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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022576 ID=TCONS_00022576|Name=TCONS_00022576|organism=Clytia hemisphaerica|type=transcript|length=1023bp
ATGCTGAACAACGCAATCCTTCATTTTTGTTAAGCATTGGATATCTTCAA
CAATGACTCGTTGAACCAAAGTGATATAATCAGATCGTTGTTTCTTGTGA
TCATCTTTATCAAAAAGGAACTCTCCATTTGGAACATCATTCAGCTTTCT
TCTTGGAGAATCAGTGCTCAAATCATTACCACCAACTCTATTCATCACAT
ACGCCTTAACACAATCATATTTACCTCGTCACCAGTTAGTGTACATTCTT
CAAGATGTTTCTGATGGAGCTTCTTGCTTTCAAAATTGATGCTCCTCTTT
AATGGACTATCGTGACCTTTACCATACTCAACAAGTTTACGATAATGTGT
ACGATGAGAAACAGCAAGCCGAAGTGTCTTCAGTCTGATTATCGAGCTCT
TAAAAAGAAAGGAACCTCAGGAGGGGGTGAGATGAGATGCATTCTTGATA
ATGGAGTGGATGGTGGAGACATTAAACAGATGGTTGTTTCATTTCCACTG
GTTGCATTTTCCATCGGTCGTGGCGATGTTATGGAGGATAATGTTACATC
AGATGGTGATAGTGGAATCTTTGATAATGGAGTTGATTGAGGTGACATTA
AGCTGGTAGCTGTTTTTCCATTTGCATTGGTACCATTTCTCAACGGTGGT
GGTGATGCTATCGGTGATGGTGATTTCAAAGGCAAAAATGATCCGTCAGA
AGGTGATTGTGATACTGAAAGTGATTGTGATGGGAAAACTGGCATTGGTG
GCAAATGATGATTGGGGATGACTTTACTATTTGCTTTAATGAGTTCATCA
AGTTTTTTGTTAGCATCTGCTAGTGTAAATCTACATTGTTGTCTTTTTTG
AAGCAATTTTTTGCAAGTTAGGCAGATATAAGGACTTGAAttgattattt
tgattcccAGAGAATTAAGTTCCTCACGTGGCGAGAATTTCTTTGAGTCT
GAATCTATATAATTGAAATCTTGTTTTGATGTAATATTCTTTCGACAAAT
GTGACAAGATTTTaacattttgg Run BLAST on NCBI transcript from alignment at sc0000427:132532..134959- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022576 ID=TCONS_00022576|Name=TCONS_00022576|organism=Clytia hemisphaerica|type=transcript|length=2428bp|location=Sequence derived from alignment at sc0000427:132532..134959- (Clytia hemisphaerica)
ATGCTGAACAACGCAATCCTTCATTTTTGTTAAGCATTGGATATCTTCAA
CAATGACTCGTTGAACCAAAGTGATATAATCAGATCGTTGTTTCTTGTGA
TCATCTTTATCAAAAAGGAACTCTCCATTTGGAACATCATTCAGCTTTCT
TCTTGGAGAATCAGTGCTCAAATCATTACCACCAACTCTATTCATCACAT
ACGCCTTAACACAATCATGTGAGTCAACATTTTGATTTTCTTCAGTCATA
TCACTGACTTTGATGACAACATCAACATTGTCAAATATCACCTGAAATAT
ATTGCAAGATCATTCAATATTATAGGGTTTAAGAATTTTATGCTCTAATA
ATACTAAATAAATACTAAATGTGAAATTTTGTAATGTGATTTTGGTCACT
ATAGACTAATAGATTAGTTTGCACATAAAAGCAGACTGGTATTTTACCAA
GCACAGAATTTTATGTTTTTGGCAAAACCAAACAATCTTATAGAAAATTT
TAGGCAATTTTAACCTTGGCACCATTCTTATGTTCTTCACTGTCTTCATC
TTCATCCTCATCTTCTCCATCTTCATCGTTGACTTGATTGTCGTGATTTC
CCTTAATCGGACTCAGTGGATCTAAAAAAGCAAATAATGTGTTGATTTTT
TTCTCTTTTTTACTTGTTCTTTTGTAAAATAGTTGCTATAATTTTTGAAA
TATAGTTGATTGTCTTTTCTGAATAAAAACAATTATTACCGTCTCCAGAG
ATCACATCATCCTGATTTCGTCTTCCTTGCTTTTTTGTTGGACTAGAACC
TAGTTATGAAAAAAATTTAAGTATTAATATTATCAGTAATTGTTGGATTG
CTGGTTAGGTAAAGACTGTTATTGGAAAGCATTTTGAAAAATGACACTTC
AAGAATTCAGCAGGCAATTTTTGGTTGATAAGAAATAATCTTTATCTTAC
ATTTGACATCATCAAAATCTTTCTTTCCGCTCTTCTCTTGACCTTCCAAT
AGTGATTTCTAAACAAATTAAACAAATGGCATATATAATTTGATATTTCC
CCTTCAGTTAGTGTAGTTAAACCTCCCCCTGCAAAAAAAATTATCAATTC
GCCAAATACTGATTTAATTATTATGATTTTGTTATAGATTTACCTCGTCA
