TCONS_00022478 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022478
Unique NameTCONS_00022478
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022478 ID=TCONS_00022478|Name=TCONS_00022478|organism=Clytia hemisphaerica|type=transcript|length=4147bp
TAGAAACCACAcggtttgtttactttgttcAAAAATGTTCGAAGAACAGT
TTTAAACAGTTGAAACTGTAAAAaagaaagctttttaaaaaaaattaggc
aaaTTTAAGTccttatgacgtcatcatatgTTTCGCTATTTGACAAGTTT
ACGGAATGGAGATAATGATTGTGCTGAACAGCACCGAAACGAGGCTACTC
AAGATGGCGGCGAAAGGAATGGTGGAaagcaaggaaaatttcaaactttg
tgCTCGTTTGCAATCAAGAAGACATTCAAGTGgttgttctttttctttct
aaCTGTAGTATTCCTAACTGGACAGTACATCCTAGCCGGGAAACTGATCA
ACAACGATATTTTTCCACCAAGAGAACAACAAGGATATTTCTATACGAAA
CAACGCCGAAACGTTAATTCCAATACGTCAAATGAAGGTCAAGGAATTCA
AAAACTACAATTTCCATCGACTTATCATGTCTTTGGGGTATTGAAACTAC
CGTATGGGAACATCAATGAACCTTTTGAAGCATGGTACTCGAGAGATGAG
AAGATGAGCAGAATAGATTATTATGGAGGGATGGATAGGACTTACCAGCG
AGAAGATTTATCCAGTTATGGATTCGGTGCAAAAGTCATCCcagaatttt
cagaaaaaaagaaaaagatattcCGTGGTTGTTTACATCACGTAGGGACC
AGAAAGTTTCCAATCAAAGCACAAAGTATTATTCCAAATGAAAACGCATT
TAAATTTAGCGGAAAATGCACATTCAACAAAACAATACCTTGCTATAAAT
GGAAACACACTTTCAAAGTTTTAACAAAAATCAACAGTTACACCCTTTAC
ACCACAAGAGACCAACCGACCATCCCTCTCCGATATGATATGATGGGTTA
TGATACATTATTGGCATCTTACTATGATAAATACATCTTAATGTATACCA
AATTTGAACCATGGAAATTCGATTTCTCAGTCTTCGAAATACCCTCCGAC
GTCCACTGTTTCGATCTGAGCGGCGAGTCAGAAGCTAGTGAAACGACTGT
ATCTAGCTTCAATCCAATGCTTGAATTCATGTCAACTCATGCCCTATCCA
GTGAACCGATAAACAACGACAATACAACAAAGGGGACATCAGATGTTGTA
AAACCAAAAGACGATTTAAAGGATCTGATAACGAATTCAGCGGGCGTTGG
CGGGAGTGGTGTTAACCATTTTGAATTTGTGGTTGAGAAGATTTTTACAG
ATTACAAGAACCTTTTTCAGAAGGAATATAAGAATGAGAAGGAACATGTT
AAAAGGAAAGATATATTCAGACATAATTTGAGGTACATTAATCACAAGAA
TCGGCAAAATTTGACATATAAGTTACATCTGAACCATTTCGCGGATATCA
CAGACGAAGAAATGAAACAGTACAGAGGTCTTCTCAACGAGAGTTATGTT
GATCATAAAGCTGAACCTTTCAAAGCACCTCAAATCAATTATCACGGCAT
TGCAGTGCCTAAATCCTTAGATTGGCGAAAATATGGTGCCATATCGGAGG
TGAGTAGCCAGGGTATATGTGGATCATGTTATGCATATGCAGTGACAGGA
GCTGTCGAAGCTGGCCATTTCATAAAGACGGGGAAACGTATCAAATTATC
AGAACAGCAAATAGTAGATTGTTCATGGGGGTTCGGTAATCGTGGTTGTA
AAGGGGGATATCCTTACCGTGCCATGCAATGGAGCATTCAACACGGTGGA
ATTGCAACAAGTGAAAGTTATGGAAAATATCTAGCTCAGGAAGGTTATTG
TCATTTCGGGAACGTGACACACGGAGCAAAAGTTGAAGGATATTATAACG
TGACTAAAGGGAATGTCACGCAACTCAAACACGCTCTTGCTTTGTATGGT
CCTGTAACCGTTCTCATAAACACACGCCCGAAATCATTCAAATTCTACGA
TAATGGAGTTTACTACGACAAAGAATGTGATGACCGTTTGGATCATGCAG
CACTGGTAGTTGGATATGGAACTTCTGATACAGGTGAAAGTTACTGGTTA
ATTAAGAATTCATGGTCAGTTTCTTGGGGACATAAAGGTTTTATGAAGAT
TGCTATGCGGAATGATAATTGTGGTGTCACTCAAAAACCTGTCGTTGTTA
AAGTCAAGTGAAAGAAAAATTACTAGTGGAACAATCGAAACTCATGGTGA
ATACCCAAAAGCATGACCTTTCAAAATGATGATTTTGATACCCAGAGTGG
GTACTTGGGCAAAAAGTTCCCTTGCGGGTACCTTTTTGGGGGAAGTTTGG
