TCONS_00022525 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022525
Unique NameTCONS_00022525
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1699

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022525 ID=TCONS_00022525|Name=TCONS_00022525|organism=Clytia hemisphaerica|type=transcript|length=1699bp
CAacaattctgaaaaaaataataaagattaCTATCAGAAAGTGCGGACAT
GTGTGGCTATTCCTTCGACTGGAGGACTAATTTTTACGGCGATACCCCCT
ACTTGGGTTGGAGAGTGTTCGCTATGTAACTTAGAGAGAATGAAAAAGTG
CCCTTTAGAAAACcaactttataatttttttcccaGCACCAAATCGACAA
TAATGGATCTTCTGTTTTTCACTTTAGTTATAGTGTAAAAtaacaacaaa
caaaaaaaaaatggcaGAATCGTGTAATACATATTGTACTGCGGACGAAC
GCCCTCCagttgaaaaatctgaaaatgtttCAGCAATAATTCCTCATCCC
CAAGATATTGGTTACGATGTTGAATTTGTAGAAGAAAACATCAAATTGGA
GGGTATCACGTGTGTCATTTGCTCTTTGGTTATGAGGAGCCCGATTCAAG
CACACAAATGTGGACACCGCTTTTGTGCAAAATGTATTGAAAAGTACCAC
GAAACAAGTGATGGTATTGTCTGTCCCTTCGACCGTCAACCGATTGAGat
tttcaaaGATATCGGAAGGGAACGTGAAATTCTTGAAATGAAGGTCTACT
GTAAAAATCGTCCACAATGCAGTTGGCAATCAGAACTCCGATATTTCGAG
GATCATATGAAGGAGTGTCTGTTCGAAACGATCGATTGTGATATGAATTG
TGGTATCAAAGTTCTACGGTCAGATATGAGAAATCATTTGGAAAATGATT
GCCTGGTGGAATTTCCTTGTCAATATCAATCGATCGGATGTCTATTCACT
ggCTCAAAAAGATCTTTAACGGAGCACATGGTCCTATCAACCAATCAACA
TCTCTTGTTCCAAATGCAGCATGAAGTGAGAAAGGTCAAGCAAGATTTCG
ATGAAAAATTGAAGGCTAAAGATTTGCAATTAAGGATTCTTGGTGAACGC
TTGAAGACAGTTGAAGGTGAAATTGTCGTATTGagaaatgaaaagaagaa
gatgTCAGCTGAAATCAAAACCAAAAACGACAAGATGAATCAATTGGACG
CAAAGTTAATAGAATTGGAGGATCTGGTTGAGGATAACCAACTCAAAAAT
TATAACAAACTTGGGGATATGGCGAAAGCAATAGACgGGCCTCTTGATGA
CATGATTGAATGGCCAATGAAATGGAAGAAATGCACAATTGAACTGATCA
TAAATGACACAGTCATAGGGTCACATATATTGAGGGGCGTAAACGAGAAT
TTCAAGAACTTTAAACGTCCGacttttgctgaaaatgaaACCGGAAAACG
AGGACCATCGAAATTTGTTGACCATAAAGATATACCCCATATCATTCGAG
ATGATATAGTaacgatcaaatttgaaattcattagATGGACTGTGAACTT
GGGATATTTTTCGAGTCCCAATTATTATTGATAGAAAGTTGCTGAATTTT
CTAGATTGAATTATTCTAAACGATAGGCTTATTTCTATTGACCCGTAAAA
GTCTGTTTCAAGAAAATTAGCGGTCCATACAGTTTTAAACAGTACTCTCG
AtggaaaataaaatataataatttaaaCTCTGTCTATTACCGTGATATGG
GTGCTATATGATAATTCGAAATTGCTACGGGGtaatatcagtttgtataa
actaaaatttatcCTACTTTTGCTAATTTTCTGTCTGAATGAGTCGTTG
Run BLAST on NCBI

transcript from alignment at sc0000424:223855..233080+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022525 ID=TCONS_00022525|Name=TCONS_00022525|organism=Clytia hemisphaerica|type=transcript|length=9226bp|location=Sequence derived from alignment at sc0000424:223855..233080+ (Clytia hemisphaerica)
CAacaattctgaaaaaaataataaagattaCTATCAGAAAGTGCGGACAT
GTGTGGCTATTCCTTCGACTGGAGGACTAATTTTTACGGCGATACCCCCT
