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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022420 ID=TCONS_00022420|Name=TCONS_00022420|organism=Clytia hemisphaerica|type=transcript|length=1180bp
ATTTATCCAAAGCGAGTTTCAAAGTATGACCTTATTTACTTAGGAATTAA
GGAAATTACAATTTTTCTATTCGTTAAATATAGAGCAGGGTGGCGGGCTG
ATTTCTGCGTTGGAAAGATACATAGAGTTCATCAGTTTTGGGATTTAGAT
TTTGGAGCAGATTCACATAAGCGTTTTACGCTTCATACAACAATGACGAA
GTTTGGTTTGATATTGATAgttttcttttgcaaattttttcatatttttg
gacAAAAAGAATTTAGGTTGTCTaagGATGACGATCTTGTACCTGGGTTC
GACGATAGCTCTGTCGGAAGAGATTTGATTCGAAAAGCATGGATACATAT
TCTGAGACAATCTAAGGAAAAGATGGATCAAGATGTATCTCTGATAGAAC
CAAGTACTGAGAAATCTTTACATCTTTCAAGCACAATTAACCCAATTAAA
TCGATGTCTCGGCAGAAAATATTGTTGGCTGCACTCTTGCGACAAGAACA
ATCAAAGCCAATCCTCGATGACAATACACGTCGCCAGCGTGCCGCATTTC
TTGCTCCAATCGTCCCTCAAGCGTTATCTGGCTTCACGGTGACTTTGAAG
AAATCAATATTGATACCGAAGAAGAGATTCACATTCCTAAGCGAGTTTAC
GGCCTCAAGTCCAGAATCCTTTGTTCGTGGAACTGGCCTTGATATGCGAC
TCGGTCGATTCACAGTGCCTTATACTGCGATGTATAATTTCAACGCAAAT
TTGAACATCCATCGTCCGTTAAAGATGAAGAAGGGCGGAGTGGGCGGACA
ATTATCGGACGGTGTGACTGCAAGGTTGTGTATCGATGGAGAATGTTTTA
GTAACATAATGAAATTTCGATTATCTACATCCTCCAATGCAAAATCATTG
ACCATCAATTTTTCAGGGACTTTGAAATTGAAGaaagACGAATATATTGA
GATAGTGGTGGAGAACGCTTTATCAACCAGGATTATCATCACGGAAGCAT
TGTTCAGTGGTTATCTTGTGGGTTCGTGATTTATCAATTTATCAAAGCTT
ATCTGTATAATACACGGATTGCAAAATTAAAAActgtctgaagacaaatc
acgcttttactcaaaatttttatgtgctcgttacatgacatttatttctg
gttGTTTCGAATTTATCGACATTAACCCAG Run BLAST on NCBI protein sequence of TCONS_00022420-protein >TCONS_00022420-protein ID=TCONS_00022420-protein|Name=TCONS_00022420-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
IYPKRVSKYDLIYLGIKEITIFLFVKYRAGWRADFCVGKIHRVHQFWDLD
FGADSHKRFTLHTTMTKFGLILIVFFCKFFHIFGQKEFRLSKDDDLVPGF
DDSSVGRDLIRKAWIHILRQSKEKMDQDVSLIEPSTEKSLHLSSTINPIK
SMSRQKILLAALLRQEQSKPILDDNTRRQRAAFLAPIVPQALSGFTVTLK
KSILIPKKRFTFLSEFTASSPESFVRGTGLDMRLGRFTVPYTAMYNFNAN
LNIHRPLKMKKGGVGGQLSDGVTARLCIDGECFSNIMKFRLSTSSNAKSL
TINFSGTLKLKKDEYIEIVVENALSTRIIITEALFSGYLVGS Run BLAST on NCBI transcript from alignment at sc0000417:95105..107391+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022420 ID=TCONS_00022420|Name=TCONS_00022420|organism=Clytia hemisphaerica|type=transcript|length=12287bp|location=Sequence derived from alignment at sc0000417:95105..107391+ (Clytia hemisphaerica)
ATTTATCCAAAGCGAGTTTCAAAGTATGACCTTATTTACTTAGGAATTAA
GGAAATTACAATTTTTCTATTCGTTAAATATAGAGCAGGGTGGCGGGCTG
ATTTCTGCGTTGGAAAGATACATAGAGTTCATCAGTTTTGGGATTTAGAT
TTTGGAGCAGATTCACATAAGCGTTTTACGCTTCATACAACAATGACGAA
GTTTGGTTTGATATTGATAgttttcttttgcaaattttttcatatttttg
gacAAAAAGAATTTAGGTTGTCTaaggtaagaaatattttttattggcTA
CAATATTTTCACTGTTGAATCTGTTTTGCCTTTATTTCTTATgctaccgg
gtgtcccagaaaaaaggtTGAATTTTCTTGCGTTCAATGAACTTTTAAAG
AATCAATCCTATTTTGCATTGGAAGAAGGAACAAGAAGCCGAAGCGGCAC
GAAGGCCCAGCGACATAGCAATAGACGAATGTTTGTTCGCAACGCGTGCA
CTTCGTACCAGAAATCAAAGTTTTGAACGTGCAGTAATTTTCGCGAGGCA
ATTTGTTTCAGAAGTAATTTAATTTTagcgggacttattttcgcgagcat
gaaaaatgtaaattttcgcgaggattaatTTTCACGACTTTCGCGAGAAG
AACGTATTTCTTTCGAATCATTCATAACAAATACCAAAGGAAAGAACGGA
AAACCTATAAATATTCAGgctatattcatgatattcatgacgtaatcttt
tgtACAGAGGCACCCTAAAAAGCCGGTTGTTTGccaccaattttgaaatt
ataacaATTAAACTAGAGTCTTAGAATCCTAATGCACATTTTCGGCAGAG