GAAGAATAGTTATTAATTTTTGAGAAAATTTGTCTCACGTAGCATTTTTA
GAACCTCAATGGACCACCCCACCCCATCGCTCGGCAAAGTAATTCCCCCC
CCGGGTTGCGATGTCACTCAAAAATCAGTCAAAAGAAAGGAAATTTGTGG
AAAGATCACAATTCGTGATCCATATCTAAAGTAGTATTGCTTCATAAAAA
TTACCTATCTAAAAGATAACTGTGACAACACTTAAAAACCGTTCTTGTCA
AAGTCAAATATACCGGAAATTTCTGGACTGATTTAAACCCTTTCCGTGCC
GATGTCGGCATATGCCGACATGAGCATTTTCAATCTCCTTGCCATTGTCG
GGATTTACCGACATACGAAGTTTCGACCTATTTGCCGAAAATTTATCATT
TTTTACAAAATTTTTGTATTAGGTGGTTTGAAATGAAAAAAATGAATCGT
TACAAACTTTTCTATGTTGAAAAATAACTATTCTACAATGTTTAACTCAA
AATTATAGTCCTTGGCTAATACTTCATATATTATTCAGAAAATTAAGTCA
CAATCGCTACTTTTTGCCCATGTCTTTTTTTCCCGTGGCAAATAGGTTGA
ACCTTAAAAAATACGCATGGCAGTTAAAGGGTTAAAGAACACTATAATCA
AGAATGTCCTTGCTGAAAAGTTTCTGGAATGATCGAATTTTGGTTCTTGG
AGAAATTTCCGGGCTAATCGAATTGGTAAAACCTATGCTCCGGTGAGGCT
TATTTTGTTCTCCTAAAACTCATAAGATATACAAAGACTCATTCTTCCAT
ATtcaacataaacataaacagaTATGGaaagaattacaaaataaaGGATT
AGTAAAACATCATTTTATATGTATTGACCATACGTTCgaaacagataaaa
aataccggagagaaagaagaaaaaaacatctaaaaatatttcactgcCAT
TTGGTGTtgttttttctcgaatttttttctcttctaccTGCTTACGACAT
TTTTCCTACCTAGCCAACTCGCTAAAGAAAGTTGTCACACAGCGAATGTC
ATAGATGAGAGCACAATTCGTAGGAGTGAGAAAAAGACCAGGAGTGATAA
AACCATTGTATTAatttaatctcaaaaaattgaagattaaAATCACTTAC
TCAACTTCATTGTAGTTGGAAAAAGGTTTGCGAAAGTGTTTCTTAATTGA
CAAGAGTACTGGTGACAAACTTCTAACCTTCCCGAataaaaagatttgga
aatagTCCCCTTGTTCGTATTCTTTTCCAAAATATCATATATTTTGACAC
TACACTTACCCACCTACCCACGTAAAAGGTTACCGAAAATCTTTTAAAGC
AGTCCATGAAAAAACTCAGAAAAAGTCCTCTAAGTTGTCTTTGGTTCATG
GTGCAGTAATCGAGCAAtcgacataaaaaataatttacctcaaATTTAGA
TTTTCTGAATTTCGAGGGTCACTTTTATCGATATTTGCTCCGTGTTTTAC
ACACATGGAACTCAAAATAagaactcgaacccagtcccttagtatgattt
ttttatgattctgttggAGCTCAGCTCGCTTTTATATGAATAGCTATGAT
AGCTCTCACAAAAGTAATAACGTCCATTAGTAGAATCATAAAGTAGTGCA
AGTGGCTGTGGGTATATGAGATTGACAAGAATATTGACGTTTTTAATaag
atgtttttaattttttttaggtaGATActtattttgccatttttgtaaat
tgtaaataatgacaaatatttgatgaaaaaaattatttgtctTGACTATT
ATTTTATTTGAAGAACACAGCTGTATATGTGGCTTAGAATTAGGCCT
Run BLAST on NCBI

transcript from alignment at sc0000421:149251..161282-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022478 ID=TCONS_00022478|Name=TCONS_00022478|organism=Clytia hemisphaerica|type=transcript|length=12032bp|location=Sequence derived from alignment at sc0000421:149251..161282- (Clytia hemisphaerica)
TAGAAACCACACGGTTTGTTTACTTTGTTCAAAAATGTTCGAAGAACAGT
TTTAAACAGTTGAAACTGTAAAAAAGAAAGCTTTTTAAAAAAAATTAGGC
AAATTTAAGTCCTTATGACGTCATCATATGTTTCGCTATTTGACAAGTTT
ACGGAATGGAGATAATGATTGTGCTGAACAGCACCGAAACGAGGCTACTC
AAGATGGCGGCGAAAGGAATGGTGGAAAGCAAGGAAAATTTCAAACTTTG
TGCTCGTTTGCAATCAAGAAGACATTCAAGTGGTTGTTCTTTTTCTTTCT
AACTGGTAAGTTTTTGTACAACGTATTGGCCATAAAAAAGAAAACCATAG
CAGAAAAAGAAATTTTTTTCCATGAGAGAAGACTAATAGTAGAGATAGCA
