TCONS_00022217 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022217
Unique NameTCONS_00022217
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3839

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022217 ID=TCONS_00022217|Name=TCONS_00022217|organism=Clytia hemisphaerica|type=transcript|length=3839bp
GCTATCCAGTCTTCAGTTAATAGCTTCACAACAATTTAACTGCAAGTTAA
ACAGTTCAAAAAGACGACACAAGACGAACACGAGACTAACTCCAAAAAGG
CAAGGTTGTATAATTCAACAACACAGAATTCATCTAACCAACTCATAACA
AATTCAACTACCACAACAGCAGCAAGAAAAATGAATGTTCCAGACGAGCT
CACCGCTACAGAATACTTGAATCAGCTATTGCAAGACAAAACTACTGTCT
CAAAAATGCCGAAGATCTTTTTGCATTCTGAAAGACTTCTAGATGAAGaa
attagTCGTGTACGAAATGACATATTTTGCCCGTCAAGCTTCTTGATGTC
ACTGCCAAAACCCTCTGGACCTCCTGTGAAGTTAACTGAAAAAGTTTATG
CAAAAGTCAAAGATCACCCTAAATTCAACTTTGTTGGTCGTATTATTGGT
CCACGTGGTCTCACCTTACGTCAAGTTGAGCAAGAAACAGGAGGGAAGCT
TCTTGTTAGAGGAAGAGGTTCAATGAAAGACAAGAAAGTGGAGGAAGAAA
AACGTGGACAACCAAACTATGAGCATTTGGATGAGGATCTTCATGTTTTG
ATAATGGTTGAAGATACTGAAGATCGTGCTcgaatgaaattgaaaaaagc
tgTTGAAGAAGTTAACTTCCTCCTTACACCTCCAAAAGACGGAGAAGATG
CGATAAAAAAGAAGCAACTTCAGGATCTTGCAATTTTAAATGGTACTTAC
AGACACCCCAACAGTGAGGCAAGCCCTCCTGCTGCTGCCACAGTCACTCA
AAATGGTGtatCTCCAACTGGGCTGTTAAGTTTTCCGAGTCCTTCACCAG
TCGTTCCACAAAACAATACATCATTTCCAGCCATCCGAAACTCAGCAGGT
CAACTAAAAGCACACATTGCTAAAGTGAGAAGGATGTATCATCCCTACAA
ACAGGCTACAAGCTAACTTCTACCATCCTAACTCTCTTAAAATTCACTGT
TACTTTCTAATCGATTTAATTCTTGGGGAATGGATCGACTAATTGATTAA
TCGAATACTGTGTTCACACACACTACCATACATTGACAGTTTACATTCAC
GGATTTCATGGATTTACCTCATGACCACGACAAAAATAATACCCCACAAA
CACGTGTCTATGAGATGACACTATGTGTTTTAATTTTcgttttaaaaaac
aattttaacagAATCTTTATAACTATACATATAATTCGTATTTTTACACA
ATGCAacctttatttttatatttttagaagtCTAGAAACCGAAACTTTTT
AAGTCAAGTTTAAAGTTTCTAGTCCCTCTACATAAATATTTGACTAGAAT
TTTATATTAGATTAGTTCAGTTTAGTTTGAATACGTAGTCTGTTTAACCC
TGGTTCGCTTCtctttcttgaaaaaatgtaaCGGCTTTTCTTCTTGAGGG
CGTGAtaggaagaaagaaaaaatggtATTAAAAACCATCTGCTGAAACCA
CAAGCGACATTGGAATCAGGAGATTTTTTcggaaagaaataaaaacattg
gaatattttttgatcttaTCAATCTGTTacatcaatattttttaacttca
ataaaaaaacttaactTTGTTGTATCTAGATAAGATTTAAAACGAAATTT
TTCTTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCGTTAAAAGAA
AAGCGAAAAATTCTACTAACAATAAATGTTTTTAACAATTAATTCATAGC
CGCTAAAGACTAACtttcttgaagaaaaaaaaaaattatgtaacaTCACA
TGATACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAAGGAGGAAA
CCTTCGAATTCTGGtgtgtttttttaaatattcttccATCTTCTTTTAAA
CCAGGCTCTTGTAGAAAACATGTGTATGATTCGATCTCGAATGTTGAGTT
CGCTAGTTTTGGATTTATGACTTTGTAGTTTTAAATGCGCATAACGTACT
