TCONS_00022535 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022535
Unique NameTCONS_00022535
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1238

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022535 ID=TCONS_00022535|Name=TCONS_00022535|organism=Clytia hemisphaerica|type=transcript|length=1238bp
ttcagagaaaaaaatataatagaaaaatcaaaataaataaaaaaatggag
ATTAAAGAAGCCTGTTTATCCTACTCCATCGTCAGCCTGGTGTATCAAAT
TACTATCATTACCATTATGTATTTGTGTAACATCTCACCAATTAGTTCGA
AAAGTATTACAACTTTTCTCATGGTTTTTATACCCCTGTCAATGATAGGA
TGTTATGTTTTGATCAAGTTGCTTCACTCCAAAGTTTCAAGtatcaagaa
aagaaaagacaGCTTTTCAGAGGTGATGTTGTTGGTATTTACATTGGCGT
CATTTCTTGCTGGTTCAGTCCTGTTTCACGTGGTATCGATACTACTTGGA
GCTCCTCTTATTGAAAATGTAGATGAaacgttttcattttcaatgttGTG
TTCTGCATTGACCGTTGTTCCATTGTTTATCACTCATGATGGACGTTGGG
ATGATTTCCTGAGCTATCTTCCTGAAACTACaTATGTACAGGATTCATTA
TCAGACTGTATCAAAATGGTGTCAGCATTTACAGTGATAGGGGCATGGGC
AGGAGCTTTCCCAATACCTTTGGACTGGGATCGAGATTGGCAGACTTGGC
CGATAACTTGTTGTATTGGGGCGCTATCGGGACAAATAGTGGGATTATGT
TTTTCCATTTTGTCATGTGTGGGTGTTATACCAAGTAGCCCGCCGAACTG
GAAAAATAAGATCACTTAAAAGTTGGTAATCGTTGCATTCCTAGAAGCTG
ATGATGCCAGTTCCGTACCATCATCATATTTTCCTGGTGCGTCTAAAGAA
TTCTTAGAGATAGACAGTAAATTCACTGCCACATATTTCGGCACCAAACC
CAATCTAGATATCTGTAAAACACGTCAATCAGCACCACACGAATCATATA
AAGTCTATGATAATACTCTTAAAGGAACCTACATATTACGTAGAACATTA
CAAAGGGATTATCTTGGTGTTAATGTCCATGACTATGAAATGGATCTAGA
GGAACTTTACAAGGTTGATGATGTGGCTGTTTTCACACGTGGTTTACGAG
ATATGaccaaaagtaaaaataatgtCCCCATGCTGTTCAGTCAACCACAT
TACTTAATGGCAGAGAGTATCATTTCGGACACCCTTGGAATGAAGCCGGA
CAAAATTAAACATCAAAGCCTGCATTCAATAGAACCGATCACTGGGTCAG
CAATCGAAGTTGTCAACCGTTTACAACTCAATACATAT
Run BLAST on NCBI

protein sequence of TCONS_00022535-protein

>TCONS_00022535-protein ID=TCONS_00022535-protein|Name=TCONS_00022535-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
QRKKYNRKIKINKKMEIKEACLSYSIVSLVYQITIITIMYLCNISPISSK
SITTFLMVFIPLSMIGCYVLIKLLHSKVSSIKKRKDSFSEVMLLVFTLAS
FLAGSVLFHVVSILLGAPLIENVDETFSFSMLCSALTVVPLFITHDGRWD
DFLSYLPETTYVQDSLSDCIKMVSAFTVIGAWAGAFPIPLDWDRDWQTWP
ITCCIGALSGQIVGLCFSILSCVGVIPSSPPNWKNKIT
Run BLAST on NCBI

transcript from alignment at sc0000424:1..17832-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022535 ID=TCONS_00022535|Name=TCONS_00022535|organism=Clytia hemisphaerica|type=transcript|length=17832bp|location=Sequence derived from alignment at sc0000424:1..17832- (Clytia hemisphaerica)
TTCAGAGAAAAAAATATAATAGAAAAATCAAAATAAATAAAAAAATGGAG
ATTAAAGAAGCCTGTTTATCCTACTCCATCGTCAGCCTGGTGTATCAAAT
TACTATCATTACCATTATGTATTTGTGTAACATCTCACCAATTAGTTCGA
AAAGTATTACAACTTTTCTCATGGTTTTTATACCCCTGTCAATGATAGGA
TGTTATGTTTTGATCAAGTTGCTTCACTCCAAAGTTTCAAGTATCAAGAA
AAGAAAAGACAGCTTTTCAGAGGTAAATTTTTGTATGTGTTTTAAATACC
CAAATACCCAAAGGTTCCTTTTCCAATAGCCATTTGACCATTCTTTTTTC
CTTGATTTCTCCACTTTTCCTGATTCTTCTGAGTATTATATATGTTTTAA
CAGGTAGTTATGATTTTTCAAATCGAGTGTTGCAATATACTGATTCTTCC
GGGTGATGGTTTCTTTTCTGTGACCGCAGTCGGAGCCGACCCAAAGGTTC
CTTTTTCGATAGCCATCTGACCATTCATTTTCCCCTTTTTTGATTCTTCT
CTCAATTGCTGAGCACCAGGAAGAGAGGTATCTAATCAAGTACCATTTTT
ACTAAGTACCGTTTTGTGTTAAATCTTTGAGATACTGGCACTATGTTTGT
CTTATTGAATCTTAGAAATACAAATTCGTTACGATATCAAGAAATTAGTC
CCATAATTGTTCATTAAAGCTGGGTGTCCACTGGAAAAAACAAGTTCATG
GCGAATTTGTTTGTCGCAAAAAAAAAATCTAGACAGATGTCTGGAATTAA
AAACCTATTGTTTTATTTGCGATAGGGTGAAAAAAAATTAGTGATGAAAA