ATTTAAATACggaacattcaaaaagttaaaaaagttcgaaaattggctga
atgaaaaaaaaaggaaagaaaccagctgcgctggaaggtcagggGAAGGT
CAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNACTGAGTTCTTAGATCTATTTTGTCGCTTACTTTA
CCTCTAGCCACCAATAGTACTTGAACCTTAGCCTAGTCTAGCTTATAACA
TtatgttagtattttttttaaatatactcgttaattttttataatagcaC
ACATTGCGATGGCCTCAGCTAGCATACTCAGATACTCggatttttttagg
ttttagTCTAGCTCTATCACTATTCACATTTTACCCCTCATACTTTTTAA
TCCTAATCATTTTATTTCATCATACTAGCCCACCGCTTTACAGAATTTTC
AGGTGaagagccaaatgtaaattttggaaatgccagaaatatatcattat
tattattattattattattattacaacataagtttacttgaaaaaattct
ctgtcaggtttgaaaaatccagccaccgaccgtttagagcgatagataaa
aaattgtccattttcacgggttgcaccatgaaaaacattccaaacttatt
caaaatgagctgcattttattatcatttaatgaattacaacataagttta
cttgagaaaattctctgtcaggtttgaaaaatccagccaccgaccgttta
gagcggTAAATCCAAAACTGACCATCTTCAAAGGGTAGCataatgaaaaa
cattccaaacttattcaaatttacacatgagctgcattttagtatcattt
aatgaattacaacataagtttacttgaaagaCTTCTCTGTCAAGcttgaa
atataaaactctAACATCCAAATGCTCCCACTTGCTCCCCTCCCTGACCT
GACTCCATCCATcttgaaaaccttaaaaaatactttgccataaagagaat
gaaatttgactttactaCCAATTCTATCCAATATAAGAGTAGGTCANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNct
ggacttgttaatttattgcgcgcacaggctccgacaaaaccaaaatcttt
tcgttcagttgctttttaaaggcccactTGCGCTGCGCGGCTGGGCCAAA
AATAAACTTGGAAAGTTTGAAGGgtcatttgtcaaatttggtttACTAGA
TAAAAGGTTACTAATggcctaaatgctaaaacattacttttcgaaaaaaa
atcttaaaatctgaaaaacgaATTTGTAGATAGAGACATCATCGGACGGG
GTTTCTAGCCTTCTTTCGCACTAGGGAATTTGTCTACAAGCTAACCCGAA
GGCAAGCAGACAGAGAAAGCGAAACTTATCTTTGTATTGTTAACTATTTG
AATTGGGCTTCCAGCATCTCTTCGATTTGTTTTGTTATAGAtaagggata
aaaattctggttaGACGGGATTTTGAAACTGCTTCCAGAGTTTGTATAAA
GTTCAGTGAATGAGAATCGTCCTCTAAAAACACAGTCGCTGAGTAGTTTT
TCGCTCAGCAAGTTTTTAAGGAATCGTTAATGTCATTCAGCAATGACGGA
GGTTATGAGCCTATTTAAATTTGGAGTCAAATGTTAGAAAACAAAGGTTT
TCCCAACAAAAAAAACTTGCTTAGAAAAGAATTGCCAAAGATAATAGTTT
TTCAAGTCTGATTTTCATCCCTTACAACAGACATTAGCgggtttatgtat
tcgagataaatcgaaggagacggtataaagcaaagatGACATATCGCAAA
AAATCGCCGctcactttgctcgacgacggtaaagaCACCAAAATCCGTGT
CGGCTGTTTAGGTGAGTAAAtacgatatagagccgtacatcaactacaGT
ATCGACTTAGTTTTGTATCGGCTTCACTTACCGTCGTCCTCGATATCCTC
CTTTATTAACTCGCTACTAGTTCAGGAGTGCAGGTAGTCTAGGTTAGAAT
ATTTAAAAGTGTCATTacgcaaacaaagattacaGAAACCCTTATAAGTT
CCTCCTTTTGTGAAATATTCATCGATAAATGACTTAACTAATAAATTTTC
TAGTGGAGATCCTTATAGATTTTAGCATCCACTAACGTATGCGTGCTCCT
CATAGACCTATATACTAcatggggttttgtagaggtctgcgattcagact
agaggGGCTCGGGAGGAAATTAAATTAGCCCCACCAGCAGCCCTTTTTGG
GGGAGCGCAAAAAGACAAGAGCCCCGCAAAAAAAGCTGGGGGGTGGAAAA
AATCTGATTACGAATTTCGGCACccctttgcttttttaaaccgtAAAATT
AACAGTTTTCAGCAAAAAGAGAAACAAATACCCAACTAATTTTTTCTCGC
TCTCTTCAGTCACGTATTTTTTACAGAGAAcatattttactttcaaaagG
GGAAAACGAAATGTTACCTTTGAAAACTTGCCTTCCTAGTATGCCCAATA
TTGGTCGATATACCACGCTGCTGATATATTTTTTACTGACTACATTCTTC
TCACTGTTGAGCTTCTTTTGCTACGACGCTactgataaaaaaattttgat
ttttctcataGGATGACGATCTTGTACCTGGGTTCGACGATAGCTCTGTC
GGAAGAGATTTGATTCGAAAAGCATGGATACATATTCTGAGACAATCTAA
GGAAAAGATGGATCAAGATGTATCTCTGGTAAGCCATAAACATTTCTGTC
GATTTAAAAACAACCTTATCTGCGGTCCAAAATTAGACCTTTGAAATCTA
GGCCGAGTGCAGAATAAATCTGCTCACGTTTGAGGAAATTTTCTTTGTCC
TTTTGAAggcaaaaaatggtcagatttttcaaaatgttgtccgataaaca
tcttttttgctcactttttttTCACCCTTTGAGTGCACTTTCACTCATCT
TCGCTCATTCtgacccttagagtgcacttcAAGGAGACTAAAAAACGCAT