GACAAGAAATGGCCAAGCCACCTCATTGAAGACTATGTGAAATCCAATGA
AAAATCTTTCAGATCTTACTGCTTTGTTCACCTTTAAGATGGTCATACAG
ACAAGGCAGCAAGACTCAATTTCTCAACCATTTTCTATTTTCAAGCAGTA
GTATTCCTAACTGGACAGTACATCCTAGCCGGGAAACTGATCAACAACGA
TATTTTTCCACCAAGAGAACAACAAGGATATTTCTATACGAAACAACGCC
GAAACGTTAATTCCAATACGTCAAATGAAGGTCAAGGAATTCAAAAACTA
CAATTTCCATCGACTTATCATGTCTTTGGGGTATTGAAACTACCGTATGG
GAACATCAATGAACCTTTTGAAGCATGGTACTCGAGAGATGAGAAGATGA
GCAGAATAGATTATTATGGAGGTTTGTTTGAATACTTTTTTATCAAATAC
CTTATTTCTTAGGCTGGTAAAGAGATCTTCGGTAGCTTGAAAAGTTTCAC
CGAAAGTTTCAATGATCTTCTGAAAAATTGAGTTTTCATGAACATTAGAG
AGTTTATGCATGGCTATGTGAGTTATCATATATTGATCTGTTAATACCCT
GACTATAACTGAGGACGATGGTTAATCAAAGTNAATTTCAAACTTTGTGC
TCGTTTGCAATCAAGAAGACATTCAAGTGGTTGTTCTTTTTCTTTCTAAC
TGGTAAGTTTTTGTACAACGTATTGGCCATAAAAAAGAAAACCATAGCAG
AAAAAGAAATTTTTTTCCATGAGAGAAGACTAATAGTAGAGATAGCAGAC
AAGAAATGGCCAAGCCACCTCATTGAAGACTATGTGAAATCCAATGAAAA
ATCTTTCAGATCTTACTGCTTTGTTCACCTTTAAGATGGTCATACAGACA
AGGCAGCAAGACTCAATTTCTCAACCATTTTCTATTTTCAAGCAGTAGTA
TTCCTAACTGGACAGTACATCCTAGCCGGGAAACTGATCAACAACGATAT
TTTTCCACCAAGAGAACAACAAGGATATTTCTATACGAAACAACGCCGAA
ACGTTAATTCCAATACGTCAAATGAAGGTCAAGGAATTCAAAAACTACAA
TTTCCATCGACTTATCATGTCTTTGGGGTATTGAAACTACCGTATGGGAA
CATCAATGAACCTTTTGAAGCATGGTACTCGAGAGATGAGAAGATGAGCA
GAATAGATTATTATGGAGGTTTGTTTGAATACTTTTTTATCAAATATGGT
TAATCAAAGCTATTTCACCGTCCACGATCTTACCCCTTAAGATTCTAATC
TACGACTCCTCCTTATGATCAACTCACCGCTTGATCTTTGAATTTCTGTG
TTGTTTTTTAAGGTTTTCGGGACTATTTAGGCATTTTTTCATTTTTCAGA
ACCTTATAAGATTGTTTTGAATCTTTTGAGATTTTGGAGTGGATTGTTAC
TCGCTTTTAAACAAAAAAAAACCCAGTAAACTGGAAACATCCCAATAAAC
AAAACAGTTTATTACTTGGATATCCAGACTATGTTTCAGATGCAAAAAAG
AAAATACATAAAAGAAAAAAAAATACATTAACAGGGTTTTAAATTTTATG
AAAAAATAATCCGTTGAAAGCTTTTTCTCTCCAAAAATAACTTAAATCAT
TCTTCAATCAGTGATCGTAACTGGAATATTAAAATTAGAATATACCGAAA
ACAACATCATTATTCTTTTTGAGAACAGATGTAAAAACGTTTGTTTTCAC
ATAAGAAATTCACGCGAAGAAAAATGAGGCACGTGTCATGGTGCTTTGTA
CTCGTATGTAACCAAAGGAAAAAGGAACCCATGAGTTATTAGGCGTAGGG
CGTAGGGCGTAGGGCGTTAAGCATTAGGCGGGTCACATTCATGGAGTTTG
CTTTGCTTTTGATAGGGCTGGCGAATTCTTAGCTATCCCATTGTATTGAT
TAGTGTGAATATGTACTTGAGGCGGCGAATCGAATAATTTTTATGTTTTT
TTATAAGAACATCAAAATATTTTGAAGCATTCCGATGTTCAAAACATATT
CTTATCTTCATCATTTTGAGAGTAATTTGGCAATCTTCCCAAAAATTAGG
TGTTTTAGAGCCCCCAAAGGATTAAGATGTTCTTAACTTGTTCTTAATAT
TACTGTCGTGGAAGCATTGTGTGTTCCTATATAGATCGCTCTTATAAAAA
ACGTGTAGGGGTGCTAACAATGTTTAGTGGGGTGACAAATTTATACTATG
TTTGAATTCGAAAGGGATGGATAGGACTTACCAGCGAGAAGATTTATCCA
GTTATGGATTCGGTGCAAAAGTCATCCCAGAATTTTCAGAAAAAAAGAAA
AAGATATTCCGTGGTTGTTTACATCACGTAGGGACCAGAAAGTTTCCAAT
CAAAGCACAAAGTATTATTCCAAATGAAAACGCATTTAAAGTAAGTATCT
AAATTTAGTACGCATTCTTTATAATAAAAACATCCCGAATTTTTTACTGA
ATTGTCTTTATTTTTGAGTTTTAAATCTAAAATTTTTTTTAAAATATTCT
TAATTTCATCATTTTGCCAGGATTTTTGTGCAGTTTCATACGAAATTGGG
