TCONS_00022460 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022460
Unique NameTCONS_00022460
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1796

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022460 ID=TCONS_00022460|Name=TCONS_00022460|organism=Clytia hemisphaerica|type=transcript|length=1796bp
acaagaaGATGGGGTACCacgaaaaagttttatttttgggCTTCATATAC
CAAATAATAATTTGTGTTGAATGTAGAATTCAATCTTTTGGCACATACAA
ACACTATGAAATGGGCTTTGCTAACGTTGAGCTTTTCGAGCATTCTAAAC
TGGAAATTCAGCCATTTTTTGTAACAGAAGTTGAAAGTGCTATGGAATGT
GCTGATGAATGTTTGATGGCTGATCCAAAGATAAATATGTGTCAAGGCTT
CAATTTGTACACACGTGACCACCAAGCGACCAATAAGAGTAGTTGTGAAT
TATTGGCGAGACATCGATTTACATTACCGAGTACTTTGTTTGTCAGAAAA
GCTGATTGGATGCATTATCAACCCGTGACTGTATGTGCAAATCCAGCACC
GTGTGTGATCCAATTTAAAGAAAACGTGAGGTGTGTACCGAGAGTGGAAA
GTGATTCGGTAGATTGTATCTGTCAACCATATTGGAGAGGAGACCACTGc
aacgaagaagaaaaagAAGCTAAACATTACACTATCCAAAGTGGTGATGT
GGAACTTGGTAGAAACGTTATTCGTCCACAAGAATACATCTCCATCTCAA
TGTGGGTGAAACTGGCGCAAGTTCAAACACCGAACATCGTATTGATAGAC
ATCAAAGCTGCCAATTGGAGATTCATTGCCGAATGTATGGAAGATTCTTA
TGGAGGACaacaaatcatttttcaattaaCGAATCTTGACAGTGACCAGA
TACACGATcaaacttatgttGCAGGAGGTTTGAAGGAGAGTGAATGGTCG
TTGTTGGCTTGTTCCCTTGATTTCCGTCTTGATAGAGGGAACGTGACATG
TTTCTTTAACCAAGATGTATTATACCACTCAACCTTCCACGCCAATCAAA
CCTTCGCTGATCTTTACNGTATTATACCACTCAACCTTCCACGCCAATCA
AACCTTCGCTGATCTTTACCTCAATGTTAACACAGTACCAATGACCACAA
GCGTTCCAGATTCATCTTTAAAAATTCATATGAAGAATATCTGGTGGTGG
CCCAAAACATTTTTCATCCCAGAAGAAATCCCTTCAATGTTTTCTCAAAC
TTGGTTCCCAAAAGGACGAGCTTATTACCACGTAGGAAATAGTATTCCAA
GTGTATCGGGAGATATCAAACATTAGTGACGAGTTGACTAAATAATCTAA
ATGTAATTAAATCTCTCCCCCAAAGCCGAATGGGAGTTAAATAACCGCAG
CGGCGAAGCAAAATTACATATGGAAAAAGATCCATACCAGACGTCAGTCA
ATAATTGTTGGCTAACCCAAAGGCGGATCGTAATTGCAGACGGCGGAAAT
GAATCATAACaaactcaagaaaatgttttgtcTCTTTagatataaaaaca
aacttcgaAGAGGCAAAAAAAAAaacaaagacaattttAATAACTTGATA
CCTTATGCAACATTgaattgagaaaatgttttAGTTATGGCTTAGAATCT
AAAACTTATTTGAAGGCTTCCATaagtttcattaaaaaatacCATGTACG
TTTAGTATTTGGtatttaaatttaaaacttttttaaaattttacgatttt
tcaatttttttacaagcTATAGGAACACGCATCACTGTGACAATTATCAG
AAAGATAAAGCAAtgtaaatagttttttttatcgTCAACTCTTTCAGTTC
CGTACCAATCTTCGAAATGTACGATAGAGCGGTGGAAGTTTCAAATTCCC
GccacattttcaggatttttctcctttttctctCAGGCACACcggc
Run BLAST on NCBI

protein sequence of TCONS_00022460-protein

>TCONS_00022460-protein ID=TCONS_00022460-protein|Name=TCONS_00022460-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
