TCONS_00022498 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00022498
Unique Name	TCONS_00022498
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1555

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000424:65203..70234+
coding sequence from alignment at sc0000424:65203..70234+

transcript sequence

>TCONS_00022498 ID=TCONS_00022498|Name=TCONS_00022498|organism=Clytia hemisphaerica|type=transcript|length=1555bp
gatttcttgatctaCAAAAGtaatcaaatacgacagagatagaacaacag
aaattcagatgttatcattccagccgcggctttcttatactatgcctTAA
CGTACGAGTTTAGTACATAGGTAAAAAATGGTTTATTACTTCAGAAGGAA
ATtcacaaaatgtttttaatCCACTCTTAAGGACCTCTCAAAACAGATCA
TTATTATTTTCTCTAATTAGCATTAAATATGATCTGTTGATTAGTGCGTG
ACATACATGGAGTAATCAGTATCTGCCCGGAGAAAACCCCTGTTTCATTC
CCTTTACTCAAACAATTTAGATATATTCACTGTTAATTTCATTGCATGCA
GATAGGTGATCAACCACAAGAAAAACGAACGAAGAGTCCACCGCAACCAG
CTCCGGTGCCTCTCAAACGTGGTCAAAAGaaaaagttgaaaaagatgAAG
GAGAAATATAAAGATCAAGACGAAGAAGATAGACAGCTCATGAAAGAAAT
TCTACAATCTGGAGGATCGGAGAAACTTTctaaaaagaaagcaaaagcCA
ACGCGTCCAAGATGATGAAACAAACAGGCGTTACcaagcaacaacaacaa
aacaaagttaaaaaacACAACCTCGTCGCCATGGATATTTTGCACCAAGA
AGAGGCCGAGATACCTTCGGGAACCAAAAATGCTGACATTGGCaataatg
aaaatgaagatgaagaagaagacaaagaagaaaaacaagatCAAaatGAA
AATATATTGGACACATTAACAGGACAACCGATAGGGGATGATTTGTTATT
GTACGCCGTACCCGTGTGTGCACCCTACAGTTGTATGCAACCTTACAAGT
ACAAAGTGAAAGTGACACCAGGCACCGGAAAACGTGGACGTGCGGCTAAA
TCAGCTATCCATATGTTTCTTCAGGCTAAAGAAGCCACTGACTGGGAAAA
AGATTTACTCAAAAGTTTAAAGGATGTGGACATATCAAGAAATATACCAG
GAAAAGTCAAAATTTCTGCACCCAATATGCAAAGGATCAAGAAGAAATAA
CAATCTGAGGTTTCAACTCTTGAGGTTAAGCTTTGATATAAAGCACTGGT
GGAGGATATTTGCTCGTAAGCAACCTTGCCTCTGGGTCCTGCTTTGGTGG
AAGGAAGGAATGAACTGTGCGTTGGATCATGATGGAAAAAGACTTTGTCC
TGCGAACGATTTGGTATTATTCGACACGATAGATGGTGATCAATTAAATT
GACTGTTTTTGGCTGGGATGGATTGATAAGAATGGTTGGCTCTGATATCC
TCTACGAAAACATGACAATGGTATTCCTTTTCCAAAGAAACATGATGATG
ATTATGTCTGATTATTGATTGGTAATTACGcattgacatttttttggtcG
GCATGGTTTCGTGATCTCGTTCAGTTACAAAACTGTCAATACTCtacaaa
tttcatgctttattggctTTTAATGGCTTTTTTCACTGGCTGGGTtggta
ctctcgggtgcctaataaacagGATTCGGAAAAAAGGGGGGCTAATTATC
GGGGG

Run BLAST on NCBI

protein sequence of TCONS_00022498-protein

>TCONS_00022498-protein ID=TCONS_00022498-protein|Name=TCONS_00022498-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
MQIGDQPQEKRTKSPPQPAPVPLKRGQKKKLKKMKEKYKDQDEEDRQLMK
EILQSGGSEKLSKKKAKANASKMMKQTGVTKQQQQNKVKKHNLVAMDILH
QEEAEIPSGTKNADIGNNENEDEEEDKEEKQDQNENILDTLTGQPIGDDL
LLYAVPVCAPYSCMQPYKYKVKVTPGTGKRGRAAKSAIHMFLQAKEATDW
EKDLLKSLKDVDISRNIPGKVKISAPNMQRIKKK