TGTTTTAGGGTCCATAAGGCCTTAAAATGCTCTTAACTTGTTCTTAATAT
TTTGGCCATGAAAGCCTTATGTTCTTATATAGTTTGTTTTCATAAAAAAC
GTGTAATTTTTTCTTTCAAAACTCCTTTTCGATTTCTCTATAATGATTTT
GAAAGCAGGTATGTGAAAGAGGTTCCCAACCATTGACCATTAAACTGAAA
ATCAGGATAATTTCCTTAAAGTAATAACACTGGCTCGACGAGTATCTAGG
AAGCCAGTGTAACACTTGAAGATTCTTATTCCACACTTCATCAATGTAGC
CGCCAGGAGCGCTAGTTGACACGTCTTATTGAAATAGAGAATTTAATCTT
CAAAATTCCAATTTTTCACGTTTACAGTTTAGCGGAAAATGCACATTCAA
CAAAACAATACCTTGCTATAAATGGAAACACACTTTCAAAGTTTTAACAA
AAATCAACAGTTACACCCTTTACACCACAAGAGACCAACCGACCATCCCT
CTCCGATATGATATGATGGGTTATGATACATTATTGGCATCTTACTATGA
TAAATACATCTTAATGTATACCAAATTTGAACCATGGAAATTCGATTTCT
CAGTCTTCGAAATACCCTCCGGTAAGTTACATTACATCACAGACCCGGTA
GGATCCTTCCCTGTTGAAAATCTTTCCAAAATATCGTCCCAGTGGGAAGT
TTTTGTCCCCGCTGAAAATATTCAAAAACCACCTAAATGCAAAAAACTGT
TTTTAGTGTACTTTCGACGACCTGATACAAGGGATTCCGGTGCAGGAACC
ATTCAGTTCCCAGCTGGCTCACAAGGTTGTTTCTACGTTCATCTAACGTT
ATATGGACATTGATACTACCAGTCCACAAATGTTGATATTTTTTTATACT
GGTTGATTTTCAGAGCTCTCAATGATGATGGGTTTATTTGGAAAAATAAA
GTGTAAAAAAAAAAAAATCTTTGAGTTTTTTTACCTTTTACTAGACGTCC
ACTGTTTCGATCTGAGCGGCGAGTCAGAAGCTAGTGAAACGACTGTATCT
AGCTTCAATCCAATGCTTGAATTCATGTCAACTCATGCCCTATCCAGTGA
ACCGATAAACAACGACAATACAACAAAGGGGACATCAGATGTTGTAAAAC
CAAAAGACGATTTAAAGGATCTGATAACGAATTCAGCGGGCGTTGGCGGG
AGTGGTGTTAACCATTTTGAATTTGTGGTTGAGAAGATTTTTACAGATTA
CAAGAACCTTTTTCAGAAGGAATATAAGAATGAGAAGGAACATGTTAAAA
GGAAAGATATATTCAGACATAATTTGAGGTAAGCATGCTTCTTTTGATTG
AATAAATGAAAAATATGCCTCTAAATAACGGATACGATCGAGGAAACGGG
TCATTGCCCGCTAATTAGAAGTGTTCGCCTTTTAGAGACTTATGATCTAG
GACCTTAGACTAATAAGGCCATGTGTCGTAAACATAATATTTCAATCTTA
AGTACTATCTAGAGGTACTAGAACATAGAAGAATGAGGTTCACTCAAGGC
TACCATCGTCTTTTCTGGTATGTTTTGATATCAAAACACTATTTCAGGAT
GCGTGCATTCATTCTATCATTCTGTTGAAAAGCTCCGAGCCTTCTAACAT
ATCGGGGACATGAAACTTGGTACTCTAATATATGTTTACTCTTTATTATC
AAAGCAAATGAATCGTTTCATTCTTCGTTTCTTCTCAATTTCTCTACTGT
TATAGGTACATTAATCACAAGAATCGGCAAAATTTGACATATAAGTTACA
TCTGAACCATTTCGCGGATATCACAGACGAAGAAATGAAACAGTACAGAG
GTCTTCTCAACGAGAGTTATGTTGATCATAAAGCTGAACCTTTCAAAGCA
CCTCAAATCAATTATCACGGCATTGCAGTGCCTAAATCCTTAGATTGGCG
AAAATATGGTATGCCAGCTACTGGCCATCTCTAACAGATTAACACTCCTT
TGCAGAGGTCTATGATTCAGCCTAAGAACAACTTGTCACTCTTTAAACTG
TTTACCTTTTAAATAAATAGCAAATCTTCTTTCAAATGGAATAAAAAAGA
CATCAGTCGTCCCTACAGTAGATTTCACGGACGAGACCTAAAATCTTTTG
AGGTCCGTGAAATCCCAAAAGTATGAAAGTATAATGAACTTACGACTTCA
CGTTTAAAGGTGCCATATCGGAGGTGAGTAGCCAGGGTATATGTGGATCA
TGTTATGCATATGCAGTGACAGGAGCTGTCGAAGCTGGCCATTTCATAAA
GGTAGGTTGTCGGATGATAGNAGCCAGGGTATATGTGGATCATGTTATGC
ATATGCAGTGACAGGAGCTGTCGAAGCTGGCCATTTCATAAAGGTAGGTT
GTCGGATGATAGAATGTGTGTGCCCTGAAAAATGAAATCTTGATTTAAGA
TTTATGTTGAGGGTGCTTACCCATGACAAATGTCCTTGAAGGTATTTAGT
GGTTTTCATAAATCTAATTCTTCCTTTTTTTATGTTCTACAGGCATTGAT