ATGAGTGATGAAAAATGAAAACGTTTTCATTGTAAATCGTTTATTATTTT
TTAACTTCATCTTAAAAAAGAACAATAGGTTTTTAATTCCAAACATACGT
CTGGATTTATTTTTTGCGACAGGTATTTGCGACGAACTTTTTTTTTCAGT
GGACACCCAGCTTTATGTATTAGCCAAATACTGGAGCCGCTCGCTGCGCT
GCTGTGCGCAGCTTGTATGGACAAAAACTACTTTCGCTTTCGTTTTTAGG
CGGCATTCACAGATATTTGGTCAGAAAACAGTGAGACTCCCCCTTCTTTT
TACCAGCAAAAAATAGGAAAATAAGATTGGATTTATGTTGGAACTTAAAT
GGGATTTAAAGAAAAAGCCTCTTCCAAACATGAAACGTTTATAATCACTC
ATAGTTTGGGGGAATTTTCAATTATCCAGGCCTCAGTCTTTAGCCTATAG
CCTATGAACTTTTTGTACTGTATATGCTTTATTCGGGCTATTACTTTTCG
TAAACAGACTTTTTCTGTTCACTTTGGGCCTCAGCTGATGAGTATGATAG
GTAGATTGGGTTGGGAAATAGGTAAAAAGTNGACTACAAAGTGGATTTGT
ACTGTCAAGGGCTCTAACTTGGGACAGTCTGACAAAACATGGGACAGCAA
TTCGGCAATCATTTTACCGAACCTCCAAACTCATTATAATTAACATAGTC
GCACATCATAGAAAACAAACTTCTTGTCAACAGAGATTGTCGACAGTGAA
AATACAGTCCAGAAAGTCAACCATCCCATGATATGACCACTCGTACCAAG
TTAGAGCCGTTGACGGTATGCCGGATATCCAAAACAATAACAATCCATTA
TATGATATACACAGTCATGTCAATGTCGTAATCAATTTTTTGCGGTACCT
CAAAAATTTCAGAATTTTTGGGCACTTTCTTCGGATTCGCTTATCATTTT
CTTTTCCTGGATCCAATCCAAACCTGCACGTAAAATGTGCCCCAAAATCA
GTCACTTTTATAACATTATAACTCGGTCTTTGACGACTGGGAAGATTCGA
CGACAACGATGGTGTCTTTTCAGCCATTTTTGAGATGAATAAAATTAATC
ATGAAATTTTTGTTATCTTAAGGGATGGGTGAAACCATCATGTTTGAACT
ATGAGCCTATACCTTGGATATCTCTCTCATATCAAACTGTTCAATGCGAC
CGAAAAAATCTTTCCCAGCTGAATTCCATGATAGGGAATGTTTGTGAAGC
TAATAGTTATTGTTTGCACCAATATAAAGTTACTTCTGCAAGTTAGTAGT
CTCCATCAACAGCTTTTGAAAGCAGCAAAATCGACAAAACTACTTGAGTG
AAGTTTGTAAACAAAAAAGCAAGTTTCACACATTCATTATGTTCAAAAAG
TATTGTCTGTTATTCCAATGTATGATAGAAGTCTATTCCAATACATTTGA
TGTTGGTTCCAAGCAGTATTCTTCTTCTTTCTTACCAAGAATCACCAAAT
CTACTCAAAAAGCACTGTTTTGCAGTGCTTCCCCAGCCTAAAATGTAAAC
AAAATGGCTTCCGCCTCGATTTTTGTCCCGACACGCGCATCAACTGCAGC
GCAGCGAGCGGCTCCAGAATTTGGCTAATAGTCTATACCGGGATAGAAGG
GACTTTCCTACTTCATGACCTCTGTTCCTCGTTTTTGATTGGTTTATGAA
AAAAAAATATTAGGAATTTGAATTGGTTTAAAATCAGTCACGGGTATGAA
AAATCATTTGAAATGCTTCCAGATCCACTTAAAATGGTTCTCCACTAGGA
GGACGTTGATATTTTTCCTCAGCAAAGAGTTTGTTATCTTTTTTACAGGT
GATGTTGTTGGTATTTACATTGGCGTCATTTCTTGCTGGTTCAGTCCTGT
TTCACGTGGTATCGATACTACTTGGAGCTCCTCTTATTGAGTAAGTTTAA
TGAATGAATAACCACCCATAAAAAATCTTTGGGTTAGCGAGAGGGTTAGC
CAAAAGAAGACAAAGAAAGGGTTCCAATCATATCCTTTTTGTAGATACGC
GTTATTACGCGACCTTGTAGTAGACCATTTCATTGCGATTTTTTGGAAAA
ACAAACTACCTAGTGACCACATACGTGGACAAAACTCTTTGTGAGAACTG
AGCTTCTGATATGAAAATTTCGGTAAAAATTACTTGGAAACAAAGCTGCT
TCGTTATTAACTCTAGAATTTAGATTAAGGGCCATTACAGAGGAATAGAA
GGGGAACGTTACGTGGCGCTCATAATTTGACTGGATACAGGGTGTAAAAA
CTTATGCGACCCATGTTTCATTTGATAGCACCCAAAGAGGGGGTTCAATC
GTGGTCGACTTTCTCTTGGAATGACCCTTAACTATGATTATAATATCTCT
TTTCTTTGCTTCTCCAGAAATGTAGATGAAACGTTTTCATTTTCAATGTT
GTGTTCTGCATTGACCGTTGTTCCATTGTTTATCACTCATGATGGACGTT
GGGATGATTTCCTGAGCTATCTTCCTGAAACTACGTAAGTTTGTAGAGAG
AAGGTTCCGAATGTGTGGTATTCATGAATGCGGGTAATTTTCTATAGTAG
AAGAAAAGCCAAATACTGTGACACCGGGCAGTACAAGCCTCCCGGACGCC
TCCCCGTTTCAAAAAATTAAAAGATTTGTGCCTTAGGTGGTATCTTATTA
AGGAGCGATCTTTCTCATTTGATTCCAGTAGATCCTGAGTTCCAGCAGGT
AGTGAACTTGTATTTTACAGACCGGCCTGCAAATTTCAAGGCTAACACTT
TTGAATATTAAGATTTTGAGGGGGGGGGGCTCCCAAGATGCTGCCCCTAG
CAAAAAAATAGGTAAATGTTTGAAGGGTAAAGGTTAGAAATGTCAGTATA
CTGAAGAGGGGCTTCGATTTATGTAACCTTTGAGTCGGAATTATTTGTAA
ACGTTGAATATGTTTTTCAGACTTTATAAGGTGGTAATTATGTCACTAAA
TGGACGTCCTAGCCTTAAGGGCTCTGGACATTTTTGCTTTTACACCAACT
TACATGGCAATTTCTGCATTTTAAAAAGATTAATATATATCTTTTTTTAT
ATGTCCTGTTAAACATACCTTTTTAGAATTTAAAAATTGAAAAATTGAAA