Run BLAST on NCBI

transcript from alignment at sc0000424:65203..70234+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00022498 ID=TCONS_00022498|Name=TCONS_00022498|organism=Clytia hemisphaerica|type=transcript|length=5032bp|location=Sequence derived from alignment at sc0000424:65203..70234+ (Clytia hemisphaerica)
gatttcttgatctaCAAAAGtaatcaaatacgacagagatagaacaacag
aaattcagatgttatcattccagccgcggctttcttatactatgcctTAA
CGTACGAGTTTAGTACATAGGTAAAAAATGGTTTATTACTTCAGAAGGAA
ATtcacaaaatgtttttaatCCACTCTTAAGGACCTCTCAAAACAGATCA
TTATTATTTTCTCTAATTAGCATTAAATATGATCTGTTGATTAGTGCGTG
ACATACATGGAGTAATCAGTATCTGCCCGGAGAAAACCCCTGTTTCATTC
CCTTTACTCAAACAATTTAGATATATTCACTGTTAATTTCATTGCATGCA
GATAGGTGATCAACCACAAGAAAAACGAACGAAGAGTCCACCGCAACCAG
CTCCGGTGCCTCTCAAACGTGGTCAAAAGGTTTGTAATATTGATTACCTT
TCGGTTGAAATATATAACACACTGTTTACACATTGGGGGCTTTGATTTGA
ATGATGCCAAAATTTTGATGCTCAAAGAGCTGAATATTGGATTTTTAGAT
ATCAAAACTGTGTTTGAGCATGGGTTTAATCCATGAGTGTCTGCTTCTGA
CCAAACGTTGGATTCTGTGATACTTTCCTAGGACACACCACTGTTAACTA
AATAGGGCCTTTAACTAACGCTCAAACTTGTAGGATGTAGGGGATTCACT
ATAATATGAAGACAGGAGGGGATTAGGCATTACGACATCTCGAGTACAAC
TAACAATCAAGATAGAAATGTTAACGATTCTCTTTCAAAAGCATTCCATT
AAATATTGTTTTATATCAAGAAATGAAGAACTAACTTACTAACAATTACT
ACATGGTGTTTCATGCTGGCGCAATCTTCAGGCAGTGCAGGTGTATTGCA
GATTTTCTTTCAATCgaaatgttaaataaaatctACAATATACCTGCATT
GTCTGAAGATTGTGCCAGCATGAAACACCGTGTAGCAATTgtaagttagt
tctttatttcttgcGGAAGCCCATTAGGGCCAACACCTTGAATTGGAAAA
AATATTCCGCGCTTCTATTTTAATCAGAAACGCTATTCCTTTTTCTTCCG
CGCTGCAACTTAAACATGAAGCACTACTAAAAGATCTTCCGCTCTCTTCA
GcgcgaaatattttttccaCTTCAAGGTGCTGGCCCTAATGGGCTTCCGT
AATTTCTTgatatttcgaaatttttcgaATTTCCCTGGAGCACTTTGTGA
TTCTATTTACTTCACAATATTGTTTtatagaaaaagttgaaaaagatgAA
GGAGAAATATAAAGATCAAGACGAAGAAGATAGACAGCTCATGAAAGAAA
TTCTACAAGTAAGCAACACTCTCTGGCGTACTGGATAAAGCTCTTTGTCT
TTCCtttatttctttaaagaaaatgaaTACCTAGAAACTAAAATTAAAAC
TGCATTTTCAGTTTTCTCATCAAAATGGTGACCTTTCTTGTGATAAGgga
tattttctttctttgacgGATCAGCGATGGATTTTAGGGGGATCACAATT
TATGGCtgaaattttagcttttttattcGGTGTAAATCATCTTTCATCCT
CAAATTCACCACTACTTGCCCGAGTAATTCTTTCTAATAATGATAATCAT
CGTGATAGGTATCATCATCGATACCAGcacggctctgatgtgtcgcgaTG
TCCggtaagcgctgtgatttccctatctaggggtaggaaactatcccggg
atagggccCAGTCCAATGATATCGGAGCATCCGCTTCTCTCTTCTCTCGA
TTTAAAAAACATTATAAGGATTAAATGTTGTAAGTTTTATAACGCGAACT
CATGCTCTCAattggcttttccagaaaaaaaccgtacaccACCTGTTGAG
Gtgctccaaccttttgtgaactacccccttggaattccaggcaagtttag
gatcatacccctctggaattccgaatttttacagattttcaatcattacc
cccatggaattccacttatttttgacggatttttgtctactgctatggaa
ttccactgcatttcaaaccataccccgcttggaatggaaatggactcctc
aacagggggtgtacggtttttttctgaaaaaagccCAATTTTACTTTCAC
AGTCTGGAGGATCGGAGAAACTTTctaaaaagaaagcaaaagcCAACGCG
TCCAAGATGATGAAACAAACAGGCGTTACcaagcaacaacaacaaaacaa
agttaaaaaacACAACCTCGTCGCCATGGATATTTTGCACCAAGAAGAGG
CCGAGATACCTTCGGGAACCAAAAATGCTGACATTGGCaataatgaaaat
