TCONS_00022325 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022325
Unique NameTCONS_00022325
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2437

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022325 ID=TCONS_00022325|Name=TCONS_00022325|organism=Clytia hemisphaerica|type=transcript|length=2437bp
ttaggaaaaaatataaaacaatcaCCTGTTAAATAACTTCAGCTGTTAAA
AATGAGGGTCGTCGCGTTAATAAGCGGAGGGAAGGATAGTTGTTTCAACA
TGATGCATTGTGTTTACCAAGGGCATGAGATTGTTGCTTTGGCGAATCTT
CAACCAGAAGAAAAAGACGAAATGGACAGTTATATGTATCAGACAGTGGG
TCATGACGTCATCGACGCTTATAGTGAAGCGTTAGGTTTACCGTTGTACA
GAAGGGTGATCCGTGGCCGCTCAGTGAACGTGCAAGAAGATTATCAGGTT
GTCGCTGAAGATGAAGTTGAAGATCTTTTTCAATTGCTCAAAAAAATCAA
GgaagaaattgattttgaaggAGTTTCATCTGGAGCGATTCTGTCTAATT
ATCAAAGAGTGCGCGTTGAACATGTCTGCAATCGGTTGGAATTGAAATCA
CTGGCTTATCTTTGGCAACGAAACCAAGATGAGCTGCTGGATGAAATGAT
TGCTGCCGAAGTCACTGCAATTCTCATCAAAGTTGCTTCGCTTGGTTTGA
AGCCATGTCATCTTGGGCAAACCTTACATGAAATGCGACAAAGTCTTCAC
AGGATGAAGAAGGAATGTTTTCTGAACGTTTGTGGAGAAGGAGGGGAGTA
CGAAACACTTGTTCTTGATTGTCCACTATTCATCAAGACAATCGTCATAG
ATGAATCGACAGTTGTGACACACGAAGAAAGTAATGATGTTTTGACCGTT
GCatacaaaacttttcaaaagttccATCTCCGAGAGAAACTCAATGTTGT
AGAACAGCAATATGACATTACGGGAACGAATGAAGGGCGTCACCATAGCA
ACACCTCCCTTGTTGAACGTACATGTGCCACAGCTTTGCTCTAATGATCA
GCAGGAGAAAGACAATGCAGATGTAATTTGCACTCGAACTGATGTGCCCA
AATCAAAGGATTGTTGCTTCAGTTTTCGATCCAACAAAACAGTTGGTTGG
GTTAGTGGCATAGTTTGTCCAGTTCAAGAGGACAAAACTCTTGAAGAATC
GACGTTGCAAGTACTCAATACATTTAAAGAGAAACTTGAAGAACATTGTG
GTGGACAAGACGAAAATAATCCAATCAACTGTTTAGTTCATCTTTTTGTT
CGAAACATGGATGATTTTGCACGAATCAATAACGTCTACAAAAGGTTCTT
CAAAGCTAAACCACCTGCTAGAGTTTGTGTGAAGGTGGAATTGCCGCCGA
ACGAACATTTTCGTATGGACACTCATTTAGTAAACCAATCACAACGTCAG
GTGCATTACGTACAAGGCATTTCATATTGGGCACCCGCCAACATCGGACC
ATACAGTCAAGCCGTCAAGTGCACAATAGGACGGTTGAAGAAAGTGTTCT
TCTCGGGTTCCATCCCGTTGCAACCAGCTTCCATGCAACTTTTGACGGAT
GATTTTCCACGTGAAGCCATGCTTAGTCTAAAACACGTCCATGAAGTAGC
AGAAGTGTTTGCAAACGAACGACACTCGAACGTTCATTATGGAAGTATCA
CTTGCTATGTCAcccaatacaaatttatgaaaatggcTCAGAACATCTTC
GAACATCATCAGGATTTTTTTCCAGCAGAGAATTACGAAGTAGGAGTGGT
TTGCGTCCCTCGCTTGCCACGTAATGCACGCATCGAATGGCACGTCAACA
TGGTCATCCCATTGCAACAAGATGAAGATTGTAGCGAGGATGAGGATGGC
CAAGATGAAACTGAAGATGTGGTCAATGATGTTTCAAGATATTTCAAGAA
CTCCAGAGTATTTTCTCTCGATAACCCATGTGGAGTCCTGCGAGAAGTTC
CTCCATCAAAAGATGCTCCATTTTGCCGTCTGTTTGTTGCTATTGGTGAT
ACAGCATCACGTGACCAAGAAGTGAAAGAAGCCACAAACATGATATACGA
GCAGTTAAAACCAAAGACCATTGTTTCTATTGTTCCTGTTACATACGTGA
TGGACGGTGCTCTGATGATGTTGTCTTTTGATTTCCATTCTTGATTTGTT
TGTTGGGCTTCGCTCATCAACGGGAGAGGGGGAGATGCCCCCTATTTCTT
CGGAAGTACGCGCACTCAAGGACCACTCCATTGAAAGGATACGCTAGCCA
TTGTATATAAGACGATACATTGGCTTACAATGAGATTGTTGATACTCAAT
GGTTACCAACCAAGCTTACCATGACTAAACCCTTGTTCTAACGGTTTGTT
GGTACTAAAGGGGAATAAAACATAATTTGAGGGGCCAACAAGATGAACAT