TGAAAAAATTAAATGAAGAAGAAAACGAAGAGTTTTTCGAAGAAGAGTGT
TTCACCTTTCAAAGCCCTAATCTTGGTAAAAATCAAACATTTTGGAATTT
TTTTTGGTTCAGGTGATGGGCCAAATTGAAAAGTCCCGTTCCTGTCACGG
AAGGAAATCAGAGCCTTTTTTGGTCTTTTTTTGAAAAATGGTAAAATGAA
TGAAAATAGTATTAGTCCTGAATTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAGAACCGACAAATTTTCACTAAAATAGCTTAAAAACGCTTAAAAAGC
TCTATTTAAGCGTTTTTAAGGCTTTTTTAAGCAAAAAACGTAAAAACACA
ACCTTTAAAGCAAGTGAGCTACTTCCAAAGGCTCTAATTAGCATATTTCC
CTGGTGCTGAAGCGATTTTGAGCGTTTAGAACCCGCTGGGAACAGTAGTT
TTGCCAGAAAACAGGTTTTTAGGCCTCCAGAGCCGCCTGGGCCTACACTG
TAAGCTTACAGCGCTGTACTGGAGCCTTAGTTAAGCTTATTCTGAGCTCC
TTACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAATTGGAAAATTTAAGGGTTATTTA
AATAAAAAATCACAGTTACTTATTTTGTTTGTAAGATTTTTGATTTTGTG
TTTTGGTTGACGACTTTTCAATTTGGCCCTGATATATCTATTTAGTATCG
AAAAATACAATTTCGGAAAGTTTTTGTGGAAGTATCTTTCCTTTAAAATC
TCCAAAAACCTCATTTTTGGCAATTTTCTCCACTAAATTTTTCCATTCGA
AAACAGCTACAACTTAGGATGTTGCCAAATTGAAAATTTTTCCGAAAAAA
TTTAAATAAAGAAATTATTTGTCATGAACTTAAAAAAAGTTTGAAACAGT
AAAATGATTTCCCCAAGGAGGTTAGACTTTTTTTATGAAAAGTATATGAA
TAGCGTCGTTATGACGTTTTATTAAGGTCCATGCCACATTTATTCCTTAA
TTACTCATGATGTAATTACTTAAATTCATTTTTTCAAAAGCAAAAACATA
AGGTTTTATCTTCAAATTCTGAAATTGATTTTTCACTACGTCCAGAGCCC
TTAAATGCTAAAACATCACAACTTCGAGATGTGTAATCTTACGTAGGATA
TTATTTTCACCTTTCACCAAAAATATTATTTTCACTTTTTTTCTTAAATC
AGATATGTACAGGATTCATTATCAGACTGTATCAAAATGGTGTCAGCATT
TACAGTGATAGGGGCATGGGCAGGAGCTTTCCCAATACCTTTGGACTGGG
ATCGAGATTGGCAGGTCAGTATAAAAATACACTTTTTTTATAAGAACCAG
TATAATTTTGCTGATGCTCGGCTGTTCTTGAGGTATTTTAGGCGTTTTAC
CCAATTTTTACTACTTTGACCCCTATACTGCTTTAAATTGAGAAATTTCA
GGCTCAGCATTGCTCTTAAATTGTTCTTATTTTTTGGCGATTTTGAGCCT
CGTTGTTCTTATAAAATTGTTCTTATAAAAAAGTGTAACTTTTAAGATTC
CAAATAGAAGTAATAAGTAGAGGGAAACACGAGAAGCGAAGGTTTGGATT
CTTCCGTGAAGCGTTTGTAATAAATTGATTTTCAACAGGGAATTTATATT
TTTCTTGAGAAATACTACTTATTTATTGTACTAGAAGGTCTCATGTTTAG
TTTAATAATAAACATCTCTTGAAAATGTAGTCTTATTATTATTGCGAGAG
TTGGTCCTGTGAAGCTCTCACAACAGGAGAGACTGTGTATAGAACGTGAT
GAAAAGTAAAAAAAGAACAATCCAAAATAGCGAAAAAGAAAACTCCGGCG
GTCCTTCTATCACTCTAAAGAGATGAAGAATGAAATTGCTAATACGATAA
CAATTAATAATATATTTTTTTAATCTTTTTTCTCTTGATAATAATAAATT
TAAATTTGGGACAAAATTTTGATATGATATGGGTTTTTAATTTGACATTA
TTTTTGCAATATTTTTCTTTTCGTCTCTTTTTTTTACAGACTTGGCCGAT
AACTTGTTGTATTGGGGCGCTATCGGGACAAATAGTGGGATTATGTTTTT
CCATTTTGTCATGTGTGGGTGTTATACCAAGTAGCCCGCCGAACTGGAAA
AATAAGATCACTTAAAAGTTGGTAATCGTTGCATTCCTAGGTACCTTACT
TTTACTCATATTTATTGATTTTTTTTTTTTTTTGGTAAGAACATCATCTA
CTTCAATTTTTTTGTTTCGCTTATTTTGGTTAATTCCCTAAGAAAAACCT
GTTTGGTATGGTAACTTTTCTTCTGTGTGAGCTGCATGTTTTTTCTAAAG
ATGGTAGCCTATTTTTTTCGACTCGTAAAAGCTAAATTTGTTTTTTTGTG
CGATGTTTTGCCTTTAAGATTATCCGTTAATTTCGGAAAAACACTTGGGA
TTTTCAATGATTGTAGTAAGGACTTGTATGTAGTTTTAGTTGCTTCTTTA
AAATAACTTACTGCACGATTTAACGTCCGTGGTTACCAGCAGCTGGGGTT
GGGGACGCCTTCCTCTGATGATCTTACGTCAGGCTGCCCGATCGTTAGTC
ATGTCTTGGGAAATAAGGGAAATCCAACTCTTAGGGTGTCCAGTTTTTTG
ACGATAGGAAACTAAATTGATGTTTTCTTTCTGCATTCGACAAAAGAACA
GAAAACAACATGGTGGATTAGTAATCAAATACAAACATAAACCAAAAAAT
CCAAATTAGTGAGACAACATGGTAATATTCAAGAAGGGATTTAAAAAGCC
TACAAAGTCTAGATTCTAAATGAGTCTCACAGTTTGAAGTTTTCTCTTTT
GTTCCCCCTAAAAAATGTTCTTTTAGCATTTAATGATGTTTTCCTATTTT
CATATCTTCGCTTTACATACCCCTTTCCTCTTTCATGAGATTTAATTCTT
AAAGCGACAGAGAGTGAATTTTACAATAGAATCTAGTGATAAAAATGACC
CTATTTTGAGAATTTGCTTTTTGTTTTATTAAAAGTAAAGGTATGATGAT
AAAAAGTAGGGAAAAAATCGGTCTTATTTCGTATCACCATTGTTTCAATG