GGAATACACCCTTATTTCACTCATTTGGAAAAcaaaactaaagtctattc
acgataagtgtgcactcttttttcttttacctataacttttgaaggaatt
cttcaatctttataaatttggtatcattggaaaNAACCATCTGCTGAAAC
CACAAGCGACATTGGAATCAGGAGATTTTTTcggaaagaaataaaaacat
tggaatattttttgatcttaTCAATCTGTTacatcaatattttttaactt
caaaaaaaaacttaactGCGTTGTATCTAGATAAGATTTAAAACGAAATT
TTTCTTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCGTTAAAAGA
AAAGCGAAAAATTCTACTAACAATAAATGTTTTTAACAATTAATTCATAG
CCGCTAAAGACTAACtttcttgaagaaaaaaaaaaatatgcaaCATCACA
TGATACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAAGGAGGAAA
CCTTCGAATTCTGgtgtttgttttttaatattCTTCCATCTTCTTTTAAA
CGAGGCTCTTATAGAAAACATGTGTATGATTCGATCTCGAATGTTGAGTT
CGCTAGTTTTGGATTTATGACTTTGTAGTTCTAAATGCGCATAACGTACT
GGAATACACCCTTATTTCActcattttgaaaacaaaactaatgCTAATCT
TTCTATGACCCAATTCGGTCactaatttttcaaagaattaaCCTTTGTAG
TCTTTTGTCAGTGCATTTAGTGATTATTAGTTTAAATTTGTGTTGGTAGC
TTAATTTCTTTTCggtttaatgatttttttaaagaaactatAGATGATTT
ATTATACTTTTTAATTACCTAAATTaccaaattttttataaaattatcat
aTATATTATACgtgtaaatcaaaaaatttattatCAAATTATTATAGTAT
ATGGTGCTTccggaaaatttaaatattaggattattttttttcggacacg
cTGCGCAATGTGTCTGTAGAAAATACAGAAATAGAATTGATATTAAATAT
CGTTCATGTAATTCAAGCGATGGCTCTTATATCGATgaaactaccttaag
ggaactaattttggcgggaactaattttggcggatttggtgaatttagac
gaaattctccaaaattagttcctgccaaaattaaattttttgtttccttg
cctaaataacccctgaaattcatcaaaattgctcaaaataaggcaaaata
gaacagatttacgctgccattcgccaaaattagttcccgccaaaattaaa
aattttaggatatttgctgcctgccaaaattagttcaggccaaaaaagtt
cccttaaggtatattcCGTTTTTCGCAGACGCACTTTATATCAGAGAGCT
AAGAGAGTGTCAAAAATTATTATTACTATTGTACAAAGGATAAGATTTTC
AACACTTGTTGGTTTATAAATTAtatggaatttaattttgcaaaaaaaat
agatttttatgGTATAGATTTTATTaggaaaatattaaatttttacttca
taGAGAAAGAAGAACCTATATGGTATTCATTAAATTATTTACTGTCCCAA
TTTTTCTTCATTGTTTATCCATCTTTggacaagatcttttttcggaCAGT
ACCTGATAACTGTTGTGGTCAGTGTTGTAGGAAACGAATTAAAATGTTTT
CCTAACAGCTGTTATACAtttgtaatagaccttttcataaattacgtcat
gaacatcacttgcctcgtattcaaacaatttccatggtgatcatatccct
tgagacattaaatgatttttttaagaataggaagtagtt
Run BLAST on NCBI

transcript from alignment at sc0000408:179423..189119+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022217 ID=TCONS_00022217|Name=TCONS_00022217|organism=Clytia hemisphaerica|type=transcript|length=9697bp|location=Sequence derived from alignment at sc0000408:179423..189119+ (Clytia hemisphaerica)
GCTATCCAGTCTTCAGTTAATAGCTTCACAACAATTTAACTGCAAGTTAA
ACAGTTCAAAAAGTAAGTaatcttgaaaattaaaattaaattttagcgAC
AGAACATGCTTTTTCTGTTTTCGGGACCATTCATGGGTACGGTACTCGAC
AGCACTGATGATATCGTCATCTCAACCTATCTCAACCGTGGAATTTAGGT