TTTATCAAGAGTTTTTATAGTTTTATACTACCAAAAATGCATTTTTGTGT
ATACATTTTTATATTATTACAgaatatattattttgatgctttaaTGATT
ACATTGTACATGAGGATCAAATTTATTTCTCGTTTCG
Run BLAST on NCBI

transcript from alignment at sc0000411:98967..105881-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022325 ID=TCONS_00022325|Name=TCONS_00022325|organism=Clytia hemisphaerica|type=transcript|length=6915bp|location=Sequence derived from alignment at sc0000411:98967..105881- (Clytia hemisphaerica)
TTAGGAAAAAATATAAAACAATCACCTGTTAAATAACTTCAGCTGTTAAA
AATGAGGGTCGTCGCGTTAATAAGGTAAGTGTCTTTTTATATATTTGTTT
AACTCAGTACCTGCCATGGTAAAGTTGAAGAATACGGCCTGATTTTCAGA
GGTCTCTTCAGTAAATTAGGAGTAGTGGTGTGGTGGTCATCGCTCTTGAC
TCCAGTCTGGGAGACCCGAGTTCGATTCCCACTGTAGTACTACGGTTCAC
TTGGCAAATGAACACACTTTCGCCCGGCTCAACCCATACCATGTGAGGGG
AATTGGGTACCACTACTCTGATACAAGAGTGTGGATGATATGCCAGGCAT
TGTTGTGTGTGGTATCACTTATCCTGTTCCGCGTCTGCGACGAGCTATTA
TGCTCTCCCGCGTGGTTCGAGTGTCATCACTATGCATCATGGTATCTGTG
TCTCGCGTGCACAGAACCAGCGATGTCTGGATAGCGCTAAGCGTTCCAAA
TCGAAAGAGGAGGAATTCCTACTTCGCAAGGATTAGGACCCATTCCCCAG
TGGGGAGGGCTCATCATATCATCTTCAGTAAATTAGGTAACAATACCTGT
TTTGAATTTCAGCGGAGGGAAGGATAGTTGTTTCAACATGATGCATTGTG
TTTACCAAGGGCATGAGATTGTTGCTTTGGCGAATCTTCAACCAGAAGAA
AAAGGTAGACTTATTTTACTGGGTCCACTCAGCGTAGTAAATAACCACGT
GTCAAGACATATTCTGATGAATCTACCGGGTTGGAATCCTTTTGTTTTTT
ACCCTAAGCTTATGTAAATAACATGTATTGCCCATAGCGTCTTACCCTTC
ACACGGCCACCATTCATAGCGTAAGCTCAAAACTTTTGATCTTTTTAGAC
GAAATGGACAGTTATATGTATCAGACAGTGGGTCATGACGTCATCGACGC
TTATAGTGAAGCGTTAGGTTTACCGTTGTACAGAAGGGTGATCCGTGGCC
GCTCAGTGAACGTGCAAGAAGATTATCAGGTTGTCGCTGAAGATGAAGTT
GAAGATCTTTTTCAATTGCTCAAAAAAATCAAGGTAATAATCATTTTCTT
TGCACTTTGAGAAAATATCTGACCTAATGAATGAAAGCATGTTCTACAGG
TTGGTTGGCCTTCCAAGATTCATATATTTGTTAGCTCAGAAGCAAACGAT
GTAGATTTAAAATGAATAATCCTTTCATTGTTAATATTTTAGGAAGAAAT
TGATTTTGAAGGAGTTTCATCTGGAGCGATTCTGTCTAATTATCAAAGAG
TGCGCGTTGAACATGTGTAGGTAATTGTTTGTCACTTGAAATTGTTGCAA
CTAACCAGTCTCACAGTTTTGAACTAAATTCAAAGTTTTTTTCATGAAAT
GTTTCGAATTGGTTCCAATTGGTTCTTCTAACCTCGAGGGTCCAAAAACT
TCAGTGCCGTAGCAACTGGCTACCCCCCCCCAATAATATTTTCAAAAATG
GTTATTTTGCAAAATGCAAAGTTTTTCTTTTTTAATTTGTCATAAATTTA
TTTTGAGTGCATTTTCAAGCAATCTAGAGCTCAAAATTTCAAAATTTCCT
TGTTCTTAAAACACAGCTGCAATCGGTTGGAATTGAAATCACTGGCTTAT
CTTTGGCAACGAAACCAAGATGAGCTGCTGGATGAAATGATTGCTGCCGA
AGTCACTGCAATTCTCATCAAAGTTGCTTCGCTTGGTAAGTCAAAATATG
AAACAGGTGTTAACAATTGGCTACTTGTTAGTGGCTTTAATAATACGCTT
TAACCTGAGAAACTTTGATTTTCTTCAGGTTTGAAGCCATGTCATCTTGG
GCAAACCTTACATGAAATGCGACAAAGTCTTCACAGGATGGTAACGTCTG
CTTTGTTTAATTGTAAATACTTCGTCGCCGGTTGCCTAGAAACCTCTAGA
AGAATTTTTGATTTTTTTCTCATAGTAGAGTATCCAATTTGAAATTGATT
TTTGAACTTTTCGCATTGCAGAAGAAGGAATGTTTTCTGAACGTTTGTGG
AGAAGGAGGGGAGTACGAAACACTTGTTCTTGATTGTCCACTATTCATCA