gaagatgaagaagaagacaaagaagaaaaacaagatCAAGTAAGTTTTAT
CAGCCAAGCAATTATCGGTGGAATCAACCTTCACAAAGACTACCTGACCA
GGCTAATGTGTATTATCGGGCCCAATCAATAATCTCATCTCTACAAAAAA
TGTTAATTGTTAACCTATGTTTTTCTCCGATAAAATGACTACAGGGCTAA
ATTTGCATCACTTCATTCGTTCAACTTTTCTCCTTCTTTAACATATATGC
CCATTCATAACCATTtcaataagaacaaactatataagaacataaggctt
cgattgccaaagtcataagaacaagttaaggatgttcttataaaaacgtg
tatgtcttgaatttgtaatttttatcaCAGCCTTGGTCATGTGATGATTT
TGCACGATCCATTTGGGATTTTATCGAGATAcgatattcttttatatttt
tttagaatGAAAATATATTGGACACATTAACAGGACAACCGATAGGGGAT
GATTTGTTATTGTACGCCGTACCCGTGTGTGCACCCTACAGTTGTATGCA
ACCTTACAAGTGAGTGCATGAATTTGAACAATAGCTAGGTCattgtcatt
ataaaaaacgccagtcttgggattggtctattttctaatcacatgatcaa
aaagtttgaaaaatcaatcgATTTTGGTgcgtactctcgggtacttaata
gccgtcccccccccgctaattaatttttcgaaaattttccacccaggaca
ttcttattccaacccccccgcttattaaNACCTTACAAGTGAGTGCATGA
ATTTGAACAATAGCTAGGTCATTGTCATTATAGAAAACGCcagtctggca
atgtattgttttatctttttgttcaattttcttttgttacaaaaaaaaga
caagttgcgatttgtatactttttgatcacgttaccgaAATCttctcttg
ggattggtctattttctaatcacatgatcaaaaagtttgaaaaataaatc
gattttggtgcGTAAGCTCCaactttaacaataaaaagaaacaaaagact
tccagaccagtgtttttataatgactatggttagTTTAAGCATTAGGATG
TTCACGACGTACCCCACCGGGCTGTTTATTGTAGTCCCGGAATCGCTTTT
AGTTTTTACCAAAGACAAATTCATCTTAAGTTTGGGAAAGTTCGTTTCAA
CACTTATTATCTTTCCATCATTTCAACTTTCTTCTTTGTCATTGTTTTTG
TATCCTTGTACGACTCTACTCTTCTATATGATGCACACGTTTGTTATAAA
CGCTGCACTCCTCATTTATCGATTATAGGTACAAAGTGAAAGTGACACCA
GGCACCGGAAAACGTGGACGTGCGGCTAAATCAGCTATCCATATGTTTCT
TCAGGCTAAAGAAGCCACTGACTGGGAAAAAGATTTACTCAAAAGTTTAA
AGGTAATTCAAATCTTTAATTAAATATACCTTTTGTAGGGCATGATGGGT
TCATGTTGaatataattaaaaactctaCTGATTCCAGCACCAAAACAATG
ATAATATTTAGTACATGTATTTACAAAATATGCTTTCTTGTGTTACTGCA
AGAAGTGGGaaagttaaatttttgaaaaatatttccccCAACATCTGGAA
TGTAGAAAgaacttcagaaaaaaaaaacacaaatacaAGTGCTTGTAATC
TGAACTAGCTTTGTTTAACAATCTAATTTGTTATTGTTCATAATTCACAT
TCTTTACTACTACACATTTTACAGTACTAGGTTCCTGGCAAAAAAGTGTC
TAGTAGAATAAACTTTCTGTATTTTTGAGAAAGTAACTTGCGTTTCCATA
TGAGAGCAAGGAACCAATCTGAAAGGGAGTGCTCTTTTTTTCGGACCTAC
CTCCGAGACCCATTCTGTGTTCTGAAAAATGGCCGAAACAATTCTTCCAA
CAATTATTCGCCTATTTTGCTTCTGTGCTGGACATTATttcttctctagt
tttattttTATCCGACTcttatcatcaggtaggtccattcagcatgtggC
TTAGttgttaaatttaattttgttcATAATTCTTATTCTTGACATTCAGG
ATGTGGACATATCAAGAAATATACCAGGAAAAGTCAAAATTTCTGCACCC
AATATGCAAAGGATCAAGAAGAAATAACAATCTGAGGTTTCAACTCTTGA
GGTTAAGCTTTGATATAAAGCACTGGTGGAGGATATTTGCTCGTAAGCAA
CCTTGCCTCTGGGTCCTGCTTTGGTGGAAGGAAGGAATGAACTGTGCGTT
GGATCATGATGGAAAAAGACTTTGTCCTGCGAACGATTTGGTATTATTCG
ACACGATAGATGGTGATCAATTAAATTGACTGTTTTTGGCTGGGATGGAT
TGATAAGAATGGTTGGCTCTGATATCCTCTACGAAAACATGACAATGGTA
TTCCTTTTCCAAAGAAACATGATGATGATTATGTCTGATTATTGATTGGT
AATTACGcattgacatttttttggtcGGCATGGTTTCGTGATCTCGTTCA
GTTACAAAACTGTCAATACTCtacaaatttcatgctttattggctTTTAA
TGGCTTTTTTCACTGGCTGGGTtggtactctcgggtgcctaataaacagG
ATTCGGAAAAAAGGGGGGCTAATTATCGGGGG

