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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022380 ID=TCONS_00022380|Name=TCONS_00022380|organism=Clytia hemisphaerica|type=transcript|length=1986bp
CATACACGTGACATTGATTGCGTCGGTATATTGGCAAAATCACGCGTTTC
ACGGGATTTCAAAACATACcatgttttattgaaaaaggaATGATGCAATT
AACTTTAACAATTTAATCATTTCTAATTAGCTCGTTTAGACTTCATTGGA
CTTTGATcctcaaaatgtaaacaaaacaggAACGAAATATTATGAactgt
tctgtaaaatacaacgtATGCTCTTTGCAGTATAAATGCGACTAGTTGTA
ACTCACATAAGAAGCTTTTAGTGTATTGTATTTATTTTCTCCAGAgagga
aagaagaaaatttaaagaagtttaaattttaaagaaacGAAAAGCtttta
acaacaacaacaacaaagatggtagcCAACCAGCAGACCACACCAGCACC
AGTCATGGTCGAACCAGCAAAATCATATTTCACTACTACTTTCATCAAAA
TGTTTTCAGCCGGAACAGCCGCTTCTATTGCTGAAATAACCACTATACCC
ATCGATACTGCTAAAGTGAGATTACAGaTCCAAGGAGAAAGCTCCACCAG
TATCGCCGAAGCAAGGTCAAGTCTCAAATATCGTGGTATGATACATTGTA
TTTTTACCATTTCTAAAGAAGAAGGCTTCAGTTCTCTTTACCGTGGTCTT
GTGCCTGGAATCCAACGTCAGTATTGTTTCTGCGGAGTACGTATCGGTCT
TTACGACCACGTCCGCAAAATGTACGGAGATACAAGTCAAGGAAAACCAA
AATTATTGGTCAAAATCGCTGCAAGTATCACTACGGCTTCTTCCGCTGTT
TTGATGTTCCAGCCTACGGAAGTGGTTAAGATCCGTATGCAAGCTGCCGG
AAAAAAATTGCGATACACGGGTACTTTAAATGCTTATCAAACGATTTTCC
GTCAAGAAGGATTAAAAGGACTATGGAGAGGGACCTCCACTAATGTAACA
CGTTTGAGTTTGGTCAATTGCACTGAGATTGTGATTTATGATTACATTAA
GTCGTACGCATTATATAAGAATTGGATGCAAGATGGAGTTCCGCTTCACT
TCGTGTCCGCCCTTGGCGCTGGCTTCATCACCGTCATGGTGGCGTCGCCG
GTAGATGTGGTCAAGACCCGATATATGAATTCCGCCACTGGATCATACAA
AAACCCAATCCATTGCGCCGTCTCGCTGTTGAAGAATAACGGAGTTACTG
CATTCTATAAAGGATTTATCCCATCTTTCACACGTCTCGGTTCATGGACG
ATCGTTTTCTTCTTATCCTATGAGCAAATCAAGAAGTATTTGAATGCTTG
AGAAGTAGAATGACTGAATGATACACGAGAACACAACTTTGCAAATGACT
TGACTATAATGGCAGAGCAGTTCGCTGGTGAAGACACTGTTGGGTTGAAG
TCAGGGAGAAGAGTATTAGCAGGCATTGGGTTCGTTAATATGCAACATCC
gttaaaaacatataaaaaagaaatcccTATCGCGAATTAGTCATTTGGTA
ATAAGCCTTGGTGATGGCTTGGAAtctgaatttgagaaaaaggtGTGAAC
AATTttaatataaatataaaaacgaAATAAAATGTATTTTCAGTGCCCTG
CTATGATTAAGCACGAATATATTTTTGATCTTGTGAGGGTATTATCTTCA
ATAAAGCTGGAATTTTCCAACtcgtgacgtaatcttttctaaGCACCAAA
ATTACCTCGCTAAAGTTTGAGGAAAGAAACCATTAGTTACGTCATAAAGC
TTTCCGACACCGAGTTTATATATGGTGCTTGTAGTCATATTGCTTTgtat
aactttttaactttttgggtgTTTTAAATCCAAgataaatttattatttt
atggTAAAACTTTTTCTATGATAATACCTTTTGTATTTATTGTCATTTGT