CCAGTTAGTGTACATTCTTCAAGATGTTTCTGATGGAGCTTCTTGCTTTC
AAAATTGATGCTCCTCTTTAATGGACTATCGTGACCTTTACCATACTCAA
CAAGTTTACGATAATGTGTACGATGAGAAACAGCAAGCCGAAGTGTCTTC
AGTCTGATTATCGAGCTCTTAAAAAGAAAGGTGAGTTAATTTTTGAATTT
ATGTACCTTTAAAAATTATTGATATTGAGTGTCTATTTGCAGCACCAGGT
AGCACCCACCTGCATCCACATCAATTGTCAAGATAATTATTGGTATAGCA
AAAGTGAACTAAGCAATGTTGGTTTTATGAAAGCACATTTTAGTTTTGTT
NCTCTTTTATTGACGTCAAAAAGTGACGTCAAACCCCCGGATTCGAAAAA
CGTCAATTCTTACAACATCAATTCTGCGCGATGTGTAGATTCTTTTTCAA
TTTCTTTTAAAAAATGAGGGATGAGTTGTTCACGGACATTCTTGTTGCTC
CAAGCTGATTTGGCAATTGATTTGGGATTTTCCTTAAGTAAAGCAAGAGC
AATCGGGTTCAAAGAAGAGTCAATTTTACGGTCCTTTATCTGTCCAGAAG
GCCAAAAAACTTTTAAATTGATTTCAGTGGATGCTTGATTGTCTAATTTC
ACTTTTTTGTTATTAGGAACCTCAGGAGGGGGTGAGATGAGATGCATTCT
TGATAATGGAGTGGATGGTGGAGACATTAAACAGATGGTTGTTTCATTTC
CACTGGTTGCATTTTCCATCGGTCGTGGCGATGTTATGGAGGATAATGTT
ACATCAGATGGTGATAGTGGAATCTTTGATAATGGAGTTGATTGAGGTGA
CATTAAGCTGGTAGCTGTTTTTCCATTTGCATTGGTACCATTTCTCAACG
GTGGTGGTGATGCTATCGGTGATGGTGATTTCAAAGGCAAAAATGATCCG
TCAGAAGGTGATTGTGATACTGAAAGTGATTGTGATGGGAAAACTGGCAT
TGGTGGCAAATGATGATTGGGGATGACTTTACTATTTGCTTTAATGAGTT
CATCAAGTTTTTTGTTAGCATCTGCTAGTGTAAATCTACATTGTTGTCTT
TTTTGAAGCAATTTTTTGCAAGTTAGGCAGATATAAGGACTTGAATTGAT
TATTTTGATTCCCAGAGAATTAAGTTCCTCACGTGGCGAGAATTTCTTTG
AGTCTGAATCTATATAATTGAAATCTTGTTTTGATGTAATATTCTTTCGA
CAAATGTGACAAGATTTTAACATTTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022576-exon-sc0000427-1575043694:134742..134959 | TCONS_00022576-exon-sc0000427-1575043694:134742..134959 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1575043694:133630..133822 | TCONS_00022576-exon-sc0000427-1575043694:133630..133822 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1575043694:132532..133143 | TCONS_00022576-exon-sc0000427-1575043694:132532..133143 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1510915933:134742..134959 | TCONS_00022576-exon-sc0000427-1510915933:134742..134959 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1510915933:133630..133822 | TCONS_00022576-exon-sc0000427-1510915933:133630..133822 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1510915933:132532..133143 | TCONS_00022576-exon-sc0000427-1510915933:132532..133143 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1491911889:134742..134959 | TCONS_00022576-exon-sc0000427-1491911889:134742..134959 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1491911889:133630..133822 | TCONS_00022576-exon-sc0000427-1491911889:133630..133822 | Clytia hemisphaerica | exon |
| TCONS_00022576-exon-sc0000427-1491911889:132532..133143 | TCONS_00022576-exon-sc0000427-1491911889:132532..133143 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000427 | supercontig | sc0000427:132532..134959 - |
Blast
The following BLAST results are available for this feature:
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