ACTAGCATATAATAAAAGGGTGTTAGCAGGTACATACAGAATCACCAGGG
AGGCGTGTCACTTACAATCACTCACTTCACGCAAGACAGCTCGCTTCCAC
GCGCGTGTATAATAAAGACCAGAAAAAGTAAGCGACCGCAAAATCATGTT
GTGTTACGACTTGCGAATTTGcatttcgcaaaaaaaaaaacacgtttttt
gGTGAGGATCTAAATCTTATTAGAGGAGAAATTCCTTTTCCAATATATTT
GTGCTTAGGATTGACTCTTTATTgtatctttttctcaaaaaaatcacaat
gtTTTCTCTCGAGTTTTATTAGTGCGGatgtttgatatttttctttctgt
taaACTTTTTATTTACGAAGCGACGGGGAGCTTTGTTTTTCCAGCCTCGA
GTTGGTGAGTTTCGCGCTTTTCAGGGGTTTAGAATACAACAAGAAATGAC
CTCTTTTGTTTCGTTTAGTACTTAagtcatgaaaaaaatttttttttcat
aacgaAATTTTTATTAACGAAGATTTGATGTCATAGAAGAATCATATTAA
TATTTAAGAGAGGcaagaaagaaatatttttgtatgcGCTGACCCCCGTC
TCAAATCAGTGTTCTTCTACTAACAAATCAAGCTGGCGAGAATTTCTGAT
CACTCACAAAATACCTTGCCTCTTGACAGGACGACACAAGACGAACACGA
GACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAATTCAT
CTAACCAACTCATAACAAATTCAACTACCACAACAGCAGCAAGAAAAATG
AATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTATTGCA
AGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTGAAA
GACTTCTAGATGAAGGTGAGTTAGCTGTGATTACTCTTTTGATTCTAgta
aaaccttttgaaaaatgtCCCTGACAAAATGCCCATTGTCTAAGAAAGCT
GATTAAAATCAATCTCTTTTTCGACAGACAACTTCCTTAAGGTTATTTAA
TTAATTTTGTAGTAAGAGGTTTACCATAATGACGTAGAAATTACATCTCT
CTGCATACTGCAAGCATGTTTTTGTCAGCAGCTTGATTAAAAATGTCTGT
TTTGACTTTTGATTTATATTagatatcaatgttttgattcaatttttcaa
tattcaTAACATTGTTTGTagtttttgtaataaaaatttgaatatttctt
aGAAGAGCTACATGTTATATCCTGATTTTGTTCGATTTGGGTTATTTCCT
TTTACTATCACTTATTATTGATACACaccttttttatagaaattagTCGT
GTACGAAATGACATATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAA
ACCCTCTGGACCTCCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCA
AAGATCACCCTAAAGTAAGTAAATATTGTAGTGTTTCATTGTGCCAGTTC
TAATATTGATCAGGCCCCATTTCAAATACCCCTGTTGAAGTGGGTTGAAA
TTAACATATGAAATTTCTTTCCGGCCATTATGGAACACGTGGTGAAGGAG
TGAGTGCTCTTGAGAAAATGTAAGTCACCATTGACGGCCTAAATAAAGTG
ATGTGAGTAAAATTGAGCTTTTCAAATGCTAGAAATAGTTGTTGCCCAAC
TCTGTTGTTTCAGATATTGTCTGAAAATACTTTTCCCATGTAAATTGCTA
AAAATTTCCCCGGAAAAGTCGATTGTGCGCTGTAGAGGGATTAATCATCA
AAATTCTATTCACACTGATAGTGATAACATAGCCTTTCATAATATAGCCT
TTCATAATTCAGATTACTTCTGCAAGAACTGTTAGCGGTAAAATAATGAT
CAGTCCGAATTCTTAAAAGGCAGGGTTGCGTCCCCTAAGCTTTATCCAGG
CTAATTTTTTGGATATGAATGTAACATTTCTTTATTCtataaatttcatg
ttttattttaAGTTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCT
CACCTTACGTCAAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAG
GAAGAGGTTCAATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAA
CCAAACTATGAGCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGA
AGATACTGAAGATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAG
TTAACTTCCTCCTTACACCTCCAgtaagaaaattatgtttttgaatttGG
AATCATTATATACCAAACAAATCTCAAGTGCTCTAAAATTCTTTGCATAT
AAGTTGATATGCATTCAGCAACTTTGTTTATGTGTTTTACAGGCAGTACA
GGGTATTTGAGTAAGGGAGCTCAATTTTGTTTTCCTCATAATTTCAGAAA
GACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGGATCTTGCAATTTT
AAATGGTACTTACAGACACCCCAACAGTGAGGCAAGCCCTCCTGCTGCTG
CCACAGTCACTCAAAATGGTGGTAAGCAatgttttcaattattttgaagt
taatatgataattatgaaaaatcaaACCCCAAGCAGATCAGGCTATTTTT
GTTTCCTCTTCTGACCTGGtaagatgttttgtttttaccCAGAACTCCTT
TTTATCCGGGTGGAACATTTTGAATAAGAGGATAagtttttactttaaaa
ttttgaaaatttttctttcagtatCTCCAACTGGGCTGTTAAGTTTTCCG
AGTCCTTCACCAGTCGTTCCACAAAACAATACATCATTTCCAGCCATCCG
AAACTCAGCAGGTGAGCCTGTTCATTACGACAAcatgattttccgatttt
gtgATTTCGGTATAAATCCAACAGTGCCTACACAACAACATCCATCTTCG
CGATCGTTCGGTTGTTGCTCTCCAACTGTGTTTTAAGGAATCTTTTTGTG
CAATGTGTTACATCAGGGTGgactttttgagtttggttttcaaatttgaa
atttaattatGTGTGGTGTATTAAACCTAAACTTCAAAGTTTGCTACTAA
TCACTAGaacttttttaacattttggtaATTTGAATGGTGCATTATAAAT
GTCAATAAGAATTTATGAAGGGATAACTAATAATTTATTGCAATAACCAA
AATTAACTCTAAATTATAAAATCAGCATAACATTTTTGAGTTCTTAACAA
AACTAAAGACATTAGTTGTATATAGTTGGACTGGACCTTATCAACTTTTG
TGGAACCTCCAATAAAACTAAAAAGCTACTGACCATAATGTTAAACAACT
TTACCAAATAAAACTATTTGTCTGAATCTAATTTGATTTCAGCAGCTGCA
CTGCAAGGCTTATATCCTCTTGAAACTTTCGCTCAAAGAGGCACACCGGG
TGCTTCGTTTCTGGATTTTACCAATCTGGATGGCAGCTCGCTAATTTTGA
GTAAAAGATGATAATTCATTCCAAACCGGCTGTAACAACTACtgtccaaa
aatttaaaaactgttttgttgtgatttggtttatgtttttttattgcGAT
ATtcgcaaaataaatttcaaattaaatttttgtaaatccAATTTTATTGT
ATGATAATTTTATACGTTTGAAGTTTAGTTCAAGATTAATCTTGATACTA
ATTTTAACTTATATTTAATATAAATAACACATAAACGCTATTTTTACTAA
CTATTTACTTTTTTACcatttaataataataaaatactcAAATTGTGTCT
TTTTTAACGACGTTTAAAATGATAAATTGGAAAACTTGTATTTACTATTT
ATTCtgcaatttttatattttttaaactaactttcattattttgttattt
tttgaaagCAATCTTGAGGAAACTGCATACATTTTAGGGCAAGAAGGGTT
CAACACTTACagtacattacattacattctTTATGCAAGTTTCAGAAATC
CcttgccttaaaaaatcttgaatttttccTGTGGATagtattatttttaa
aaaacagaTTTCTCTGAATAATGTAGTAGAACTtactattttcatttcaa
taatattttatttgacGCTCAAAAGTAAAGAATTTTATAGAAATATGAAG
AAGTTtatgaatttgataaaaaacaaaaattctaaCAACTCATGCTAAGA
AAGGTCATGACATTTCAACATGGAACCGACCATGAAATGCTActaataac
aacaacaacagaaatGTATTGACCCAGAATAAACCCTGCTAACATCACGA
CTACTTATGTCATCCAACCAATCAACTGAAGAGAGAATTATTACAGAAAA
CTGagcaattttattattttatatgaAGATACTTTTaggtatttatttat
ttagcatAGATTATGTgaagagaaataaagaaaaaatgaattttaaaata
tttttggggtatttgattttctaaatgtTTTGGAAATTAGGAGAGCTTTT