ACTTGGGTTGGAGAGTGTTCGCTATGTAACTTAGAGAGAATGAAAAAGTG
CCCTTTAGAAAACcaactttataatttttttcccaGCACCAAATCGACAA
TAATGGATCTTCTGTTTTTCACTTTAGTTATAGTGTAAAAtaacaacaaa
caaaaaaaaaatggcaGAATCGTGTAATACATATTGTACTGCGGACGAAC
GCCCTCCagttgaaaaatctgaaaatgtttCAGCAATAATTCCTCATCCC
CAAGATATTGGTTACGATGTTGAATTTGTAGAAGAAAACATCAAATTGGA
GGGTATCACGTGTGTCATTTGCTCTTTGGTTATGAGGAGCCCGATTCAAG
CACACAAATGTGGACACCGCTTTTGTGCAAAATGTATTGAAAAGTACCAC
GAAACAAGGTATCGCCTTATTAATCGTCACCCTCTTTGTCTCACTAACTC
CCCCTCTCTTCTCTCTCAACCCTTCCATTGTTTCCCTTTCCTCACCTTTA
CCCTCTCAATCACTACATCCTTCTTCTCCTTCCCCCTCTTCTCCACCTCT
CTCTTCTCTCTCTCCTTCTCCTCCACCTCCCTCTTCTCCAACTCCCTTTT
CTCCAACTCCCTCTTCTCCACCTTCCTCTTCTCCACCTCCCTCTTCTCAA
ACTCCCTCTTCTCCACCTCCCTCTTCTCCTTCTCCCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCC
CTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCA
CCTCCCTCTTCTCAAACTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCC
CTCTTCTCAAACTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTT
CTCAAACTGCCTTTTCTCTACCTCCCTCTTAACTCCACCTCCCTCTTCTC
CACCTCCCTCTTCTCAAACTGCCTTTTCTCTACCTCCCTCGTCTCCACCT
CCCTCTTCTCAAACTCCCTCTTCTCAAACTCCCTTTTCTCCACCTCTCTC
TTCTCCTTCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTCTC
CACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCTCTCTTCTCCACCT
CCCTCTTCTTCACCTCCCTCTTCTCCAACTCCCTCTTATCCACCTCCCTC
TTCTCCTTCTCCCTCTCCTCAAACTCCTCCATCTCTCTCTTCTCCACCTC
CCTCTTCTCAAACTCCCTCTTCTCCACCTTCCTCTTCTCAAACTCCCTCT
TCTCCACCTCCCTCTTTTCCACCTCCCTCTTTTCCACCTCCCTCTTTTCA
AACTCCCTCTTCTCCACCTCCCTCTTCTCCTTCTCCCTCTTCTCCACCTC
CCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCTCTCT
TCTTCACCTCCCTCTTCTTCACCTCCCTCTTCTCCACCTCCCTCTTTTCC
ACCTCCCTCTTTTCAAACTCCCTCTTCTCCACCTCCCTCTTCTCCTTCTC
CCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCTCTCT
TCTCCACCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTTTCC
ACCTCCCTCTTTTCAAACTCCCTCTTCTCCACCTCCCTCTTCTCCTTCTC
CCTCTTCTCCTTCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCT
TCTCCACCTCTCTCTTCTCCACCTCTCTCTTCTTCACCTCCCTCTTCTTC
ACCTCCCTCTTCTCCACCTCCCTCTTTTCCACCTCCCTCTTTTCCACCTC
CCTCTTTTCAAACTCCCTCTTCTCCTTCTCCCTCTTCTCCTTCTCCCTCT
TCTCCACTTCCCTCTTCTCCACCACCCTCTTCTCCAACTCTCTCTTCTCC
ACCTCCCTCTTCTCCACCACCCTCTTCTCCAACTCTCTCTTCTCCACCTC
CCTCTTCTCCGCCACCCTCTTCTCCTTCTCCCTCTTTTCAAACTCCCTCT
TCTCCTTTTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCA
AACTCTCTCTTCTCCACCTCTCCTTTCTCCACAGCCTTCTTCTCCACAGC
CTTTTTCTCCACCTCCCTCTTCTCGAACTTCCTCTTCTCCTTCTCCCTCT
TCTCCTTCTCCCTCTTCTCCAATTCCATCTTCTTAAACTTCCTCATCTCC