GTCTTGATCATTTGTCTTGATGAAGATAATAGATTAGTATAACACAATCT
TTCTGTGGCTGTGTATTTATAATGAGAATTTCGTGG Run BLAST on NCBI transcript from alignment at sc0000414:220093..232208+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022380 ID=TCONS_00022380|Name=TCONS_00022380|organism=Clytia hemisphaerica|type=transcript|length=12116bp|location=Sequence derived from alignment at sc0000414:220093..232208+ (Clytia hemisphaerica)
CATACACGTGACATTGATTGCGTCGGTATATTGGCAAAATCACGCGTTTC
ACGGGATTTCAAAACATACcatgttttattgaaaaaggaATGATGCAATT
AACTTTAACAATTTAATCATTTCTAATTAGCTCGTTTAGACTTCATTGGA
CTTTGATcctcaaaatgtaaacaaaacaggAACGAAATATTATGAactgt
tctgtaaaatacaacgtATGCTCTTTGCAGTATAAATGCGACTAGTTGTA
ACTCACATAAGAAGCTTTTAGTGTATTGTATTTATTTTCTCCAGAgagga
aagaagaaaatttaaagaagtttaaattttaaagaaacGAAAAGGTGAGA
TATGTTTCTAAGCTGGATTCCTCTTTCCTCgttgtttttttgtaagaaat
tttAGTACAAGGTTCTTTGCTAAcagaaaattataaataaagaaagggaa
atttttgggaaaaagcGTGAAAATTGATATCTACAAGTGAAGTCAAATTT
AAGAAGAATATATTTTCTGTTTGAAgaattctttgttttcatttcactat
gtttgagtttctttttctttttcatcttcttgaAAATATGTTTGCTTTCA
AACGGTTTGGAAGAACAAAATATGAGGaagaataaaaacaagaaaatacg
AAAAGGTGTGTCGTAGGAGGTTTAGGTTAGAGTTGAGAAGGAATTGTTTT
CTTATGTAGAaaagtttttcatgttttcctttttgaattattgagaAATA
ATAGACTTTCTGTTTTTCGATTTTGCTAAATGCTTTTTTTTTTGTGGTAG
AAATAAATTCATGTTGCATGCAAAAAGATAAACCAGGTACAGTAAACCAA
TTTAAAGTTTCTCTGGAGATTTtgaggttttatgactttatgaGGTGTTT
GGGGGGATTTTGCTTTTAAGTTTTGGATGAAAAGTTTATGATACTAAATa
cacccttgtgtcacagacccgccaGGACCCCAGCCCAGCCCCCAgccccc
actgaaaaatttccCCAAATATTCGTCCTcggtggaaaaataccctacat
ttCCAGCCCACTgggattgactttgatttcatccccaattaaaattcaat
ggaaaaaattgcactctaaaccatccccactggaatttttgatatgggaa
acaatagaatttcaatcttccttgggatttcaatagacaTTTTCATCCCA
AACTGAGAACAAAACTTTCACCACTTTCATCGagtaaaaatcgaaaaaaa
attgtgagaaagtctctctaagggtcccaaaacgCCAATTCTTCCTCTCT
TTAAGGcttgattttcgatttttggctcagacatacccgtcacctcgcaa
acctagttaCACCCCTAAGGTACTAGTACCTAGACTTTATCAAGTGAGGT
CAGCAATGAAAAGTTGACGATTTTGTTTTCATGCTTGAGTGTCCTGACAG
GGGGAAGTGGGTATTATTTTGTTTGCATAGATATCCTGtacaaaaaaagt
ttgtttacattcgtgcATGAGAAACCACACTTTGTTCTGTCTGACGAACC
TTTGTACTATCACCATAAAGTTCAAAGTTCAACCGGGAGGTCTGTCTgac
ttttttcatcaaaacgaGAAAAACTAGTAAAAAAACTAGGTTCGTACTCA
GTTGTCAATCAACTGAAAAACAATAGATTTTTCATCAAGTTGTCAATCAA