AAGCAAAAAACCAAACCTATAACATATTGACAAACTTTAGTCAAAAGTGA
TCAGACATTGCAACATTCCAACTTTTTGGCAAATAAACCAGCTTTAATAA
AGCCTTGAAtagttcttattttgttctcaATTTGAAGgtaattttcagga
tttttttaATTCCTCTTTTCAGAGTTAACCATCTTTATACGAGGCTTATA
GGGgtggttcaaaactaggggggctgttcctgtaccaccctttaactttt
gatctagtgggtctttgtctttttgaatgaaatttggaggtaacttttga
caaaatctttCACTCATCATGcctaaagtgagcaaaaacccgAAAATTTC
TTTGCTAAAAATTCATATCAATCCCAGGTTGAGGAGTGTTCTTACATTGT
TCCTATTTCTTGATGTCTTTTAgccttattgttcttataaaattactCTT
ACATAATAAAAAGAGTAAAGAGCTATTTAATGtcaatatatgtttttttt
tcttcccacTACAGATAGAACCAAGTACTGAGAAATCTTTACATCTTTCA
AGCACAATTAACCCAATTAAATCGATGTCTCGGCAGAAAATATTGTTGGC
TGCACTCTTGCGACGTACGTGTTCAttcccaactggcacacaacattgtt
ttaacgtttatctaacgttcacaacttccatttaacgttagattaacgtt
gaaacaacgttgtgtgccagcttaaTTAAGTCTTCATTTGAAATCGGATT
TTCTAACACTTTTTATGAAATATCTCTGTGAAAACCAAACCGAAATACTG
GGTGGGTAAAAAAAAAGTACTCTGAAATCTAAAAGTCCTGGGTACTTGCT
GAAGGATTTGGagaaagataatgtttttttggaaagttatAGCATTTTTA
AGATGACATTTGAGTTATGCAAAAAGAATTTCCTGCAAAATTATAAAAAC
CGCAAGTAGTTTTTGAGTGCCTTGACTTATACTCCCTCCTCACTCACTCA
CTCTCAGGTCCCTCTAACTTAGAGTTGGAAAGTACTCGTCCGAACTGTAA
ACTCTGTAAAACGCTTAAATACCCAAAATGCCAGAAACCAAAAGCAAGAC
TCCAAGTTTTTGGTCTTTAAACAATAAAACGGGTGGCGAACGCCCAGACT
ATTTTGGGATCTTCCGTAGAAAACATATGATGATATACTagtagaccttt
tcataaattacgtcacttgcctcgtattcaaacaattacagTGGTAATTC
TGTTCCTTGAGACATTAACTGATTTTTaaaaccctattcggcctaggggg
ggctctttctgttcggaggtcaaactattggtaatagtttttgaaataat
aaagctattgccgtgaaattttctgtaaattcctaacttttatttagctt
caaaataaaaaaaaatttgacacctaaatattttcacaccttgagcatga
tgacatttttgacagtaaggtgtcacaaaaattgacacttttctaataca
aattcatttttgatgtcaaatatatcatttaaaccgtaatatattgaata
tttaggataaaataggcattttaaactcagacaacttttctctaaagcct
ttgttagagtacaatagctatttataagaacaaaggaaattttcggtttt
tgctcactttgggcatgctgagtgacgtcatcgaaaaatttttttgtcaa
aagttaccttacgtgacaaggatcttgtgtgccaaatttcatccaaaaag
acctactagatcaaaagttaaggggtggtacaggaaaagccccccctagt
tctgaaccgcccctaaaagcctaggttgaatagggttaatgaATAGAAag
cagttttaataaaatccgttgggagttaatcaccatggcaataatttcaa
aacgaggcaagtcaTGTTTGttacgtaatttatgaaaaggtctgtTGCTT
TTTACTAGAAGAACAATCAAAGCCAATCCTCGATGACAATACACGTCGCC
AGCGTGCCGCATTTCTTGCTCCAATCGTCCCTCAAGCGTTATCTGGCTTC
ACGGTGACTTTGAAGAAATCAATATTGATACCGAAGAAGAGATTCACATT
CCTAAGCGAGTTTACGGTAAGTTTTTGTTGTTTCAAAAATAACGACTGTA
CAATCTGGTTCGaaatatattgggaattttggttatttctttgttttctt
ttaatttgaagttcgggcgagaaagtcaatTTTGGGCTATCTGTCAAATG
TTATCGGataatttcaatttgggaggggtttatagacttccaggctatat
tctgagccttactggaccatttttgaacttaaggatcctcagatcctaag
gtccaaAGTCTTTCTAATTGTTTGTAGCTATAAAATTTCGtggggatttc
ccttttttctcaaatttcatgAACTTGATTGTAGTGCAAATGTGTAGCGG
TCGGCAACGGTACGCAAGGGCGTGGGCTCCATCCATGGTCGGGTTACACC
AAAGACATCGTACTGCTTGATGTTTAGAAGAGAAGGATCAAAGAGAAGTT
ATGTAATCAAGTGAGAAAGAGTGGCAACCTCCTTTATCTTTGAGTAGATA
AAGCTATCGAAACAGGAGTCTCAGGTTGCCTCCGACTGTGGGtgcagatt
tcaaatttttaaaattatagaTAAGTTTACAAGCTAACGTTTTACAAATA
CGGAtgcatgttttgaaaatgttgtatattttctttgtttatgttCTAAA
TTTAAGCAAGCTTTGCTTCTCTGCTCACCAACAGCGATTGCGCAAAGCTG
AACACTCAGTGTGACGGCTGCAGCCTATACTCGCTTATTCGAGCTGCACT
GATGAGTCCCGGGAAAGGACAAAACGCGTGTCTGCGGATAGACGTATTCT
AAATATATAATGATACATGGCCATAATTACATTTTAGGCCTCAAGTCCAG
AATCCTTTGTTCGTGGAACTGGCCTTGATATGCGACTCGGTCGATTCACA
GTGCCTTATACTGCGATGTATAATTTCAACGCAAATTTGAACATCCATCG
TCCGTTAAAGATGAAGAAGGGCGGAGTGGGCGGACAATTATCGGACGGTG
