TCONS_00022521 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022521
Unique NameTCONS_00022521
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1632

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022521 ID=TCONS_00022521|Name=TCONS_00022521|organism=Clytia hemisphaerica|type=transcript|length=1632bp
gtgacgaTTTGATAAAGAAGAAACTTAAACAATAATTCCTCATCCCCAAG
ATATTGGTTACGATGTTGAATTTGTAGAAGAAAACATCAAATTGGAGGGT
ATCACGTGTGTCATTTGCTCTTTGGTTATGAGGAGCCCGATTCAAGCACA
CAAATGTGGACACCGCTTTTGTGCAAAATGTATTGAAAAGTACCACGAAA
CAAGTGATGGTATTGTCTGTCCCTTCGACCGTCAACCGATTGAGattttc
aaaGATATCGGAAGGGAACGTGAAATTCTTGAAATGAAGGTCTACTGTAA
AAATCGTCCACAATGCAGTTGGCAATCAGAACTCCGATATTTCGAGGATC
ATATGAAGGAGTGTCTGTTCGAAACGATCGATTGTGATATGAATTGTGGT
ATCAAAGTTCTACGGTCAGATATGAGAAATCATTTGGAAAATGATTGCCT
GGTGGAATTTCCTTGTCAATATCAATCGATCGGATGTCTATTCACTggCT
CAAAAAGATCTTTAACGGAGCACATGGTCCTATCAACCAATCAACATCTC
TTGTTCCAAATGCAGCATGAAGTGAGAAAGGTCAAGCAAGATTTCGATGA
AAAATTGAAGGCTAAAGATTTGCAATTAAGGATTCTTGGTGAACGCTTGA
AGACAGTTGAAGGTGAAATTGTCGTATTGagaaatgaaaagaagaagatg
TCAGCTGAAATCAAAACCAAAAACGACAAGATGAATCAATTGGACGCAAA
GTTAATAGAATTGGAGGATCTGGTTGAGGATAACCAACTCAAAAATTATA
ACAAACTTGGGGATATGGCGAAAGCAATAGACggtttgaaagttgaaaat
caaaaagctGTAGCGAAAATAGATACCTTTTCACATccattcattttgaa
aattgataattttgacGAACAATTTAAACAAGCGAAAACCCAAAATAATA
TAATCAGATCACGACCATTCCTTTGTTTGGGCCAATACAAGGGGCAATTG
AAGCTATATTTAAATGGCAATAGTAATGGGATAGGCACTcatatatcaat
atttttttgtcttaTTGAAGGGCCTCTTGATGACATGATTGAATGGCCAA
TGAAATGGAAGAAATGCACAATTGAACTGATCATAAATGACACAGTCATA
GGGTCACATATATTGAGGGGCGTAAACGAGAATTTCAAGAACTTTAAACG
TCCGacttttgctgaaaatgaaACCGGAAAACGAGGACCATCGAAATTTG
TTGACCATAAAGATATACCCCATATCATTCGAGATGATATAGTaacgatc
aaatttgaaattcattagATGGACTGTGAACTTGGGATATTTTTCGAGTC
CCAATTATTATTGATAGAAAGTTGCTGAATTTTCTAGATTGAATTATTCT
AAACGATAGGCTTATTTCTATTGACCCGTAAAAGTCTGTTTCAAGAAAAT
TAGCGGTCCATACAGTTTTAAACAGTACTCTCGAtggaaaataaaatata
ataatttaaaCTCTGTCTATTACCGTGATATGGGTGCTATATGATAATTC
GAAATTGCTACGGGGtaatatcagtttgtataaactaaaatttatcCTAC
TTTTGCTAATTTTCTGTCTGAATGAGTCGTTG
Run BLAST on NCBI

transcript from alignment at sc0000424:223778..233080+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022521 ID=TCONS_00022521|Name=TCONS_00022521|organism=Clytia hemisphaerica|type=transcript|length=9303bp|location=Sequence derived from alignment at sc0000424:223778..233080+ (Clytia hemisphaerica)
gtgacgaTTTGATAAAGAAGAAACTTAAAGTACTATCATAATTCAACACT
TTGTGTAGATAAGATGCATTATAAGGGCAacaattctgaaaaaaataata
aagattaCTATCAGAAAGTGCGGACATGTGTGGCTATTCCTTCGACTGGA
GGACTAATTTTTACGGCGATACCCCCTACTTGGGTTGGAGAGTGTTCGCT