GCAGATAAAAATTACAATCACTGACTTCGTGTcagtcaaatttatttttt
ttgataatttttcaattcccatgggaatattaaaaataattactgttaaa
aatcaaatttggaaATCAGATTTACGTTCTAATTGTTCTGGAATGTTTTT
TTGTGATATCGATGCCTGATGTACATAACATTGCACATTAAGACAACCCT
ACCCCCGTGATCTTCATTCCTCCCTTTTTCCTTGATTATTATTTGAAATG
AAAGCCAAGTGTATATTTTATTGCCTCAAACTTCAAAAGGAAAACTAGCT
TTGAAACATCTGTCTCATCCCACTCCTGAATGGCGAAATAGAGAGACTTG
ACAGCTATTATAGGACAAGGagcttaaaagattttctttttacttggcTT
TTTTTCTTGACCACTTTCGTGTTTTTCTTCCATTTGCTCTTTTTTTTATC
ACAAGCGATATTCTTTCTTGTATGTGTCAAAAAGTAACAGATAATGTTAA
GGGAGAAAAACGAAATAGAAAAATAGCTCATGAAACAGAAGAATAGAGAC
ACCTTTTATCGCCTTTCTTTTGTCCAATGTATCGAATCGACTTTCTGTTC
TTTTCttcatcaaaatatattttgatactTGATAATTACCGCGTCGTTAA
ATATTGATGCTATTTCTTCAAGGAGAGGATAGGTgaataacaaaaaggaa
aattctagCTATAaaactttgttcttttttttcactgaTTGAGAAATGAG
ACAGATGGAGGTACAGCAGTATCGTCCTTTCTTTTGTAAGAGTGGAATGA
AATAAATGATATAAGACTTCAATTTCTCATTGAAATGAAATAAGGAAAAt
gctttttctttctctttgttCATTATTGGGCACCTTTCCGTCATTAAAGA
GTCATGATGAAATGGCACCTTGAAGTGAGTGAAAGTGAGACCACACCCTT
GAACTCTTATCTCCTTTCTTTTATCCTATTGTATTCATAATACCTGACAC
ATGCACTTATTCTAAACTATTCTCAATTAGTGCATTAGACAAAGATTAGC
TTCTGAAAGTATTTTTTCTACCTGTGACAATTCTCTCTTTTTACTTATCT
TAGTTGATAAGGGTGTGTCTTCAATTTGTCGGTTCTCtatgttattatta
ttgtaACATGTCTCTGTTGTTATGTTATaacttagtttttttttcacttg
aatttagtttgtatttttttaaacgtTTCTAATTTACGTCATCAATCTTA
TACAgtgtgtccaaaaaaaaaaaaacggaaaaGAATTCATATAAAGAAAA
GTCATCATATTTTATGCCGACCATTACTTGAAGCCAAATTAATGACTTTG
GGAATTTGATAACTATTTGCTTTAAAAACATTAATTGTTCCCTGGCTAGT
GAGatccgttttttttttcaaacacacTTACTTACTCCGTTAATGTTATT
GTACAGGTCAACTAAAAGCACACATTGCTAAAGTGAGAAGGATGTATCAT
CCCTACAAACAGGCTACAAGCTAACTTCTACCATCCTAACTCTCTTAAAA
TTCACTGTTACTTTCTAATCGGTGCGTAATCATTTATTTTCGTTTTATGT
TTGTTACTGTATAATACACCGGTATCTAAGAAAGACATAGTTGAATATAC
CGACCCAATCTTTCTTAGACACCACCATGAAGTCTCTTTATCTCCAGACA
TGAATGAAAGCGACAAATTTTCTTTCCCCAAAAAAGACTCCTTATCTGTT
CAAAAAACTTTAGGCACCTTGCCTGATACATCGAGATAAAGAGGCTTTAC
AAATCTTACCCATGCCCCCAAAATAACCCTCTATATTTCTAATTGAACAG
TTTTTTAATTGATTGACACTGTTTCCCTTTAAACTGTGAATACTGACATG
GATCCCTGATGAGTTTTAGTGTGGGGTCAATAACTCTTTAGTTATGTTTA
TAAGTTCACATAATGTTTATCTTCGCTCTAAGTCATGTTTTCTCTCCAAA
GAATCCTGACTTTCCTGCTGATGACAAAGTGATAGCTttcatgttttaat
tttcatccGTTCCCCCCTAAGCCCCATTAATTTCCTCTCCACTCTATGAT
TTACTTTATTTGCTTACAAACTaatcattttttgttgtttttaatatttt
ccttttccattATAATAACAGATTTAATTCTTGGGGAATGGATCGACTAA
TTGATTAATCGAATACTGTGTTCACACACACTACCATACATTGACAGTTT
ACATTCACGGATTTCATGGATTTACCTCATGACCACGACAAAAATAATAC
CCCACAAACACGTGTCTATGAGATGACACTATGTGTTTTAATTTTcgttt
taaaaaacaattttaacagAATCTTTATAACTATACATATAATTCGTATT