ATGCATTGTGGGATTTCTACTAAACGTTGATGCAGCGCAGGTGACTTTTG
TTGTTGAAACTCTTAAGAGTGAAGTGAGAAAATATTAAATTGGTACCTTC
CATGTATGGTTAAGTTTTCTAACTAAAGTTGTTTTTGATTATAGTGATTA
TTATAATAGAGAAACGTTTTAACTTTTTTTTTTGTATAAGAACTTTGATG
CTTCGATGCCGAAAATCCGAGGAGATTGTAAGGCTTTGTTTTGACCCCAA
AACAGGTCATTTTTATTGGAATTTTACATTTTGAAAATACAAAAAATGAA
GAAAATATTAAGCTTCAAGGGTTTTCGAAGTTCTTATAAAAAACGCGTAA
AATAACAATGTAGCAAAAATATCATTTATAAAATGCAAAAGAGGCGAAAA
TACATCAACAATTTACAAAAAAATAGAACGGGTTGAAAAAAGCACGGGTT
GAAAAAAGCAAAATTTAGCAGTACAATAGAGAAAGAAAGAAAAAATCTAC
AAAATCAGCTGCGCTGCCATTTTTGACTAAAGAACTGTGCTTTTGTTTTG
TAATCTTTTTCAATCATTGTCTTGGCAACAGTCCCAAATCAACAAATAAC
TAAGACCGTTCTCCAAAAAAGGTAGCATTGTTTTTAGTATCCAAGTATCA
AATCTAAAAGAAAACTTTGACGCAGGGTATCGCCTCACACTGGACGATAG
AAGTATCAGAATCTAAAATCATTTTTCATAGATTATTCGCGTTGCGGTCC
CTGTGTGTTATCGCGACTATTGAAAGCGCTTCCTTTTTGTAGATCTTGCT
GATAGTCAAACTTTATCTTCAAACTTGAAATACTGTAGAGAAAAAAGGTT
GTTTAGTTTCCTGTGAGTTGGATTAATTTTATTTCGTCTTGAGAATTTAT
GTGGGAGACATTTTTAGGTAGAAAGCGAATTCCTACCCTGATCAAGTACA
ACAAGAAGTTAAAAGAACATCAAACAGGAAAAAAATATAATTGTTGTAAT
TATTGGACTGGTCGACATGGGTCAGTTCAAAGTTATTGCATTGATATTGC
TTGGAGCCATTTCAATCATTCTTGGTGTTCTATTGGGAAGAAATTTGATA
CCGCGAGTGATACGGAAAACCCTTACGGAAATGAAATGCGTCGATTCAAT
TATGCATGCACAGTACAAACAGTTTGTAAGTCAAACATTTTTCCTTTTCT
TTTCAGTTATTCCTCCCGTATTATGACTTTTCCATGTGTACGCAAATTTT
GGGTCAAACCTAAATTCCCCTGGACTACAAGGGACAAGCTGTAGTTTTTA
CAAGCTCTTATTTAATTTGGTTGGTCGTTAAGATGTAATAAAAGAATCTT
ATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTAAATGACCAATT
AGTGAAGTATCTTGTAAAAACCAGTTGTATTGAAGTTTTTACAAGATGCT
CACATAATTGGTTATTCAAAACAATAGAGATGACGCGTTATGTTAAAAAA
ATATAATAAAAGTTTTTGTTTGAATAGTTAACGACCAATCCAATGACAAA
AATTCTTGTAAATGTTCAACTCCAGCTCATCCCAGCAATACCAGAGAGTA
TGTTTCCGTACGTTTCCGTACATTCCCTTTTCGTTCTCCCTGTTTTGAAC
ATTTCAAATCTAAAGTTTGATTTTTTTTCTTTATCAAATTAACAAAATGA
CTTAGACGAAATATTATTTTGGGGAATTTAGATAAGATTCCAAGATAATT
TCTGTTAATTTATTGAATTAGAATTTAAATTTTCACTTACTTAGTGATCA
TGTTTTTTATAAGAACAAACTCCATAAGAACCTAGCCTGGGAATCCGAGC
TCATAATCTTAAAAAAAACAAAAAATACCTCACCTCACAAAGTTTAAAAT
TATAGAGCTTGGTGCAGGTAGATTAGTCTGACACAGAATGTTATAAACAG
TCTGTGTATGAACCCTTGTTGACAGACTTTCTGAACTTTGGAAACCCAGG
CAAACACTCATAATCAACTTACCATAAAAGCTCTTTCAAAAGCTCTAAAG
ACTTTCAAAACTACTAAAAACCACATCAAAACATTAGCCACATGTATTTA
GATACCCAGCCAACAGCCATTTTGTTTCTAAACTGAATCTATGTTTTCAT
TTTCATTTGTTTTCCTTTTTTCTGCAGAGTCAGCTTTTCCCATAAATTAT
GCGCACGCATCGAAATTATCAAAATGCGCGCGAAAGTACTGCTAAGTAAT
ACGCCGAAAGCTGGCCAGTCAGGCCGAACCTGCATTGCAGGGAAAAATCT
CCCTGCCAGGCGAGTTACCTGCGCCAAGCGTTAAACCAGCAGCAAAAATA
TCATAAACTAGACTGTGAAAAAAGTTTAACGCTTGGATTCCCAGGCTACA
TAAGAACATAAGGTTTCGATGGCCAAAATGTTAATAACCAGTTAAGGCAA
GTTAAGGGACTGTAACATACCCGATTTCTTTGAAAAATGAGCAGAAATAC
TCACAAAATTGGGAACATAAGAACATGTTAAGAACATTTTTACGCTTAAA
ACTCAAAAAGAACATCCCAAGGCTTCAAAAATTCTAGATGTTCTTATGAA
GAACAAAAATCGTAGACAGACAGTCGGTCGAGATATGCAGTCAATACTCT
CTAATTCAAATCTCTATTAATCGAATCTTTCTGCAATTCGAACTAAAACA
TTGATCCCTTCAGCTGAAAAGTGGTTTAAATTACTCTCTGTAATTCGAAT
CTTTCTCTAATTCGAAACAAAATCTTTGGTCCTTTGAAGATCGAATTAGA
GAGAGATAGTCAACTGTAAAGGATTGAGCTATGGAATGTTTACATCTGAA
ATATTTTTCATTTTTGATTTTCAAATTTCAGAAAGGCAATGCGTCAAACC
AAAATGATAACACGCAAATCAAAGTTTTTCATTGGAATTTGACGAACAAA
GATGATTTTTTGTACAATGGTGCAACTCCTAAGGTATTTTTGTCTACCTA
CATTTTGTACGGAAAATAAATAGATCAACATCTCTGTACACCCCCTTCTC
GCAGACCCGGTGGGTTCTCTCGTCTCCCATTAGAAAAAAATTGGCCAAAG