ATGTAACTTAGAGAGAATGAAAAAGTGCCCTTTAGAAAACcaactttata
atttttttcccaGCACCAAATCGACAATAATGGATCTTCTGTTTTTCACT
TTAGTTATAGTGTAAAAtaacaacaaacaaaaaaaaaatggcaGAATCGT
GTAATACATATTGTACTGCGGACGAACGCCCTCCagttgaaaaatctgaa
aatgtttCAGCAATAATTCCTCATCCCCAAGATATTGGTTACGATGTTGA
ATTTGTAGAAGAAAACATCAAATTGGAGGGTATCACGTGTGTCATTTGCT
CTTTGGTTATGAGGAGCCCGATTCAAGCACACAAATGTGGACACCGCTTT
TGTGCAAAATGTATTGAAAAGTACCACGAAACAAGGTATCGCCTTATTAA
TCGTCACCCTCTTTGTCTCACTAACTCCCCCTCTCTTCTCTCTCAACCCT
TCCATTGTTTCCCTTTCCTCACCTTTACCCTCTCAATCACTACATCCTTC
TTCTCCTTCCCCCTCTTCTCCACCTCTCTCTTCTCTCTCTCCTTCTCCTC
CACCTCCCTCTTCTCCAACTCCCTTTTCTCCAACTCCCTCTTCTCCACCT
TCCTCTTCTCCACCTCCCTCTTCTCAAACTCCCTCTTCTCCACCTCCCTC
TTCTCCTTCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTC
TTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCT
CTCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTCTCAAACTCCCTC
TTCTCCACCTCCCTCTTCTCCACCTCCCTCTTCTCAAACTCCCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCAAACTGCCTTTTCTCTACCT
CCCTCTTAACTCCACCTCCCTCTTCTCCACCTCCCTCTTCTCAAACTGCC
TTTTCTCTACCTCCCTCGTCTCCACCTCCCTCTTCTCAAACTCCCTCTTC
TCAAACTCCCTTTTCTCCACCTCTCTCTTCTCCTTCTCCCTCTTCTCCAC
CTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCTC
TCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTTCACCTCCCTCTTC
TCCAACTCCCTCTTATCCACCTCCCTCTTCTCCTTCTCCCTCTCCTCAAA
CTCCTCCATCTCTCTCTTCTCCACCTCCCTCTTCTCAAACTCCCTCTTCT
CCACCTTCCTCTTCTCAAACTCCCTCTTCTCCACCTCCCTCTTTTCCACC
TCCCTCTTTTCCACCTCCCTCTTTTCAAACTCCCTCTTCTCCACCTCCCT
CTTCTCCTTCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTCT
CCACCTCTCTCTTCTCCACCTCTCTCTTCTTCACCTCCCTCTTCTTCACC
TCCCTCTTCTCCACCTCCCTCTTTTCCACCTCCCTCTTTTCAAACTCCCT
CTTCTCCACCTCCCTCTTCTCCTTCTCCCTCTTCTCCACCTCCCTCTTCT
CCACCTCTCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACC
TCCCTCTTCTCCACCTCCCTCTTTTCCACCTCCCTCTTTTCAAACTCCCT
CTTCTCCACCTCCCTCTTCTCCTTCTCCCTCTTCTCCTTCTCCCTCTTCT
CCACCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACC
TCTCTCTTCTTCACCTCCCTCTTCTTCACCTCCCTCTTCTCCACCTCCCT
CTTTTCCACCTCCCTCTTTTCCACCTCCCTCTTTTCAAACTCCCTCTTCT
CCTTCTCCCTCTTCTCCTTCTCCCTCTTCTCCACTTCCCTCTTCTCCACC
ACCCTCTTCTCCAACTCTCTCTTCTCCACCTCCCTCTTCTCCACCACCCT
CTTCTCCAACTCTCTCTTCTCCACCTCCCTCTTCTCCGCCACCCTCTTCT
CCTTCTCCCTCTTTTCAAACTCCCTCTTCTCCTTTTCTCTCTTCTCCACC
TCCCTCTTCTCCACCTCTCTCTTCTCAAACTCTCTCTTCTCCACCTCTCC
TTTCTCCACAGCCTTCTTCTCCACAGCCTTTTTCTCCACCTCCCTCTTCT
CGAACTTCCTCTTCTCCTTCTCCCTCTTCTCCTTCTCCCTCTTCTCCAAT
TCCATCTTCTTAAACTTCCTCATCTCCACCACCCTTTTCTCCTTCTCCCT
CTTCTCCACATCCCTCTTCTTCACCTCTCTCTTCTCTACCTCCCTCTTCT
CCACTTTCGCTCTTCCCCAATTCCTTCTTCTCCACCTCCCTCTTCCTTGC