Coding sequence (CDS) from alignment at sc0000424:65203..70234+

>TCONS_00022498 ID=TCONS_00022498|Name=TCONS_00022498|organism=Clytia hemisphaerica|type=CDS|length=4230bp|location=Sequence derived from alignment at sc0000424:65203..70234+ (Clytia hemisphaerica)
ATGCAGATAGGTGATCAACCACAAGAAAAACGAACGAAGAGTCCACCGCA
ACCAGCTCCGGTGCCTCTCAAACGTGGTCAAAAGaaaaagttgaaaaaga
tgAAGGAGAAATATAAAGATCAAGACGAAGAAGATAGACAGCTCATGAAA
GAAATTCTACAATCTGGAGGATCGGAGAAACTTTctaaaaagaaagcaaa
agcCAACGCGTCCAAGATGATGAAACAAACAGGCGTTACcaagcaacaac
aacaaaacaaagttaaaaaacACAACCTCGTCGCCATGGATATTTTGCAC
CAAGAAGAGGCCGAGATACCTTCGGGAACCAAAAATGCTGACATTGGCaa
taatgaaaatgaagatgaagaagaagacaaagaagaaaaacaagatCAAa
atGAAAATATATTGGACACATTAACAGGACAACCGATAGGGGATGATTTG
TTATTGTACGCCGTACCCGTGTGTGCACCCTACAGTTGTATGCAACCTTA
CAAGTACAAAGTGAAAGTGACACCAGGCACCGGAAAACGTGGACGTGCGG
CTAAATCAGCTATCCATATGTTTCTTCAGGCTAAAGAAGCCACTGACTGG
GAAAAAGATTTACTCAAAAGTTTAAAGGATGTGGACATATCAAGAAATAT
ACCAGGAAAAGTCAAAATTTCTGCACCCAATATGCAAAGGATCAAGAAGA
AATAAATGCAGATAGGTGATCAACCACAAGAAAAACGAACGAAGAGTCCA
CCGCAACCAGCTCCGGTGCCTCTCAAACGTGGTCAAAAGaaaaagttgaa
aaagatgAAGGAGAAATATAAAGATCAAGACGAAGAAGATAGACAGCTCA
TGAAAGAAATTCTACAATCTGGAGGATCGGAGAAACTTTctaaaaagaaa
gcaaaagcCAACGCGTCCAAGATGATGAAACAAACAGGCGTTACcaagca
acaacaacaaaacaaagttaaaaaacACAACCTCGTCGCCATGGATATTT
TGCACCAAGAAGAGGCCGAGATACCTTCGGGAACCAAAAATGCTGACATT
GGCaataatgaaaatgaagatgaagaagaagacaaagaagaaaaacaaga
tCAAaatGAAAATATATTGGACACATTAACAGGACAACCGATAGGGGATG
ATTTGTTATTGTACGCCGTACCCGTGTGTGCACCCTACAGTTGTATGCAA
CCTTACAAGTACAAAGTGAAAGTGACACCAGGCACCGGAAAACGTGGACG
TGCGGCTAAATCAGCTATCCATATGTTTCTTCAGGCTAAAGAAGCCACTG
ACTGGGAAAAAGATTTACTCAAAAGTTTAAAGGATGTGGACATATCAAGA
AATATACCAGGAAAAGTCAAAATTTCTGCACCCAATATGCAAAGGATCAA
GAAGAAATAAATGCAGATAGGTGATCAACCACAAGAAAAACGAACGAAGA
GTCCACCGCAACCAGCTCCGGTGCCTCTCAAACGTGGTCAAAAGaaaaag
ttgaaaaagatgAAGGAGAAATATAAAGATCAAGACGAAGAAGATAGACA
GCTCATGAAAGAAATTCTACAATCTGGAGGATCGGAGAAACTTTctaaaa
agaaagcaaaagcCAACGCGTCCAAGATGATGAAACAAACAGGCGTTACc
aagcaacaacaacaaaacaaagttaaaaaacACAACCTCGTCGCCATGGA
TATTTTGCACCAAGAAGAGGCCGAGATACCTTCGGGAACCAAAAATGCTG
ACATTGGCaataatgaaaatgaagatgaagaagaagacaaagaagaaaaa
caagatCAAaatGAAAATATATTGGACACATTAACAGGACAACCGATAGG
GGATGATTTGTTATTGTACGCCGTACCCGTGTGTGCACCCTACAGTTGTA
TGCAACCTTACAAGTACAAAGTGAAAGTGACACCAGGCACCGGAAAACGT
GGACGTGCGGCTAAATCAGCTATCCATATGTTTCTTCAGGCTAAAGAAGC
CACTGACTGGGAAAAAGATTTACTCAAAAGTTTAAAGGATGTGGACATAT
CAAGAAATATACCAGGAAAAGTCAAAATTTCTGCACCCAATATGCAAAGG
ATCAAGAAGAAATAAATGCAGATAGGTGATCAACCACAAGAAAAACGAAC
GAAGAGTCCACCGCAACCAGCTCCGGTGCCTCTCAAACGTGGTCAAAAGa
aaaagttgaaaaagatgAAGGAGAAATATAAAGATCAAGACGAAGAAGAT