CATCGTCCTCAGTGGAGAGCCATACTCCAATTTTTGTCTCCGCTGAAAAT
AATCAAATAAGTAAATCCTCACTGCAAAATATTGTGCCTTTTTTCCATCA
CCTGACTTGAAAATAATTAAATTCGAATCCCCAGCCATAAATAAACATGG
GAATATCAGTCCCCATCGAGTTTCAATTCCGTTATTTCTACTCACTGGCG
GAAAAAGTCTTACCGAGTCTGTGAGAAGGTGGTATCTCTGAGTAGTACAC
GCTTTTTTATTAGAAATAATTTGTGGCTCAATTTTGGTTTAAACTAAGAA
AAAATTAAGAACAATTCTATGTTTGAAAAATAGCTGATAAAATACTATTT
TTAAGCTTCTTTTAAGTGAATAAGGGAATAAAGTAATGATACAAAAATCA
AAAACATTTTGTGAACATTTAAACCTGAAAATCAACAAAAATAACAACAG
TCAAGAGTTAGACAATTTTTTCTTCTTATGAAAAAACGTATTTAAAAAAA
GCTATCAATCTTAGTATCCATTATTTTTATGAGGGAGGCTACACCTTTCG
AAACATCGGATATCGGAAATTTCCTCCAGGAAGAGGGGGGTAGCTTCCTT
CCTTTTTTCGTCAGAATTGTGAATTTTTTGGACGTGGAGGTTATGGAGGT
TCATATTACCCTTTCCCTTTTTACGGAAATTTACTATACTGTTAATGAAG
TGTTCAGCAATTATTAAAAAAGCGGACAAATATTTCAATCTCCTAAACCA
ATTCAATCATCTTGGGAATTGATCTAATGATATCAATTGGTTGAAGAGAG
ATTCTATTTCAGTTATTTTAAGCCCATTTTAGATAATGAGTTCTGAGGAT
TACATTTTATATACAAAGGTGTCCGCTTTTTTTCGGACACACTGTAGACG
CCATTACCAGGTCGGGAGATCATTTAATAAAGGGTTCATAGTATTAATTT
ACTTTATTTTTCTTCGGTTTCAGTTCGAAGAAATTGGACCTTACGTTTAC
ACATTTGGTGGCGAAAAAGCGAATATTCAGTTCACCCGTGAAACCGCACG
CTATAAATCCATATTCAAGACGTCATTCAGCTCCAAATTAACCAAGCAAT
TCTGTCCGCGTTGCCAAGAAGATGATATGGTGAGACAATCTTTGTCAATC
AGTTTTTGTCAAAAAGAAAATTTCCCTCCTCCTTCAATGATCTATAGAAA
ATCAGGGTCAACTATCCCTAATCCGAGCCTTATTTATTATTATTCGAATT
TTACTACAATATTGGTCCCTTCAGCTGAAAAGTGGTTCAAATTACTCTAC
GTAATTCGAATCTTTCTCTAATTCGAAAGAAATATTTTTTTCCCTTGAAG
ATCGAATTAGAGAGAGTCAACTACTTCTTGCAAAGGTCGATTAATATTGA
ATTATAATATTAAATACCTTTAAGGAAGAAATTTTGGCGGGAATTTAATT
TGGCGGATGGCCGAAAAAGTTTTTTAGAGGGGATTTAATTTGGCGAACGG
ACGAAAAAACTAAATTTGGCGTTTGCTGAAAAATTTATCCTTAAAATGAC
GTAAAAACAGCAAAAAAAATGCAAAAACACCTTAAAAGAGATCATATTTT
CAAAAAGTTTAATTTGGCGGGAATTTAATTTGGCAGATGGTGGAAAAAAG
AAATTTTGGCGGGAACTTAATTTGGGGGATTCTGGCCAAATCCGCCAAAT
TTTCTTTCCGCCAAAATTTCTTCCTTTAAGGTATTAAATATTGAGACGGT
GAAATTCAATCCTGAAACTCGATCTTTTATCTAACGGAGATTGTTATGTC
CATTTCTTCTAAAAGAGTCCATTTCTTGATAATGTTTTATATTTTCTTCA
GTTTGTGAATGTCAACATGGGTTACATTGGTGTCCTTCAAATGACTGGTG
CGGAAGATGTCCTCGCTTATTCACTTATCCCACCCATCATTGGCAAGCTT
CTCCTAGATGCTAATGATGGAAACCTGTCAACGACTTACCAGAGTATCGG
AATGGCTGGTCAATCCGTATTACCCGCAAACGTTTTACCTAATGATTTCA
AAATCGATTTTTCTGCTTTCCTGAGTAATGTCATGAATGTTTCATCAGCC
TCTATCCAATACACTGAAACTCAAATGCGAGGGCTTTACAATGTGGTTAC
CAATGCGACGCTTCTGGGTGTCAGCGGTGCCGCTCCATCAGCCAATTGTT
CTACAGATCCATCACAAGCTGATTGTCTACAAATGGGTTTTTTAGTACTA
GCAAATTGGATGAGCGTTCGGTCAGCTGAAGTTGTAGCTGACGGTAAAAA
CGTTACAGACGATGCCACTTTCCTGGCATTGTATGGAGCTATTGGTGCCT
TGTTTTGTCCAAATACTACATACACTTGCCTGGATACCGTATCAGATGTA
AATATGATTGGTTACATTGTAGGCTACGTGACTCAATATTTACCACAAAT
AGTTATCGAACTAGCTATTGATCATAAAAATTACGGGCTTTTAACACAGA
GAACACACAAGGAGATTGCGTCGGGTTACTTTTTGACTGAACTAGTATTT
CCAGGTTTTGAGAGGGGGATTCCGGTACCCGGTTTTGTACCTAATGATGC
GGACGTAGATGAAGCGCTAAAAACAAAACTCTACAATGAAGTGTACACAT
GTGGTGTTCCTTCTAAAACAGAGTTCACATGGGCAAGTAAGTAGATTTCA
GTAGATAGTAGATTTTACCTTTTTCAAANNNNNNNNNNNNNNNNNNNNNN
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AATTTTGAATCAGATACATTCAAAAAAAATTTTTCAGATTTTTTTTGCTT
TAATTTTTGAAATTGACCATCGTGTACCCTTAAGCTATAATTTTCACTTT
AATCGATTTTATGAGATTCTATGTGATGTTAATATGGAACTTGATTGATG
TGTACCTTAAGTGAATTGATTTCGGGGATTAAATTTTGAGAATTTGGCGG
GATTTTCGTAAAATGAGCCAAATTAAAAACACTAAAATTTTGAAAATTGA
CTACCTGTAAACTTAAATACCCGCAGAATTTAGCAAAAATCTTTTTAGGA
TAGAAATTCTATATGAAATCAGCATTTTTAAGTACTATCTGTCAAAAAAC