TCACCTTTCTATATCTATAACCACTTGCAAACAAATTTTCATCCCTTTCT
ATAATGGTGCTGTAGGTGTGATGccttctaaaattttagaatgttGATAG
CTCTGACagtcactttttttcttctcaTTTCAGTGATGGTATTGTCTGTC
CCTTCGACCGTCAACCGATTGAGGTAAAGATTctatattttgtttgtttt
tgaattaaaaaacgGATCAATTGACCTTCTTTACTTAAAATCCAATAAAT
TTCCTTCGCTCCGGACTTAATTtaataacaaaatatttctagattttcaa
aGATATCGGAAGGGAACGTGAAATTCTTGAAATGAAGGTCTACTGTAAAA
ATCGTCCACAATGCAGTTGGCAATCAGAACTCCGATATTTCGAGGTACCA
CTatcatttgtaacttttttcttctgattGATGGTAAATTTCACAGAAGT
CACCAGTAGCCTTCTAAGGATATTGTAGAAGGAATTAAAACCTCCTTAGG
GGGTTCAgaatttgttgtttttagtggttctttgatgattttgaaGGGGT
ATTTATTAGTACGTCGCTCACAATTTCTTACAGGATCATATGAAGGAGTG
TCTGTTCGAAACGATCGATTGTGATATGAATTGTGGTATCAAAGTTCTAC
GGTCAGATGTAAGGTTTTATTGTATTGATCCTGAAATCATGTACGTGTTC
TGTCTTTGGTATAGGTTTGTAGATTTCAGAGAATCATTGACCATTCCCat
agttcggaccccccccccttccctaagggggggatgacaccttccaaaaa
aagtgaagaaggggggggtcagagattttcactaaaaaggggGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTATATATAAACATTGCATGGGGAATACT
TCTGTCAACATGTATAATGTGTCAACTATTTTAATGTCAACTATATTTTA
CTGTTTCAgaccccccccctttcttaaggggggggatgacaccttccaaa
aaagttaagaagggggggtcagagattttcactaaaaaggggGGGATAGT
AAGAAGGGGGGggtcgtttaagaaggggggcttacatatattgtagatta
ttttccagcactgttatgaaatttggtctacatgaaaggaagttctttat
tttcNCAAACTCCCTCTTCTCCACCTCCCTCTTCTCCTTCTCCCTCTTCT
CCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCTCTCTTCTCCACC
TCCCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTTTCCACCTCCCT
CTTTTCAAACTCCCTCTTCTCCACCTCCCTCTTCTCCTTCTCCCTCTTCT
CCTTCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTCTCCACC
TCTCTCTTCTCCACCTCTCTCTTCTTCACCTCCCTCTTCTTCACCTCCCT
CTTCTCCACCTCCCTCTTTTCCACCTCCCTCTTTTCCACCTCCCTCTTTT
CAAACTCCCTCTTCTCCTTCTCCCTCTTCTCCTTCTCCCTCTTCTCCACC
TCCCTCTTCTCCACCACCCTCTTCTCCAACTCTCTCTTCTCCACCTCCCT
CTTCTCCGCCACCCTCTTCTCCTTCTCCCTCTTTTCAAACTCCCTCTTCT
CCTTTTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCAAAC
TCTCTCTTCTCCACCTCTCCTTTCTCCACAGCCTTCTTCTCCACAGCCTT
TTTCTCCACCTCCCTCTTCTCGAACTTCCTCTTCTCCTTCTCCCTCTTCT
CCTTCTCCCTCTTCTCCAATTCCATCTTCTTAAACTTCCTCATCTCCACC
ACCCTTTTCTCCTTCTCCCTCTTCTCCACATCCCTCTTCTTCACCTCTCT
CTTCTCTACCTCCCTCTTCTCCACTTTCGCTCTTCCCCAATTCCTTCTTC
TCCACCTCCCTCTTCCTTGCTCACCTTTCTATATCTATAACCACTTGCAA
ACAAATTTTCATCCCTTTCTATAATGGTGCTGTAGGTGTGATGccttcta
aaattttagaatgttGATAGCTCTGACagtcactttttttcttctcaTTT
CAGTGATGGTATTGTCTGTCCCTTCGACCGTCAACCGATTGAGGTAAAGA
TTctatattttgtttgtttttgaattaaaaaacgGATCAATTGACCTTCT
TTACTTAAAATCCAATAAATTTCCTTCGCTCCGGACTTAATTtaataaca
aaatatttctagattttcaaaGATATCGGAAGGGAACGTGAAATTCTTGA
AATGAAGGTCTACTGTAAAAATCGTCCACAATGCAGTTGGCAATCAGAAC
TCCGATATTTCGAGGTACCACTatcatttgtaacttttttcttctgattG