AGACAGCTCATGAAAGAAATTCTACAATCTGGAGGATCGGAGAAACTTTc
taaaaagaaagcaaaagcCAACGCGTCCAAGATGATGAAACAAACAGGCG
TTACcaagcaacaacaacaaaacaaagttaaaaaacACAACCTCGTCGCC
ATGGATATTTTGCACCAAGAAGAGGCCGAGATACCTTCGGGAACCAAAAA
TGCTGACATTGGCaataatgaaaatgaagatgaagaagaagacaaagaag
aaaaacaagatCAAaatGAAAATATATTGGACACATTAACAGGACAACCG
ATAGGGGATGATTTGTTATTGTACGCCGTACCCGTGTGTGCACCCTACAG
TTGTATGCAACCTTACAAGTACAAAGTGAAAGTGACACCAGGCACCGGAA
AACGTGGACGTGCGGCTAAATCAGCTATCCATATGTTTCTTCAGGCTAAA
GAAGCCACTGACTGGGAAAAAGATTTACTCAAAAGTTTAAAGGATGTGGA
CATATCAAGAAATATACCAGGAAAAGTCAAAATTTCTGCACCCAATATGC
AAAGGATCAAGAAGAAATAAATGCAGATAGGTGATCAACCACAAGAAAAA
CGAACGAAGAGTCCACCGCAACCAGCTCCGGTGCCTCTCAAACGTGGTCA
AAAGaaaaagttgaaaaagatgAAGGAGAAATATAAAGATCAAGACGAAG
AAGATAGACAGCTCATGAAAGAAATTCTACAATCTGGAGGATCGGAGAAA
CTTTctaaaaagaaagcaaaagcCAACGCGTCCAAGATGATGAAACAAAC
AGGCGTTACcaagcaacaacaacaaaacaaagttaaaaaacACAACCTCG
TCGCCATGGATATTTTGCACCAAGAAGAGGCCGAGATACCTTCGGGAACC
AAAAATGCTGACATTGGCaataatgaaaatgaagatgaagaagaagacaa
agaagaaaaacaagatCAAaatGAAAATATATTGGACACATTAACAGGAC
AACCGATAGGGGATGATTTGTTATTGTACGCCGTACCCGTGTGTGCACCC
TACAGTTGTATGCAACCTTACAAGTACAAAGTGAAAGTGACACCAGGCAC
CGGAAAACGTGGACGTGCGGCTAAATCAGCTATCCATATGTTTCTTCAGG
CTAAAGAAGCCACTGACTGGGAAAAAGATTTACTCAAAAGTTTAAAGGAT
GTGGACATATCAAGAAATATACCAGGAAAAGTCAAAATTTCTGCACCCAA
TATGCAAAGGATCAAGAAGAAATAAATGCAGATAGGTGATCAACCACAAG
AAAAACGAACGAAGAGTCCACCGCAACCAGCTCCGGTGCCTCTCAAACGT
GGTCAAAAGaaaaagttgaaaaagatgAAGGAGAAATATAAAGATCAAGA
CGAAGAAGATAGACAGCTCATGAAAGAAATTCTACAATCTGGAGGATCGG
AGAAACTTTctaaaaagaaagcaaaagcCAACGCGTCCAAGATGATGAAA
CAAACAGGCGTTACcaagcaacaacaacaaaacaaagttaaaaaacACAA
CCTCGTCGCCATGGATATTTTGCACCAAGAAGAGGCCGAGATACCTTCGG
GAACCAAAAATGCTGACATTGGCaataatgaaaatgaagatgaagaagaa
gacaaagaagaaaaacaagatCAAaatGAAAATATATTGGACACATTAAC
AGGACAACCGATAGGGGATGATTTGTTATTGTACGCCGTACCCGTGTGTG
CACCCTACAGTTGTATGCAACCTTACAAGTACAAAGTGAAAGTGACACCA
GGCACCGGAAAACGTGGACGTGCGGCTAAATCAGCTATCCATATGTTTCT
TCAGGCTAAAGAAGCCACTGACTGGGAAAAAGATTTACTCAAAAGTTTAA
AGGATGTGGACATATCAAGAAATATACCAGGAAAAGTCAAAATTTCTGCA
CCCAATATGCAAAGGATCAAGAAGAAATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_012622	XLOC_012622	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00022498-protein	TCONS_00022498-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000424	supercontig	sc0000424:65203..70234 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.70435	8.01815	1.23232	0.43286	11.1468	8.89781	14.244	13.444	9.49807	12.2902	11.4645	7.29398	9.49837	10.6188	9.72395	12.0238	12.4888	11.5397	6.17227	7.34386	9.33387	9.53713	16.1476	13.7907	18.9326	17.1011	3.4354	3.07543	12.3404	13.5232