AGACAATCGTCATGTAAGTTGATTGGCACTCCAGCTTATCTATCCTTTAA
GAGGTTGTCGCTATTGCTTCTAGACCAGTTTCTGAAGCATAATGAACGTG
GTTTGGTTTTCCATGAAAGGGTTATCTGTTCAGCGGTTGAAATCCAATAT
AGATGTTCTTTAATGGAAAGACTTGACTCACATAAAAAGTCCTGAAGAGC
TACTGAAAGATTGACGCCAATGGATGTACTGAAATGTCAATTACAAGTAA
ATCTTTTAATTCCTTACAGAGATGAATCGACAGTTGTGACACACGAAGAA
AGTAATGATGTTTTGACCGTTGCATACAAAACTTTTCAAAAGTTCCATCT
CCGAGAGAAACTCAATGTTGTAGGTAGTTGAATTCTCCTTCTTCAACAGA
TGTGAATAAACACAATCTTCGTTACTTCCTACTCGCCATGATGCCTATCT
ATTGTCTCTTAGTCATAGCTTATCTACAACATCCCTTTAATGGTTTTCCA
TTCCAGAACAGCAATATGACATTACGGGAACGAATGAAGGGCGTCACCAT
AGCAACACCTCCCTTGTTGAACGTACATGTGCCACAGCTTTGCTCTAATG
ATCAGCAGGTATTGTATGCTCCTCGTATGAGTAAAACACTATCGTTCTCT
TGTTTATTCTCCATTCTCTCCATTCTTTGTCAGTGCAATATGCATACTTT
GATGAGTGTTTGACTATTTCACAATACCACGATTGTTTTCTTTAGGAGAA
AGACAATGCAGATGTAATTTGCACTCGAACTGATGGTAAGCTTTTTCCTT
TTATTTTCACTCCTTTCTTTGATCCAGAATGACTAGGGTTGGGCCAGGGT
GAGATGGATTCATGGATGTGTACTACCGTTACAAATCCATCTGCCACCAT
CCATGTGCACGTACCCAAGTCTTTAAACTGTTTACGCTATCCCAGCTTTG
TTTTTACCCCTCATTTTAAGTTTGTTTCTCTTCGAAAGCATTATAAGCAG
TAAACTACTATTTCACTGGAGTTACTCTAACTTTCTTTGTAGTGCCCAAA
TCAAAGGATTGTTGCTTCAGTTTTCGATCCAACAAAACAGTTGGTTGGGT
TAGTGGCATAGTTTGTCCAGTTCAAGAGGACAAAACTCTTGAAGAATCGA
CGTTGCAAGTACTCAATACATTTAAAGGTGGGTCATTTGAATTGTGGCTT
TTATTGTGATGTTGCGCGATCGTGAGAAATTCAATCATTAATCATTCAAT
CGTAAAGCGTACCCAAATGATAAGTTTTTTTGTGATTCACACATAATTGT
TAAAATTGTTTTCTTTCCAGAGAAACTTGAAGAACATTGTGGTGGACAAG
ACGAAAATAATCCAATCAACTGTTTAGTTCATCTTTTTGTTCGAAACATG
GATGATTTTGCACGAATCAATAACGTCTACAAAAGGTTCTTCAAAGCTAA
ACCACCTGCTAGGTACCATTGCTTAAATTACAATCGAAATAAATGCGAGG
ATTAAAATTCCAAATATCAACCTTAAAATGTTCATCCATTTTTAAGTCTT
TCAATCTCTTTAAAAACAACCAGATTCAACTTTTCTTTTTAGAGTTTGTG
TGAAGGTGGAATTGCCACCGAACGAACATTTTCGTATGGACACTCATTTA
GTAAACCAATCACAACGTCAGGTGCATTACGTACAANGTACCATTGCTTA
AATTACAATCGAAATAGATGCGAGGAGATTTGATCACTATGTATTAAAAT
TCCAAATATCCACCTTAAAATGTTCATCCATTTTTAAGTCTTTCAGTCTC
TTTAAAAAGAACCAGGTTTAACTTTTCTTTTTAGAGTTTGTGTGAAGGTG
GAATTGCCGCCGAACGAACATTTTCGTATGGACACTCATTTAGTAAACCA
ATCACAACGTCAGGTGCATTACGTACAAGGCATTTCATATTGGGCACCCG
CCAACATCGGACCATACAGTCAAGCCGTCAAGGTGCCACTTTCTTTTCTT
TAGTTTACTATGGGATATAACTCTTTTCGAGTATTATGGATCCTGTTTGT
TTTTTGAAACGTTTGTTGTCGGAACATTCTAACAGCTTCTTTTAGGCTGT
CGCCTTTGTATATTTCAGTGCACAATAGGACGGTTGAAGAAAGTGTTCTT
CTCGGGTTCCATCCCGTTGCAACCAGCTTCCATGCAACTTTTGACGGATG
ATTTTCCACGTGAAGCCATGCTTAGTCTAAAACACGTCCATGAAGTAGCA
GAAGTGTTTGCAAACGAACGACACTCGAACGTTCATTATGGAAGTATCAC
TTGCTATGTCACCCAATACAAATTTATGAAAATGGCTCAGAACATCTTCG
AACATCATCAGGATTTTGTAAGCTTTTATTTATACAATTTAGTTTATCTC
GACAGTCGAACATCTCGAGAGTATACCCCTTTAACATCTATTGATTCCCC
TTCCCATCTTCTTGATAACACTTTCTTAAATCGTTGTGACAGAACTATTT
CTGGAAAGTTAACGGGCATCAGTGAACTTCTTTTATCTGTATCATTAAGG
GTGCATACCATTTAACCAAAACCCAAAAAAGTGAAACAGAGGGTTTAGCG
