|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022597 ID=TCONS_00022597|Name=TCONS_00022597|organism=Clytia hemisphaerica|type=transcript|length=779bp
AAAGAAcgtattattttgaataaattcgATTTTAGCATGTTTTTCCATCT
TACACATTTCGAATTCATTTTATTCAGTTTTATTAcagaaaaagagaaat
aaaaacagaagaattcaaaaaatatttacgaTTTTATGGTATTGAATGCT
GCAATGACAAGTGCTTTAGAATATTTGAATACCAATTCTTCTGATGCGTT
AACGTCTTTCATTGGTGATCCTGGCACAGATCTGGCGTTCAGAAACGTTC
TAGCTTGGGACAATGTACCAATATCTCCAGCAGACTCGATGTTATAAATC
AACAAGTCACCAACTGCAAATATTCTGGTCAATGACGATGTTCCATTTCC
AGGGACATATTGGTGCAAATGCTTCATGATCATGTATATGCCTCGATTGG
TGTTTTCGTTTTCTTGGATGATACCAACTGAAGTCTAAATGTTCATCATA
TGCGTGCGAAATATACGTTGGAACAAATTTCTTCATCCAACTTAGACCAG
GGATGTTTTTGATCAGGTCTCTCGCCATCAAGATCTTGAACTCTTTACGA
AGTTGGATATCGTCTTTCTCTGATGGAAAGCATAACGTAATGTCTGGTGC
TGGGTTGTCGTCAGTGGTTAAATGTTTGAGAGCGTCTGGAATCGGAATGC
GACATTTAACCTttggttgaaaatgaagaaaaaacaattttatcagataa
aaatagtaaaaagtaattatatcaaataaaaatattgtgaATTAATGAAT
TACTGTATGAAACTTTCTGCAAAACCGAC Run BLAST on NCBI transcript from alignment at sc0000428:112543..113950- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022597 ID=TCONS_00022597|Name=TCONS_00022597|organism=Clytia hemisphaerica|type=transcript|length=1408bp|location=Sequence derived from alignment at sc0000428:112543..113950- (Clytia hemisphaerica)
AAAGAACGTATTATTTTGAATAAATTCGATTTTAGCATGTTTTTCCATCT
TACACATTTCGAATTCATTTTATTCAGTTTTATTACAGAAAAAGAGAAAT
AAAAACAGAAGAATTCAAAAAATATTTACGATTTTATGGTATTGAATGCT
GCAATGACAAGTGCTTTAGAATATTTGAATACCAATTCTTCTGATGCGTT
AACGTCTTTCATTGGTGATCCTGGCACAGATCTGGCGTTCAGAAACGTTC
TAGCTTGGGACAATGTACCAATATCTCCAGCAGACTCGATGTTATAAAGT
AAGTGCCAAATTACCTTTGAAAAGAGAAATTTTAAATATGGATTATAGCT
TGTTATTTTACAAGTCAACCCAATATTATGTTATAGTCAGATATATACTC
ATTTAATTACAAAATGTTTATATACCCTGATATACCTCTAGAAAATTCCC
ATACAAATGGAAATCAGCAAGGGCAGGTATCAGTCCTTCCATGCGATGCT
CTGGTGTCCTACTGTCCGAAACAGCACATTGCACATTCTGGCTTCTAAAA
AACAAATTGATACAAAATATATATCTTATATAGAATTGTGCTAGCAGAGT
GTGTATAAAGGGTAAACCAAGCTCGTCACCCACAGGCTTTTAAAGTAATT
ATTTTTTACCTCTCAACAGTCAACAAGTCACCAACTGCAAATATTCTGGT
CAATGACGATGTTCCATTTCCAGGGACATATTGGTGCAAATGCTTCATGA
TCATGTATATGCCTCGATTGGTGTTTTCGTTTTCTTGGATGATACCAACT
GAAGTCTAAATGGTAAGGAGTAAAATTGAGACTCTTATCTGATAAATATA
GTCTATATAATCTGAGTGTAAGTTGGTGTTTGTCATATCCAATTATAATT
GATTCTGAACGTCTGACCCTCCTTGATGCATGATTTTCGTATTTTTATTA
GTACCTGTTTTCTTGTATCGTTTATCTTTAATACCGTTTTGTAAACATTG
AAAAGTTGAAATTAATAAACATGCTTTCAAACAGCTTCTAACATACTATT
TCTGATTTCTTTTTAACCAGTTCATCATATGCGTGCGAAATATACGTTGG
AACAAATTTCTTCATCCAACTTAGACCAGGGATGTTTTTGATCAGGTCTC
TCGCCATCAAGATCTTGAACTCTTTACGAAGTTGGATATCGTCTTTCTCT
GATGGAAAGCATAACGTAATGTCTGGTGCTGGGTTGTCGTCAGTGGTTAA
ATGTTTGAGAGCGTCTGGAATCGGAATGCGACATTTAACCTTTGGTTGAA
AATGAAGAAAAAACAATTTTATCAGATAAAAATAGTAAAAAGTAATTATA
TCAAATAAAAATATTGTGAATTAATGAATTACTGTATGAAACTTTCTGCA
AAACCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022597-exon-sc0000428-1575043694:113653..113950 | TCONS_00022597-exon-sc0000428-1575043694:113653..113950 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1575043694:113139..113281 | TCONS_00022597-exon-sc0000428-1575043694:113139..113281 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1575043694:112543..112880 | TCONS_00022597-exon-sc0000428-1575043694:112543..112880 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1510915933:113653..113950 | TCONS_00022597-exon-sc0000428-1510915933:113653..113950 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1510915933:113139..113281 | TCONS_00022597-exon-sc0000428-1510915933:113139..113281 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1510915933:112543..112880 | TCONS_00022597-exon-sc0000428-1510915933:112543..112880 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1491911889:113653..113950 | TCONS_00022597-exon-sc0000428-1491911889:113653..113950 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1491911889:113139..113281 | TCONS_00022597-exon-sc0000428-1491911889:113139..113281 | Clytia hemisphaerica | exon |
| TCONS_00022597-exon-sc0000428-1491911889:112543..112880 | TCONS_00022597-exon-sc0000428-1491911889:112543..112880 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000428 | supercontig | sc0000428:112543..113950 - |
Blast
The following BLAST results are available for this feature:
|