CAAGTGATGTTTTATTTACAATTGCTTAAATTTCCCCATCCGCCAAATCA
AATCCCCGCAAAATTATACAAATTCTGCCATTCGCCAAATTAAATACTTA
CCGTCAAATCAAGTACACGCCAAATTTAATATTTTTCTTTTTATATTTCT
TTTGCAGAAGCTGATGATGCCAGTTCCGTACCATCATCATATTTTCCTGG
TGCGTCTAAAGAATTCTTAGAGATAGACAGTAAATTCACTGCCACATATT
TCGGCACCAAACCCAATCTAGATATCTGTAAAACACGTCAATCAGCACCA
CACGAATCATATAAAGTCTATGATAATACTCTTAAAGGAACCTACATATT
ACGTAGAACATTACAAAGGGATTATCTTGGTGTTAATGTCCATGACTATG
AAATGGATCTAGAGGAACTTTACAAGGTTGATGATGTGGCTGTTTTCACA
CGTGGTTTACGAGATATGACCAAAAGTAAAAATAATGTCCCCATGCTGTT
CAGTCAACCACATTACTTAATGGCAGAGAGTATCATTTCGGACACCCTTG
GAATGAAGCCGGACAAAATTAAACATCAAAGCCTGGTATGTCTTTATTTT
TTATATGAATTTTTTTTGTTTTTAGAAAAAATTTTCTCTAGAAATTATTT
TTTCTTGGCTATTGTTATCAACAGAAGCTTTGTAAGGCCGTGCTGAGAAA
TTTTTTGTCTTAGTCTGAATCGCAGACCTCTACGAAACTGCAGGTAGTAT
AAAAGGAGCACGAATCCGTTAGTGGATGCAAGCAGCCTACTTTTGTTTGG
AAAAAGTGACGAATTTTTTTGTCACAAGACGAAATTCTTACATCTTGTCA
GAGAACTAAAACTCAGGTCATCGAGAAGTCATGTGAAAATGTCAATGTGG
GGAGGTGTTTATTTGTTCTACAATACGTAGCGTTATTTGGAAGTCGCACA
TAAGGTCTACCTATAGCATTGGCTCTACAACTGCAATTTCTCCATAGCCT
CGAGGAAATTTTCGTGCTTCATTTCGAATGAAATAGATAACTTTCTCAAT
ATCTTTTCCATTTTATCCCAATTCTATCCTAAAAATTTTCACATTATATT
TCTCATTCTATCCCAGCATTCAATAGAACCGATCACTGGGTCAGCAATCG
AAGTTGTCAACCGTTTACAACTCAATACATAT

Coding sequence (CDS) from alignment at sc0000424:1..17832-

>TCONS_00022535 ID=TCONS_00022535|Name=TCONS_00022535|organism=Clytia hemisphaerica|type=CDS|length=3585bp|location=Sequence derived from alignment at sc0000424:1..17832- (Clytia hemisphaerica)
ACTTGGCCGATAACTTGTTGTATTGGGGCGCTATCGGGACAAATAGTGGG
ATTATGTTTTTCCATTTTGTCATGTGTGGGTGTTATACCAAGTAGCCCGC
CGAACTGGAAAAATAAGATCACTTAAATATGTACAGGATTCATTATCAGA
CTGTATCAAAATGGTGTCAGCATTTACAGTGATAGGGGCATGGGCAGGAG
CTTTCCCAATACCTTTGGACTGGGATCGAGATTGGCAGAAATGTAGATGA
AACGTTTTCATTTTCAATGTTGTGTTCTGCATTGACCGTTGTTCCATTGT
TTATCACTCATGATGGACGTTGGGATGATTTCCTGAGCTATCTTCCTGAA
ACTACGTGATGTTGTTGGTATTTACATTGGCGTCATTTCTTGCTGGTTCA
GTCCTGTTTCACGTGGTATCGATACTACTTGGAGCTCCTCTTATTGACAG
AGAAAAAAATATAATAGAAAAATCAAAATAAATAAAAAAATGGAGATTAA
AGAAGCCTGTTTATCCTACTCCATCGTCAGCCTGGTGTATCAAATTACTA
TCATTACCATTATGTATTTGTGTAACATCTCACCAATTAGTTCGAAAAGT
ATTACAACTTTTCTCATGGTTTTTATACCCCTGTCAATGATAGGATGTTA
TGTTTTGATCAAGTTGCTTCACTCCAAAGTTTCAAGTATCAAGAAAAGAA
AAGACAGCTTTTCAGAGACTTGGCCGATAACTTGTTGTATTGGGGCGCTA
TCGGGACAAATAGTGGGATTATGTTTTTCCATTTTGTCATGTGTGGGTGT
TATACCAAGTAGCCCGCCGAACTGGAAAAATAAGATCACTTAAATATGTA
CAGGATTCATTATCAGACTGTATCAAAATGGTGTCAGCATTTACAGTGAT
AGGGGCATGGGCAGGAGCTTTCCCAATACCTTTGGACTGGGATCGAGATT
GGCAGAAATGTAGATGAAACGTTTTCATTTTCAATGTTGTGTTCTGCATT
GACCGTTGTTCCATTGTTTATCACTCATGATGGACGTTGGGATGATTTCC
TGAGCTATCTTCCTGAAACTACGTGATGTTGTTGGTATTTACATTGGCGT
CATTTCTTGCTGGTTCAGTCCTGTTTCACGTGGTATCGATACTACTTGGA
GCTCCTCTTATTGACAGAGAAAAAAATATAATAGAAAAATCAAAATAAAT
AAAAAAATGGAGATTAAAGAAGCCTGTTTATCCTACTCCATCGTCAGCCT
GGTGTATCAAATTACTATCATTACCATTATGTATTTGTGTAACATCTCAC
CAATTAGTTCGAAAAGTATTACAACTTTTCTCATGGTTTTTATACCCCTG
TCAATGATAGGATGTTATGTTTTGATCAAGTTGCTTCACTCCAAAGTTTC
AAGTATCAAGAAAAGAAAAGACAGCTTTTCAGAGACTTGGCCGATAACTT
GTTGTATTGGGGCGCTATCGGGACAAATAGTGGGATTATGTTTTTCCATT
TTGTCATGTGTGGGTGTTATACCAAGTAGCCCGCCGAACTGGAAAAATAA
GATCACTTAAATATGTACAGGATTCATTATCAGACTGTATCAAAATGGTG
TCAGCATTTACAGTGATAGGGGCATGGGCAGGAGCTTTCCCAATACCTTT
GGACTGGGATCGAGATTGGCAGAAATGTAGATGAAACGTTTTCATTTTCA