AACGCATTGATTCGTTTAGAATTTTACCTAAACAGACGATCAAAGCCAAC
AGTCTTTTTTCTGTGTTTTCTTTGTTTGCTAAACCGAGGGTTTAGCCAAC
AGACGGCACCATTTGATTTTTTGTTTTGCTAAACCATTTTTCTAACCAAG
CATTACACCTTGTTTACGCTGGTTCGCTAAGTGCGCACATCCATAAGCCC
TAAGCTTTAATGTTTTCTTCAGCTAGGCTACCATTTTGAAATTCGTTGCT
GTGACTTCAGGCCTTTAAATTCAAAATGGTAGCGTGAGAAGTGTAAGATC
CTAGAAATCGAATTAGCAATGCAATAGCTTCTTTGTTTAGGTAAACCTAA
CACTCAGACGCATATTGTTCATTTAGTTTCCAGCAGAGAATTACGAAGTA
GGAGTGGTTTGCGTCCCTCGCTTGCCACGTAATGCACGCATCGAATGGCA
CGTCAACATGGTCATCCCATTGCAACAAGATGAAGATTGTAGCGAGGATG
AGGATGGCCAAGATGAAACTGAAGGTATGTGAGAAGAAATGATCTTTCAC
ATCAAATCGATAAAAGAATCAGAGATATTTGATATGGTTGATTCCTCAAC
CTAAATTTAATAAAATCAAAGAGGCAAAAATGGGAGTTTTTAACTTCAAA
CGACTTACGAATAGACATTTTACTTGTCTTTAAAGTCAATTGTCACAAAT
TAGGTTGTAGATTCGACCTTGTTCGCTTAATCACTTTTTCAAGATTTTTC
GAATGTTATTAGAAGCGGTCCAATCAATCGCTTAGCCGCCAATCAATCAT
TTAGCTGTTTCCATAACTGAGAAGCTATATTGGCTAATCCTATGGCCTGG
GGGTAGGAATTTATTCACACCGTTTAGGAATTAGCATTTATTTAGCATCT
GTTTAGGACTCTATTGAAGATTTTACGGACGGATGTGAAGAAACAATTTT
ACAGATTAAAGCTGGAGAAATTAAACATTTTCCCCAACCGTTGAGAAAAA
GAGGATCCTCGTCTTGTGTGTCTTACTAACGCATCCTAAGAGTTGATTTA
TAATTCCACTGTTTTTTTTAGATGTGGTCAATGATGTTTCAAGATATTTC
AAGAACTCCAGAGTATTTTCTCTCGGTAATATTTTTAGTCTTTGATGTCT
TTGATGGCGAATAGCTAATATTCTGGGGGGGGGGGGGAAAAAAAAAAAAA
AAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTACCTTTTTAGATAAAATGCTCTCAATTATTTTAACTTTAGATAAC
CCATGTGGAGTCCTGCGAGAAGTTCCTCCATCAAAAGATGCTCCATTTTG
CCGTCTGTTTGTTGCTATTGGTGATACAGCATCACGTGACCAAGAAGTGA
AAGGTCTATCCACACTTTGTTTTACTTGATCCTTTTTGTGGTTATATATC
TGCTTTCTGAAATTTATTGAAAGGATTTTTCAAATGGTTACGGTTGAGGT
CTTTAACACTTTCCATCTGGCTCCAATTAAAATTCGCGAAATGTTGTATT
ATTTGTAAGTTATATGAGCTGACAAATAACTGTTACTTTCTCTTTCTCTC
TTCCAGAAGCCACAAACATGATATACGAGCAGTTAAAACCAAAGACCATT
GTTTCTATTGTTCCTGTTACATACGTGATGGACGGTGCTCTGATGATGTT
GTCTTTTGATTTCCATTCTTGATTTGTTTGTTGGGCTTCGCTCATCAACG
GGAGAGGGGGAGATGCCCCCTATTTCTTCGGAAGTACGCGCACTCAAGGA
CCACTCCATTGAAAGGATACGCTAGCCATTGTATATAAGACGATACATTG
GCTTACAATGAGATTGTTGATACTCAATGGTTACCAACCAAGCTTACCAT
GACTAAACCCTTGTTCTAACGGTTTGTTGGTACTAAAGGGGAATAAAACA
TAATTTGAGGGGCCAACAAGATGAACATTTTATCAAGAGTTTTTATAGTT
TTATACTACCAAAAATGCATTTTTGTGTATACATTTTTATATTATTACAG
AATATATTATTTTGATGCTTTAATGATTACATTGTACATGAGGATCAAAT
TTATTTCTCGTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012520XLOC_012520Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022325-exon-sc0000411-1575043694:105808..105881TCONS_00022325-exon-sc0000411-1575043694:105808..105881Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:105178..105269TCONS_00022325-exon-sc0000411-1575043694:105178..105269Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:104799..104983TCONS_00022325-exon-sc0000411-1575043694:104799..104983Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:104566..104639TCONS_00022325-exon-sc0000411-1575043694:104566..104639Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:104147..104265TCONS_00022325-exon-sc0000411-1575043694:104147..104265Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:103992..104053TCONS_00022325-exon-sc0000411-1575043694:103992..104053Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:103769..103860TCONS_00022325-exon-sc0000411-1575043694:103769..103860Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:103409..103512TCONS_00022325-exon-sc0000411-1575043694:103409..103512Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:103174..103275TCONS_00022325-exon-sc0000411-1575043694:103174..103275Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:102997..103036TCONS_00022325-exon-sc0000411-1575043694:102997..103036Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:102605..102739TCONS_00022325-exon-sc0000411-1575043694:102605..102739Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:102320..102461TCONS_00022325-exon-sc0000411-1575043694:102320..102461Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:101800..101947TCONS_00022325-exon-sc0000411-1575043694:101800..101947Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:101415..101663TCONS_00022325-exon-sc0000411-1575043694:101415..101663Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:100658..100805TCONS_00022325-exon-sc0000411-1575043694:100658..100805Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:100057..100110TCONS_00022325-exon-sc0000411-1575043694:100057..100110Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:99679..99786TCONS_00022325-exon-sc0000411-1575043694:99679..99786Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1575043694:98967..99475TCONS_00022325-exon-sc0000411-1575043694:98967..99475Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:105808..105881TCONS_00022325-exon-sc0000411-1510915933:105808..105881Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:105178..105269TCONS_00022325-exon-sc0000411-1510915933:105178..105269Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:104799..104983TCONS_00022325-exon-sc0000411-1510915933:104799..104983Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:104566..104639TCONS_00022325-exon-sc0000411-1510915933:104566..104639Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:104147..104265TCONS_00022325-exon-sc0000411-1510915933:104147..104265Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:103992..104053TCONS_00022325-exon-sc0000411-1510915933:103992..104053Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:103769..103