ACTCTTTTTCATCAGgaaattaaaaattgatgaTAAAAAAGGGGAGATAT
ATCGCTCTGTAGaatctttcagttaaataacaacAAAAATCACAGAAATA
GCACAATCTAAACCAAAATCGCCACAAAAACATATAATTTCATGTCAACA
TAAATATCCATTTATGTAAAATGTGCGTCATAGTaagaaaaatcgtcaaa
aaaggtaaaaaagaaaATCCTCGAAAACTTCTTATTTGATTTAAATCAAC
TCTACAGACCCGAGTGtctatagtctgaatcgcagacctctatagatatc
cTTCCTATAAGagacttttttcgctagaggatgagcagaagcctagattG
CCTATAGTTTATAGTTTATGCTTATAGTTTTACTTTCAAATACCATACTG
TGTACCAAAACTCCTGGAGACCACCTAAGATTCAAAGTTATCCCTTTCTT
TCTGGACAGACTGAATCGAGTCCCTTAAATTTCGATTAAAATTCCTGCGA
CATTTTTTGAAGGGGGGAATGAATGACCCGGAATTTACTGATAAATTTTA
TAAGTTTTTTAAACGCTTATGATTACCAGCATATTCAAGCTGAGTaaatt
caagcaaaaaaaataaaaaaatgctaaaaataaaatacagaAAGTTTAGc
ctttgaatgtttttgtcttCCCCTCTTAGAGTCAGTAGGGTGCTTGGTAG
ATGATTGTGGTACGTTTCTTATAGGAACAAACTATCATAAGAAGCTTTGC
Agtctctaaaacacccgatttctcaagaaaatggacaaaaatactcacaa
aatggtgaaaataagaacacgctaagaacatttttaggctttaaacccaa
aaagttaagaacattcgaagggttcaaaattaaaaaaatgtgtattccAT
GACTCGATGCTATTCTCGAAACGAATTAAACGGTTTCACCAATTCACGTC
AGCTTTAAACAGCATGGTGTTTTATGATTAAATATATATACTTTATTTAA
GTTTAATAGATTTAACCAACACCTAACTATTTCCATATGCGATGACGTCT
ATCGACTCCATATTTGAGTTTTGCAGTGTTTAAGAAGGATTTATGATTTT
CCAGCTGTCATCACGAACCAGCCATCTTGTGACGATTTTTTTCTAGATAC
CCTTAACCTTGGCCTGAAGACTTTAGTTTTAATACTAGATAGATAGATGT
ATTATGACTCTACAGGGCCCGCGCGACGGTTTTtgaaagtgagggggcca
acaaaaatatagtgactaaggaggagcaaccatggtttgcgccgacgggc
cggaaaattttcgattttgacctatcttatttggctaaaacagcttcctt
tttgttctgattttctgaaagaaaactgTTAAGGTGGCCATCCactggaa
attgaaaaatcgacctTTTAACTTTAAATGTTGATTACTCAATAACTAAA
AATGATATGGGCTTGAAACTTCCAGGTATTGTTATTTATGACCTAAagtt
aatattaaaaaaaaaataaaaaaaaaaaattggaagacgGGGGTTTGGTA
cgacttttcagaaaaatcaaaataatcttgTGTCAACGTTTAAGAGAAAA
CTACTAATACTTGGTTAATGATTTTTGGTATGTAGAGGCACTTTAGGACA
AAGAATGGAATgagcgaaaaaaaaatttgaaaaatccaaaatccgggggt
aaaagccaaaaaaacagttttttcaaaatatgagatCTGGAATTAGTGaa
atctgaaaaatccttcGCTCATTCCACAGCCCTCATAGATGTGCAAATAC
CCTGAAAAAATCAGACCAATCGGACAACTAGATCCTGAGATTTTTCCGCC
ACAGTGATTGGGAACTCCCGGATTTGCGTTTTGAGAAATCGTGCTTTTAA
AACATAAACTGCGGTTAAATGCAAAGATTATAGTTTTCAATAGggatttt
ttatgatttgagcCTATAAGGGAGTTTTCTACATTATTTCAAAGGAAATA
AGGATTTAAAACTatttacagtgaaaattttggccaatttgagtgacatt
ttgatcatttccagaaaaccgcaaaactttgaaaaaagaccGCAAAGCTC