TGGATATCTCATGAATAGTAATTAAAAGGACTAGTATTCTTGAATTCCGT
CTGAGAGGCCTGAGTTCGATACCTATTCCATGTCAATGCACCTCCTCTTA
AATTACACCTTTAAACCAGCTACCAGAACGAATGCATTTTTATATAGATT
TAGAATTTTGTCGTATTTTATTGAATTTAAGAGTTGTCCAGTAAAATTTG
ACAGAATAATGAATTCTCACAGCAAATAATATTCTAACATGTTTAAGCAT
CAAATAGTGTCGCTAATATTGCCGAAATTTGACCAAAGTCTTACTTGGAC
TTTTCTTGAAAAAATCTGAATATTTGGGGTGGAGGATATAACATTTATTT
TGGAAATTTACCCCCCATAGAGCAGGTCCAACTCCCCGAACAAACATTAT
ACATGACTCGCACCCCCCCCGCCTGAGGGGGGAGCTACAAAATTTGTCAT
ATAAGAGGTGGGAGCTGCTTGTTTTTCCCGACAGGCGGGGGGGGGCTCTA
TCTTGNGGACCTAAAATTTTATCAGGCTGGGGGGACCTTGTTCTCAGGGG
GGACCTAAATTTGGCGGGGGGACCTAGAACCCCAGTCGGAGCCATGTTAG
TTGACCCCCTGAACACTCAAAATTACCCTCAAACGGAACAAAATTACCCC
CTAACAGAGATGTTTAACCCCCGGACAAGGAAAATTTGCAGATTTTTCTC
TACACCGGAAACTATATCCTCCACCCCCCCCATGTACGAACATTTTCTGG
AAGAGCCTCTTTCAACATCATCATTATTCTTTAGACGGGGAAACGTATCA
AATTATCAGAACAGCAAATAGTAGATTGTTCATGGGGGTTCGGTAATCGT
GGTTGTAAAGGGGGATATCCTTACCGTGCCATGCAATGGAGCATTCAACA
CGGTGGAATTGCAACAAGTGAAAGTTATGGAAAATATCTAGCTCAGGTAA
GTTCACCACTTGGGGAGGGAGATATAACCGAAGGCTAGAGGCAAATCACT
TACGTAGGATTTGAAGCCACTTAAACTTCCACTTATATTACAGGGGTGTC
TCACAGCCCCGGTGAAACTTTTTCCTACAGAAGGGATAAAAATTGTGATT
GAAATCTTTTTAGGGATAAAAATTCTATTACTCCAAGGTAAAATAATTCC
ATAGGGATGGTTTTGGAACATTGAATTTCGAATGGGGACGAAATCAAAGT
CAATTTCTCAGTGGGGCTGAAATTCTAGGGTATTTTTCCAACCGGGGACA
AAATTTTTGCCAAATTTTATAGTGGGGCTGGGGCCCCCAGTGGGTCTGTG
ACACAGAGGTGTTATATTGAACTGCCCATGTTGTTTTCACGCAGATGCTA
TTTTGAAAGCATACATCTCGGATTTTAACGGATATCATATAAGTTGATGC
TTTCACCATATACAAGCAAAAGATTCCATTGTCTTTCTTTTTCTTCAATT
AATGCTCAATTTTTTTTGGAAGAATGGAGTCGTGTAAAGTAGACTTTAGA
AAGAGAGAGAGAGGAAAAAATAATCTTTTGCCTGAACCCTCAGAAGAGAA
AAAAGTTTCCGCAGTCTCATAACCATATGGCACAGGTTTCGAAAAAAAAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAATCCAGGAAGGTTATT
GTCATTTCGGGAACGTGACACACGGAGCAAAAGTTGAAGGATATTATAAC
GTGACTAAAGGGAATGTCACGCAACTCAAACACGCTCTTGCTTTGTATGG
TCCTGTAACCGTTCTCATAAACACACGCCCGAAATCATTCAAATTCTACG
ATAATGGAGTTTACTACGACAAAGAATGTGGTACGTAATATCTTTGTAGC
TCAAACTGGTACACAGTTCCTTAGGTCCCATTTTTAAAGGTCAAGCTCAT
TCCCAGTTCCTTAAAGTCTGTCTCAAAATAATTTGCAGCTGAGACAAAAA
TGGGTTGTAACTTTTGATAGAATTCGAATTAAGTTATGATTTTGTGCTCA
TTGAAAAGATATTTGTGAGTGGAATATTATCAAGCAAAAATAAATTTGAA
AAAACAAGAAAAATGAAAATGAAAAATGAAGAAGTTGATTTTTTTCTTCT
TCTTTTTTTATTTTCATTTTTCTTTATTTTTCAATTTTTTTTACAGTTAT
TTTTTGCCTCAGCTGCAAATTATTTTGAGACGCATATTTATGATTCTAAA
CTCTTTTTCCTCTATGTGTATATTTCACCAATATTCAACCTCGCTTTTGC
TATCGAAATTTTGTACATATAATGATGCATTCCCTCGTATTACTGTTTTT
CCAAATATTTTTAGATGACCGTTTGGATCATGCAGCACTGGTAGTTGGAT
ATGGAACTTCTGATACAGGTGAAAGTTACTGGTTAATTAAGAATTCATGG
TCAGTTTCTTGGGGACATAAAGGTTTTATGAAGATTGCTATGCGGAATGA
TAATTGTGGTGTCACTCAAAAACCTGTCGTTGTTAAAGTCAAGTGAAAGA
AAAATTACTAGTGGAACAATCGAAACTCATGGTGAATACCCAAAAGCATG