ATGGTAAATTTCACAGAAGTCACCAGTAGCCTTCTAAGGATATTGTAGAA
GGAATTAAAACCTCCTTAGGGGGTTCAgaatttgttgtttttagtggttc
tttgatgattttgaaGGGGTATTTATTAGTACGTCGCTCACAATTTCTTA
CAGGATCATATGAAGGAGTGTCTGTTCGAAACGATCGATTGTGATATGAA
TTGTGGTATCAAAGTTCTACGGTCAGATGTAAGGTTTTATTGTATTGATC
CTGAAATCATGTACGTGTTCTGTCTTTGGTATAGGTTTGTAGATTTCAGA
GAATCATTGACCATTCCCATAGTTCGGACCCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAa
gaaggggggcttacatatattgtagattattttccagcactgttatgaaa
tttggtctacatgaaaggaagttctttattttctctaaaatttggtatta
tatttgccagacttaatttttctttactgtttcccttccctttttaccat
aaaaaatttagcccgaaacccttgggggataggcatttttaaaggttgag
ggggatgccaagaaggggggatcatttaagaaggggggggataaattttg
ttttgatagaaAAAGGGAGGTACAATTTTGGGTTATTGTATGGATTTCCT
CAAGACAATAAAGCGTGGCTTTGATCTTTTAGTTTAGGATCATTTCCTTT
TTAGATGAGAAATCATTTGGAAAATGATTGCCTGGTGGAATTTCCTTGTC
AATATCAATCGATCGGATGTCTATTCACTGTAAGTTTTCTCTAGGTTTAG
AGGTCTAATTCGAGACGAAAATGGTTCCCAAACACTATTGTGTGGACACC
AATAATTTGAAACGTCACCAAGCAAGAAGTTACAAATCAAAGCAGATCAA
AACCGtttttatacacccctgtcgcacagccccggtggaacttttttcct
cagtgaggataaaaattcttatcaaaatcataaatggggatggaaattct
attgttccaaggttaaaaaacccaaTGGGGAtgtttttggagtgcaattt
ttaaacatggaatttcgagttgggatgaaatcaaggtcgatttcccagtg
gggctgaaattcaagggtattttccaaCCGGGGAGGAaattttgcttaat
tttccGGTGGGGCTGGTGTTCCAGCGGGTCTGtgcgacacaggggtgttt
ttattGGAATGGAATTGCTGCGTTCTATTGATCCGAAACGTTTAAAAAAC
CAGTATGAACACTTTCTATCCGTAACAAAAACCATACCGAAGCTATGcta
accgtaacgtctgaacatgttcttaaattgtGTGGAAAGATATTCACAtc
atgtttatttttttcagggCTCAAAAAGATCTTTAACGGAGCACATGGTC
CTATCAACCAATCAACATCTCTTGTTCCAAATGCAGCATGAAGTGAGAAA
GGTCAAGCAAGATTTCGATGAAAAATTGAAGGCTAAAGATTTGCAATTAA
GGATTCTTGGTGAACGCTTGAAGACAGTTGAAGGTGAAATTGTCGTATTG
agaaatgaaaagaagaagatgTCAGCTGAAATCAAAACCAAAAACGACAA
GATGAATCAATTGGACGCAAAGTTAATAGAATTGGAGGATCTGGTTGAGG
ATAACCAACTCAAAAATTATAACAAACTTGGGGATATGGCGAAAGCAATA
GACggtttgaaagttgaaaatcaaaaagctGTAGCGAAAATAGATACCTT
TTCACATccattcattttgaaaattgataattttgacGAACAATTTAAAC
AAGCGAAAACCCAAAATAATATAATCAGATCACGACCATTCCTTTGTTTG
GGCCAATACAAGGGGCAATTGAAGCTATATTTAAATGGCAATAGTAATGG
GATAGGCACTcatatatcaatatttttttgtcttaTTGAAGGGCCTCTTG
ATGACATGATTGAATGGCCAATGAAATGGAAGAAATGCACAATTGAACTG
ATCATAAATGACACAGTCATAGGGTCACATATATTGAGGGGCGTAAACGA
GAATTTCAAGAACTTTAAACGTCCGacttttgctgaaaatgaaACCGGAA
AACGAGGACCATCGAAATTTGTTGACCATAAAGATATACCCCATATCATT
CGAGATGATATAGTaacgatcaaatttgaaattcattagATGGACTGTGA
ACTTGGGATATTTTTCGAGTCCCAATTATTATTGATAGAAAGTTGCTGAA
TTTTCTAGATTGAATTATTCTAAACGATAGGCTTATTTCTATTGACCCGT
AAAAGTCTGTTTCAAGAAAATTAGCGGTCCATACAGTTTTAAACAGTACT
CTCGAtggaaaataaaatataataatttaaaCTCTGTCTATTACCGTGAT