ATTTTCACCACGAAAACCACCCCGAAATGTAAATAACAATGCCCGCATTC
ATTGTAGGACTATTTTGGACTATTCCTATCAGCAGGGATTAAAAACTAAA
TCAATTAagttaaaatattcattcaaaaagCTCTGGAACTGAAGACTCAT
TATCGTGGTACagggcactttcactttcactttcatgcCATCGCTGAAAG
CATAATGAAACCGCTAAAATCTAATCCCACACAGttgaaaaagtaatttg
aaGATGATTGTGTTGTTTTCTAAGAGATTCCTggcaaaaaaacattaaaa
tagcaCCCAAAAAAGAANCGAGGGCGGTCATTGTTTACAAAgtttgaaaa
ctgaatatgGGTACACCAAGCGACTTCAAACCTTCTATAAATGTTTCTAG
CGACTTGAAGACGACCCGTAAAGATTTTCTAGCCGTTTGAGCAGCTAGAG
AAGGTAGAATTGCTGTTTTACTAACGGGCGGGAAACAGGGCGTCAATGGG
CGaagcattaaaagcttaaaGGTAGGTATtctaaaacctaaaattttcta
cttattctttacttttgtgaattgaaattttcagaggttGTTCCAGAGAA
GTTATACTTGactttaagccaaaaaaataaaaaaccaccAAAAAAGTATC
ACTATTTTCAAACTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAATAATT
AGgtgaagagaaattttttattttgctttgcaaaaaagtgggggggggca
tggcccccccggcccccccggTGGCGCGGGCCCTGCTCTACACATATGTA
GAACGTATTTGGACGCCTTTTCAAGATACTTGTAGTTTCAATGCTCATGA
CAGTGATGTCAGTAAAATAAATCCATTGAGGTTTTTTTAACATGCATAAC
AAGACATTGCCGAGTTTGTGGATACTTCAACAAGTATGATGGTGAAATGC
agttaggcgagaccaatttgattagttgttttacgggctcGACCGACCCT
gaacttcaaaaaattgaaataaaaataaaattgattttgatactatcttt
ttattttcattgctttacagactacaaaatgttcaaaattgtGGTAATTT
TTCCAAGGNAATacaatctttttattttcattgctttacagactacaaaa
tattcaaaattgtggtaatttttccaaggttttgaaaattttatgtccaa
tttttcatttaatccATGAATTTCgaccatattttgcctaaaaattgtca
aaaattgtcaagaaaatgcaccgtaagggtcgatgtttcaaaattttctg
gcaCTGTAAAGGTTCGATTTCAGAAGCCTAAtttttgggccgcacgtatg
gtcgtttttgaatcgagtgcccccccccgggatacTGACATTACCCTAAA
AAAAGAACTAATCCTTAATACACGATAATATCATTTGTACGTGAAATAAA
AGGAATTCAAATTATAGTCAATGTCTTACTGAAAATGACTTAACAGAACT
CATTGATGGCTCGTTATTCGCTAATCGACTGACATTTCTAACACTGAACA
CACCCCTATGGTAGACAAATAaggaaaatcaaatgaaaattagCTAGACT
AAGGGGTTTCGTAATGCTGAAACACATCCCCTCTTTAACCTTAGCATATT
ATCTATGACGTGTAAACGATTTTCAACAAGAGCTCAACGGCGAAGCGTCC
TCTGTACACACCCccgtacaagtttttttttgtttgataatGAAATTATT
TCTGCGTCACGTGACGTTGACTTTCTTTTAATAAGAAGTCTGATGGACAG
AACGAAGGATGATTCATTGCAATAGACCATGAACAACAGACTTCGAGGTT
TCATGTTGAACGATAACGATTTTGagcttgttgtttttttgtgaatAAAA
GAAGAGAAGACACACAGAAATTTGAGACCAAGTCAATTACAAGGTTGgat
cattttttaatttgatatctTTTAAGTCTATAGGTCTATGGGTCACCTTT
GAGTCATGTAATTATTCCAGGTAAAAAACATGAGAATCGCAGTAGTTTTT
GTTCAGAGGTCAAATCAAATGAATAAAATGGTTATAGAAATTTAGAAGTA