TGACTGCAAGGTTGTGTATCGATGGAGAATGTTTTAGTAACATGTAAGTT
AATTTCCTTGTCACGAGTCCCCGAGGAAATTCGGATATTATGCAATTTTC
TAACAAGCTAATCTCCAAGCATTCTGATTTAATTTTCTTATCGAGCTAGT
CTTTGAGAGTATTCTGAAAGATNCATTCTGATTTAATTTTCTTACCGAGC
TAATCTTTGAGAGGATTCTGAAAGATACTTTATGATTTTCTCAATCAGCA
AATTTTTGTGCAGCTTCGAATACTTAATAATTTTCTTGCACAATTAATTC
TCGAGAGGATTCTGAAAGATACTTAATTTATAATTTTCTCAATCAGCAAA
TTTTTGAGTAGATTCGAATACTTAATAATTTTCTTATCGAGCTAGCATCC
GAGCAGATTCTAATTGCATGGCTATAAACTATAAAGGCCATGGCTCCGTA
AAAAAATCTGCCCAGGTTGGCGGACCGCTTTGATCATTTTCCATCTATAT
CTAGGAGTTTATATGATTCTTTTAGCATTTGGgttttgataactttttat
GTAATACATTTGTATGGctgcaacgttgtttcaacgttcatctaacgtca
tatggacgttttgaacattagataaacgttgaaacaacgttgtgtgccaa
ttGGGACATTTGTATGGCTGCAATAATGAGCattttaacacccccttctc
acagaaccggtaggattttttccgCCAGTAGGGATAAAAATAATGAACTA
AAACTCGACGGGGactgatattcccatatttttatgAATGAGAATTTCCA
TTCTTTTGATTTCAAGGCAGaaaatttcagtggggatggcaaaataacat
aatattttttgcagtgaggattggtttatttgattattttcagtggtgac
aaaaattgcatgataattttccaccggggacggtATTTTGGCCAACTCTT
CcagtgagaaggggatgtattTCAGTGAACAATTTTATCCATGGTATGTC
CATGCTAAGGGCtaacatttttttacatttacTTTTTTTAGAATGAAATT
TCGATTATCTACATCCTCCAATGCAAAATCATTGACCATCAATTTTTCAG
GGACTTTGAAATTGAAGGTATGAAAGCTTTTAAATCTAAAGGGTTTTGTT
TTATAAATAAGAttaatatcgtttgcttactcatcaattttgatttagaa
gctttttgatattgaattgacacggatgtggagcaagattgatcagaaaa
aggaaaagcttatatcagcataatataacaataaataggcagacactgtc
ctgatatgaaacattatgtctgatatgaaacgggaacagttatgtaaaaa
gaaaacatttagaGAATTAGCATTTTAATAGGTTTAAAATGcttaagatt
ttttcaaaattctcatgTTCAAATTTCTTATGCTTTTCTTCTAACAGCAG
CCGTATTTTCTTTTTATGACTATTTTTCAATATTAAGCCACGGATTATTC
TTATGTTGTTCTCAGGTATTTTCTTTAAGACAACGATGTATGAGGTTTCC
ATCTTTACtataagcaaaaatttattatacactagataaacgactcataa
aacgatggagagcgatcattgtatttcctttgtttcagaaaacaattgat
gttctagctttgtccgcaaaggacaactgtcatggaagactagagtctac
ttctggctgaactttgctttttgataatttttttatgacgctaagtccag
tgaagtagactaggagcgtttggcgaggtcgccattttgagagaaaatgt
tataaatccaaataacaataaaactacttgtagttgaaagatataatcac
aaatgagaaacaaacattaataacagatttgcaaccCCTTATTctcgaat
aaaaacattgctccatactgtttttaccttccaaaaacaactataatctg
gcggactgttttacagtccgcctaagcaaaagaatattaccatatactac
cgggccacttaatcgcgccatccagtctatcaaaaagctttaagtgaaCC
CCGGGctactgtcatggcggctcgaagatgtctgatttttaaaaatgttt
atcagtcttatttttaaaaagttctctagctctttctttttgacacccct
gtctcagtgccccggtggcatgatttcagtacatgatttttttcagtaca
tggtttcagtacatgattttttcctacgtcactgcagtaatcaaattttt
attgcactcatttgtgaattgagatataaattgaataaagacagcgataa
taaaaaacagttcttgaattcccaagccatttaggatgattacaaatgag
tgcaataaaaatttgattactgcagtgacgtaggaaaaaatcatgtactg
aAACCATGTACTGAAAAATatcatgtactgaaatcatgccaccggggcac
tgagacaggggtgttttttgtacatttgcagaaaaaaaagtttgaaagta
aggctagcattccaagccggatacatttgtgaaatctaatgtgagaaaaa
catcattagacgagaaattcagacaaaatgcttatagtgacacaaaattt
tcaattggaaatatctttccaagactgtccccagaagagctgaaattaac
atacataagactttgagtgtcttggctccactgtggtatgaaaatccttt
ggaggcacgtggtggcaaggtgccttttttgaggttgaagtttgcaaatt
tccggtgtcaacattatatttcttatacacaacacgtcttttgcatcttt
ctcacagcttgaaacgtcataacgacttataattatcaattaagtggaag
aatctaaCTCTCACAGGAatgttttaagtctcttttgggaattgaatgag
tgattttcgataagaaatgcaataaaaatgcttcaaaaaattatttaatg
agggaaggagagtgaacaacaatatcattactgcggacatagctagtaca
cgagaaatcggcaaaaatctgttacttgtatatccagtgtataataaatc