TTTACACAATGCAacctttatttttatatttttagaagtCTAGAAACCGA
AACTTTTTAAGTCAAGTTTAAAGTTTCTAGTCCCTCTACATAAATATTTG
ACTAGAATTTTATATTAGATTAGTTCAGTTTAGTTTGAATACGTAGTCTG
TTTAACCCTGGTTCGCTTCtctttcttgaaaaaatgtaaCGGCTTTTCTT
CTTGAGGGCGTGAtaggaagaaagaaaaaatggtATTAAAAACCATCTGC
TGAAACCACAAGCGACATTGGAATCAGGAGATTTTTTcggaaagaaataa
aaacattggaatattttttgatcttaTCAATCTGTTacatcaatattttt
taacttcaataaaaaaacttaactTTGTTGTATCTAGATAAGATTTAAAA
CGAAATTTTTCTTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCGT
TAAAAGAAAAGCGAAAAATTCTACTAACAATAAATGTTTTTAACAATTAA
TTCATAGCCGCTAAAGACTAACtttcttgaagaaaaaaaaaaattatgta
acaTCACATGATACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAA
GGAGGAAACCTTCGAATTCTGGtgtgtttttttaaatattcttccATCTT
CTTTTAAACCAGGCTCTTGTAGAAAACATGTGTATGATTCGATCTCGAAT
GTTGAGTTCGCTAGTTTTGGATTTATGACTTTGTAGTTTTAAATGCGCAT
AACGTACTGGAATACACCCTTATTTCACTCATTTGGAAAAcaaaactaaa
gtctattcacgataagtgtgcactcttttttcttttacctataacttttg
aaggaattcttcaatctttataaatttggtatcattggaaaNAACCATCT
GCTGAAACCACAAGCGACATTGGAATCAGGAGATTTTTTcggaaagaaat
aaaaacattggaatattttttgatcttaTCAATCTGTTacatcaatattt
tttaacttcaaaaaaaaacttaactGCGTTGTATCTAGATAAGATTTAAA
ACGAAATTTTTCTTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCG
TTAAAAGAAAAGCGAAAAATTCTACTAACAATAAATGTTTTTAACAATTA
ATTCATAGCCGCTAAAGACTAACtttcttgaagaaaaaaaaaaatatgca
aCATCACATGATACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAA
GGAGGAAACCTTCGAATTCTGgtgtttgttttttaatattCTTCCATCTT
CTTTTAAACGAGGCTCTTATAGAAAACATGTGTATGATTCGATCTCGAAT
GTTGAGTTCGCTAGTTTTGGATTTATGACTTTGTAGTTCTAAATGCGCAT
AACGTACTGGAATACACCCTTATTTCActcattttgaaaacaaaactaat
gCTAATCTTTCTATGACCCAATTCGGTCactaatttttcaaagaattaaC
CTTTGTAGTCTTTTGTCAGTGCATTTAGTGATTATTAGTTTAAATTTGTG
TTGGTAGCTTAATTTCTTTTCggtttaatgatttttttaaagaaactatA
GATGATTTATTATACTTTTTAATTACCTAAATTaccaaattttttataaa
attatcataTATATTATACgtgtaaatcaaaaaatttattatCAAATTAT
TATAGTATATGGTGCTTccggaaaatttaaatattaggattatttttttt
cggacacgcTGCGCAATGTGTCTGTAGAAAATACAGAAATAGAATTGATA
TTAAATATCGTTCATGTAATTCAAGCGATGGCTCTTATATCGATgaaact
accttaagggaactaattttggcgggaactaattttggcggatttggtga
atttagacgaaattctccaaaattagttcctgccaaaattaaattttttg
tttccttgcctaaataacccctgaaattcatcaaaattgctcaaaataag
gcaaaatagaacagatttacgctgccattcgccaaaattagttcccgcca
aaattaaaaattttaggatatttgctgcctgccaaaattagttcaggcca
aaaaagttcccttaaggtatattcCGTTTTTCGCAGACGCACTTTATATC
AGAGAGCTAAGAGAGTGTCAAAAATTATTATTACTATTGTACAAAGGATA
AGATTTTCAACACTTGTTGGTTTATAAATTAtatggaatttaattttgca