GTGACATCTCATTTTTTACAGCATTAGATGATTTAGGGCCGTCGAGCACC
ATTACTTTTTTTCTAATCCAGGGACTGGTTTCGAATCTAGGGGACAGTAA
GGAGATCAGTAGATTTGTTTTACTGTTTTGTTTTACTGTTTTACTGAAAG
TTCTGGACTATTTGGGAACTAAGTTCAGCATTGTCCAAGAAAGCTTCtac
aaaaatcaaattcaactttgaaaaatgcGATCGACAAAAACTGACAACAT
GGCCTTTTCTCTAAGTTCCAGGACTagaatccaaaagttcaagttGAAAA
AAGTGGAAGTGTATGGGTAGCAAATGTTTTCTAATTTCTTCGAGAGAAGT
TATACCATTGCAACgaattttattacaaaacaCTGTTTATTAATATCGAA
ACTTCATCAAAATTCCTTGTTTTTCATTATAATAAATGAAGTTATCAAAG
ttctataaaaatatatatttcacAACATTTGAACGCATTAGAGGGCTTAG
TAAGAACTTGAATGAGGCTTATGTTTTGAAGTAAAAATGGTGTGCAAATG
ACGTCAACAGCGACGGAGAGATCGATTTGGGACACTGAGCGCTTGATAAT
GGTCCTTGAGGAACTTCTATTTTGTTACTAGTGAAATGTTGGCAAACCAA
TGGTGTGAGATAAAATGGGGCTTTCATGTTTATAAACGACGTGGGAAATC
ATAGGATTTTCACAAGATTTCGAAAGAATAGCACCATCATTTGTGAAAAT
GGGGTAAAACTAAAATTATtgacaaatatttttgtctttGTCAATCGATA
ACTAGCTTATTTGCAAGTTCTTTTCAACGTACTTCACAATAAACGCTTTT
ATATCATTTTAAAATACCAtctcaaaaacattattatcaATGCTAAAGTG
ATAATGCAAAATTTTTATATACGTCAGGAAGTGTATAATTATCTCCTAAT
ATCCTGGATCATAGGTTAATTAGAGTTAATGAGTTAATCAGAAACACACC
TCTAGTTCACCCTTTTCTACAACTGAGCTATTAAATCACAACATGaacga
aaaaagtttaaaaagactGCTTAGTAACGCAAATATTGTTTTGATAGCAA
AAAACTTATATTTTGCATTATCAGTACGATTACAGATTACAAGCAATTTA
TTGGGTCTTGACTTTCCGCTTCAAAATCATTTAGTTGTTTGCAGATAGAT
CTGGATAGATTTTGATTTATGTGATATTCTGTCCAGGGAGGTCAGTGGAA
AGGCCTTACGTAAGATAAATAAACTTTATCGAAGGCCATCGGGTACTACT
GAGGTTTCTCcgtgtttttattttaaaaaatgcattcggggtggaaaatt
tctttgatttatgTAATAggtgaattctattgtttcagacTCAAAGATAA
GGTCGGGATTCCAAAGTTTTAATGCTTCTGCTAGTAGGAATGAAACCATT
TTTTGTTTCCAATTTTTACTGGCGTATGGCCGATACTTTCGTCAGAGAAG
GGGTCCCATACGGTTGTGACAAGGGTCAGATCTGAGTTTGAACCATGAAC
TTTACTTAGGAGGCGTATTGAAGGTTTGTTAGAGGTACATACTTTCCTAT
TTGAATGCTTCATACTCTTTATTTGTCGCTGTGAAATATTATgcctgaat
tttctttttccgGAAAATAACAAACTCCTGAATTTGCGTGAAAAAATAAA
TGTCAATATTAGCAACAGCTATCATTTAAAATCTAAGGATTGCATACTTG
ACATGTCATACGTGATGGAGATTATTTTAGAATATAAATGTCTTGGGTTC
TGGGTGAAATCGGCAAGTTTTATCTCGAAATTGGTAATTTTAACTTAACT
AATAACTAACTTCACTTTAAGATCTTGAGAGGGGCTCAATCAGCCGTATA
AGCAATAATCTATTATAGTTCTTTCaagttttgagcaaaaaaattagCTG
TAATAAAGCTTGATATTCTGACATTCTAAGAGGGCTTTCTGAGAACTGAC
AAAAAGTAGAATGCTGAATCGCTAGGTTGTTTATAATTTGGTGACTTAGC
TTTCGTTTTCGTGTtataaaagtaaaaagaatTCACCAACAAACGAGATG