ACCTTTCAAAATGATGATTTTGATACCCAGAGTGGGTACTTGGGCAAAAA
GTTCCCTTGCGGGTACCTTTTTGGGGGAAGTTTGGGAAGAATAGTTATTA
ATTTTTGAGAAAATTTGTCTCACGTAGCATTTTTAGAACCTCAATGGACC
ACCCCACCCCATCGCTCGGCAAAGTAATTCCCCCCCCGGGTTGCGATGTC
ACTCAAAAATCAGTCAAAAGAAAGGAAATTTGTGGAAAGATCACAATTCG
TGATCCATATCTAAAGTAGTATTGCTTCATAAAAATTACCTATCTAAAAG
ATAACTGTGACAACACTTAAAAACCGTTCTTGTCAAAGTCAAATATACCG
GAAATTTCTGGACTGATTTAAACCCTTTCCGTGCCGATGTCGGCATATGC
CGACATGAGCATTTTCAATCTCCTTGCCATTGTCGGGATTTACCGACATA
CGAAGTTTCGACCTATTTGCCGAAAATTTATCATTTTTTACAAAATTTTT
GTATTAGGTGGTTTGAAATGAAAAAAATGAATCGTTACAAACTTTTCTAT
GTTGAAAAATAACTATTCTACAATGTTTAACTCAAAATTATAGTCCTTGG
CTAATACTTCATATATTATTCAGAAAATTAAGTCACAATCGCTACTTTTT
GCCCATGTCTTTTTTTCCCGTGGCAAATAGGTTGAACCTTAAAAAATACG
CATGGCAGTTAAAGGGTTAAAGAACACTATAATCAAGAATGTCCTTGCTG
AAAAGTTTCTGGAATGATCGAATTTTGGTTCTTGGAGAAATTTCCGGGCT
AATCGAATTGGTAAAACCTATGCTCCGGTGAGGCTTATTTTGTTCTCCTA
AAACTCATAAGATATACAAAGACTCATTCTTCCATATTCAACATAAACAT
AAACAGATATGGAAAGAATTACAAAATAAAGGATTAGTAAAACATCATTT
TATATGTATTGACCATACGTTCGAAACAGATAAAAAATACCGGAGAGAAA
GAAGAAAAAAACATCTAAAAATATTTCACTGCCATTTGGTGTTGTTTTTT
CTCGAATTTTTTTCTCTTCTACCTGCTTACGACATTTTTCCTACCTAGCC
AACTCGCTAAAGAAAGTTGTCACACAGCGAATGTCATAGATGAGAGCACA
ATTCGTAGGAGTGAGAAAAAGACCAGGAGTGATAAAACCATTGTATTAAT
TTAATCTCAAAAAATTGAAGATTAAAATCACTTACTCAACTTCATTGTAG
TTGGAAAAAGGTTTGCGAAAGTGTTTCTTAATTGACAAGAGTACTGGTGA
CAAACTTCTAACCTTCCCGAATAAAAAGATTTGGAAATAGTCCCCTTGTT
CGTATTCTTTTCCAAAATATCATATATTTTGACACTACACTTACCCACCT
ACCCACGTAAAAGGTTACCGAAAATCTTTTAAAGCAGTCCATGAAAAAAC
TCAGAAAAAGTCCTCTAAGTTGTCTTTGGTTCATGGTGCAGTAATCGAGC
AATCGACATAAAAAATAATTTACCTCAAATTTAGATTTTCTGAATTTCGA
GGGTCACTTTTATCGATATTTGCTCCGTGTTTTACACACATGGAACTCAA
AATAAGAACTCGAACCCAGTCCCTTAGTATGATTTTTTTATGATTCTGTT
GGAGCTCAGCTCGCTTTTATATGAATAGCTATGATAGCTCTCACAAAAGT
AATAACGTCCATTAGTAGAATCATAAAGTAGTGCAAGTGGCTGTGGGTAT
ATGAGATTGACAAGAATATTGACGTTTTTAATAAGATGTTTTTAATTTTT
TTTAGGTAGATACTTATTTTGCCATTTTTGTAAATTGTAAATAATGACAA
ATATTTGATGAAAAAAATTATTTGTCTTGACTATTATTTTATTTGAAGAA
CACAGCTGTATATGTGGCTTAGAATTAGGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012603XLOC_012603Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022478-exon-sc0000421-1575043694:161010..161282TCONS_00022478-exon-sc0000421-1575043694:161010..161282Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:160181..160212TCONS_00022478-exon-sc0000421-1575043694:160181..160212Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:159665..159937TCONS_00022478-exon-sc0000421-1575043694:159665..159937Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:158443..158618TCONS_00022478-exon-sc0000421-1575043694:158443..158618Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:157662..157