aaaaaaatagatttttatgGTATAGATTTTATTaggaaaatattaaattt
ttacttcataGAGAAAGAAGAACCTATATGGTATTCATTAAATTATTTAC
TGTCCCAATTTTTCTTCATTGTTTATCCATCTTTggacaagatctttttt
cggaCAGTACCTGATAACTGTTGTGGTCAGTGTTGTAGGAAACGAATTAA
AATGTTTTCCTAACAGCTGTTATACAtttgtaatagaccttttcataaat
tacgtcatgaacatcacttgcctcgtattcaaacaatttccatggtgatc
atatcccttgagacattaaatgatttttttaagaataggaagtagtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012455XLOC_012455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022217-exon-sc0000408-1491911889:179423..179484TCONS_00022217-exon-sc0000408-1491911889:179423..179484Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:179423..179484TCONS_00022217-exon-sc0000408-1510915933:179423..179484Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:179423..179484TCONS_00022217-exon-sc0000408-1575043694:179423..179484Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1491911889:180302..180537TCONS_00022217-exon-sc0000408-1491911889:180302..180537Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:180302..180537TCONS_00022217-exon-sc0000408-1510915933:180302..180537Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:180302..180537TCONS_00022217-exon-sc0000408-1575043694:180302..180537Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1491911889:180962..181086TCONS_00022217-exon-sc0000408-1491911889:180962..181086Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:180962..181086TCONS_00022217-exon-sc0000408-1510915933:180962..181086Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:180962..181086TCONS_00022217-exon-sc0000408-1575043694:180962..181086Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1491911889:181635..181895TCONS_00022217-exon-sc0000408-1491911889:181635..181895Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:181635..181895TCONS_00022217-exon-sc0000408-1510915933:181635..181895Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:181635..181895TCONS_00022217-exon-sc0000408-1575043694:181635..181895Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1491911889:182070..182193TCONS_00022217-exon-sc0000408-1491911889:182070..182193Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:182070..182193TCONS_00022217-exon-sc0000408-1510915933:182070..182193Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:182070..182193TCONS_00022217-exon-sc0000408-1575043694:182070..182193Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1491911889:182394..182483TCONS_00