ATGGGTGCTATATGATAATTCGAAATTGCTACGGGGtaatatcagtttgt
ataaactaaaatttatcCTACTTTTGCTAATTTTCTGTCTGAATGAGTCG
TTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012629XLOC_012629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022521-exon-sc0000424-1491911889:223778..223806TCONS_00022521-exon-sc0000424-1491911889:223778..223806Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1510915933:223778..223806TCONS_00022521-exon-sc0000424-1510915933:223778..223806Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1575043694:223778..223806TCONS_00022521-exon-sc0000424-1575043694:223778..223806Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1491911889:224188..224362TCONS_00022521-exon-sc0000424-1491911889:224188..224362Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1510915933:224188..224362TCONS_00022521-exon-sc0000424-1510915933:224188..224362Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1575043694:224188..224362TCONS_00022521-exon-sc0000424-1575043694:224188..224362Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1491911889:227661..227700TCONS_00022521-exon-sc0000424-1491911889:227661..227700Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1510915933:227661..227700TCONS_00022521-exon-sc0000424-1510915933:227661..227700Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1575043694:227661..227700TCONS_00022521-exon-sc0000424-1575043694:227661..227700Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1491911889:227820..227921TCONS_00022521-exon-sc0000424-1491911889:227820..227921Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1510915933:227820..227921TCONS_00022521-exon-sc0000424-1510915933:227820..227921Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1575043694:227820..227921TCONS_00022521-exon-sc0000424-1575043694:227820..227921Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1491911889:230281..230355TCONS_00022521-exon-sc0000424-1491911889:230281..230355Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1510915933:230281..230355TCONS_00022521-exon-sc0000424-1510915933:230281..230355Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1575043694:230281..230355TCONS_00022521-exon-sc0000424-1575043694:230281..230355Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1491911889:231282..231356TCONS_00022521-exon-sc0000424-1491911889:231282..231356Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1510915933:231282..231356TCONS_00022521-exon-sc0000424-1510915933:231282..231356Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1575043694:231282..231356TCONS_00022521-exon-sc0000424-1575043694:231282..231356Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1491911889:231945..233080TCONS_00022521-exon-sc0000424-1491911889:231945..233080Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1510915933:231945..233080TCONS_00022521-exon-sc0000424-1510915933:231945..233080Clytia hemisphaericaexon