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR021846	DUF3441

Blast

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BLAST of TCONS_00022498 vs. Swiss-Prot (Human)
Match: NEMF (Nuclear export mediator factor NEMF OS=Homo sapiens GN=NEMF PE=1 SV=4)

HSP 1 Score: 138.658 bits (348), Expect = 2.366e-34
Identity = 59/98 (60.20%), Postives = 82/98 (83.67%), Query Frame = 1

Query:  754 ILDTLTGQPIGDDLLLYAVPVCAPYSCMQPYKYKVKVTPGTGKRGRAAKSAIHMFLQAKEATDWEKDLLKSLKDVDISRNIPGKVKISAPNMQRIKKK 1047
            + D+LTGQP  +D+LL+A+P+CAPY+ M  YKYKVK+TPG  K+G+AAK+A++ F+ +KEAT  EKDL +S+KD D+SRNIPGKVK+SAPN+  +K+K
Sbjct:  979 LFDSLTGQPHPEDVLLFAIPICAPYTTMTNYKYKVKLTPGVQKKGKAAKTALNSFMHSKEATAREKDLFRSVKDTDLSRNIPGKVKVSAPNLLNVKRK 1076

The following BLAST results are available for this feature:

BLAST of TCONS_00022498 vs. Swiss-Prot (Human)

BLAST of TCONS_00022498 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NEMF	2.366e-34	60.20	Nuclear export mediator factor NEMF OS=Homo sapien...	[more]

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TCONS_00022498 (transcript) - C. hemisphaerica