022217-exon-sc0000408-1491911889:182394..182483Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:182394..182483TCONS_00022217-exon-sc0000408-1510915933:182394..182483Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:182394..182483TCONS_00022217-exon-sc0000408-1575043694:182394..182483Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1491911889:185579..185693TCONS_00022217-exon-sc0000408-1491911889:185579..185693Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:185579..185693TCONS_00022217-exon-sc0000408-1510915933:185579..185693Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:185579..185693TCONS_00022217-exon-sc0000408-1575043694:185579..185693Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1491911889:186294..189119TCONS_00022217-exon-sc0000408-1491911889:186294..189119Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1510915933:186294..189119TCONS_00022217-exon-sc0000408-1510915933:186294..189119Clytia hemisphaericaexon
TCONS_00022217-exon-sc0000408-1575043694:186294..189119TCONS_00022217-exon-sc0000408-1575043694:186294..189119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:179423..189119 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	6.26305e-10	0	0	0	1.53359e-07	3.85405e-06	2.57492e-10	0.0377098	2.81486	7.28513e-06	0.000169656	0.218252	1.12053	9.39589e-05	0.0112829	0.00693007	1.32168	8.83387e-06	0	0.00546251	3.0621	1.21098e-05	1.37744e-10	0	0	2.44593e-06	0	5.47003e-09	5.04396e-07
Blast
[Close]
BLAST of TCONS_00022217 vs. Swiss-Prot (Human)
Match: QKI (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.761e-64
Identity = 113/193 (58.55%), Postives = 142/193 (73.58%), Query Frame = 1 
Query:  211 EYLNQLLQDKTTVSKMPK---IFLHSERLLDEEISRVRNDIF------CPSSFLMSLPKPSGPPVKLTEKVYAKVKDHPKFNFVGRIIGPRGLTLRQVEQETGGKLLVRGRGSMKDKKVEEEKRGQPNYEHLDEDLHVLIMVEDTEDRARMKLKKAVEEVNFLLTPPKDGEDAIKKKQLQDLAILNGTYRHPN 762
            +YL QL+ DK  +S +P    IF H ERLLDEEISRVR D++              LP   GP V+L EK+Y  VK++P FNFVGRI+GPRGLT +Q+E ETG K++VRG+GSM+DKK EE+ RG+PN+EHL+EDLHVLI VED ++RA +KLK+AVEEV  LL P  +GED++KK QL +LAILNGTYR  N
Sbjct:   16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDAN 208
The following BLAST results are available for this feature:
BLAST of TCONS_00022217 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QKI2.761e-6458.55Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
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