cttgctaTAAGAAACCACAAATATAAAGCTCGACATCCTGTTTCAATCCC
TTGTTTGCATTACGGGTATAGAATACTGAAGATTATAATACGAGGCCCCC
TTGTTGgtaattctcaacttcagttgagttagaatctgagaatgtgtgtg
tgtctgtctgtctgtatgtcccaaaactttggggcagcctggagacttca
aaaattattcgatttggctgaaattttgcacacttgttccttgggtgaat
atcggggagtttttttcattttttgaaaatttttatttttggggcctggg
caagagtttttcgccaaaacgaggctaaaactttggggcagcctggagac
tacaaaaattgttcgatttggctgaaattttgcacacttgttccttgggt
gaatatcggggagtttttttcattttttgaaaatttttatttttggggcc
tgggcaagagtttttcgccaaaacgaggctaaaactttggggcagcctgg
agactacaaaaattgttcgatttggctgaaattttgcacacttgttcctt
gggtgaatatcggggagtttttttcattttttgaaaatttttatttttgg
ggcctgggcaagagtttttcgccaaaacgaggctaaaactttggggcagc
ctggagacttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCtccaaaatgatcgga
tttggttgagatttggcacacttgttcattgggtgaatatctgggggtct
acaattgggcctatgcatgatttgaagccactgaagttgagcccagtgcg
ttgcgcacgttcgactattgaaaatagaaaaaagattaACTCCTTAACGT
TCTCAAAAAGCTTATAATCGCATTTTTAAGATCTTTCAATGCTTAAATTA
TGAATCGAATTATCTCGGCTATGACGATAGCTAAACCCATAATGTTGGTA
CCGTTTGAAAGCTCTTTCAATGCCCTACTCTTTCAGCGTACTTTTTCAGA
TTTCATAAATTAGGTCCTCAATCAAAACTACCGACAGCCGAAAACATCGT
TCCTGAGAGAACAAATCTTCGCTGATGGGGCGtcaagaaattaaattttc
cagtgggataGAAAAGGGTTTATTTCACTAACCCAATAGTTAACAATATT
GAGGGTGTAGGAAGTAACAAAACCtcggaaatatttaatataataTATCT
CATAATTTAAAGGAgtatatgtttttcttttcataagaacatccaaaagt
tttaaagcattcggttattcttaactttttgagtttaagtACAAAAGGTT
CTTAGtgtgttcttaatttcaccattttgtaagtTTTTTGGGCCATtatc
ctaagaaattgggtgtttcagAATCCACAAAGGCTTAAATTGTTCATAAC
ATGTTCTCATATATTGTCAACCGAAGCCTTAGAttattatatagtttgtt
cttacaaaaaaacatgtattttcttgttttgtttttttagaaagACGAAT
ATATTGAGATAGTGGTGGAGAACGCTTTATCAACCAGGATTATCATCACG
GAAGCATTGTTCAGTGGTTATCTTGTGGGTTCGTGATTTATCAATTTATC
AAAGCTTATCTGTATAATACACGGATTGCAAAATTAAAAActgtctgaag
acaaatcacgcttttactcaaaatttttatgtgctcgttacatgacattt
atttctggttGTTTCGAATTTATCGACATTAACCCAG Coding sequence (CDS) from alignment at sc0000417:95105..107391+ >TCONS_00022420 ID=TCONS_00022420|Name=TCONS_00022420|organism=Clytia hemisphaerica|type=CDS|length=7203bp|location=Sequence derived from alignment at sc0000417:95105..107391+ (Clytia hemisphaerica)
ATTTATCCAAAGCGAGTTTCAAAGTATGACCTTATTTACTTAGGAATTAA
GGAAATTACAATTTTTCTATTCGTTAAATATAGAGCAGGGTGGCGGGCTG
ATTTCTGCGTTGGAAAGATACATAGAGTTCATCAGTTTTGGGATTTAGAT
TTTGGAGCAGATTCACATAAGCGTTTTACGCTTCATACAACAATGACGAA
GTTTGGTTTGATATTGATAgttttcttttgcaaattttttcatatttttg
gacAAAAAGAATTTAGGTTGTCTaagGATGACGATCTTGTACCTGGGTTC
GACGATAGCTCTGTCGGAAGAGATTTGATTCGAAAAGCATGGATACATAT
TCTGAGACAATCTAAGGAAAAGATGGATCAAGATGTATCTCTGATAGAAC
CAAGTACTGAGAAATCTTTACATCTTTCAAGCACAATTAACCCAATTAAA
TCGATGTCTCGGCAGAAAATATTGTTGGCTGCACTCTTGCGACAAGAACA
ATCAAAGCCAATCCTCGATGACAATACACGTCGCCAGCGTGCCGCATTTC
TTGCTCCAATCGTCCCTCAAGCGTTATCTGGCTTCACGGTGACTTTGAAG
AAATCAATATTGATACCGAAGAAGAGATTCACATTCCTAAGCGAGTTTAC
GGCCTCAAGTCCAGAATCCTTTGTTCGTGGAACTGGCCTTGATATGCGAC
TCGGTCGATTCACAGTGCCTTATACTGCGATGTATAATTTCAACGCAAAT
TTGAACATCCATCGTCCGTTAAAGATGAAGAAGGGCGGAGTGGGCGGACA
ATTATCGGACGGTGTGACTGCAAGGTTGTGTATCGATGGAGAATGTTTTA
GTAACATAATGAAATTTCGATTATCTACATCCTCCAATGCAAAATCATTG
ACCATCAATTTTTCAGGGACTTTGAAATTGAAGaaagACGAATATATTGA
GATAGTGGTGGAGAACGCTTTATCAACCAGGATTATCATCACGGAAGCAT
TGTTCAGTGGTTATCTTGTGGGTTCGTGAATTTATCCAAAGCGAGTTTCA