ATGTTGTGTTCTGCATTGACCGTTGTTCCATTGTTTATCACTCATGATGG
ACGTTGGGATGATTTCCTGAGCTATCTTCCTGAAACTACGTGATGTTGTT
GGTATTTACATTGGCGTCATTTCTTGCTGGTTCAGTCCTGTTTCACGTGG
TATCGATACTACTTGGAGCTCCTCTTATTGACAGAGAAAAAAATATAATA
GAAAAATCAAAATAAATAAAAAAATGGAGATTAAAGAAGCCTGTTTATCC
TACTCCATCGTCAGCCTGGTGTATCAAATTACTATCATTACCATTATGTA
TTTGTGTAACATCTCACCAATTAGTTCGAAAAGTATTACAACTTTTCTCA
TGGTTTTTATACCCCTGTCAATGATAGGATGTTATGTTTTGATCAAGTTG
CTTCACTCCAAAGTTTCAAGTATCAAGAAAAGAAAAGACAGCTTTTCAGA
GACTTGGCCGATAACTTGTTGTATTGGGGCGCTATCGGGACAAATAGTGG
GATTATGTTTTTCCATTTTGTCATGTGTGGGTGTTATACCAAGTAGCCCG
CCGAACTGGAAAAATAAGATCACTTAAATATGTACAGGATTCATTATCAG
ACTGTATCAAAATGGTGTCAGCATTTACAGTGATAGGGGCATGGGCAGGA
GCTTTCCCAATACCTTTGGACTGGGATCGAGATTGGCAGAAATGTAGATG
AAACGTTTTCATTTTCAATGTTGTGTTCTGCATTGACCGTTGTTCCATTG
TTTATCACTCATGATGGACGTTGGGATGATTTCCTGAGCTATCTTCCTGA
AACTACGTGATGTTGTTGGTATTTACATTGGCGTCATTTCTTGCTGGTTC
AGTCCTGTTTCACGTGGTATCGATACTACTTGGAGCTCCTCTTATTGACA
GAGAAAAAAATATAATAGAAAAATCAAAATAAATAAAAAAATGGAGATTA
AAGAAGCCTGTTTATCCTACTCCATCGTCAGCCTGGTGTATCAAATTACT
ATCATTACCATTATGTATTTGTGTAACATCTCACCAATTAGTTCGAAAAG
TATTACAACTTTTCTCATGGTTTTTATACCCCTGTCAATGATAGGATGTT
ATGTTTTGATCAAGTTGCTTCACTCCAAAGTTTCAAGTATCAAGAAAAGA
AAAGACAGCTTTTCAGAGACTTGGCCGATAACTTGTTGTATTGGGGCGCT
ATCGGGACAAATAGTGGGATTATGTTTTTCCATTTTGTCATGTGTGGGTG
TTATACCAAGTAGCCCGCCGAACTGGAAAAATAAGATCACTTAAATATGT
ACAGGATTCATTATCAGACTGTATCAAAATGGTGTCAGCATTTACAGTGA
TAGGGGCATGGGCAGGAGCTTTCCCAATACCTTTGGACTGGGATCGAGAT
TGGCAGAAATGTAGATGAAACGTTTTCATTTTCAATGTTGTGTTCTGCAT
TGACCGTTGTTCCATTGTTTATCACTCATGATGGACGTTGGGATGATTTC
CTGAGCTATCTTCCTGAAACTACGTGATGTTGTTGGTATTTACATTGGCG
TCATTTCTTGCTGGTTCAGTCCTGTTTCACGTGGTATCGATACTACTTGG
AGCTCCTCTTATTGACAGAGAAAAAAATATAATAGAAAAATCAAAATAAA
TAAAAAAATGGAGATTAAAGAAGCCTGTTTATCCTACTCCATCGTCAGCC
TGGTGTATCAAATTACTATCATTACCATTATGTATTTGTGTAACATCTCA
CCAATTAGTTCGAAAAGTATTACAACTTTTCTCATGGTTTTTATACCCCT
GTCAATGATAGGATGTTATGTTTTGATCAAGTTGCTTCACTCCAAAGTTT
CAAGTATCAAGAAAAGAAAAGACAGCTTTTCAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012632XLOC_012632Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022535-exon-sc0000424-1575043694:17561..17832TCONS_00022535-exon-sc0000424-1575043694:17561..17832Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1575043694:15043..15134TCONS_00022535-exon-sc0000424-1575043694:15043..15134Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1575043694:14449..14565TCONS_00022535-exon-sc0000424-1575043694:14449..14565Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1575043694:11219..11330TCONS_00022535-exon-sc0000424-1575043694:11219..11330Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1575043694:10343..10493TCONS_00022535-exon-sc0000424-1575043694:10343..10493Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1575043694:598..1025TCONS_00022535-exon-sc0000424-1575043694:598..1025Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1575043694:1..66TCONS_00022535-exon-sc0000424-1575043694:1..66Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1510915933:17561..17832TCONS_00022535-exon-sc0000424-1510915933:17561..17832Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1510915933:15043..15134TCONS_00022535-exon-sc0000424-1510915933:15043..15134Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1510