KKMGYHEKVLFLGFIYQIIICVECRIQSFGTYKHYEMGFANVELFEHSKL
EIQPFFVTEVESAMECADECLMADPKINMCQGFNLYTRDHQATNKSSCEL
LARHRFTLPSTLFVRKADWMHYQPVTVCANPAPCVIQFKENVRCVPRVES
DSVDCICQPYWRGDHCNEEEKEAKHYTIQSGDVELGRNVIRPQEYISISM
WVKLAQVQTPNIVLIDIKAANWRFIAECMEDSYGGQQIIFQLTNLDSDQI
HDQTYVAGGLKESEWSLLACSLDFRLDRGNVTCFFNQDVLYHSTFHANQT
FADLYXIIPLNLPRQSNLR
Run BLAST on NCBI

transcript from alignment at sc0000421:52779..59061-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022460 ID=TCONS_00022460|Name=TCONS_00022460|organism=Clytia hemisphaerica|type=transcript|length=6283bp|location=Sequence derived from alignment at sc0000421:52779..59061- (Clytia hemisphaerica)
ACAAGAAGATGGGGTACCACGAAAAAGTTTTATTTTTGGGCTTCATATAC
CAAATAATAATTTGTGTTGAATGTAGAATTCAATCTTTTGGCACATACAA
ACACTATGAAATGGGCTTTGCTAACGTTGAGCTTTTCGAGCATTCTAAAC
TGGAAATTCAGCCATTTTTTGTAACAGAAGTTGAAAGTGCTATGGAATGT
GCTGATGAATGTTTGATGGCTGATCCAAAGATAAATATGTGTCAAGGCTT
CAATTTGTACACACGTGACCACCAAGCGACCAATAAGAGTAGTTGTGAAT
TATTGGCGAGACATCGATTTACATTACCGAGTACTTTGTTTGTCAGAAAA
GCTGATTGGATGCATTATCAACCCGTGGTATGCTTTTCTTTTCTCTTGTT
TTTTCTTTTCTTTTCTTTTCCTTTCTTTTTATTTCTAGTACTCACACANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTACCAAAAA
TCAAAAGATTCCTATGATTCAATCCTGAGAAAAGTTGGTAACAGACGAAC
GAACGAACGAACGAACGAACGAACGGACGAACGAACGAACGAACGAACGA
ACACAGGTTAATTTATAGGACCTCCACCCTACCGGCTGAGCCGAGTCCAA
TATCTTTTCTCGTAGCCCAATATTTTTCATATTGGATGAGACTGCGTCCA
ATNTGCATTTAACACATATATAATTGATATCTACGTGAGCGTGACCATTA
AACAATCATTCAGAACACAAATAGTGACGATCTATTAAAATTAGTTGTTT
GTTTCTTAATAAAAAAACGTTTTATAGAAACCAAAATTTCATGCTCTTGA
ATTAAAAAAGTTAATGATACAATTTTTTCAAGTCCAAAAAACCCGANGCT
CTATTATAAAAAGGAATTTTCTTTCCGTAAACAATCTTCCTATTATTGTT
GGAAAATTGCAAATCAAGCTGACAATATATTGCGGACACCTTTTCAATAT
ATTGCCGGCACTCATATATTTTCAATATATTGGCTGACGATACATTGTGT
AGTGTATGTAGCCCTTAGGATTAAGACAATTTCGATGTCAATCGTACTCT
ACACGGAGACGAGGTTATACAATTCTTCAAGTTTAGTTTAAATATGTTCT
TTTCTATTATCGTTTTTAGACTGTATGTGCAAATCCAGCACCGTGTGTGA
TCCAATTTAAAGAAAACGTGAGGTGTGTACCGAGAGTGGAAAGTGATTCG
GTAGATTGTATCTGTCAACCATATTGGAGAGGAGACCACTGCAACGAAGA
AGAAAAAGGTTAGATTTGGTCTACCGCTTATTGTTATTTTACAATGGTTG
CTATCTTTTCGCCCTATTAGAGTTTTATAATGTTGATTCTTTAAAAAGTC
CAATATTAAATACTCTTCTCCAAAGAAACACTGAAATATATCATTTAACA
TTCTTTAAAATTCGTTTAAAAAACTGAAATCATCAGCCTAATGTACTTTT
GTAAAACCTTGTGTCAACAAGTAGATTGGCCTCCTCAACATGAGCCCTAC
GACATTCTAAAAAAGCTAATTGAGGATCAATTTTTTTGTTCTGTAGAAGC
TAAACATTACACTATCCAAAGTGGTGATGTGGAACTTGGTAGAAACGTTA
TTCGTCCACAAGANAGGATCAATTTTTTTGTTCTGTAGAAGCTAAACATT