ACCACCCTTTTCTCCTTCTCCCTCTTCTCCACATCCCTCTTCTTCACCTC
TCTCTTCTCTACCTCCCTCTTCTCCACTTTCGCTCTTCCCCAATTCCTTC
TTCTCCACCTCCCTCTTCCTTGCTCACCTTTCTATATCTATAACCACTTG
CAAACAAATTTTCATCCCTTTCTATAATGGTGCTGTAGGTGTGATGcctt
ctaaaattttagaatgttGATAGCTCTGACagtcactttttttcttctca
TTTCAGTGATGGTATTGTCTGTCCCTTCGACCGTCAACCGATTGAGGTAA
AGATTctatattttgtttgtttttgaattaaaaaacgGATCAATTGACCT
TCTTTACTTAAAATCCAATAAATTTCCTTCGCTCCGGACTTAATTtaata
acaaaatatttctagattttcaaaGATATCGGAAGGGAACGTGAAATTCT
TGAAATGAAGGTCTACTGTAAAAATCGTCCACAATGCAGTTGGCAATCAG
AACTCCGATATTTCGAGGTACCACTatcatttgtaacttttttcttctga
ttGATGGTAAATTTCACAGAAGTCACCAGTAGCCTTCTAAGGATATTGTA
GAAGGAATTAAAACCTCCTTAGGGGGTTCAgaatttgttgtttttagtgg
ttctttgatgattttgaaGGGGTATTTATTAGTACGTCGCTCACAATTTC
TTACAGGATCATATGAAGGAGTGTCTGTTCGAAACGATCGATTGTGATAT
GAATTGTGGTATCAAAGTTCTACGGTCAGATGTAAGGTTTTATTGTATTG
ATCCTGAAATCATGTACGTGTTCTGTCTTTGGTATAGGTTTGTAGATTTC
AGAGAATCATTGACCATTCCCatagttcggaccccccccccttccctaag
ggggggatgacaccttccaaaaaaagtgaagaaggggggggtcagagatt
ttcactaaaaaggggGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAT
ATAAACATTGCATGGGGAATACTTCTGTCAACATGTATAATGTGTCAACT
ATTTTAATGTCAACTATATTTTACTGTTTCAgaccccccccctttcttaa
ggggggggatgacaccttccaaaaaagttaagaagggggggtcagagatt
ttcactaaaaaggggGGGATAGTAAGAAGGGGGGggtcgtttaagaaggg
gggcttacatatattgtagattattttccagcactgttatgaaatttggt
ctacatgaaaggaagttctttattttcNCAAACTCCCTCTTCTCCACCTC
CCTCTTCTCCTTCTCCCTCTTCTCCACCTCCCTCTTCTCCACCTCTCTCT
TCTCCACCTCTCTCTTCTCCACCTCCCTCTTCTCCACCTCCCTCTTCTCC
ACCTCCCTCTTTTCCACCTCCCTCTTTTCAAACTCCCTCTTCTCCACCTC
CCTCTTCTCCTTCTCCCTCTTCTCCTTCTCCCTCTTCTCCACCTCCCTCT
TCTCCACCTCCCTCTTCTCCACCTCTCTCTTCTCCACCTCTCTCTTCTTC
ACCTCCCTCTTCTTCACCTCCCTCTTCTCCACCTCCCTCTTTTCCACCTC
CCTCTTTTCCACCTCCCTCTTTTCAAACTCCCTCTTCTCCTTCTCCCTCT
TCTCCTTCTCCCTCTTCTCCACCTCCCTCTTCTCCACCACCCTCTTCTCC
AACTCTCTCTTCTCCACCTCCCTCTTCTCCGCCACCCTCTTCTCCTTCTC
CCTCTTTTCAAACTCCCTCTTCTCCTTTTCTCTCTTCTCCACCTCCCTCT
TCTCCACCTCTCTCTTCTCAAACTCTCTCTTCTCCACCTCTCCTTTCTCC
ACAGCCTTCTTCTCCACAGCCTTTTTCTCCACCTCCCTCTTCTCGAACTT
CCTCTTCTCCTTCTCCCTCTTCTCCTTCTCCCTCTTCTCCAATTCCATCT
TCTTAAACTTCCTCATCTCCACCACCCTTTTCTCCTTCTCCCTCTTCTCC
ACATCCCTCTTCTTCACCTCTCTCTTCTCTACCTCCCTCTTCTCCACTTT
CGCTCTTCCCCAATTCCTTCTTCTCCACCTCCCTCTTCCTTGCTCACCTT
TCTATATCTATAACCACTTGCAAACAAATTTTCATCCCTTTCTATAATGG
TGCTGTAGGTGTGATGccttctaaaattttagaatgttGATAGCTCTGAC
agtcactttttttcttctcaTTTCAGTGATGGTATTGTCTGTCCCTTCGA
CCGTCAACCGATTGAGGTAAAGATTctatattttgtttgtttttgaatta
aaaaacgGATCAATTGACCTTCTTTACTTAAAATCCAATAAATTTCCTTC
GCTCCGGACTTAATTtaataacaaaatatttctagattttcaaaGATATC