AAGTATGACCTTATTTACTTAGGAATTAAGGAAATTACAATTTTTCTATT
CGTTAAATATAGAGCAGGGTGGCGGGCTGATTTCTGCGTTGGAAAGATAC
ATAGAGTTCATCAGTTTTGGGATTTAGATTTTGGAGCAGATTCACATAAG
CGTTTTACGCTTCATACAACAATGACGAAGTTTGGTTTGATATTGATAgt
tttcttttgcaaattttttcatatttttggacAAAAAGAATTTAGGTTGT
CTaagGATGACGATCTTGTACCTGGGTTCGACGATAGCTCTGTCGGAAGA
GATTTGATTCGAAAAGCATGGATACATATTCTGAGACAATCTAAGGAAAA
GATGGATCAAGATGTATCTCTGATAGAACCAAGTACTGAGAAATCTTTAC
ATCTTTCAAGCACAATTAACCCAATTAAATCGATGTCTCGGCAGAAAATA
TTGTTGGCTGCACTCTTGCGACAAGAACAATCAAAGCCAATCCTCGATGA
CAATACACGTCGCCAGCGTGCCGCATTTCTTGCTCCAATCGTCCCTCAAG
CGTTATCTGGCTTCACGGTGACTTTGAAGAAATCAATATTGATACCGAAG
AAGAGATTCACATTCCTAAGCGAGTTTACGGCCTCAAGTCCAGAATCCTT
TGTTCGTGGAACTGGCCTTGATATGCGACTCGGTCGATTCACAGTGCCTT
ATACTGCGATGTATAATTTCAACGCAAATTTGAACATCCATCGTCCGTTA
AAGATGAAGAAGGGCGGAGTGGGCGGACAATTATCGGACGGTGTGACTGC
AAGGTTGTGTATCGATGGAGAATGTTTTAGTAACATAATGAAATTTCGAT
TATCTACATCCTCCAATGCAAAATCATTGACCATCAATTTTTCAGGGACT
TTGAAATTGAAGaaagACGAATATATTGAGATAGTGGTGGAGAACGCTTT
ATCAACCAGGATTATCATCACGGAAGCATTGTTCAGTGGTTATCTTGTGG
GTTCGTGAATTTATCCAAAGCGAGTTTCAAAGTATGACCTTATTTACTTA
GGAATTAAGGAAATTACAATTTTTCTATTCGTTAAATATAGAGCAGGGTG
GCGGGCTGATTTCTGCGTTGGAAAGATACATAGAGTTCATCAGTTTTGGG
ATTTAGATTTTGGAGCAGATTCACATAAGCGTTTTACGCTTCATACAACA
ATGACGAAGTTTGGTTTGATATTGATAgttttcttttgcaaattttttca
tatttttggacAAAAAGAATTTAGGTTGTCTaagGATGACGATCTTGTAC
CTGGGTTCGACGATAGCTCTGTCGGAAGAGATTTGATTCGAAAAGCATGG
ATACATATTCTGAGACAATCTAAGGAAAAGATGGATCAAGATGTATCTCT
GATAGAACCAAGTACTGAGAAATCTTTACATCTTTCAAGCACAATTAACC
CAATTAAATCGATGTCTCGGCAGAAAATATTGTTGGCTGCACTCTTGCGA
CAAGAACAATCAAAGCCAATCCTCGATGACAATACACGTCGCCAGCGTGC
CGCATTTCTTGCTCCAATCGTCCCTCAAGCGTTATCTGGCTTCACGGTGA
CTTTGAAGAAATCAATATTGATACCGAAGAAGAGATTCACATTCCTAAGC
GAGTTTACGGCCTCAAGTCCAGAATCCTTTGTTCGTGGAACTGGCCTTGA
TATGCGACTCGGTCGATTCACAGTGCCTTATACTGCGATGTATAATTTCA
ACGCAAATTTGAACATCCATCGTCCGTTAAAGATGAAGAAGGGCGGAGTG
GGCGGACAATTATCGGACGGTGTGACTGCAAGGTTGTGTATCGATGGAGA
ATGTTTTAGTAACATAATGAAATTTCGATTATCTACATCCTCCAATGCAA
AATCATTGACCATCAATTTTTCAGGGACTTTGAAATTGAAGaaagACGAA
TATATTGAGATAGTGGTGGAGAACGCTTTATCAACCAGGATTATCATCAC
GGAAGCATTGTTCAGTGGTTATCTTGTGGGTTCGTGAATTTATCCAAAGC
GAGTTTCAAAGTATGACCTTATTTACTTAGGAATTAAGGAAATTACAATT
TTTCTATTCGTTAAATATAGAGCAGGGTGGCGGGCTGATTTCTGCGTTGG
AAAGATACATAGAGTTCATCAGTTTTGGGATTTAGATTTTGGAGCAGATT
CACATAAGCGTTTTACGCTTCATACAACAATGACGAAGTTTGGTTTGATA
TTGATAgttttcttttgcaaattttttcatatttttggacAAAAAGAATT
TAGGTTGTCTaagGATGACGATCTTGTACCTGGGTTCGACGATAGCTCTG
TCGGAAGAGATTTGATTCGAAAAGCATGGATACATATTCTGAGACAATCT
AAGGAAAAGATGGATCAAGATGTATCTCTGATAGAACCAAGTACTGAGAA
ATCTTTACATCTTTCAAGCACAATTAACCCAATTAAATCGATGTCTCGGC
AGAAAATATTGTTGGCTGCACTCTTGCGACAAGAACAATCAAAGCCAATC
CTCGATGACAATACACGTCGCCAGCGTGCCGCATTTCTTGCTCCAATCGT
CCCTCAAGCGTTATCTGGCTTCACGGTGACTTTGAAGAAATCAATATTGA
TACCGAAGAAGAGATTCACATTCCTAAGCGAGTTTACGGCCTCAAGTCCA
GAATCCTTTGTTCGTGGAACTGGCCTTGATATGCGACTCGGTCGATTCAC
AGTGCCTTATACTGCGATGTATAATTTCAACGCAAATTTGAACATCCATC
GTCCGTTAAAGATGAAGAAGGGCGGAGTGGGCGGACAATTATCGGACGGT
GTGACTGCAAGGTTGTGTATCGATGGAGAATGTTTTAGTAACATAATGAA
ATTTCGATTATCTACATCCTCCAATGCAAAATCATTGACCATCAATTTTT
CAGGGACTTTGAAATTGAAGaaagACGAATATATTGAGATAGTGGTGGAG
AACGCTTTATCAACCAGGATTATCATCACGGAAGCATTGTTCAGTGGTTA