ACACTATCCAAAGTGGTGATGTGGAACTTGGTAGAAACGTTATTCGTCCA
CAAGAATACATCTCCATCTCAATGTGGGTGAAACTGGCGCAAGTTCAAAC
ACCGAACATCGTATTGATAGACATCAAAGCTGCCAATTGGAGATTCATTG
CCGAATGTATGGAAGATTCTTATGGAGGACAACAAATCATTTTTCAATTA
ACGAATCTTGACAGTGACCAGATACACGATCAAACTTATGTTGTAAGTTT
ATATTTAATAAATTTCTTTGATTTATTCAGACTGACTCCTTTCCTACCAC
ACTTTTCTTCCTTAACCTGTTCTGATGTATAAGACCTTTAAATTTGGTAT
CTTTCAGTGAAGAGTAAAAAATCATTTTTAACAGTGGACTGACTTTCCAC
ACCAATACGCTTTTCTTATAATTTGTTAAAAACGCGTACTGTATGTATTT
TATTTCTAATACTACTTGCCCTTTCAAGGGTCTGGTGTAAAAATACAGGC
TTTTTTAAGATTTCTTAAGAAATTGCCAAAATTGAGGGTGAAATATTCTT
AGCATATTCCAACTTTTTTTAGACTTGATCTTTATACAAACACGACAAAT
TATAATTTGAGATTTTTGAGTGCACATTAGGAGCTAAAATTATATTTCTG
CTTCACAGTTTCAATTTAGTCAAACAAAAAACCCAGTTTTTTCTGTTAAC
CAAAATACAAGATTACTGTATTCTTATCAAATCTGTGAAACTCACCCTAG
AAGGTATTCTTAAGATATTCTTACGATTTGGCCAATTTTCGCCCTGATAT
TCTTATGGAAGTTATTCTTATTAAGCGTGTATAGACTATGCTTGTGTACC
AAAAGTTTAAGGTACCCTGTCTCCCTGAAACGTAATTAAGGTTTGAATAT
GGGACTTACTATCGTAAACATTTATTTCTTCATGCTAACTAGTTAGTCGG
AATAAGATTAACCTAGACAGCCATTTTGAAATAAATTAGTTTTTGCTAAT
ATATTTGAAAACTCAAAGGGTTTCAAAATAAAGCAGGAATTTATTCAGCG
AAACCAAGGAAACTAAATCAAAATGTATTCAAAGAATACTCAATAATTCT
ATATGTGCATTTGGGTTTGAATTGCATGAATTTTCAGGGCAGGATTCCAA
ATTTCCCATCAGTAAAATATTTTCAAGTATGAATCATTCATTATGTATAT
CCGCTAATGAGAAAGCTTGAAATACCCAAAAATCTCAATATATTTCGACT
TTGATAAAAATCGTCTGTAAAAAATATTCATCGGCAATAATTTTTCATCG
GTAAAAAGAAAAAACACTGGAAACAATTCATCGGCATAAAACTTCATCGA
TGATTTGAAACCAAGCGATCACCTTTTAAACGACGAATTTCCTACTGTAC
GAAATAAAACAAGTGATACTTTTATGGACCTACCTGTTCATAAAACGAAT
AATAAAAGTTTAATGAAGGCAATGTAGCAACAAAAACTGAATAAAATNAA
ACAAGTGATACTTTTATGGACCTACCTGTTCATAAAACGAATAATAAAAG
TTTAATGAAGGCAATGTAGCAACAAAAACTGAATAAAATATTGCAAATTG
GTGCCAAAAGTTTTCTTGTCTTTGTACAAAAACTAAGGTCCAAAAAACCC
TATTTTTGGGCATTTTTCGGCGCAAAGATTTTTTTATCATAAAATGAGCT
TTTTCATATTCAGCATACTCCAGGAAACACACTCAAAGCACACTCCTTTA
GACCTCCCGGTAGGTCCAAAGAAGAAATTTAATAAAGAAAATACATTTTT
CTTTTAGGCAGGAGGTTTGAAGGAGAGTGAATGGTCGTTGTTGGCTTGTT
CCCTTGATTTCCGTCTTGATAGAGGGAACGTGACATGTTTCTTTAACCAA
GATGTATTATACCACTCAACCTTCCACGCCAATCAAACCTTCGCTGATCT
TTACNGTATTATACCACTCAACCTTCCACGCCAATCAAACCTTCGCTGAT
CTTTACCTCAATGTTAACACAGTACCAATGACCACAAGCGTTCCAGATTC
ATCTTTAAAAATTCATATGAAGAATATCTGGTGGTGGCCCAAAACATTTT
TCATCCCAGAAGAAATCCCTTCAATGTTTTCTCAAACTTGGTTCCCAAAA
GGACGAGCTTATTACCACGTAGGAAATAGTATTCCAAGTGTATCGGGAGA
TATCAAACATTAGTGACGAGTTGACTAAATAATCTAAATGTAATTAAATC
TCTCCCCCAAAGCCGAATGGGAGTTAAATAACCGCAGCGGCGAAGCAAAA