GGAAGGGAACGTGAAATTCTTGAAATGAAGGTCTACTGTAAAAATCGTCC
ACAATGCAGTTGGCAATCAGAACTCCGATATTTCGAGGTACCACTatcat
ttgtaacttttttcttctgattGATGGTAAATTTCACAGAAGTCACCAGT
AGCCTTCTAAGGATATTGTAGAAGGAATTAAAACCTCCTTAGGGGGTTCA
gaatttgttgtttttagtggttctttgatgattttgaaGGGGTATTTATT
AGTACGTCGCTCACAATTTCTTACAGGATCATATGAAGGAGTGTCTGTTC
GAAACGATCGATTGTGATATGAATTGTGGTATCAAAGTTCTACGGTCAGA
TGTAAGGTTTTATTGTATTGATCCTGAAATCATGTACGTGTTCTGTCTTT
GGTATAGGTTTGTAGATTTCAGAGAATCATTGACCATTCCCATAGTTCGG
ACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTAAagaaggggggcttacatatattgtagat
tattttccagcactgttatgaaatttggtctacatgaaaggaagttcttt
attttctctaaaatttggtattatatttgccagacttaatttttctttac
tgtttcccttccctttttaccataaaaaatttagcccgaaacccttgggg
gataggcatttttaaaggttgagggggatgccaagaaggggggatcattt
aagaaggggggggataaattttgttttgatagaaAAAGGGAGGTACAATT
TTGGGTTATTGTATGGATTTCCTCAAGACAATAAAGCGTGGCTTTGATCT
TTTAGTTTAGGATCATTTCCTTTTTAGATGAGAAATCATTTGGAAAATGA
TTGCCTGGTGGAATTTCCTTGTCAATATCAATCGATCGGATGTCTATTCA
CTGTAAGTTTTCTCTAGGTTTAGAGGTCTAATTCGAGACGAAAATGGTTC
CCAAACACTATTGTGTGGACACCAATAATTTGAAACGTCACCAAGCAAGA
AGTTACAAATCAAAGCAGATCAAAACCGtttttatacacccctgtcgcac
agccccggtggaacttttttcctcagtgaggataaaaattcttatcaaaa
tcataaatggggatggaaattctattgttccaaggttaaaaaacccaaTG
GGGAtgtttttggagtgcaatttttaaacatggaatttcgagttgggatg
aaatcaaggtcgatttcccagtggggctgaaattcaagggtattttccaa
CCGGGGAGGAaattttgcttaattttccGGTGGGGCTGGTGTTCCAGCGG
GTCTGtgcgacacaggggtgtttttattGGAATGGAATTGCTGCGTTCTA
TTGATCCGAAACGTTTAAAAAACCAGTATGAACACTTTCTATCCGTAACA
AAAACCATACCGAAGCTATGctaaccgtaacgtctgaacatgttcttaaa
ttgtGTGGAAAGATATTCACAtcatgtttatttttttcagggCTCAAAAA
GATCTTTAACGGAGCACATGGTCCTATCAACCAATCAACATCTCTTGTTC
CAAATGCAGCATGAAGTGAGAAAGGTCAAGCAAGATTTCGATGAAAAATT
GAAGGCTAAAGATTTGCAATTAAGGATTCTTGGTGAACGCTTGAAGACAG
TTGAAGGTGAAATTGTCGTATTGagaaatgaaaagaagaagatgTCAGCT
GAAATCAAAACCAAAAACGACAAGATGAATCAATTGGACGCAAAGTTAAT
AGAATTGGAGGATCTGGTTGAGGATAACCAACTCAAAAATTATAACAAAC
TTGGGGATATGGCGAAAGCAATAGACggtttgaaagttgaaaatcaaaaa
gctGTAGCGAAAATAGATACCTTTTCACATccattcattttgaaaattga
taattttgacGAACAATTTAAACAAGCGAAAACCCAAAATAATATAATCA
GATCACGACCATTCCTTTGTTTGGGCCAATACAAGGGGCAATTGAAGCTA
TATTTAAATGGCAATAGTAATGGGATAGGCACTcatatatcaatattttt
ttgtcttaTTGAAGGGCCTCTTGATGACATGATTGAATGGCCAATGAAAT
GGAAGAAATGCACAATTGAACTGATCATAAATGACACAGTCATAGGGTCA
CATATATTGAGGGGCGTAAACGAGAATTTCAAGAACTTTAAACGTCCGac
ttttgctgaaaatgaaACCGGAAAACGAGGACCATCGAAATTTGTTGACC
ATAAAGATATACCCCATATCATTCGAGATGATATAGTaacgatcaaattt
gaaattcattagATGGACTGTGAACTTGGGATATTTTTCGAGTCCCAATT