905TCONS_00022478-exon-sc0000421-1575043694:157662..157905Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:156955..157288TCONS_00022478-exon-sc0000421-1575043694:156955..157288Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:156325..156527TCONS_00022478-exon-sc0000421-1575043694:156325..156527Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:155982..156073TCONS_00022478-exon-sc0000421-1575043694:155982..156073Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:154787..154948TCONS_00022478-exon-sc0000421-1575043694:154787..154948Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:151903..152092TCONS_00022478-exon-sc0000421-1575043694:151903..152092Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1575043694:149251..151418TCONS_00022478-exon-sc0000421-1575043694:149251..151418Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:161010..161282TCONS_00022478-exon-sc0000421-1510915933:161010..161282Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:160181..160212TCONS_00022478-exon-sc0000421-1510915933:160181..160212Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:159665..159937TCONS_00022478-exon-sc0000421-1510915933:159665..159937Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:158443..158618TCONS_00022478-exon-sc0000421-1510915933:158443..158618Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:157662..157905TCONS_00022478-exon-sc0000421-1510915933:157662..157905Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:156955..157288TCONS_00022478-exon-sc0000421-1510915933:156955..157288Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:156325..156527TCONS_00022478-exon-sc0000421-1510915933:156325..156527Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:155982..156073TCONS_00022478-exon-sc0000421-1510915933:155982..156073Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:154787..154948TCONS_00022478-exon-sc0000421-1510915933:154787..154948Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:151903..152092TCONS_00022478-exon-sc0000421-1510915933:151903..152092Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1510915933:149251..151418TCONS_00022478-exon-sc0000421-1510915933:149251..151418Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:161010..161282TCONS_00022478-exon-sc0000421-1491911889:161010..161282Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:160181..160212TCONS_00022478-exon-sc0000421-1491911889:160181..160212Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:159665..159937TCONS_00022478-exon-sc0000421-1491911889:159665..159937Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:158443..158618TCONS_00022478