TTACATATGGAAAAAGATCCATACCAGACGTCAGTCAATAATTGTTGGCT
AACCCAAAGGCGGATCGTAATTGCAGACGGCGGAAATGAATCATAACAAA
CTCAAGAAAATGTTTTGTCTCTTTAGATATAAAAACAAACTTCGAAGAGG
CAAAAAAAAAAACAAAGACAATTTTAATAACTTGATACCTTATGCAACAT
TGAATTGAGAAAATGTTTTAGTTATGGCTTAGAATCTAAAACTTATTTGA
AGGCTTCCATAAGTTTCATTAAAAAATACCATGTACGTTTAGTATTTGGT
ATTTAAATTTAAAACTTTTTTAAAATTTTACGATTTTTCAATTTTTTTAC
AAGCTATAGGAACACGCATCACTGTGACAATTATCAGAAAGATAAAGCAA
TGTAAATAGTTTTTTTTATCGTCAACTCTTTCAGTTCCGTACCAATCTTC
GAAATGTACGATAGAGCGGTGGAAGTTTCAAATTCCCGCCACATTTTCAG
GATTTTTCTCCTTTTTCTCTCAGGCACACCGGC

Coding sequence (CDS) from alignment at sc0000421:52779..59061-

>TCONS_00022460 ID=TCONS_00022460|Name=TCONS_00022460|organism=Clytia hemisphaerica|type=CDS|length=3840bp|location=Sequence derived from alignment at sc0000421:52779..59061- (Clytia hemisphaerica)
GCAGGAGGTTTGAAGGAGAGTGAATGGTCGTTGTTGGCTTGTTCCCTTGA
TTTCCGTCTTGATAGAGGGAACGTGACATGTTTCTTTAACCAAGATGTAT
TATACCACTCAACCTTCCACGCCAATCAAACCTTCGCTGATCTTTACNGT
ATTATACCACTCAACCTTCCACGCCAATCAAACCTTCGCTGAAAGCTAAA
CATTACACTATCCAAAGTGGTGATGTGGAACTTGGTAGAAACGTTATTCG
TCCACAAGAATACATCTCCATCTCAATGTGGGTGAAACTGGCGCAAGTTC
AAACACCGAACATCGTATTGATAGACATCAAAGCTGCCAATTGGAGATTC
ATTGCCGAATGTATGGAAGATTCTTATGGAGGACAACAAATCATTTTTCA
ATTAACGAATCTTGACAGTGACCAGATACACGATCAAACTTATGTTACTG
TATGTGCAAATCCAGCACCGTGTGTGATCCAATTTAAAGAAAACGTGAGG
TGTGTACCGAGAGTGGAAAGTGATTCGGTAGATTGTATCTGTCAACCATA
TTGGAGAGGAGACCACTGCAACGAAGAAGAAAAAGAAGAAGATGGGGTAC
CACGAAAAAGTTTTATTTTTGGGCTTCATATACCAAATAATAATTTGTGT
TGAATGTAGAATTCAATCTTTTGGCACATACAAACACTATGAAATGGGCT
TTGCTAACGTTGAGCTTTTCGAGCATTCTAAACTGGAAATTCAGCCATTT
TTTGTAACAGAAGTTGAAAGTGCTATGGAATGTGCTGATGAATGTTTGAT
GGCTGATCCAAAGATAAATATGTGTCAAGGCTTCAATTTGTACACACGTG
ACCACCAAGCGACCAATAAGAGTAGTTGTGAATTATTGGCGAGACATCGA
TTTACATTACCGAGTACTTTGTTTGTCAGAAAAGCTGATTGGATGCATTA
TCAACCCGTGGCAGGAGGTTTGAAGGAGAGTGAATGGTCGTTGTTGGCTT
GTTCCCTTGATTTCCGTCTTGATAGAGGGAACGTGACATGTTTCTTTAAC
CAAGATGTATTATACCACTCAACCTTCCACGCCAATCAAACCTTCGCTGA
TCTTTACNGTATTATACCACTCAACCTTCCACGCCAATCAAACCTTCGCT
GAAAGCTAAACATTACACTATCCAAAGTGGTGATGTGGAACTTGGTAGAA
ACGTTATTCGTCCACAAGAATACATCTCCATCTCAATGTGGGTGAAACTG
GCGCAAGTTCAAACACCGAACATCGTATTGATAGACATCAAAGCTGCCAA
TTGGAGATTCATTGCCGAATGTATGGAAGATTCTTATGGAGGACAACAAA
TCATTTTTCAATTAACGAATCTTGACAGTGACCAGATACACGATCAAACT
TATGTTACTGTATGTGCAAATCCAGCACCGTGTGTGATCCAATTTAAAGA
AAACGTGAGGTGTGTACCGAGAGTGGAAAGTGATTCGGTAGATTGTATCT
GTCAACCATATTGGAGAGGAGACCACTGCAACGAAGAAGAAAAAGAAGAA