ATTATTGATAGAAAGTTGCTGAATTTTCTAGATTGAATTATTCTAAACGA
TAGGCTTATTTCTATTGACCCGTAAAAGTCTGTTTCAAGAAAATTAGCGG
TCCATACAGTTTTAAACAGTACTCTCGAtggaaaataaaatataataatt
taaaCTCTGTCTATTACCGTGATATGGGTGCTATATGATAATTCGAAATT
GCTACGGGGtaatatcagtttgtataaactaaaatttatcCTACTTTTGC
TAATTTTCTGTCTGAATGAGTCGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012629XLOC_012629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022525-exon-sc0000424-1491911889:223855..224362TCONS_00022525-exon-sc0000424-1491911889:223855..224362Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1510915933:223855..224362TCONS_00022525-exon-sc0000424-1510915933:223855..224362Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1575043694:223855..224362TCONS_00022525-exon-sc0000424-1575043694:223855..224362Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1491911889:227661..227700TCONS_00022525-exon-sc0000424-1491911889:227661..227700Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1510915933:227661..227700TCONS_00022525-exon-sc0000424-1510915933:227661..227700Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1575043694:227661..227700TCONS_00022525-exon-sc0000424-1575043694:227661..227700Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1491911889:227820..227921TCONS_00022525-exon-sc0000424-1491911889:227820..227921Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1510915933:227820..227921TCONS_00022525-exon-sc0000424-1510915933:227820..227921Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1575043694:227820..227921TCONS_00022525-exon-sc0000424-1575043694:227820..227921Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1491911889:228111..228185TCONS_00022525-exon-sc0000424-1491911889:228111..228185Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1510915933:228111..228185TCONS_00022525-exon-sc0000424-1510915933:228111..228185Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1575043694:228111..228185TCONS_00022525-exon-sc0000424-1575043694:228111..228185Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1491911889:231282..231356TCONS_00022525-exon-sc0000424-1491911889:231282..231356Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1510915933:231282..231356TCONS_00022525-exon-sc0000424-1510915933:231282..231356Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1575043694:231282..231356TCONS_00022525-exon-sc0000424-1575043694:231282..231356Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1491911889:231945..232281TCONS_00022525-exon-sc0000424-1491