915933:14449..14565TCONS_00022535-exon-sc0000424-1510915933:14449..14565Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1510915933:11219..11330TCONS_00022535-exon-sc0000424-1510915933:11219..11330Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1510915933:10343..10493TCONS_00022535-exon-sc0000424-1510915933:10343..10493Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1510915933:598..1025TCONS_00022535-exon-sc0000424-1510915933:598..1025Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1510915933:1..66TCONS_00022535-exon-sc0000424-1510915933:1..66Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1491911889:17561..17832TCONS_00022535-exon-sc0000424-1491911889:17561..17832Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1491911889:15043..15134TCONS_00022535-exon-sc0000424-1491911889:15043..15134Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1491911889:14449..14565TCONS_00022535-exon-sc0000424-1491911889:14449..14565Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1491911889:11219..11330TCONS_00022535-exon-sc0000424-1491911889:11219..11330Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1491911889:10343..10493TCONS_00022535-exon-sc0000424-1491911889:10343..10493Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1491911889:598..1025TCONS_00022535-exon-sc0000424-1491911889:598..1025Clytia hemisphaericaexon
TCONS_00022535-exon-sc0000424-1491911889:1..66TCONS_00022535-exon-sc0000424-1491911889:1..66Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022535-proteinTCONS_00022535-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000424supercontigsc0000424:1..17832 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.7158	55.4415	33.9623	29.6746	4.65639	4.80919	12.3426	13.1137	7.79631	8.27728	10.1343	9.26051	7.2456	7.88332	6.62366	7.38089	7.22514	9.32055	6.89422	6.93828	9.54247	9.14884	33.5568	27.1807	8.16859	9.06273	6.22459	5.2966	16.645	20.1343
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009580GPI_biosynthesis_protein_Pig-F
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006506 GPI anchor biosynthetic process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
Blast
[Close]
BLAST of TCONS_00022535 vs. Swiss-Prot (Human)
Match: PIGF (Phosphatidylinositol-glycan biosynthesis class F protein OS=Homo sapiens GN=PIGF PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.809e-21
Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 3 
Query:  228 SKVSSIKKRKDSFSEVMLLVFTLASFLAGSVLFHVVSILLGAPLIENVDETFSFSMLCSALTVVP---LFITHDGRWDDFLSYLPETTYVQDSLSDCIKMVSAFTVIGAWAGAFPIPLDWDRDWQTWPITCCIGALSGQIVGLCFSIL 662
            SK SS+  +   F +  +       FL     FHV+ +L GAPLIE   ETF F+++ S  T VP   L   +   W    S    T+  ++SL   I  +S+F  +GAW GA PIPLDW+R WQ WPI+C +GA  G + GL  S L
Sbjct:   68 SKRSSLSHKVTGFLKCCIY------FLMSCFSFHVIFVLYGAPLIELALETFLFAVILSTFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQ--ITTISSF--VGAWLGALPIPLDWERPWQVWPISCTLGATFGYVAGLVISPL 205
The following BLAST results are available for this feature:
BLAST of TCONS_00022535 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIGF3.809e-2139.86Phosphatidylinositol-glycan biosynthesis class F p... [more]
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