GATGGGGTACCACGAAAAAGTTTTATTTTTGGGCTTCATATACCAAATAA
TAATTTGTGTTGAATGTAGAATTCAATCTTTTGGCACATACAAACACTAT
GAAATGGGCTTTGCTAACGTTGAGCTTTTCGAGCATTCTAAACTGGAAAT
TCAGCCATTTTTTGTAACAGAAGTTGAAAGTGCTATGGAATGTGCTGATG
AATGTTTGATGGCTGATCCAAAGATAAATATGTGTCAAGGCTTCAATTTG
TACACACGTGACCACCAAGCGACCAATAAGAGTAGTTGTGAATTATTGGC
GAGACATCGATTTACATTACCGAGTACTTTGTTTGTCAGAAAAGCTGATT
GGATGCATTATCAACCCGTGGCAGGAGGTTTGAAGGAGAGTGAATGGTCG
TTGTTGGCTTGTTCCCTTGATTTCCGTCTTGATAGAGGGAACGTGACATG
TTTCTTTAACCAAGATGTATTATACCACTCAACCTTCCACGCCAATCAAA
CCTTCGCTGATCTTTACNGTATTATACCACTCAACCTTCCACGCCAATCA
AACCTTCGCTGAAAGCTAAACATTACACTATCCAAAGTGGTGATGTGGAA
CTTGGTAGAAACGTTATTCGTCCACAAGAATACATCTCCATCTCAATGTG
GGTGAAACTGGCGCAAGTTCAAACACCGAACATCGTATTGATAGACATCA
AAGCTGCCAATTGGAGATTCATTGCCGAATGTATGGAAGATTCTTATGGA
GGACAACAAATCATTTTTCAATTAACGAATCTTGACAGTGACCAGATACA
CGATCAAACTTATGTTACTGTATGTGCAAATCCAGCACCGTGTGTGATCC
AATTTAAAGAAAACGTGAGGTGTGTACCGAGAGTGGAAAGTGATTCGGTA
GATTGTATCTGTCAACCATATTGGAGAGGAGACCACTGCAACGAAGAAGA
AAAAGAAGAAGATGGGGTACCACGAAAAAGTTTTATTTTTGGGCTTCATA
TACCAAATAATAATTTGTGTTGAATGTAGAATTCAATCTTTTGGCACATA
CAAACACTATGAAATGGGCTTTGCTAACGTTGAGCTTTTCGAGCATTCTA
AACTGGAAATTCAGCCATTTTTTGTAACAGAAGTTGAAAGTGCTATGGAA
TGTGCTGATGAATGTTTGATGGCTGATCCAAAGATAAATATGTGTCAAGG
CTTCAATTTGTACACACGTGACCACCAAGCGACCAATAAGAGTAGTTGTG
AATTATTGGCGAGACATCGATTTACATTACCGAGTACTTTGTTTGTCAGA
AAAGCTGATTGGATGCATTATCAACCCGTGGCAGGAGGTTTGAAGGAGAG
TGAATGGTCGTTGTTGGCTTGTTCCCTTGATTTCCGTCTTGATAGAGGGA
ACGTGACATGTTTCTTTAACCAAGATGTATTATACCACTCAACCTTCCAC
GCCAATCAAACCTTCGCTGATCTTTACNGTATTATACCACTCAACCTTCC
ACGCCAATCAAACCTTCGCTGAAAGCTAAACATTACACTATCCAAAGTGG
TGATGTGGAACTTGGTAGAAACGTTATTCGTCCACAAGAATACATCTCCA
TCTCAATGTGGGTGAAACTGGCGCAAGTTCAAACACCGAACATCGTATTG
ATAGACATCAAAGCTGCCAATTGGAGATTCATTGCCGAATGTATGGAAGA
TTCTTATGGAGGACAACAAATCATTTTTCAATTAACGAATCTTGACAGTG
ACCAGATACACGATCAAACTTATGTTACTGTATGTGCAAATCCAGCACCG
TGTGTGATCCAATTTAAAGAAAACGTGAGGTGTGTACCGAGAGTGGAAAG
TGATTCGGTAGATTGTATCTGTCAACCATATTGGAGAGGAGACCACTGCA
ACGAAGAAGAAAAAGAAGAAGATGGGGTACCACGAAAAAGTTTTATTTTT
GGGCTTCATATACCAAATAATAATTTGTGTTGAATGTAGAATTCAATCTT
TTGGCACATACAAACACTATGAAATGGGCTTTGCTAACGTTGAGCTTTTC
GAGCATTCTAAACTGGAAATTCAGCCATTTTTTGTAACAGAAGTTGAAAG
TGCTATGGAATGTGCTGATGAATGTTTGATGGCTGATCCAAAGATAAATA
TGTGTCAAGGCTTCAATTTGTACACACGTGACCACCAAGCGACCAATAAG
AGTAGTTGTGAATTATTGGCGAGACATCGATTTACATTACCGAGTACTTT