TCTTGTGGGTTCGTGAATTTATCCAAAGCGAGTTTCAAAGTATGACCTTA
TTTACTTAGGAATTAAGGAAATTACAATTTTTCTATTCGTTAAATATAGA
GCAGGGTGGCGGGCTGATTTCTGCGTTGGAAAGATACATAGAGTTCATCA
GTTTTGGGATTTAGATTTTGGAGCAGATTCACATAAGCGTTTTACGCTTC
ATACAACAATGACGAAGTTTGGTTTGATATTGATAgttttcttttgcaaa
ttttttcatatttttggacAAAAAGAATTTAGGTTGTCTaagGATGACGA
TCTTGTACCTGGGTTCGACGATAGCTCTGTCGGAAGAGATTTGATTCGAA
AAGCATGGATACATATTCTGAGACAATCTAAGGAAAAGATGGATCAAGAT
GTATCTCTGATAGAACCAAGTACTGAGAAATCTTTACATCTTTCAAGCAC
AATTAACCCAATTAAATCGATGTCTCGGCAGAAAATATTGTTGGCTGCAC
TCTTGCGACAAGAACAATCAAAGCCAATCCTCGATGACAATACACGTCGC
CAGCGTGCCGCATTTCTTGCTCCAATCGTCCCTCAAGCGTTATCTGGCTT
CACGGTGACTTTGAAGAAATCAATATTGATACCGAAGAAGAGATTCACAT
TCCTAAGCGAGTTTACGGCCTCAAGTCCAGAATCCTTTGTTCGTGGAACT
GGCCTTGATATGCGACTCGGTCGATTCACAGTGCCTTATACTGCGATGTA
TAATTTCAACGCAAATTTGAACATCCATCGTCCGTTAAAGATGAAGAAGG
GCGGAGTGGGCGGACAATTATCGGACGGTGTGACTGCAAGGTTGTGTATC
GATGGAGAATGTTTTAGTAACATAATGAAATTTCGATTATCTACATCCTC
CAATGCAAAATCATTGACCATCAATTTTTCAGGGACTTTGAAATTGAAGa
aagACGAATATATTGAGATAGTGGTGGAGAACGCTTTATCAACCAGGATT
ATCATCACGGAAGCATTGTTCAGTGGTTATCTTGTGGGTTCGTGAATTTA
TCCAAAGCGAGTTTCAAAGTATGACCTTATTTACTTAGGAATTAAGGAAA
TTACAATTTTTCTATTCGTTAAATATAGAGCAGGGTGGCGGGCTGATTTC
TGCGTTGGAAAGATACATAGAGTTCATCAGTTTTGGGATTTAGATTTTGG
AGCAGATTCACATAAGCGTTTTACGCTTCATACAACAATGACGAAGTTTG
GTTTGATATTGATAgttttcttttgcaaattttttcatatttttggacAA
AAAGAATTTAGGTTGTCTaagGATGACGATCTTGTACCTGGGTTCGACGA
TAGCTCTGTCGGAAGAGATTTGATTCGAAAAGCATGGATACATATTCTGA
GACAATCTAAGGAAAAGATGGATCAAGATGTATCTCTGATAGAACCAAGT
ACTGAGAAATCTTTACATCTTTCAAGCACAATTAACCCAATTAAATCGAT
GTCTCGGCAGAAAATATTGTTGGCTGCACTCTTGCGACAAGAACAATCAA
AGCCAATCCTCGATGACAATACACGTCGCCAGCGTGCCGCATTTCTTGCT
CCAATCGTCCCTCAAGCGTTATCTGGCTTCACGGTGACTTTGAAGAAATC
AATATTGATACCGAAGAAGAGATTCACATTCCTAAGCGAGTTTACGGCCT
CAAGTCCAGAATCCTTTGTTCGTGGAACTGGCCTTGATATGCGACTCGGT
CGATTCACAGTGCCTTATACTGCGATGTATAATTTCAACGCAAATTTGAA
CATCCATCGTCCGTTAAAGATGAAGAAGGGCGGAGTGGGCGGACAATTAT
CGGACGGTGTGACTGCAAGGTTGTGTATCGATGGAGAATGTTTTAGTAAC
ATAATGAAATTTCGATTATCTACATCCTCCAATGCAAAATCATTGACCAT
CAATTTTTCAGGGACTTTGAAATTGAAGaaagACGAATATATTGAGATAG
TGGTGGAGAACGCTTTATCAACCAGGATTATCATCACGGAAGCATTGTTC
AGTGGTTATCTTGTGGGTTCGTGAATTTATCCAAAGCGAGTTTCAAAGTA
TGACCTTATTTACTTAGGAATTAAGGAAATTACAATTTTTCTATTCGTTA
AATATAGAGCAGGGTGGCGGGCTGATTTCTGCGTTGGAAAGATACATAGA
GTTCATCAGTTTTGGGATTTAGATTTTGGAGCAGATTCACATAAGCGTTT
TACGCTTCATACAACAATGACGAAGTTTGGTTTGATATTGATAgttttct
tttgcaaattttttcatatttttggacAAAAAGAATTTAGGTTGTCTaag
GATGACGATCTTGTACCTGGGTTCGACGATAGCTCTGTCGGAAGAGATTT
GATTCGAAAAGCATGGATACATATTCTGAGACAATCTAAGGAAAAGATGG
ATCAAGATGTATCTCTGATAGAACCAAGTACTGAGAAATCTTTACATCTT
TCAAGCACAATTAACCCAATTAAATCGATGTCTCGGCAGAAAATATTGTT
GGCTGCACTCTTGCGACAAGAACAATCAAAGCCAATCCTCGATGACAATA
CACGTCGCCAGCGTGCCGCATTTCTTGCTCCAATCGTCCCTCAAGCGTTA
TCTGGCTTCACGGTGACTTTGAAGAAATCAATATTGATACCGAAGAAGAG
ATTCACATTCCTAAGCGAGTTTACGGCCTCAAGTCCAGAATCCTTTGTTC
GTGGAACTGGCCTTGATATGCGACTCGGTCGATTCACAGTGCCTTATACT
GCGATGTATAATTTCAACGCAAATTTGAACATCCATCGTCCGTTAAAGAT
GAAGAAGGGCGGAGTGGGCGGACAATTATCGGACGGTGTGACTGCAAGGT
TGTGTATCGATGGAGAATGTTTTAGTAACATAATGAAATTTCGATTATCT
ACATCCTCCAATGCAAAATCATTGACCATCAATTTTTCAGGGACTTTGAA
ATTGAAGaaagACGAATATATTGAGATAGTGGTGGAGAACGCTTTATCAA
CCAGGATTATCATCACGGAAGCATTGTTCAGTGGTTATCTTGTGGGTTCG
TGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022420-exon-sc0000417-1491911889:95105..95380 | TCONS_00022420-exon-sc0000417-1491911889:95105..95380 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1510915933:95105..95380 | TCONS_00022420-exon-sc0000417-1510915933:95105..95380 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1575043694:95105..95380 | TCONS_00022420-exon-sc0000417-1575043694:95105..95380 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1491911889:98966..99082 | TCONS_00022420-exon-sc0000417-1491911889:98966..99082 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1510915933:98966..99082 | TCONS_00022420-exon-sc0000417-1510915933:98966..99082 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1575043694:98966..99082 | TCONS_00022420-exon-sc0000417-1575043694:98966..99082 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1491911889:99869..99968 | TCONS_00022420-exon-sc0000417-1491911889:99869..99968 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1510915933:99869..99968 | TCONS_00022420-exon-sc0000417-1510915933:99869..99968 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1575043694:99869..99968 | TCONS_00022420-exon-sc0000417-1575043694:99869..99968 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1491911889:101313..101470 | TCONS_00022420-exon-sc0000417-1491911889:101313..101470 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1510915933:101313..101470 | TCONS_00022420-exon-sc0000417-1510915933:101313..101470 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1575043694:101313..101470 | TCONS_00022420-exon-sc0000417-1575043694:101313..101470 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1491911889:102292..102497 | TCONS_00022420-exon-sc0000417-1491911889:102292..102497 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1510915933:102292..102497 | TCONS_00022420-exon-sc0000417-1510915933:102292..102497 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1575043694:102292..102497 | TCONS_00022420-exon-sc0000417-1575043694:102292..102497 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1491911889:103496..103571 | TCONS_00022420-exon-sc0000417-1491911889:103496..103571 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1510915933:103496..103571 | TCONS_00022420-exon-sc0000417-1510915933:103496..103571 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1575043694:103496..103571 | TCONS_00022420-exon-sc0000417-1575043694:103496..103571 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1491911889:107145..107391 | TCONS_00022420-exon-sc0000417-1491911889:107145..107391 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1510915933:107145..107391 | TCONS_00022420-exon-sc0000417-1510915933:107145..107391 | Clytia hemisphaerica | exon |
| TCONS_00022420-exon-sc0000417-1575043694:107145..107391 | TCONS_00022420-exon-sc0000417-1575043694:107145..107391 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000417 | supercontig | sc0000417:95105..107391 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR008983 | Tumour_necrosis_fac-like_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
|