ACTTCTCTGAAAAAATATCCCTTTCAAAACGCTACAAGACTTTCTCTTCC
GTTTTTGTTCAAGATAAACTAACAATCAACGTCAAACCGAAAGTTTATGT
TACAGAAACTAACATTTCGACTTCCTCCCTGTTTTTCTAGCttttaacaa
caacaacaacaaagatggtagcCAACCAGCAGACCACACCAGCACCAGTC
ATGGTCGAACCAGCAAAATCATATTTCACTACTACTTTCATCAAAATGTT
TTCAGCCGGAACAGCCGCTTCTATTGCTGAAATAACCACTATACCCATCG
ATACTGCTAAAGTGAGATTACAGGTAGGTCTCAGCTTTactttacacccc
tgtctcacactGATCTTCTCTTTACTAAATGTAGCTAACCAACATTGTAt
gaagtaaaaatctttcaaataggTGGGGGACCTTGATGCTGACATATTGC
TTAACCTTTTTATAACCTATGTGTTTCATACTGGCAAGAATCTCCTATAT
CTCCCAACATCTAATCCTTTTCTTCAAACTTTGACTCTTAATCTAATAAA
TTAGCCAAACCATATTAAACTAACACAtgtgtatttttattttacataga
TCCAAGGAGAAAGCTCCACCAGTATCGCCGAAGCAAGGTCAAGTCTCAAA
TATCGTGGTATGATACATTGTATTTTTACCATTTCTAAAGAAGAAGGCTT
CAGTTCTCTTTACCGTGGTCTTGTGCCTGGAATCCAACGTCAGTATTGTT
TCTGCGGAGTACGTATCGGTCTTTACGACCACGTCCGCAAAATGTACGGA
GATACAAGTCAAGGAAAACCAAAATTATTGGTCAAAATCGCTGCAAGTAT
CACTACGGCTTCTTCCGCTGTTTTGATGTTCCAGCCTACGGAAGTGGTTA
AGATCCGTATGCAAGCTGCCGGAAAAAAATTGCGATACACGGGTACTTTA
AATGCTTATCAAACGATTTTCCGTCAAGAAGGATTAAAAGGACTATGGAG
AGGGACCTCCACTAATGTAACACGTTTGAGTTTGGTCAATTGCACTGAGA
TTGTGATTTATGATTACATTAAGTCGTACGCATTATATAAGAATTGGATG
CAAGATGGAGTTCCGCTTCACTTCGTGTCCGCCCTTGGCGCTGGCTTCAT
CACCGTCATGGTGGCGTCGCCGGTAGATGTGGTCAAGACCCGATATATGA
ATTCCGCCACTGGATCATACAAAAACCCAATCCATTGCGCCGTCTCGCTG
TTGAAGAATAACGGAGTTACTGCATTCTATAAAGGGTGAGTTggactttc
tttctttttcgtgTAAATAATGTTGgggaaattcaattttttaatcaatt
ttctcttTTGCACTCTGGACTCAAAATAGTTTGAATAAGTAGACTGCTTC
GTTGCCGCAGCAAAGTATTTGTGAAATATCTAGATTATAAGTTGATTTGA
TGCGGTTTAATGATTATAATTTATCAGGAAACACATTAAAGACTCGTCAG
AATGTCCTGTGGTTTTGAGTGTTGATAAATTTACAAAGTCAAATTTGATC
TCAAAGTGGTTCGATTCGTACATTCGTCGCGCAAAAGAAAGTGAACTAGT
GAAAAATTATGTGTTTGAACTTTGTACTGATTCTGTCAACACAAGGACAT
GGCTCAAACATACGGAAGAAAACCAGCGTAGGATCAATAAACAGTAAAcc
ataaagaaaacaaaaacaaataacCACAAAAGAGAACCCGGTCAATCGAC
ACTCCATGTTCGTGACGCAAAACAACCTATACTATGCAAGTACTGGGGAA
AATTTGCGAACAAACCGTTTTGATAAAAGCTTAGTCACGAATATGTGCTT
TTTCGtacatcttttttataagaacaagctatatgAGCATTAGGCTTCGA
GTACCAACAAATTTAGGAACATGTTTAAAGAACATTTATGTCCCCATTTA
TAGGCTTTGCATAATCTAAAACATGAAACTGAAAGATAAAgtcaaaatta
ctttttaagaTACTAAATTGGATTAAAATGTCTGATAGCTTTCTTGTGCA
GTAACCCCGGAGTAACCCTGGGCGAGGCAAAAAGCAATACTCTTTCTAAT