GTTTGTCAGAAAAGCTGATTGGATGCATTATCAACCCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012599XLOC_012599Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022460-exon-sc0000421-1575043694:58685..59061TCONS_00022460-exon-sc0000421-1575043694:58685..59061Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1575043694:56004..56142TCONS_00022460-exon-sc0000421-1575043694:56004..56142Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1575043694:55370..55623TCONS_00022460-exon-sc0000421-1575043694:55370..55623Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1575043694:52779..53804TCONS_00022460-exon-sc0000421-1575043694:52779..53804Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1510915933:58685..59061TCONS_00022460-exon-sc0000421-1510915933:58685..59061Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1510915933:56004..56142TCONS_00022460-exon-sc0000421-1510915933:56004..56142Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1510915933:55370..55623TCONS_00022460-exon-sc0000421-1510915933:55370..55623Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1510915933:52779..53804TCONS_00022460-exon-sc0000421-1510915933:52779..53804Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1491911889:58685..59061TCONS_00022460-exon-sc0000421-1491911889:58685..59061Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1491911889:56004..56142TCONS_00022460-exon-sc0000421-1491911889:56004..56142Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1491911889:55370..55623TCONS_00022460-exon-sc0000421-1491911889:55370..55623Clytia hemisphaericaexon
TCONS_00022460-exon-sc0000421-1491911889:52779..53804TCONS_00022460-exon-sc0000421-1491911889:52779..53804Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022460-proteinTCONS_00022460-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000421supercontigsc0000421:52779..59061 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.320904	0.369835	0.468452	0.321927	0	0	0.0287412	0	0.406754	0.186674	0.174654	0.367393	3.14143	4.09587	0.880996	0.505513	0.129412	0.212229	6.77277	7.46023	0.994258	0.853959	1.14642	1.50948	1.40666	2.57053	0.153267	0.0327142	0.471439	0.389888
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013032EGF-like_CS
IPR000742EGF-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022460 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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