TCONS_00022521-exon-sc0000424-1575043694:231945..233080TCONS_00022521-exon-sc0000424-1575043694:231945..233080Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000424supercontigsc0000424:223778..233080 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11452	1.57642	1.04856	0.899407	0.591997	0.618347	0.986839	0.838778	1.21478	1.69552	0.927299	1.17569	1.33187	2.04743	3.27641	3.89256	2.32201	2.55954	3.11902	3.33368	2.22929	1.50485	2.47293	2.34608	1.95415	2.34341	1.62757	2.58136	3.04015	2.66107
Blast
[Close]
BLAST of TCONS_00022521 vs. Swiss-Prot (Human)
Match: TRAF5 (TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.850e-26
Identity = 111/456 (24.34%), Postives = 194/456 (42.54%), Query Frame = 2 
Query:   65 VEFVEENIKLEGITCVICSLVMRSPIQAHKCGHRFCAKCIEKYHETSDGIVCPFDRQPI---EIFKDIGREREILEMKVYCKNRPQCSWQSELRYFEDHMKECLFETIDC-DMNCGIKVLRSDMRNHLENDCLV--------------------------EFP-----------------------------CQYQSIGCLFTGSKRSLTEHMVLSTNQHLLFQMQHEVRKVKQ--DFDEKLKAKDLQLRILGERLKTVEGEIVVLRNEKKKMSAEIKTKN--------------DKMNQLDAKLIELEDLVEDNQLKNYNKLGDMAKAIDGLK-----VEN--------QKAVAKIDT-----------------------FSHPFILKIDNFDEQFKQAKTQNNI-IRSRPFLCLG-QYKGQLKLYLNGNSNGIGTHISIFFCLIEGPLDDMIE 1093
            VE +EE  K     C  C  V+ +P Q   CGHRFC  CI    E +   +CP D++ I   E+FKD   +RE+L + VYC N P C+ +  L  ++DH+++CLF+ + C +  C   VLR D++ HL   C                            E+P                             C ++  GC  T  +R+L +H   +  +H+   ++  V+  +Q  D  + L+ K+ +++ L E +K +E E         K  A++  KN              DK   L+A++ +L  +V  NQ +N   L  + +A+D +K     +EN        ++   K DT                       ++   I K+ ++  + ++A   + + I S+ F      Y+   + YLNG+ +G G+H+S++F ++ G  D +++
Sbjct:   36 VERLEERYK-----CAFCHSVLHNPHQT-GCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKESKIQQLAETIKKLEKEF--------KQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV--NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQ 475
The following BLAST results are available for this feature:
BLAST of TCONS_00022521 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF51.850e-2624.34TNF receptor-associated factor 5 OS=Homo sapiens G... [more]
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