00022211-exon-sc0000408-1575043694:171282..171900TCONS_00022211-exon-sc0000408-1575043694:171282..171900Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:168385..171900 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.0896	41.9639	47.4679	47.0837	92.0537	69.0825	54.33	56.183	35.4029	40.6713	27.754	29.7505	8.17922	8.84909	14.6103	16.5806	24.3468	24.9605	11.5135	11.284	18.3897	19.9046	27.563	24.6181	50.5988	48.5754	24.4865	23.6972	14.5723	13.9507
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR021298DUF2870
Blast
[Close]
BLAST of TCONS_00022211 vs. Swiss-Prot (Human)
Match: CU059 (UPF0769 protein C21orf59 OS=Homo sapiens GN=C21orf59 PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.224e-121
Identity = 165/291 (56.70%), Postives = 221/291 (75.95%), Query Frame = 1 
Query:  169 MVKLHVKKGDQSQFLYETTVEENIGELINKLVEIFNGRLKIDRLFYELETLAKHGTTLPPNMQGLTDDQIEELHLEDKWSKTCIPQGGDCKSAVDPVGRRNGKAPCDKMAELLHRTREEARTTVSKDLVTANKCLTEKDVQEAIDKMRGSVMIVYPMGLPPHDPIKMEFDNEEDLTGTQASKEVLDEANTSIWWASKEMTNDKKLKDYIGKNEKTKIIVKLQKKGQGAPQREPAVSEDEQKRMMAYYHKRQEDLKKLETEDSDAYLNSAWSDPSQLKRQFQGLNSVSWRPK 1041
            MV LHVK+GD+SQFL +      + EL  ++  ++NGRLK+ RL  E+E LA+HG  LPPNMQGLTDDQIEEL L+D+W + C+P GG      D +GRRNG+AP +KM ++L +T EEA+  +SK  V A  C+T + V++A+D++RG+VMIVYPMGLPP+DPI+MEF+N+EDL+GTQA   V+ EA   +WWA+KE+   KKL DY+GKNEKTKII K+Q++GQGAP REP +S +EQK++M YYH+RQE+LK+LE  D DAYLNS W+D + LKR F G+  + WRP+
Sbjct:    1 MVLLHVKRGDESQFLLQAPGSTELEELTVQVARVYNGRLKVQRLCSEMEELAEHGIFLPPNMQGLTDDQIEELKLKDEWGEKCVPSGGAVFKK-DDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDDDAYLNSPWADNTALKRHFHGVKDIKWRPR 290
The following BLAST results are available for this feature:
BLAST of TCONS_00022211 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CU0591.224e-12156.70UPF0769 protein C21orf59 OS=Homo sapiens GN=C21orf... [more]
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