CTACTTTGTACTGTTATTGTCTGCCTTAAGATTANTTGGATTAAAATGTG
TGATAGCTTTCTTGTGCAGTAACCCCGGAGTAACCCTGGGCGAGGCAAAA
AGCAATACTCTTTCTAATCTACTTTGCACTGTTATTGTCTGCCTTAAGAT
TAAGCAGAGCTAAAAATAACGATTTTTTGATTAAATTCAATTACCTTATG
ACATGTTGTGAGAATACTAGTACACTTTCAAAAGGCGAGTGTATTATGAT
AACACTTGACCTCTAGCTTGAGATTACACGTGACCTCTAGGCTTGTCGAT
TTGTTTCCAAAGTttccaaagtttcaaaaaggTACTTCCCGTCTTGAATG
AGAATTGGCAATAGTAAAACAATAAACATTGCAGCTGCCTTAATAATTGA
GCAATCCGAATAGTACTTTTGGCAGCATATACAGGGGTTGGTCCCTAACA
CAAAGGATGcctgaaaaaagtagaacatcTTAATATCTTTTTGGGATATT
CAGTCCGATTCAATGTGAATTTATGCTGCAGGGTGCATTAAAAGCACATC
TCCCTGGTTGACAAGGGTAGCAACCCTGTCTGTCGaggtaacttttattt
tagtgaaatcttCATCTTACCTGATTAATTTTCTTTCGTTTAGATTTATC
CCATCTTTCACACGTCTCGGTTCATGGACGATCGTTTTCTTCTTATCCTA
TGAGCAAATCAAGAAGTATTTGAATGCTTGAGAAGTAGAATGACTGAATG
ATACACGAGAACACAACTTTGCAAATGACTTGACTATAATGGCAGAGCAG
TTCGCTGGTGAAGACACTGTTGGGTTGAAGTCAGGGAGAAGAGTATTAGC
AGGCATTGGGTTCGTTAATATGCAACATCCgttaaaaacatataaaaaag
aaatcccTATCGCGAATTAGTCATTTGGTAATAAGCCTTGGTGATGGCTT
GGAAtctgaatttgagaaaaaggtGTGAACAATTttaatataaatataaa
aacgaAATAAAATGTATTTTCAGTGCCCTGCTATGATTAAGCACGAATAT
ATTTTTGATCTTGTGAGGGTATTATCTTCAATAAAGCTGGAATTTTCCAA
CtcgtgacgtaatcttttctaaGCACCAAAATTACCTCGCTAAAGTTTGA
GGAAAGAAACCATTAGTTACGTCATAAAGCTTTCCGACACCGAGTTTATA
TATGGTGCTTGTAGTCATATTGCTTTgtataactttttaactttttgggt
gTTTTAAATCCAAgataaatttattattttatggTAAAACTTTTTCTATG
ATAATACCTTTTGTATTTATTGTCATTTGTGTCTTGATCATTTGTCTTGA
TGAAGATAATAGATTAGTATAACACAATCTTTCTGTGGCTGTGTATTTAT
AATGAGAATTTCGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022380-exon-sc0000414-1491911889:220093..220436 | TCONS_00022380-exon-sc0000414-1491911889:220093..220436 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1510915933:220093..220436 | TCONS_00022380-exon-sc0000414-1510915933:220093..220436 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1575043694:220093..220436 | TCONS_00022380-exon-sc0000414-1575043694:220093..220436 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1491911889:228833..229015 | TCONS_00022380-exon-sc0000414-1491911889:228833..229015 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1510915933:228833..229015 | TCONS_00022380-exon-sc0000414-1510915933:228833..229015 