911889:231945..232281Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1510915933:231945..232281TCONS_00022525-exon-sc0000424-1510915933:231945..232281Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1575043694:231945..232281TCONS_00022525-exon-sc0000424-1575043694:231945..232281Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1491911889:232519..233080TCONS_00022525-exon-sc0000424-1491911889:232519..233080Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1510915933:232519..233080TCONS_00022525-exon-sc0000424-1510915933:232519..233080Clytia hemisphaericaexon
TCONS_00022525-exon-sc0000424-1575043694:232519..233080TCONS_00022525-exon-sc0000424-1575043694:232519..233080Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000424supercontigsc0000424:223855..233080 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0614507	1.42074	1.27896	1.04336	0	0.167287	0	0.691966	1.44153	0.467665	0.318086	0.118274	3.44747e-05	0.0115124	3.13571e-10	2.27001	7.36938e-05	0.923685	0.269812	1.08421	0.588915	0	1.37776	0.682996	2.35961	1.43918	2.20959	2.50976	2.15685	0.600263
Blast
[Close]
BLAST of TCONS_00022525 vs. Swiss-Prot (Human)
Match: TRAF5 (TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.576e-21
Identity = 87/331 (26.28%), Postives = 142/331 (42.90%), Query Frame = 3 
Query:  369 VEFVEENIKLEGITCVICSLVMRSPIQAHKCGHRFCAKCIEKYHETSDGIVCPFDRQPI---EIFKDIGREREILEMKVYCKNRPQCSWQSELRYFEDHMKECLFETIDC-DMNCGIKVLRSDMRNHLENDCLV--------------------------EFP-----------------------------CQYQSIGCLFTGSKRSLTEHMVLSTNQHLLFQMQHEVRKVKQ--DFDEKLKAKDLQLRILGERLKTVEGEIVVLRNEKKKMSAEIKTKN--------------DKMNQLDAKLIELEDLVEDNQLKNYNKLGDMAKAID 1136
            VE +EE  K     C  C  V+ +P Q   CGHRFC  CI    E +   +CP D++ I   E+FKD   +RE+L + VYC N P C+ +  L  ++DH+++CLF+ + C +  C   VLR D++ HL   C                            E+P                             C ++  GC  T  +R+L +H   +  +H+   ++  V+  +Q  D  + L+ K+ +++ L E +K +E E         K  A++  KN              DK   L+A++ +L  +V  NQ +N   L  + +A+D
Sbjct:   36 VERLEERYK-----CAFCHSVLHNPHQT-GCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKESKIQQLAETIKKLEKEF--------KQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV--NQQQNKFDLRPLMEAVD 350
The following BLAST results are available for this feature:
BLAST of TCONS_00022525 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF51.576e-2126.28TNF receptor-associated factor 5 OS=Homo sapiens G... [more]
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