860TCONS_00022325-exon-sc0000411-1510915933:103769..103860Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:103409..103512TCONS_00022325-exon-sc0000411-1510915933:103409..103512Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:103174..103275TCONS_00022325-exon-sc0000411-1510915933:103174..103275Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:102997..103036TCONS_00022325-exon-sc0000411-1510915933:102997..103036Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:102605..102739TCONS_00022325-exon-sc0000411-1510915933:102605..102739Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:102320..102461TCONS_00022325-exon-sc0000411-1510915933:102320..102461Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:101800..101947TCONS_00022325-exon-sc0000411-1510915933:101800..101947Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:101415..101663TCONS_00022325-exon-sc0000411-1510915933:101415..101663Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:100658..100805TCONS_00022325-exon-sc0000411-1510915933:100658..100805Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:100057..100110TCONS_00022325-exon-sc0000411-1510915933:100057..100110Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:99679..99786TCONS_00022325-exon-sc0000411-1510915933:99679..99786Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1510915933:98967..99475TCONS_00022325-exon-sc0000411-1510915933:98967..99475Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:105808..105881TCONS_00022325-exon-sc0000411-1491911889:105808..105881Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:105178..105269TCONS_00022325-exon-sc0000411-1491911889:105178..105269Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:104799..104983TCONS_00022325-exon-sc0000411-1491911889:104799..104983Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:104566..104639TCONS_00022325-exon-sc0000411-1491911889:104566..104639Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:104147..104265TCONS_00022325-exon-sc0000411-1491911889:104147..104265Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:103992..104053TCONS_00022325-exon-sc0000411-1491911889:103992..104053Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:103769..103860TCONS_00022325-exon-sc0000411-1491911889:103769..103860Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:103409..103512TCONS_00022325-exon-sc0000411-1491911889:103409..103512Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:103174..103275TCONS_00022325-exon-sc0000411-1491911889:103174..103275Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:102997..103036TCONS_00022325-exon-sc0000411-1491911889:102997..103036Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:102605..102739TCONS_00022325-exon-sc0000411-1491911889:102605..102739Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:102320..102461TCONS_00022325-exon-sc0000411-1491911889:102320..102461Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:101800..101947TCONS_00022325-exon-sc0000411-1491911889:101800..101947Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:101415..101663TCONS_00022325-exon-sc0000411-1491911889:101415..101663Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:100658..100805TCONS_00022325-exon-sc0000411-1491911889:100658..100805Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:100057..100110TCONS_00022325-exon-sc0000411-1491911889:100057..100110Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:99679..99786TCONS_00022325-exon-sc0000411-1491911889:99679..99786Clytia hemisphaericaexon
TCONS_00022325-exon-sc0000411-1491911889:98967..99475TCONS_00022325-exon-sc0000411-1491911889:98967..99475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000411supercontigsc0000411:98967..105881 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.81038	1.4158	2.04583e-05	1.13211e-05	0.513183	0.483645	1.20303	1.11356	2.52531	1.98926	1.72536	2.04379	1.31858	1.32079	2.08018	2.87882	3.71655	4.18328	1.20261	1.06523	1.7624	1.85843	2.51391	1.89854	1.50946	2.60099	1.19408	1.36162	1.79144	2.27911
Blast
[Close]
BLAST of TCONS_00022325 vs. Swiss-Prot (Human)
Match: DPH6 (Diphthine--ammonia ligase OS=Homo sapiens GN=DPH6 PE=1 SV=3)

HSP 1 Score: 304.294 bits (778), Expect = 3.498e-96
Identity = 150/259 (57.92%), Postives = 193/259 (74.52%), Query Frame = 1 
Query:   52 MRVVALISGGKDSCFNMMHCVYQGHEIVALANLQPEEK----DEMDSYMYQTVGHDVIDAYSEALGLPLYRRVIRGRSVNVQEDYQVVAEDEVEDLFQLLKKIKEEIDFEGVSSGAILSNYQRVRVEHVCNRLELKSLAYLWQRNQDELLDEMIAAEVTAILIKVASLGLKP-CHLGQTLHEMRQSLHRMKKECFLNVCGEGGEYETLVLDCPLFIKTIVIDESTVVTHEESNDVLTVAYKTFQKFHLREKLNVVEQQY 813
            MRV ALISGGKDSC+NMM C+  GH+IVALANL+P E     DE+DSYMYQTVGH  ID Y+EA+ LPLYRR IRGRS++ ++ Y     DEVEDL++LLK +KE+ + EG+S GAILS+YQR+RVE+VC RL L+ LAYLWQRNQ++LL EMI++ + A++IKVA+LGL P  HLG+TL +M   L  + K+  ++VCGEGGEYET  LDCPLF K I++D S VV H  ++    VAY  F + HL +K++ V   Y
Sbjct:    1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDLYAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKTLDQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIH-SADAFAPVAYLRFLELHLEDKVSSVPDNY 258
The following BLAST results are available for this feature:
BLAST of TCONS_00022325 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPH63.498e-9657.92Diphthine--ammonia ligase OS=Homo sapiens GN=DPH6 ... [more]
back to top