-exon-sc0000421-1491911889:158443..158618Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:157662..157905TCONS_00022478-exon-sc0000421-1491911889:157662..157905Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:156955..157288TCONS_00022478-exon-sc0000421-1491911889:156955..157288Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:156325..156527TCONS_00022478-exon-sc0000421-1491911889:156325..156527Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:155982..156073TCONS_00022478-exon-sc0000421-1491911889:155982..156073Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:154787..154948TCONS_00022478-exon-sc0000421-1491911889:154787..154948Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:151903..152092TCONS_00022478-exon-sc0000421-1491911889:151903..152092Clytia hemisphaericaexon
TCONS_00022478-exon-sc0000421-1491911889:149251..151418TCONS_00022478-exon-sc0000421-1491911889:149251..151418Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000421supercontigsc0000421:149251..161282 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.000808922	0	0	0	0.0089766	2.62024	1.74464	0.0601381	0.0416528	0.118798	2.71982	3.42097	3.12771	0.748293	8.613	3.39169	0.154477	0.000927147	0.000825248	0.14912	8.39735e-06	0.10546	0.0746656	1.18657	5.08119	0	0.0209332	0.00169434	0
Blast
[Close]
BLAST of TCONS_00022478 vs. Swiss-Prot (Human)
Match: CATK (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.104e-55
Identity = 118/310 (38.06%), Postives = 178/310 (57.42%), Query Frame = 2 
Query: 1223 EFVVEKIFTDYKNLFQKEYKNEKEHVKRKDIFRHNLRYINHKNRQNL----TYKLHLNHFADITDEEMKQ-YRGLLNESYVDHKAEPFKAPQINYHGIAVPKSLDWRKYGAISEVSSQGICGSCYAYAVTGAVEAGHFIKTGKRIKLSEQQIVDCSWGFGNRGCKGGYPYRAMQWSIQHGGIATSESYGKYLAQEGYCHFGNVTHGAKVEGYYNVTKGNVTQLKHALALYGPVTVLINTRPKSFKFYDNGVYYDKECD-DRLDHAALVVGYGTSDTGESYWLIKNSWSVSWGHKGFMKIAM-RNDNCGVT 2131
            E +++  +  +K   +K+Y N+ + + R+ I+  NL+YI+  N +      TY+L +NH  D+T EE+ Q   GL          +    P+  + G A P S+D+RK G ++ V +QG CGSC+A++  GA+E     KTGK + LS Q +VDC     N GC GGY   A Q+  ++ GI + ++Y  Y+ QE  C +      AK  GY  + +GN   LK A+A  GPV+V I+    SF+FY  GVYYD+ C+ D L+HA L VGYG    G  +W+IKNSW  +WG+KG++ +A  +N+ CG+ 
Sbjct:   19 EEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPE--WEGRA-PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNRGIDSEDAY-PYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 321
The following BLAST results are available for this feature:
BLAST of TCONS_00022478 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CATK2.104e-5538.06Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
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