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1575043694:228833..229015 | TCONS_00022380-exon-sc0000414-1575043694:228833..229015 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1491911889:229292..229977 | TCONS_00022380-exon-sc0000414-1491911889:229292..229977 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1510915933:229292..229977 | TCONS_00022380-exon-sc0000414-1510915933:229292..229977 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1575043694:229292..229977 | TCONS_00022380-exon-sc0000414-1575043694:229292..229977 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1491911889:231436..232208 | TCONS_00022380-exon-sc0000414-1491911889:231436..232208 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1510915933:231436..232208 | TCONS_00022380-exon-sc0000414-1510915933:231436..232208 | Clytia hemisphaerica | exon |
| TCONS_00022380-exon-sc0000414-1575043694:231436..232208 | TCONS_00022380-exon-sc0000414-1575043694:231436..232208 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000414 | supercontig | sc0000414:220093..232208 + |
Blast
BLAST of TCONS_00022380 vs. Swiss-Prot (Human)
Match: UCP2 (Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 4.346e-97 Identity = 157/291 (53.95%), Postives = 201/291 (69.07%), Query Frame = 3
Query: 435 TTFIKMFSAGTAASIAEITTIPIDTAKVRLQIQGESSTSIAEARSSLKYRGMIHCIFTISKEEGFSSLYRGLVPGIQRQYCFCGVRIGLYDHVRKMYGDTSQGKPKLLVKXXXXXXXXXXXVLMFQPTEVVKIRMQA---AGKKLRYTGTLNAYQTIFRQEGLKGLWRGTSTNVTRLSLVNCTEIVIYDYIKSYALYKNWMQDGVPLHFVSALGAGFITVMVASPVDVVKTRYMNSATGSYKNPIHCAVSLLKNNGVTAFYKGFIPSFTRLGSWTIVFFLSYEQIKKYLNA 1298
T +K AGTAA IA++ T P+DTAKVRLQIQGES + A +S +YRG++ I T+ + EG SLY GLV G+QRQ F VRIGLYD V++ Y S+ + ++ A TT + AV + QPT+VVK+R QA AG RY T+NAY+TI R+EG +GLW+GTS NV R ++VNC E+V YD IK L N M D +P HF SA GAGF T ++ASPVDVVKTRYMNSA G Y + HCA+++L+ G AFYKGF+PSF RLGSW +V F++YEQ+K+ L A
Sbjct: 12 TATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPV-RATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE-HASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA 300
The following BLAST results are available for this feature:
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