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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022358 ID=TCONS_00022358|Name=TCONS_00022358|organism=Clytia hemisphaerica|type=transcript|length=1153bp
ttcaaaagaccctCATGTTTTCCTTTACGACTATTTAAAAGAAAGGTTGG
GAAAGTAGAAAAGAAGTCTAATTGTCAAAGATATGAATAAATACCATATA
TACTGCCATTTTAGTAATTATGCATCAACGCGTCATTGTTTTATTTGCTg
gtgtttttaattattcaacatgataTAGTGATATAGCAAAAATTATAAAC
TCCACTGACTCCAGCATTAAGTTAATGACAAGATAATATTTAGTATACAT
GTTACCTAGTTATGCTTTTGTGCATACTTTGTGGGAACTTCCAAGTGTAC
GGAATACCAGAATACAGTGCAGGTAATTTTTTCTTGTAATACTGGAATGT
TGGTCAGAAATTTCTCAAATACTTCTTATTCCTTCTGTTTGGGCGAGGAC
GAACTCTGGACAACGGTCACGGTTTGACAAAATCACAAGAATACAGGTTA
AATGTAGAAAATAGTCAAAATCTAAAAGTAAATTAGAGAAGAAACTAAAA
TATGAAATACTTACAAAATTCATCACATAATATCTCTACGAAAGATATCT
CGCCACAAACAAATGCACCATatgcaaaaatccaaaatgattAGAACTAA
ATGCTTGAAAAGCTTCTAAAAGTTAAGAACGATTTTCTCCTGACACACAT
CTTGTCACTATCACGATTTGATAAGAGTGCATACAGAAAAGGCGAGTGGA
AAAAGCTTATAAAAAGAGCTACAACGTAAAAAACTAATAATTAAAAAGAC
TTTAACAATACACAAGAcgataaacaataaaaaagtaattcccAACGCAA
CAAATTGCCAAAACACCTTCAAATCCCACAAATAACAGTGTATATACCtg
cattcttttaaaaatattgacaatacCTCTCAATATAGGGTTACTGCTAA
TTTTCCTAGGAATGCCAACTCAATTGGCATTTTGGAAGCCCCCTAATATT
GTGGTGATACTGaaacttttaattattcaacCTGAAATGACATCCCTGAA
ATAAGtccagggttcgaattatagcttcgcacttcgcaaaatgcaaagtg
aattttagatttagcaaccaaaaaagattttctaactCAAAAATGCGAAG
TTAGAAAATACCTCGTGACTTTTTTCATTCGTtaatctattgctttatct
act Run BLAST on NCBI transcript from alignment at sc0000411:274128..275280 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022358 ID=TCONS_00022358|Name=TCONS_00022358|organism=Clytia hemisphaerica|type=transcript|length=1153bp|location=Sequence derived from alignment at sc0000411:274128..275280 (Clytia hemisphaerica)
agtagataaagcaatagattaACGAATGAAAAAAGTCACGAGGTATTTTC
TAACTTCGCATTTTTGagttagaaaatcttttttggttgctaaatctaaa
attcactttgcattttgcgaagtgcgaagctataattcgaaccctggaCT
TATTTCAGGGATGTCATTTCAGgttgaataattaaaagtttCAGTATCAC
CACAATATTAGGGGGCTTCCAAAATGCCAATTGAGTTGGCATTCCTAGGA
AAATTAGCAGTAACCCTATATTGAGAGgtattgtcaatatttttaaaaga
atgcaGGTATATACACTGTTATTTGTGGGATTTGAAGGTGTTTTGGCAAT
TTGTTGCGTTgggaattacttttttattgtttatcgTCTTGTGTATTGTT
AAAGTCTTTTTAATTATTAGTTTTTTACGTTGTAGCTCTTTTTATAAGCT
TTTTCCACTCGCCTTTTCTGTATGCACTCTTATCAAATCGTGATAGTGAC
AAGATGTGTGTCAGGAGAAAATCGTTCTTAACTTTTAGAAGCTTTTCAAG
CATTTAGTTCTaatcattttggatttttgcatATGGTGCATTTGTTTGTG
GCGAGATATCTTTCGTAGAGATATTATGTGATGAATTTTGTAAGTATTTC
ATATTTTAGTTTCTTCTCTAATTTACTTTTAGATTTTGACTATTTTCTAC
ATTTAACCTGTATTCTTGTGATTTTGTCAAACCGTGACCGTTGTCCAGAG
TTCGTCCTCGCCCAAACAGAAGGAATAAGAAGTATTTGAGAAATTTCTGA
CCAACATTCCAGTATTACAAGAAAAAATTACCTGCACTGTATTCTGGTAT
TCCGTACACTTGGAAGTTCCCACAAAGTATGCACAAAAGCATAACTAGGT
AACATGTATACTAAATATTATCTTGTCATTAACTTAATGCTGGAGTCAGT
GGAGTTTATAATTTTTGCTATATCACTAtatcatgttgaataattaaaaa
caccAGCAAATAAAACAATGACGCGTTGATGCATAATTACTAAAATGGCA
GTATATATGGTATTTATTCATATCTTTGACAATTAGACTTCTTTTCTACT
TTCCCAACCTTTCTTTTAAATAGTCGTAAAGGAAAACATGagggtctttt
gaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022358-exon-sc0000411-1491911889:274128..275280 | TCONS_00022358-exon-sc0000411-1491911889:274128..275280 | Clytia hemisphaerica | exon |
| TCONS_00022358-exon-sc0000411-1510915933:274128..275280 | TCONS_00022358-exon-sc0000411-1510915933:274128..275280 | Clytia hemisphaerica | exon |
| TCONS_00022358-exon-sc0000411-1575043694:274128..275280 | TCONS_00022358-exon-sc0000411-1575043694:274128..275280 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000411 | supercontig | sc0000411:274128..275280 . |
Blast
The following BLAST results are available for this feature:
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